Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:27:22 (31687): wrapper (7.7.26015): starting
03:27:22 (31687): wrapper: running run_atlas (--nthreads 8)
[2026-04-01 03:27:22] Arguments: --nthreads 8
[2026-04-01 03:27:22] Threads: 8
[2026-04-01 03:27:22] Checking for CVMFS
[2026-04-01 03:27:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-01 03:27:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-01 03:27:22] Running cvmfs_config stat atlas.cern.ch
[2026-04-01 03:27:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-01 03:27:23] 2.11.2.0 23418 257604 148336 157947 3 1 15938918 18432000 1 130560 0 155881753 99.984 9324408 25777 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-01 03:27:23] CVMFS is ok
[2026-04-01 03:27:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-01 03:27:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-01 03:27:23] Further information can be found at the LHC@home message board.
[2026-04-01 03:27:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 03:27:23] Checking for apptainer binary...
[2026-04-01 03:27:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-01 03:27:23] Running /usr/bin/apptainer --version
[2026-04-01 03:27:23] apptainer version 1.3.2-1.el7
[2026-04-01 03:27:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 03:27:24] c-206-24.aglt2.org
[2026-04-01 03:27:24] apptainer works
[2026-04-01 03:27:24] Set ATHENA_PROC_NUMBER=8
[2026-04-01 03:27:24] Set ATHENA_CORE_NUMBER=8
[2026-04-01 03:27:24] Starting ATLAS job with PandaID=7066428185
[2026-04-01 03:27:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 05:12:01]  *** The last 200 lines of the pilot log: ***
[2026-04-01 05:12:01] 2026-04-01 09:10:57,964 | INFO     | maximum number of monitored processes: 6
[2026-04-01 05:12:01] 2026-04-01 09:10:58,109 | INFO     | job 7066428185 has state=finished
[2026-04-01 05:12:01] 2026-04-01 09:10:58,109 | INFO     | preparing for final server update for job 7066428185 in state='finished'
[2026-04-01 05:12:01] 2026-04-01 09:10:58,110 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7066428185/jobReport.json
[2026-04-01 05:12:01] 2026-04-01 09:10:58,113 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-01 05:12:01] 2026-04-01 09:10:58,113 | INFO     | this job has now completed (state=finished)
[2026-04-01 05:12:01] 2026-04-01 09:10:58,113 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-01 05:12:01] 2026-04-01 09:10:58,113 | INFO     | log transfer has been attempted: DONE
[2026-04-01 05:12:01] 2026-04-01 09:10:58,114 | INFO     | job 7066428185 has finished - writing final server update
[2026-04-01 05:12:01] 2026-04-01 09:10:58,114 | INFO     | total number of processed events: 400 (read)
[2026-04-01 05:12:01] 2026-04-01 09:10:58,117 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7066428185/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 05:12:01] 2026-04-01 09:10:58,117 | INFO     | extracted standard info from prmon json
[2026-04-01 05:12:01] 2026-04-01 09:10:58,117 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 05:12:01] 2026-04-01 09:10:58,118 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-01 05:12:01] 2026-04-01 09:10:58,118 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 05:12:01] 2026-04-01 09:10:58,118 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 05:12:01] 2026-04-01 09:10:58,120 | INFO     | fitting pss+swap vs Time
[2026-04-01 05:12:01] 2026-04-01 09:10:58,120 | INFO     | sum of square deviations: 319447850.0
[2026-04-01 05:12:01] 2026-04-01 09:10:58,121 | INFO     | sum of deviations: -2923695108.0
[2026-04-01 05:12:01] 2026-04-01 09:10:58,121 | INFO     | mean x: 1775031549.0
[2026-04-01 05:12:01] 2026-04-01 09:10:58,121 | INFO     | mean y: 2572966.594059406
[2026-04-01 05:12:01] 2026-04-01 09:10:58,121 | INFO     | intersect: 16248263949.823286
[2026-04-01 05:12:01] 2026-04-01 09:10:58,121 | INFO     | chi2: 1.6584343582909151
[2026-04-01 05:12:01] 2026-04-01 09:10:58,122 | INFO     | sum of square deviations: 274312120.0
[2026-04-01 05:12:01] 2026-04-01 09:10:58,122 | INFO     | sum of deviations: -1926855769.4999988
[2026-04-01 05:12:01] 2026-04-01 09:10:58,122 | INFO     | mean x: 1775031396.5
[2026-04-01 05:12:01] 2026-04-01 09:10:58,122 | INFO     | mean y: 2576337.3854166665
[2026-04-01 05:12:01] 2026-04-01 09:10:58,122 | INFO     | intersect: 12470962668.217846
[2026-04-01 05:12:01] 2026-04-01 09:10:58,123 | INFO     | chi2: 1.6616575703816472
[2026-04-01 05:12:01] 2026-04-01 09:10:58,123 | INFO     | current chi2=1.6616575703816472 (change=-0.19435270830096144 %)
[2026-04-01 05:12:01] 2026-04-01 09:10:58,123 | INFO     | right removable region: 95
[2026-04-01 05:12:01] 2026-04-01 09:10:58,123 | INFO     | sum of square deviations: 274312120.0
[2026-04-01 05:12:01] 2026-04-01 09:10:58,123 | INFO     | sum of deviations: -18766517630.0
[2026-04-01 05:12:01] 2026-04-01 09:10:58,123 | INFO     | mean x: 1775031701.5
[2026-04-01 05:12:01] 2026-04-01 09:10:58,124 | INFO     | mean y: 2625314.7083333335
[2026-04-01 05:12:01] 2026-04-01 09:10:58,124 | INFO     | intersect: 121437885703.52617
[2026-04-01 05:12:01] 2026-04-01 09:10:58,124 | INFO     | chi2: 0.08383719266453561
[2026-04-01 05:12:01] 2026-04-01 09:10:58,124 | INFO     | current chi2=0.08383719266453561 (change=94.94479885529306 %)
[2026-04-01 05:12:01] 2026-04-01 09:10:58,124 | INFO     | sum of square deviations: 233641590.0
[2026-04-01 05:12:01] 2026-04-01 09:10:58,125 | INFO     | sum of deviations: -17036823712.0
[2026-04-01 05:12:01] 2026-04-01 09:10:58,125 | INFO     | mean x: 1775031854.0
[2026-04-01 05:12:01] 2026-04-01 09:10:58,125 | INFO     | mean y: 2618783.5494505493
[2026-04-01 05:12:01] 2026-04-01 09:10:58,125 | INFO     | intersect: 129435502628.34149
[2026-04-01 05:12:01] 2026-04-01 09:10:58,125 | INFO     | chi2: 0.07946480909348684
[2026-04-01 05:12:01] 2026-04-01 09:10:58,125 | INFO     | current chi2=0.07946480909348684 (change=5.215326792422947 %)
[2026-04-01 05:12:01] 2026-04-01 09:10:58,125 | INFO     | left removable region: 20
[2026-04-01 05:12:01] 2026-04-01 09:10:58,126 | INFO     | sum of square deviations: 130793150.0
[2026-04-01 05:12:01] 2026-04-01 09:10:58,126 | INFO     | sum of deviations: -11081104816.0
[2026-04-01 05:12:01] 2026-04-01 09:10:58,126 | INFO     | mean x: 1775031976.0
[2026-04-01 05:12:01] 2026-04-01 09:10:58,126 | INFO     | mean y: 2605399.88
[2026-04-01 05:12:01] 2026-04-01 09:10:58,126 | INFO     | intersect: 150387509944.251
[2026-04-01 05:12:01] 2026-04-01 09:10:58,127 | INFO     | chi2: 0.07083160839192533
[2026-04-01 05:12:01] 2026-04-01 09:10:58,127 | INFO     | current memory leak: -84.72 B/s (using 75 data points, chi2=0.07)
[2026-04-01 05:12:01] 2026-04-01 09:10:58,127 | INFO     | could have reported an average CPU frequency of 1668 MHz (7 samples)
[2026-04-01 05:12:01] 2026-04-01 09:10:58,127 | INFO     | ..............................
[2026-04-01 05:12:01] 2026-04-01 09:10:58,127 | INFO     | . Timing measurements:
[2026-04-01 05:12:01] 2026-04-01 09:10:58,127 | INFO     | . get job = 0 s
[2026-04-01 05:12:01] 2026-04-01 09:10:58,127 | INFO     | . initial setup = 7 s
[2026-04-01 05:12:01] 2026-04-01 09:10:58,128 | INFO     | . payload setup = 14 s
[2026-04-01 05:12:01] 2026-04-01 09:10:58,128 | INFO     | . stage-in = 0 s
[2026-04-01 05:12:01] 2026-04-01 09:10:58,128 | INFO     | . payload execution = 6154 s
[2026-04-01 05:12:01] 2026-04-01 09:10:58,128 | INFO     | . stage-out = 0 s
[2026-04-01 05:12:01] 2026-04-01 09:10:58,128 | INFO     | . log creation = 0 s
[2026-04-01 05:12:01] 2026-04-01 09:10:58,128 | INFO     | ..............................
[2026-04-01 05:12:01] 2026-04-01 09:10:58,328 | INFO     | 
[2026-04-01 05:12:01] 2026-04-01 09:10:58,328 | INFO     | job summary report
[2026-04-01 05:12:01] 2026-04-01 09:10:58,328 | INFO     | --------------------------------------------------
[2026-04-01 05:12:01] 2026-04-01 09:10:58,328 | INFO     | PanDA job id: 7066428185
[2026-04-01 05:12:01] 2026-04-01 09:10:58,329 | INFO     | task id: 49263208
[2026-04-01 05:12:01] 2026-04-01 09:10:58,329 | INFO     | errors: (none)
[2026-04-01 05:12:01] 2026-04-01 09:10:58,329 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 05:12:01] 2026-04-01 09:10:58,329 | INFO     | pilot state: finished 
[2026-04-01 05:12:01] 2026-04-01 09:10:58,329 | INFO     | transexitcode: 0
[2026-04-01 05:12:01] 2026-04-01 09:10:58,329 | INFO     | exeerrorcode: 0
[2026-04-01 05:12:01] 2026-04-01 09:10:58,329 | INFO     | exeerrordiag: 
[2026-04-01 05:12:01] 2026-04-01 09:10:58,330 | INFO     | exitcode: 0
[2026-04-01 05:12:01] 2026-04-01 09:10:58,330 | INFO     | exitmsg: OK
[2026-04-01 05:12:01] 2026-04-01 09:10:58,330 | INFO     | cpuconsumptiontime: 46484 s
[2026-04-01 05:12:01] 2026-04-01 09:10:58,330 | INFO     | nevents: 400
[2026-04-01 05:12:01] 2026-04-01 09:10:58,330 | INFO     | neventsw: 0
[2026-04-01 05:12:01] 2026-04-01 09:10:58,330 | INFO     | pid: 7928
[2026-04-01 05:12:01] 2026-04-01 09:10:58,331 | INFO     | pgrp: 7928
[2026-04-01 05:12:01] 2026-04-01 09:10:58,331 | INFO     | corecount: 8
[2026-04-01 05:12:01] 2026-04-01 09:10:58,331 | INFO     | event service: False
[2026-04-01 05:12:01] 2026-04-01 09:10:58,331 | INFO     | sizes: {0: 2279809, 1: 2280270, 11: 2280270, 6173: 2307310, 6175: 2316308, 6178: 2316364, 6179: 2316714}
[2026-04-01 05:12:01] 2026-04-01 09:10:58,331 | INFO     | --------------------------------------------------
[2026-04-01 05:12:01] 2026-04-01 09:10:58,331 | INFO     | 
[2026-04-01 05:12:01] 2026-04-01 09:10:58,332 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-01 05:12:01] 2026-04-01 09:10:58,354 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,354 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,355 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,355 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,355 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,355 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,355 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,357 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,357 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,357 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 05:12:01] 2026-04-01 09:10:58,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,357 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 05:12:01] 2026-04-01 09:10:58,358 | INFO     | job 7066428185 has completed (purged errors)
[2026-04-01 05:12:01] 2026-04-01 09:10:58,358 | INFO     | overall cleanup function is called
[2026-04-01 05:12:01] 2026-04-01 09:10:59,366 | INFO     | --- collectZombieJob: --- 10, [7928]
[2026-04-01 05:12:01] 2026-04-01 09:10:59,366 | INFO     | zombie collector waiting for pid 7928
[2026-04-01 05:12:01] 2026-04-01 09:10:59,366 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 05:12:01] 2026-04-01 09:10:59,366 | INFO     | collected zombie processes
[2026-04-01 05:12:01] 2026-04-01 09:10:59,366 | INFO     | will attempt to kill all subprocesses of pid=7928
[2026-04-01 05:12:01] 2026-04-01 09:10:59,462 | INFO     | process IDs to be killed: [7928] (in reverse order)
[2026-04-01 05:12:01] 2026-04-01 09:10:59,514 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 05:12:01] 2026-04-01 09:10:59,515 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 05:12:01] 2026-04-01 09:10:59,518 | INFO     | did not find any defunct processes belonging to 7928
[2026-04-01 05:12:01] 2026-04-01 09:10:59,521 | INFO     | did not find any defunct processes belonging to 7928
[2026-04-01 05:12:01] 2026-04-01 09:10:59,521 | INFO     | ready for new job
[2026-04-01 05:12:01] 2026-04-01 09:10:59,522 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-01 05:12:01] 2026-04-01 09:10:59,523 | INFO     | **************************************
[2026-04-01 05:12:01] 2026-04-01 09:10:59,523 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-01 05:12:01] 2026-04-01 09:10:59,523 | INFO     | **************************************
[2026-04-01 05:12:01] 2026-04-01 09:10:59,524 | INFO     | 
[2026-04-01 05:12:01] 2026-04-01 09:10:59,524 | INFO     | architecture information:
[2026-04-01 05:12:01] 2026-04-01 09:10:59,525 | INFO     | executing command: cat /etc/os-release
[2026-04-01 05:12:01] 2026-04-01 09:10:59,539 | INFO     | cat /etc/os-release:
[2026-04-01 05:12:01] NAME="CentOS Linux"
[2026-04-01 05:12:01] VERSION="7 (Core)"
[2026-04-01 05:12:01] ID="centos"
[2026-04-01 05:12:01] ID_LIKE="rhel fedora"
[2026-04-01 05:12:01] VERSION_ID="7"
[2026-04-01 05:12:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 05:12:01] ANSI_COLOR="0;31"
[2026-04-01 05:12:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 05:12:01] HOME_URL="https://www.centos.org/"
[2026-04-01 05:12:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 05:12:01] 
[2026-04-01 05:12:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 05:12:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 05:12:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 05:12:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 05:12:01] 
[2026-04-01 05:12:01] 2026-04-01 09:10:59,540 | INFO     | **************************************
[2026-04-01 05:12:01] 2026-04-01 09:11:00,043 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-01 05:12:01] 2026-04-01 09:11:00,059 | INFO     | sufficient remaining disk space (29150412800 B)
[2026-04-01 05:12:01] 2026-04-01 09:11:00,059 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 05:12:01] 2026-04-01 09:11:00,060 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 05:12:01] 2026-04-01 09:11:00,060 | INFO     | update_server=False
[2026-04-01 05:12:01] 2026-04-01 09:11:00,060 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-01 05:12:01] 2026-04-01 09:11:00,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 05:12:01] 2026-04-01 09:11:00,175 | INFO     | all job control threads have been joined
[2026-04-01 05:12:01] 2026-04-01 09:11:00,467 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-01 05:12:01] 2026-04-01 09:11:00,467 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-01 05:12:01] 2026-04-01 09:11:00,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 05:12:01] 2026-04-01 09:11:00,468 | INFO     | will abort loop
[2026-04-01 05:12:01] 2026-04-01 09:11:00,694 | INFO     | all payload control threads have been joined
[2026-04-01 05:12:01] 2026-04-01 09:11:00,983 | INFO     | all data control threads have been joined
[2026-04-01 05:12:01] 2026-04-01 09:11:01,065 | INFO     | [job] queue monitor thread has finished
[2026-04-01 05:12:01] 2026-04-01 09:11:01,066 | INFO     | [job] retrieve thread has finished
[2026-04-01 05:12:01] 2026-04-01 09:11:01,098 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 05:12:01] 2026-04-01 09:11:01,180 | INFO     | [job] control thread has finished
[2026-04-01 05:12:01] 2026-04-01 09:11:01,297 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 05:12:01] 2026-04-01 09:11:01,350 | INFO     | [payload] validate_post thread has finished
[2026-04-01 05:12:01] 2026-04-01 09:11:01,419 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 05:12:01] 2026-04-01 09:11:01,473 | INFO     | [job] job monitor thread has finished
[2026-04-01 05:12:01] 2026-04-01 09:11:01,475 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 05:12:01] 2026-04-01 09:11:01,696 | INFO     | [payload] control thread has finished
[2026-04-01 05:12:01] 2026-04-01 09:11:01,732 | INFO     | [data] copytool_in thread has finished
[2026-04-01 05:12:01] 2026-04-01 09:11:01,770 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 05:12:01] 2026-04-01 09:11:01,988 | INFO     | [data] control thread has finished
[2026-04-01 05:12:01] 2026-04-01 09:11:02,373 | INFO     | [payload] failed_post thread has finished
[2026-04-01 05:12:01] 2026-04-01 09:11:02,482 | INFO     | [job] validate thread has finished
[2026-04-01 05:12:01] 2026-04-01 09:11:02,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 05:12:01] 2026-04-01 09:11:03,425 | INFO     | [data] copytool_out thread has finished
[2026-04-01 05:12:01] 2026-04-01 09:11:06,896 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 05:12:01] 2026-04-01 09:11:30,804 | INFO     | PID=3424 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-01 05:12:01] 2026-04-01 09:11:30,804 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 05:12:01] 2026-04-01 09:11:30,804 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 05:12:01] 2026-04-01 09:11:30,804 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 05:12:01] 2026-04-01 09:11:55,549 | INFO     | [monitor] cgroup control has ended
[2026-04-01 05:12:01] 2026-04-01 09:11:56,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140564327470912)>', '<ExcThread(monitor, started 140562996913920)>']
[2026-04-01 05:12:01] 2026-04-01 09:11:56,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 05:12:01] 2026-04-01 09:11:56,937 | INFO     | [monitor] control thread has ended
[2026-04-01 05:12:01] 2026-04-01 09:12:01,247 | INFO     | all workflow threads have been joined
[2026-04-01 05:12:01] 2026-04-01 09:12:01,247 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 05:12:01] 2026-04-01 09:12:01,248 | INFO     | traces error code: 0
[2026-04-01 05:12:01] 2026-04-01 09:12:01,249 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 05:12:01] 2026-04-01 09:12:01,371 [wrapper] ==== pilot stdout END ====
[2026-04-01 05:12:01] 2026-04-01 09:12:01,376 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 05:12:01] 2026-04-01 09:12:01,379 [wrapper] pilotpid: 3424
[2026-04-01 05:12:01] 2026-04-01 09:12:01,383 [wrapper] Pilot exit status: 0
[2026-04-01 05:12:01] 2026-04-01 09:12:01,397 [wrapper] pandaids: 7066428185
[2026-04-01 05:12:01] 2026-04-01 09:12:01,445 [wrapper] cleanup supervisor_pilot 30976 3425
[2026-04-01 05:12:01] 2026-04-01 09:12:01,449 [wrapper] Test setup, not cleaning
[2026-04-01 05:12:01] 2026-04-01 09:12:01,453 [wrapper] apfmon messages muted
[2026-04-01 05:12:01] 2026-04-01 09:12:01,457 [wrapper] ==== wrapper stdout END ====
[2026-04-01 05:12:01] 2026-04-01 09:12:01,461 [wrapper] ==== wrapper stderr END ====
[2026-04-01 05:12:01]  *** Error codes and diagnostics ***
[2026-04-01 05:12:01]     "exeErrorCode": 0,
[2026-04-01 05:12:01]     "exeErrorDiag": "",
[2026-04-01 05:12:01]     "pilotErrorCode": 0,
[2026-04-01 05:12:01]     "pilotErrorDiag": "",
[2026-04-01 05:12:01]  *** Listing of results directory ***
[2026-04-01 05:12:01] total 409440
[2026-04-01 05:12:01] -rw-r--r-- 1 boincer umatlas    585013 Mar 29 02:35 pilot3.tar.gz
[2026-04-01 05:12:01] -rwx------ 1 boincer umatlas     36322 Mar 29 02:36 runpilot2-wrapper.sh
[2026-04-01 05:12:01] -rw-r--r-- 1 boincer umatlas      5118 Mar 29 02:36 queuedata.json
[2026-04-01 05:12:01] -rw-r--r-- 1 boincer umatlas       100 Apr  1 03:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 05:12:01] -rwxr-xr-x 1 boincer umatlas      7986 Apr  1 03:27 run_atlas
[2026-04-01 05:12:01] -rw-r--r-- 1 boincer umatlas       105 Apr  1 03:27 job.xml
[2026-04-01 05:12:01] -rw-r--r-- 2 boincer umatlas 222296734 Apr  1 03:27 EVNT.49263206._000102.pool.root.1
[2026-04-01 05:12:01] -rw-r--r-- 2 boincer umatlas     15845 Apr  1 03:27 start_atlas.sh
[2026-04-01 05:12:01] drwxrwx--x 2 boincer umatlas      4096 Apr  1 03:27 shared
[2026-04-01 05:12:01] -rw-r--r-- 2 boincer umatlas    597522 Apr  1 03:27 input.tar.gz
[2026-04-01 05:12:01] -rw-r--r-- 1 boincer umatlas         0 Apr  1 03:27 boinc_lockfile
[2026-04-01 05:12:01] -rw-r--r-- 1 boincer umatlas      2570 Apr  1 03:27 pandaJob.out
[2026-04-01 05:12:01] -rw------- 1 boincer umatlas        57 Apr  1 03:27 setup.sh.local
[2026-04-01 05:12:01] -rw------- 1 boincer umatlas   1004631 Apr  1 03:27 agis_schedconf.cvmfs.json
[2026-04-01 05:12:01] -rw------- 1 boincer umatlas   1511579 Apr  1 03:27 agis_ddmendpoints.agis.ALL.json
[2026-04-01 05:12:01] -rw------- 1 boincer umatlas       445 Apr  1 03:27 workernode_map.json
[2026-04-01 05:12:01] drwx------ 5 boincer umatlas      4096 Apr  1 03:27 pilot3
[2026-04-01 05:12:01] -rw-r--r-- 1 boincer umatlas      5950 Apr  1 05:03 init_data.xml
[2026-04-01 05:12:01] -rw-r--r-- 1 boincer umatlas       529 Apr  1 05:10 boinc_task_state.xml
[2026-04-01 05:12:01] -rw------- 1 boincer umatlas 190564337 Apr  1 05:10 HITS.49263208._000485.pool.root.1
[2026-04-01 05:12:01] -rw------- 1 boincer umatlas      1047 Apr  1 05:10 memory_monitor_summary.json
[2026-04-01 05:12:01] -rw------- 1 boincer umatlas    347906 Apr  1 05:10 log.49263208._000485.job.log.tgz.1
[2026-04-01 05:12:01] -rw------- 1 boincer umatlas      6422 Apr  1 05:10 heartbeat.json
[2026-04-01 05:12:01] -rw-r--r-- 1 boincer umatlas        27 Apr  1 05:11 wrapper_checkpoint.txt
[2026-04-01 05:12:01] -rw-r--r-- 1 boincer umatlas      8192 Apr  1 05:11 boinc_mmap_file
[2026-04-01 05:12:01] -rw------- 1 boincer umatlas        95 Apr  1 05:11 pilot_heartbeat.json
[2026-04-01 05:12:01] -rw------- 1 boincer umatlas      4927 Apr  1 05:12 pilotlog.txt
[2026-04-01 05:12:01] -rw------- 1 boincer umatlas    887373 Apr  1 05:12 log.49263208._000485.job.log.1
[2026-04-01 05:12:01] -rw------- 1 boincer umatlas       357 Apr  1 05:12 output.list
[2026-04-01 05:12:01] -rw-r--r-- 1 boincer umatlas       620 Apr  1 05:12 runtime_log
[2026-04-01 05:12:01] -rw------- 1 boincer umatlas   1249280 Apr  1 05:12 result.tar.gz
[2026-04-01 05:12:01] -rw-r--r-- 1 boincer umatlas      9341 Apr  1 05:12 runtime_log.err
[2026-04-01 05:12:01] -rw------- 1 boincer umatlas       659 Apr  1 05:12 NHSKDmtvyQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmLAMKDm9zY8on.diag
[2026-04-01 05:12:01] -rw-r--r-- 1 boincer umatlas     21197 Apr  1 05:12 stderr.txt
[2026-04-01 05:12:01] HITS file was successfully produced:
[2026-04-01 05:12:01] -rw------- 1 boincer umatlas 190564337 Apr  1 05:10 shared/HITS.pool.root.1
[2026-04-01 05:12:01]  *** Contents of shared directory: ***
[2026-04-01 05:12:01] total 405016
[2026-04-01 05:12:01] -rw-r--r-- 2 boincer umatlas 222296734 Apr  1 03:27 ATLAS.root_0
[2026-04-01 05:12:01] -rw-r--r-- 2 boincer umatlas     15845 Apr  1 03:27 start_atlas.sh
[2026-04-01 05:12:01] -rw-r--r-- 2 boincer umatlas    597522 Apr  1 03:27 input.tar.gz
[2026-04-01 05:12:01] -rw------- 1 boincer umatlas 190564337 Apr  1 05:10 HITS.pool.root.1
[2026-04-01 05:12:01] -rw------- 1 boincer umatlas   1249280 Apr  1 05:12 result.tar.gz
05:12:02 (31687): run_atlas exited; CPU time 46238.896419
05:12:02 (31687): called boinc_finish(0)

</stderr_txt>
]]>

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