Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
05:34:41 (3383195): wrapper (7.7.26015): starting
05:34:41 (3383195): wrapper: running run_atlas (--nthreads 4)
[2026-04-01 05:34:41] Arguments: --nthreads 4
[2026-04-01 05:34:41] Threads: 4
[2026-04-01 05:34:41] Checking for CVMFS
[2026-04-01 05:34:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-01 05:34:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-01 05:34:43] Running cvmfs_config stat atlas.cern.ch
[2026-04-01 05:34:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-01 05:34:43] 2.13.3.0 809741 8566 56876 157950 1 51 2108835 4096001 1763 130560 0 7774379 99.991 313599 711 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-04-01 05:34:43] CVMFS is ok
[2026-04-01 05:34:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-01 05:34:43] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-01 05:34:43] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-01 05:34:43] Further information can be found at the LHC@home message board.
[2026-04-01 05:34:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 05:34:43] Checking for apptainer binary...
[2026-04-01 05:34:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-01 05:34:43] Running /usr/bin/apptainer --version
[2026-04-01 05:34:43] apptainer version 1.4.5
[2026-04-01 05:34:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 05:34:43] T3500-Ubuntu
[2026-04-01 05:34:43] apptainer works
[2026-04-01 05:34:43] Set ATHENA_PROC_NUMBER=4
[2026-04-01 05:34:43] Set ATHENA_CORE_NUMBER=4
[2026-04-01 05:34:43] Starting ATLAS job with PandaID=7060551121
[2026-04-01 05:34:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 10:06:35]  *** The last 200 lines of the pilot log: ***
[2026-04-01 10:06:35] 2026-04-01 14:06:19,902 | INFO     | this job has now completed (state=finished)
[2026-04-01 10:06:35] 2026-04-01 14:06:19,902 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-01 10:06:35] 2026-04-01 14:06:19,902 | INFO     | log transfer has been attempted: DONE
[2026-04-01 10:06:35] 2026-04-01 14:06:19,902 | INFO     | job 7060551121 has finished - writing final server update
[2026-04-01 10:06:35] 2026-04-01 14:06:19,903 | INFO     | total number of processed events: 400 (read)
[2026-04-01 10:06:35] 2026-04-01 14:06:19,909 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/10/PanDA_Pilot-7060551121/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 10:06:35] 2026-04-01 14:06:19,910 | INFO     | extracted standard info from prmon json
[2026-04-01 10:06:35] 2026-04-01 14:06:19,910 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 10:06:35] 2026-04-01 14:06:19,910 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-01 10:06:35] 2026-04-01 14:06:19,910 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 10:06:35] 2026-04-01 14:06:19,910 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 10:06:35] 2026-04-01 14:06:19,915 | INFO     | fitting pss+swap vs Time
[2026-04-01 10:06:35] 2026-04-01 14:06:19,915 | INFO     | sum of square deviations: 5902093918.0
[2026-04-01 10:06:35] 2026-04-01 14:06:19,917 | INFO     | sum of deviations: -26556845258.999992
[2026-04-01 10:06:35] 2026-04-01 14:06:19,918 | INFO     | mean x: 1775044243.0
[2026-04-01 10:06:35] 2026-04-01 14:06:19,918 | INFO     | mean y: 2343468.205992509
[2026-04-01 10:06:35] 2026-04-01 14:06:19,918 | INFO     | intersect: 7989267421.66345
[2026-04-01 10:06:35] 2026-04-01 14:06:19,918 | INFO     | chi2: 2.099412261973663
[2026-04-01 10:06:35] 2026-04-01 14:06:19,919 | INFO     | sum of square deviations: 5576683165.5
[2026-04-01 10:06:35] 2026-04-01 14:06:19,921 | INFO     | sum of deviations: -10972899539.000004
[2026-04-01 10:06:35] 2026-04-01 14:06:19,921 | INFO     | mean x: 1775044090.5
[2026-04-01 10:06:35] 2026-04-01 14:06:19,921 | INFO     | mean y: 2350662.007633588
[2026-04-01 10:06:35] 2026-04-01 14:06:19,921 | INFO     | intersect: 3494996721.380061
[2026-04-01 10:06:35] 2026-04-01 14:06:19,922 | INFO     | chi2: 1.4386587419201617
[2026-04-01 10:06:35] 2026-04-01 14:06:19,922 | INFO     | current chi2=1.4386587419201617 (change=31.473261922950048 %)
[2026-04-01 10:06:35] 2026-04-01 14:06:19,922 | INFO     | sum of square deviations: 5263458688.0
[2026-04-01 10:06:35] 2026-04-01 14:06:19,924 | INFO     | sum of deviations: -11034230159.000006
[2026-04-01 10:06:35] 2026-04-01 14:06:19,924 | INFO     | mean x: 1775043938.0
[2026-04-01 10:06:35] 2026-04-01 14:06:19,924 | INFO     | mean y: 2350632.143968872
[2026-04-01 10:06:35] 2026-04-01 14:06:19,924 | INFO     | intersect: 3723524201.6988735
[2026-04-01 10:06:35] 2026-04-01 14:06:19,925 | INFO     | chi2: 1.4375865457613788
[2026-04-01 10:06:35] 2026-04-01 14:06:19,925 | INFO     | current chi2=1.4375865457613788 (change=0.0745274836582794 %)
[2026-04-01 10:06:35] 2026-04-01 14:06:19,925 | INFO     | right removable region: 256
[2026-04-01 10:06:35] 2026-04-01 14:06:19,925 | INFO     | sum of square deviations: 5576683165.5
[2026-04-01 10:06:35] 2026-04-01 14:06:19,927 | INFO     | sum of deviations: -56899057962.00001
[2026-04-01 10:06:35] 2026-04-01 14:06:19,927 | INFO     | mean x: 1775044395.5
[2026-04-01 10:06:35] 2026-04-01 14:06:19,927 | INFO     | mean y: 2357516.007633588
[2026-04-01 10:06:35] 2026-04-01 14:06:19,927 | INFO     | intersect: 18113186291.34516
[2026-04-01 10:06:35] 2026-04-01 14:06:19,928 | INFO     | chi2: 0.7997816407923773
[2026-04-01 10:06:35] 2026-04-01 14:06:19,928 | INFO     | current chi2=0.7997816407923773 (change=61.90449797409011 %)
[2026-04-01 10:06:35] 2026-04-01 14:06:19,928 | INFO     | sum of square deviations: 5263458688.0
[2026-04-01 10:06:35] 2026-04-01 14:06:19,929 | INFO     | sum of deviations: -51807404370.99999
[2026-04-01 10:06:35] 2026-04-01 14:06:19,930 | INFO     | mean x: 1775044548.0
[2026-04-01 10:06:35] 2026-04-01 14:06:19,930 | INFO     | mean y: 2355034.8793774317
[2026-04-01 10:06:35] 2026-04-01 14:06:19,930 | INFO     | intersect: 17473842155.018227
[2026-04-01 10:06:35] 2026-04-01 14:06:19,930 | INFO     | chi2: 0.7966611160208884
[2026-04-01 10:06:35] 2026-04-01 14:06:19,930 | INFO     | current chi2=0.7966611160208884 (change=0.3901720935225903 %)
[2026-04-01 10:06:35] 2026-04-01 14:06:19,930 | INFO     | left removable region: 20
[2026-04-01 10:06:35] 2026-04-01 14:06:19,931 | INFO     | sum of square deviations: 4075741535.0
[2026-04-01 10:06:35] 2026-04-01 14:06:19,932 | INFO     | sum of deviations: -24753282323.5
[2026-04-01 10:06:35] 2026-04-01 14:06:19,932 | INFO     | mean x: 1775044517.5
[2026-04-01 10:06:35] 2026-04-01 14:06:19,932 | INFO     | mean y: 2356724.2330508474
[2026-04-01 10:06:35] 2026-04-01 14:06:19,932 | INFO     | intersect: 10782769981.831423
[2026-04-01 10:06:35] 2026-04-01 14:06:19,932 | INFO     | chi2: 0.10266211466156912
[2026-04-01 10:06:35] 2026-04-01 14:06:19,932 | INFO     | current memory leak: -6.07 B/s (using 236 data points, chi2=0.10)
[2026-04-01 10:06:35] 2026-04-01 14:06:19,933 | INFO     | could have reported an average CPU frequency of 3199 MHz (13 samples)
[2026-04-01 10:06:35] 2026-04-01 14:06:19,933 | INFO     | ..............................
[2026-04-01 10:06:35] 2026-04-01 14:06:19,933 | INFO     | . Timing measurements:
[2026-04-01 10:06:35] 2026-04-01 14:06:19,933 | INFO     | . get job = 0 s
[2026-04-01 10:06:35] 2026-04-01 14:06:19,933 | INFO     | . initial setup = 7 s
[2026-04-01 10:06:35] 2026-04-01 14:06:19,933 | INFO     | . payload setup = 10 s
[2026-04-01 10:06:35] 2026-04-01 14:06:19,933 | INFO     | . stage-in = 0 s
[2026-04-01 10:06:35] 2026-04-01 14:06:19,933 | INFO     | . payload execution = 16245 s
[2026-04-01 10:06:35] 2026-04-01 14:06:19,934 | INFO     | . stage-out = 3 s
[2026-04-01 10:06:35] 2026-04-01 14:06:19,934 | INFO     | . log creation = 0 s
[2026-04-01 10:06:35] 2026-04-01 14:06:19,934 | INFO     | ..............................
[2026-04-01 10:06:35] 2026-04-01 14:06:20,000 | INFO     | 
[2026-04-01 10:06:35] 2026-04-01 14:06:20,000 | INFO     | job summary report
[2026-04-01 10:06:35] 2026-04-01 14:06:20,000 | INFO     | --------------------------------------------------
[2026-04-01 10:06:35] 2026-04-01 14:06:20,000 | INFO     | PanDA job id: 7060551121
[2026-04-01 10:06:35] 2026-04-01 14:06:20,000 | INFO     | task id: 49267393
[2026-04-01 10:06:35] 2026-04-01 14:06:20,000 | INFO     | errors: (none)
[2026-04-01 10:06:35] 2026-04-01 14:06:20,000 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 10:06:35] 2026-04-01 14:06:20,001 | INFO     | pilot state: finished 
[2026-04-01 10:06:35] 2026-04-01 14:06:20,001 | INFO     | transexitcode: 0
[2026-04-01 10:06:35] 2026-04-01 14:06:20,001 | INFO     | exeerrorcode: 0
[2026-04-01 10:06:35] 2026-04-01 14:06:20,001 | INFO     | exeerrordiag: 
[2026-04-01 10:06:35] 2026-04-01 14:06:20,001 | INFO     | exitcode: 0
[2026-04-01 10:06:35] 2026-04-01 14:06:20,001 | INFO     | exitmsg: OK
[2026-04-01 10:06:35] 2026-04-01 14:06:20,001 | INFO     | cpuconsumptiontime: 63991 s
[2026-04-01 10:06:35] 2026-04-01 14:06:20,001 | INFO     | nevents: 400
[2026-04-01 10:06:35] 2026-04-01 14:06:20,001 | INFO     | neventsw: 0
[2026-04-01 10:06:35] 2026-04-01 14:06:20,001 | INFO     | pid: 3399646
[2026-04-01 10:06:35] 2026-04-01 14:06:20,002 | INFO     | pgrp: 3399646
[2026-04-01 10:06:35] 2026-04-01 14:06:20,002 | INFO     | corecount: 4
[2026-04-01 10:06:35] 2026-04-01 14:06:20,002 | INFO     | event service: False
[2026-04-01 10:06:35] 2026-04-01 14:06:20,002 | INFO     | sizes: {0: 2280007, 1: 2280213, 11: 2280241, 16259: 2311746, 16262: 2320774, 16265: 2321152}
[2026-04-01 10:06:35] 2026-04-01 14:06:20,002 | INFO     | --------------------------------------------------
[2026-04-01 10:06:35] 2026-04-01 14:06:20,002 | INFO     | 
[2026-04-01 10:06:35] 2026-04-01 14:06:20,002 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/10
[2026-04-01 10:06:35] 2026-04-01 14:06:20,026 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,026 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,026 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,026 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,027 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,027 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,027 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,027 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,027 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 10:06:35] 2026-04-01 14:06:20,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,028 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 10:06:35] 2026-04-01 14:06:20,028 | INFO     | job 7060551121 has completed (purged errors)
[2026-04-01 10:06:35] 2026-04-01 14:06:20,028 | INFO     | overall cleanup function is called
[2026-04-01 10:06:35] 2026-04-01 14:06:21,036 | INFO     | --- collectZombieJob: --- 10, [3399646]
[2026-04-01 10:06:35] 2026-04-01 14:06:21,036 | INFO     | zombie collector waiting for pid 3399646
[2026-04-01 10:06:35] 2026-04-01 14:06:21,036 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 10:06:35] 2026-04-01 14:06:21,036 | INFO     | collected zombie processes
[2026-04-01 10:06:35] 2026-04-01 14:06:21,037 | INFO     | will attempt to kill all subprocesses of pid=3399646
[2026-04-01 10:06:35] 2026-04-01 14:06:21,219 | INFO     | process IDs to be killed: [3399646] (in reverse order)
[2026-04-01 10:06:35] 2026-04-01 14:06:21,276 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 10:06:35] 2026-04-01 14:06:21,276 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 10:06:35] 2026-04-01 14:06:21,281 | INFO     | did not find any defunct processes belonging to 3399646
[2026-04-01 10:06:35] 2026-04-01 14:06:21,284 | INFO     | did not find any defunct processes belonging to 3399646
[2026-04-01 10:06:35] 2026-04-01 14:06:21,285 | INFO     | ready for new job
[2026-04-01 10:06:35] 2026-04-01 14:06:21,285 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-01 10:06:35] 2026-04-01 14:06:21,286 | INFO     | **************************************
[2026-04-01 10:06:35] 2026-04-01 14:06:21,287 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-01 10:06:35] 2026-04-01 14:06:21,287 | INFO     | **************************************
[2026-04-01 10:06:35] 2026-04-01 14:06:21,287 | INFO     | 
[2026-04-01 10:06:35] 2026-04-01 14:06:21,288 | INFO     | architecture information:
[2026-04-01 10:06:35] 2026-04-01 14:06:21,288 | INFO     | executing command: cat /etc/os-release
[2026-04-01 10:06:35] 2026-04-01 14:06:21,311 | INFO     | cat /etc/os-release:
[2026-04-01 10:06:35] NAME="CentOS Linux"
[2026-04-01 10:06:35] VERSION="7 (Core)"
[2026-04-01 10:06:35] ID="centos"
[2026-04-01 10:06:35] ID_LIKE="rhel fedora"
[2026-04-01 10:06:35] VERSION_ID="7"
[2026-04-01 10:06:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 10:06:35] ANSI_COLOR="0;31"
[2026-04-01 10:06:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 10:06:35] HOME_URL="https://www.centos.org/"
[2026-04-01 10:06:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 10:06:35] 
[2026-04-01 10:06:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 10:06:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 10:06:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 10:06:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 10:06:35] 
[2026-04-01 10:06:35] 2026-04-01 14:06:21,311 | INFO     | **************************************
[2026-04-01 10:06:35] 2026-04-01 14:06:21,814 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/10
[2026-04-01 10:06:35] 2026-04-01 14:06:21,831 | INFO     | sufficient remaining disk space (406414426112 B)
[2026-04-01 10:06:35] 2026-04-01 14:06:21,832 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 10:06:35] 2026-04-01 14:06:21,832 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 10:06:35] 2026-04-01 14:06:21,832 | INFO     | update_server=False
[2026-04-01 10:06:35] 2026-04-01 14:06:21,832 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-01 10:06:35] 2026-04-01 14:06:21,832 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-01 10:06:35] 2026-04-01 14:06:21,832 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 10:06:35] 2026-04-01 14:06:21,833 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 10:06:35] 2026-04-01 14:06:21,833 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 10:06:35] 2026-04-01 14:06:21,833 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 10:06:35] 2026-04-01 14:06:21,834 | INFO     | aborting loop
[2026-04-01 10:06:35] 2026-04-01 14:06:21,834 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 10:06:35] 2026-04-01 14:06:21,834 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 10:06:35] 2026-04-01 14:06:21,881 | INFO     | all data control threads have been joined
[2026-04-01 10:06:35] 2026-04-01 14:06:21,937 | INFO     | all payload control threads have been joined
[2026-04-01 10:06:35] 2026-04-01 14:06:22,048 | INFO     | all job control threads have been joined
[2026-04-01 10:06:35] 2026-04-01 14:06:22,816 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 10:06:35] 2026-04-01 14:06:22,837 | INFO     | [job] retrieve thread has finished
[2026-04-01 10:06:35] 2026-04-01 14:06:22,838 | INFO     | [job] queue monitor thread has finished
[2026-04-01 10:06:35] 2026-04-01 14:06:22,839 | INFO     | [job] job monitor thread has finished
[2026-04-01 10:06:35] 2026-04-01 14:06:22,886 | INFO     | [data] control thread has finished
[2026-04-01 10:06:35] 2026-04-01 14:06:22,942 | INFO     | [payload] control thread has finished
[2026-04-01 10:06:35] 2026-04-01 14:06:23,039 | INFO     | [payload] validate_post thread has finished
[2026-04-01 10:06:35] 2026-04-01 14:06:23,052 | INFO     | [payload] failed_post thread has finished
[2026-04-01 10:06:35] 2026-04-01 14:06:23,053 | INFO     | [job] control thread has finished
[2026-04-01 10:06:35] 2026-04-01 14:06:23,081 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 10:06:35] 2026-04-01 14:06:23,321 | INFO     | [data] copytool_in thread has finished
[2026-04-01 10:06:35] 2026-04-01 14:06:23,913 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 10:06:35] 2026-04-01 14:06:23,942 | INFO     | [job] validate thread has finished
[2026-04-01 10:06:35] 2026-04-01 14:06:24,135 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 10:06:35] 2026-04-01 14:06:24,214 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 10:06:35] 2026-04-01 14:06:24,822 | INFO     | [data] copytool_out thread has finished
[2026-04-01 10:06:35] 2026-04-01 14:06:25,839 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 10:06:35] 2026-04-01 14:06:28,776 | INFO     | [monitor] cgroup control has ended
[2026-04-01 10:06:35] 2026-04-01 14:06:30,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125350846535488)>', '<ExcThread(monitor, started 125350189180672)>']
[2026-04-01 10:06:35] 2026-04-01 14:06:30,879 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 10:06:35] 2026-04-01 14:06:30,879 | INFO     | [monitor] control thread has ended
[2026-04-01 10:06:35] 2026-04-01 14:06:35,620 | INFO     | all workflow threads have been joined
[2026-04-01 10:06:35] 2026-04-01 14:06:35,620 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 10:06:35] 2026-04-01 14:06:35,620 | INFO     | traces error code: 0
[2026-04-01 10:06:35] 2026-04-01 14:06:35,621 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 10:06:35] 2026-04-01 14:06:35,756 [wrapper] ==== pilot stdout END ====
[2026-04-01 10:06:35] 2026-04-01 14:06:35,759 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 10:06:35] 2026-04-01 14:06:35,762 [wrapper] pilotpid: 3387859
[2026-04-01 10:06:35] 2026-04-01 14:06:35,765 [wrapper] Pilot exit status: 0
[2026-04-01 10:06:35] 2026-04-01 14:06:35,775 [wrapper] pandaids: 7060551121
[2026-04-01 10:06:35] 2026-04-01 14:06:35,811 [wrapper] cleanup supervisor_pilot 3449209 3387861
[2026-04-01 10:06:35] 2026-04-01 14:06:35,814 [wrapper] Test setup, not cleaning
[2026-04-01 10:06:35] 2026-04-01 14:06:35,817 [wrapper] apfmon messages muted
[2026-04-01 10:06:35] 2026-04-01 14:06:35,820 [wrapper] ==== wrapper stdout END ====
[2026-04-01 10:06:35] 2026-04-01 14:06:35,823 [wrapper] ==== wrapper stderr END ====
[2026-04-01 10:06:35]  *** Error codes and diagnostics ***
[2026-04-01 10:06:35]     "exeErrorCode": 0,
[2026-04-01 10:06:35]     "exeErrorDiag": "",
[2026-04-01 10:06:35]     "pilotErrorCode": 0,
[2026-04-01 10:06:35]     "pilotErrorDiag": "",
[2026-04-01 10:06:35]  *** Listing of results directory ***
[2026-04-01 10:06:35] total 473844
[2026-04-01 10:06:35] -rwx------ 1 whitlerd whitlerd     36322 Mar 22 00:32 runpilot2-wrapper.sh
[2026-04-01 10:06:35] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 23 17:53 pilot3.tar.gz
[2026-04-01 10:06:35] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 23 17:53 queuedata.json
[2026-04-01 10:06:35] -rw-rw-r-- 1 whitlerd whitlerd       100 Apr  1 05:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 10:06:35] -rwxr-xr-x 1 whitlerd whitlerd      7986 Apr  1 05:34 run_atlas
[2026-04-01 10:06:35] -rw-rw-r-- 1 whitlerd whitlerd       105 Apr  1 05:34 job.xml
[2026-04-01 10:06:35] -rw-r--r-- 2 whitlerd whitlerd 257018368 Apr  1 05:34 EVNT.49121342._000001.pool.root.1
[2026-04-01 10:06:35] -rw-r--r-- 2 whitlerd whitlerd    597540 Apr  1 05:34 input.tar.gz
[2026-04-01 10:06:35] -rw-r--r-- 2 whitlerd whitlerd     15845 Apr  1 05:34 start_atlas.sh
[2026-04-01 10:06:35] drwxrwx--x 2 whitlerd whitlerd      4096 Apr  1 05:34 shared
[2026-04-01 10:06:35] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr  1 05:34 boinc_setup_complete
[2026-04-01 10:06:35] -rw-rw-r-- 1 whitlerd whitlerd      9207 Apr  1 05:34 init_data.xml
[2026-04-01 10:06:35] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr  1 05:34 boinc_lockfile
[2026-04-01 10:06:35] -rw-rw-r-- 1 whitlerd whitlerd      2572 Apr  1 05:34 pandaJob.out
[2026-04-01 10:06:35] -rw------- 1 whitlerd whitlerd   1004639 Apr  1 05:34 agis_schedconf.cvmfs.json
[2026-04-01 10:06:35] -rw------- 1 whitlerd whitlerd       437 Apr  1 05:35 workernode_map.json
[2026-04-01 10:06:35] drwx------ 5 whitlerd whitlerd      4096 Apr  1 05:35 pilot3
[2026-04-01 10:06:35] -rw------- 1 whitlerd whitlerd        95 Apr  1 10:05 pilot_heartbeat.json
[2026-04-01 10:06:35] -rw------- 1 whitlerd whitlerd 218698801 Apr  1 10:05 HITS.49267393._000046.pool.root.1
[2026-04-01 10:06:35] -rw-rw-r-- 1 whitlerd whitlerd       530 Apr  1 10:05 boinc_task_state.xml
[2026-04-01 10:06:35] -rw------- 1 whitlerd whitlerd      1041 Apr  1 10:06 memory_monitor_summary.json
[2026-04-01 10:06:35] -rw-rw-r-- 1 whitlerd whitlerd      8192 Apr  1 10:06 boinc_mmap_file
[2026-04-01 10:06:35] -rw-rw-r-- 1 whitlerd whitlerd        28 Apr  1 10:06 wrapper_checkpoint.txt
[2026-04-01 10:06:35] -rw------- 1 whitlerd whitlerd   1511579 Apr  1 10:06 agis_ddmendpoints.agis.ALL.json
[2026-04-01 10:06:35] -rw------- 1 whitlerd whitlerd    449048 Apr  1 10:06 log.49267393._000046.job.log.tgz.1
[2026-04-01 10:06:35] -rw------- 1 whitlerd whitlerd      6340 Apr  1 10:06 heartbeat.json
[2026-04-01 10:06:35] -rw------- 1 whitlerd whitlerd      4564 Apr  1 10:06 pilotlog.txt
[2026-04-01 10:06:35] -rw------- 1 whitlerd whitlerd   2326795 Apr  1 10:06 log.49267393._000046.job.log.1
[2026-04-01 10:06:35] -rw------- 1 whitlerd whitlerd       357 Apr  1 10:06 output.list
[2026-04-01 10:06:35] -rw-rw-r-- 1 whitlerd whitlerd       620 Apr  1 10:06 runtime_log
[2026-04-01 10:06:35] -rw------- 1 whitlerd whitlerd   2795520 Apr  1 10:06 result.tar.gz
[2026-04-01 10:06:35] -rw-rw-r-- 1 whitlerd whitlerd      9036 Apr  1 10:06 runtime_log.err
[2026-04-01 10:06:35] -rw------- 1 whitlerd whitlerd       654 Apr  1 10:06 B6kMDmZfPO9n9Rq4apOajLDm4fhM0noT9bVooX4SDmOP1LDmsS6ibm.diag
[2026-04-01 10:06:35] -rw-rw-r-- 1 whitlerd whitlerd     21095 Apr  1 10:06 stderr.txt
[2026-04-01 10:06:35] HITS file was successfully produced:
[2026-04-01 10:06:35] -rw------- 1 whitlerd whitlerd 218698801 Apr  1 10:05 shared/HITS.pool.root.1
[2026-04-01 10:06:35]  *** Contents of shared directory: ***
[2026-04-01 10:06:35] total 467912
[2026-04-01 10:06:35] -rw-r--r-- 2 whitlerd whitlerd 257018368 Apr  1 05:34 ATLAS.root_0
[2026-04-01 10:06:35] -rw-r--r-- 2 whitlerd whitlerd    597540 Apr  1 05:34 input.tar.gz
[2026-04-01 10:06:35] -rw-r--r-- 2 whitlerd whitlerd     15845 Apr  1 05:34 start_atlas.sh
[2026-04-01 10:06:35] -rw------- 1 whitlerd whitlerd 218698801 Apr  1 10:05 HITS.pool.root.1
[2026-04-01 10:06:35] -rw------- 1 whitlerd whitlerd   2795520 Apr  1 10:06 result.tar.gz
10:06:37 (3383195): run_atlas exited; CPU time 64350.252015
10:06:37 (3383195): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN