Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:16:33 (25774): wrapper (7.7.26015): starting
08:16:33 (25774): wrapper: running run_atlas (--nthreads 8)
[2026-04-01 08:16:33] Arguments: --nthreads 8
[2026-04-01 08:16:33] Threads: 8
[2026-04-01 08:16:33] Checking for CVMFS
[2026-04-01 08:16:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-01 08:16:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-01 08:16:36] Running cvmfs_config stat atlas.cern.ch
[2026-04-01 08:16:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-01 08:16:37] 2.11.2.0 4857 153124 136376 157946 3 11 21078334 25165825 4688 130560 160 46049581 99.836 33661900 1088 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-01 08:16:37] CVMFS is ok
[2026-04-01 08:16:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 08:16:37] Checking for apptainer binary...
[2026-04-01 08:16:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-01 08:16:37] Running /usr/bin/apptainer --version
[2026-04-01 08:16:37] apptainer version 1.3.2-1.el7
[2026-04-01 08:16:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 08:16:44] cg-vwn479.simple-grid.lan
[2026-04-01 08:16:44] apptainer works
[2026-04-01 08:16:44] Set ATHENA_PROC_NUMBER=8
[2026-04-01 08:16:44] Set ATHENA_CORE_NUMBER=8
[2026-04-01 08:16:44] Starting ATLAS job with PandaID=7071838354
[2026-04-01 08:16:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 14:34:37]  *** The last 200 lines of the pilot log: ***
[2026-04-01 14:34:37] 2026-04-01 12:33:50,171 | INFO     | total number of processed events: 400 (read)
[2026-04-01 14:34:37] 2026-04-01 12:33:50,172 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-7071838354/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 14:34:37] 2026-04-01 12:33:50,172 | INFO     | extracted standard info from prmon json
[2026-04-01 14:34:37] 2026-04-01 12:33:50,172 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 14:34:37] 2026-04-01 12:33:50,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-01 14:34:37] 2026-04-01 12:33:50,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 14:34:37] 2026-04-01 12:33:50,172 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 14:34:37] 2026-04-01 12:33:50,176 | INFO     | fitting pss+swap vs Time
[2026-04-01 14:34:37] 2026-04-01 12:33:50,176 | INFO     | sum of square deviations: 14709598590.5
[2026-04-01 14:34:37] 2026-04-01 12:33:50,177 | INFO     | sum of deviations: 146741622508.99997
[2026-04-01 14:34:37] 2026-04-01 12:33:50,177 | INFO     | mean x: 1775035779.5
[2026-04-01 14:34:37] 2026-04-01 12:33:50,178 | INFO     | mean y: 2495473.5801104973
[2026-04-01 14:34:37] 2026-04-01 12:33:50,178 | INFO     | intersect: -17705100603.41819
[2026-04-01 14:34:37] 2026-04-01 12:33:50,178 | INFO     | chi2: 6.6069931498897985
[2026-04-01 14:34:37] 2026-04-01 12:33:50,178 | INFO     | sum of square deviations: 14108461738.0
[2026-04-01 14:34:37] 2026-04-01 12:33:50,180 | INFO     | sum of deviations: 144746362712.00003
[2026-04-01 14:34:37] 2026-04-01 12:33:50,180 | INFO     | mean x: 1775035627.0
[2026-04-01 14:34:37] 2026-04-01 12:33:50,180 | INFO     | mean y: 2494967.37535014
[2026-04-01 14:34:37] 2026-04-01 12:33:50,180 | INFO     | intersect: -18208558474.4357
[2026-04-01 14:34:37] 2026-04-01 12:33:50,180 | INFO     | chi2: 6.612580828682157
[2026-04-01 14:34:37] 2026-04-01 12:33:50,180 | INFO     | current chi2=6.612580828682157 (change=-0.08457218988416466 %)
[2026-04-01 14:34:37] 2026-04-01 12:33:50,180 | INFO     | right removable region: 356
[2026-04-01 14:34:37] 2026-04-01 12:33:50,180 | INFO     | sum of square deviations: 14108461738.0
[2026-04-01 14:34:37] 2026-04-01 12:33:50,182 | INFO     | sum of deviations: 17859477093.00001
[2026-04-01 14:34:37] 2026-04-01 12:33:50,182 | INFO     | mean x: 1775035932.0
[2026-04-01 14:34:37] 2026-04-01 12:33:50,182 | INFO     | mean y: 2528152.630252101
[2026-04-01 14:34:37] 2026-04-01 12:33:50,182 | INFO     | intersect: -2244436410.5879526
[2026-04-01 14:34:37] 2026-04-01 12:33:50,182 | INFO     | chi2: 1.8107087613279131
[2026-04-01 14:34:37] 2026-04-01 12:33:50,182 | INFO     | current chi2=1.8107087613279131 (change=72.59405723225072 %)
[2026-04-01 14:34:37] 2026-04-01 12:33:50,183 | INFO     | sum of square deviations: 13523929848.0
[2026-04-01 14:34:37] 2026-04-01 12:33:50,184 | INFO     | sum of deviations: -49290951546.00001
[2026-04-01 14:34:37] 2026-04-01 12:33:50,184 | INFO     | mean x: 1775036084.5
[2026-04-01 14:34:37] 2026-04-01 12:33:50,184 | INFO     | mean y: 2545601.9943181816
[2026-04-01 14:34:37] 2026-04-01 12:33:50,184 | INFO     | intersect: 6472056950.903754
[2026-04-01 14:34:37] 2026-04-01 12:33:50,185 | INFO     | chi2: 0.2257535020761087
[2026-04-01 14:34:37] 2026-04-01 12:33:50,185 | INFO     | current chi2=0.2257535020761087 (change=87.5323129319511 %)
[2026-04-01 14:34:37] 2026-04-01 12:33:50,185 | INFO     | sum of square deviations: 12955770358.0
[2026-04-01 14:34:37] 2026-04-01 12:33:50,186 | INFO     | sum of deviations: -56257530417.0
[2026-04-01 14:34:37] 2026-04-01 12:33:50,186 | INFO     | mean x: 1775036237.0
[2026-04-01 14:34:37] 2026-04-01 12:33:50,186 | INFO     | mean y: 2547471.876080692
[2026-04-01 14:34:37] 2026-04-01 12:33:50,186 | INFO     | intersect: 7710244685.931989
[2026-04-01 14:34:37] 2026-04-01 12:33:50,187 | INFO     | chi2: 0.20218437961487548
[2026-04-01 14:34:37] 2026-04-01 12:33:50,187 | INFO     | current chi2=0.20218437961487548 (change=10.440202364297017 %)
[2026-04-01 14:34:37] 2026-04-01 12:33:50,187 | INFO     | left removable region: 30
[2026-04-01 14:34:37] 2026-04-01 12:33:50,187 | INFO     | sum of square deviations: 10743038637.5
[2026-04-01 14:34:37] 2026-04-01 12:33:50,188 | INFO     | sum of deviations: -39538834819.99999
[2026-04-01 14:34:37] 2026-04-01 12:33:50,188 | INFO     | mean x: 1775036511.5
[2026-04-01 14:34:37] 2026-04-01 12:33:50,188 | INFO     | mean y: 2542979.680981595
[2026-04-01 14:34:37] 2026-04-01 12:33:50,188 | INFO     | intersect: 6535413035.894397
[2026-04-01 14:34:37] 2026-04-01 12:33:50,189 | INFO     | chi2: 0.14817757195771175
[2026-04-01 14:34:37] 2026-04-01 12:33:50,189 | INFO     | current memory leak: -3.68 B/s (using 326 data points, chi2=0.15)
[2026-04-01 14:34:37] 2026-04-01 12:33:50,189 | INFO     | could have reported an average CPU frequency of 2249 MHz (16 samples)
[2026-04-01 14:34:37] 2026-04-01 12:33:50,189 | INFO     | ..............................
[2026-04-01 14:34:37] 2026-04-01 12:33:50,189 | INFO     | . Timing measurements:
[2026-04-01 14:34:37] 2026-04-01 12:33:50,189 | INFO     | . get job = 0 s
[2026-04-01 14:34:37] 2026-04-01 12:33:50,189 | INFO     | . initial setup = 97 s
[2026-04-01 14:34:37] 2026-04-01 12:33:50,189 | INFO     | . payload setup = 136 s
[2026-04-01 14:34:37] 2026-04-01 12:33:50,189 | INFO     | . stage-in = 0 s
[2026-04-01 14:34:37] 2026-04-01 12:33:50,189 | INFO     | . payload execution = 22171 s
[2026-04-01 14:34:37] 2026-04-01 12:33:50,189 | INFO     | . stage-out = 1 s
[2026-04-01 14:34:37] 2026-04-01 12:33:50,189 | INFO     | . log creation = 0 s
[2026-04-01 14:34:37] 2026-04-01 12:33:50,189 | INFO     | ..............................
[2026-04-01 14:34:37] 2026-04-01 12:33:50,239 | INFO     | 
[2026-04-01 14:34:37] 2026-04-01 12:33:50,239 | INFO     | job summary report
[2026-04-01 14:34:37] 2026-04-01 12:33:50,239 | INFO     | --------------------------------------------------
[2026-04-01 14:34:37] 2026-04-01 12:33:50,239 | INFO     | PanDA job id: 7071838354
[2026-04-01 14:34:37] 2026-04-01 12:33:50,239 | INFO     | task id: 49178447
[2026-04-01 14:34:37] 2026-04-01 12:33:50,239 | INFO     | errors: (none)
[2026-04-01 14:34:37] 2026-04-01 12:33:50,239 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 14:34:37] 2026-04-01 12:33:50,239 | INFO     | pilot state: finished 
[2026-04-01 14:34:37] 2026-04-01 12:33:50,240 | INFO     | transexitcode: 0
[2026-04-01 14:34:37] 2026-04-01 12:33:50,240 | INFO     | exeerrorcode: 0
[2026-04-01 14:34:37] 2026-04-01 12:33:50,240 | INFO     | exeerrordiag: 
[2026-04-01 14:34:37] 2026-04-01 12:33:50,240 | INFO     | exitcode: 0
[2026-04-01 14:34:37] 2026-04-01 12:33:50,240 | INFO     | exitmsg: OK
[2026-04-01 14:34:37] 2026-04-01 12:33:50,240 | INFO     | cpuconsumptiontime: 100652 s
[2026-04-01 14:34:37] 2026-04-01 12:33:50,240 | INFO     | nevents: 400
[2026-04-01 14:34:37] 2026-04-01 12:33:50,240 | INFO     | neventsw: 0
[2026-04-01 14:34:37] 2026-04-01 12:33:50,240 | INFO     | pid: 2017
[2026-04-01 14:34:37] 2026-04-01 12:33:50,240 | INFO     | pgrp: 2017
[2026-04-01 14:34:37] 2026-04-01 12:33:50,240 | INFO     | corecount: 8
[2026-04-01 14:34:37] 2026-04-01 12:33:50,240 | INFO     | event service: False
[2026-04-01 14:34:37] 2026-04-01 12:33:50,240 | INFO     | sizes: {0: 2279194, 1: 2280313, 2: 2280341, 22310: 2314714, 22311: 2323714, 22314: 2323770, 22316: 2324092}
[2026-04-01 14:34:37] 2026-04-01 12:33:50,240 | INFO     | --------------------------------------------------
[2026-04-01 14:34:37] 2026-04-01 12:33:50,240 | INFO     | 
[2026-04-01 14:34:37] 2026-04-01 12:33:50,240 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-04-01 14:34:37] 2026-04-01 12:33:50,251 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,252 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 14:34:37] 2026-04-01 12:33:50,253 | INFO     | job 7071838354 has completed (purged errors)
[2026-04-01 14:34:37] 2026-04-01 12:33:50,253 | INFO     | overall cleanup function is called
[2026-04-01 14:34:37] 2026-04-01 12:33:51,259 | INFO     | --- collectZombieJob: --- 10, [2017]
[2026-04-01 14:34:37] 2026-04-01 12:33:51,259 | INFO     | zombie collector waiting for pid 2017
[2026-04-01 14:34:37] 2026-04-01 12:33:51,259 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 14:34:37] 2026-04-01 12:33:51,259 | INFO     | collected zombie processes
[2026-04-01 14:34:37] 2026-04-01 12:33:51,259 | INFO     | will attempt to kill all subprocesses of pid=2017
[2026-04-01 14:34:37] 2026-04-01 12:33:51,283 | INFO     | process IDs to be killed: [2017] (in reverse order)
[2026-04-01 14:34:37] 2026-04-01 12:33:51,305 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 14:34:37] 2026-04-01 12:33:51,305 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 14:34:37] 2026-04-01 12:33:51,306 | INFO     | did not find any defunct processes belonging to 2017
[2026-04-01 14:34:37] 2026-04-01 12:33:51,307 | INFO     | did not find any defunct processes belonging to 2017
[2026-04-01 14:34:37] 2026-04-01 12:33:51,307 | INFO     | ready for new job
[2026-04-01 14:34:37] 2026-04-01 12:33:51,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-01 14:34:37] 2026-04-01 12:33:51,309 | INFO     | **************************************
[2026-04-01 14:34:37] 2026-04-01 12:33:51,309 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-01 14:34:37] 2026-04-01 12:33:51,309 | INFO     | **************************************
[2026-04-01 14:34:37] 2026-04-01 12:33:51,309 | INFO     | 
[2026-04-01 14:34:37] 2026-04-01 12:33:51,309 | INFO     | pilot is running in a VM
[2026-04-01 14:34:37] 2026-04-01 12:33:51,309 | INFO     | architecture information:
[2026-04-01 14:34:37] 2026-04-01 12:33:51,309 | INFO     | executing command: cat /etc/os-release
[2026-04-01 14:34:37] 2026-04-01 12:33:51,317 | INFO     | cat /etc/os-release:
[2026-04-01 14:34:37] NAME="CentOS Linux"
[2026-04-01 14:34:37] VERSION="7 (Core)"
[2026-04-01 14:34:37] ID="centos"
[2026-04-01 14:34:37] ID_LIKE="rhel fedora"
[2026-04-01 14:34:37] VERSION_ID="7"
[2026-04-01 14:34:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 14:34:37] ANSI_COLOR="0;31"
[2026-04-01 14:34:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 14:34:37] HOME_URL="https://www.centos.org/"
[2026-04-01 14:34:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 14:34:37] 
[2026-04-01 14:34:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 14:34:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 14:34:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 14:34:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 14:34:37] 
[2026-04-01 14:34:37] 2026-04-01 12:33:51,317 | INFO     | **************************************
[2026-04-01 14:34:37] 2026-04-01 12:33:51,820 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-04-01 14:34:37] 2026-04-01 12:33:51,828 | INFO     | sufficient remaining disk space (498129174528 B)
[2026-04-01 14:34:37] 2026-04-01 12:33:51,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 14:34:37] 2026-04-01 12:33:51,828 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 14:34:37] 2026-04-01 12:33:51,828 | INFO     | update_server=False
[2026-04-01 14:34:37] 2026-04-01 12:33:51,829 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-01 14:34:37] 2026-04-01 12:33:51,829 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 14:34:37] 2026-04-01 12:33:51,829 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 14:34:37] 2026-04-01 12:33:52,092 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-01 14:34:37] 2026-04-01 12:33:52,092 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-01 14:34:37] 2026-04-01 12:33:52,092 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 14:34:37] 2026-04-01 12:33:52,092 | INFO     | will abort loop
[2026-04-01 14:34:37] 2026-04-01 12:33:52,829 | INFO     | [job] retrieve thread has finished
[2026-04-01 14:34:37] 2026-04-01 12:33:52,829 | INFO     | all payload control threads have been joined
[2026-04-01 14:34:37] 2026-04-01 12:33:52,834 | INFO     | [job] queue monitor thread has finished
[2026-04-01 14:34:37] 2026-04-01 12:33:52,918 | INFO     | all data control threads have been joined
[2026-04-01 14:34:37] 2026-04-01 12:33:52,988 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 14:34:37] 2026-04-01 12:33:53,027 | INFO     | all job control threads have been joined
[2026-04-01 14:34:37] 2026-04-01 12:33:53,097 | INFO     | [job] job monitor thread has finished
[2026-04-01 14:34:37] 2026-04-01 12:33:53,137 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 14:34:37] 2026-04-01 12:33:53,222 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 14:34:37] 2026-04-01 12:33:53,472 | INFO     | [data] copytool_in thread has finished
[2026-04-01 14:34:37] 2026-04-01 12:33:53,835 | INFO     | [payload] control thread has finished
[2026-04-01 14:34:37] 2026-04-01 12:33:53,835 | INFO     | [data] copytool_out thread has finished
[2026-04-01 14:34:37] 2026-04-01 12:33:53,849 | INFO     | [payload] validate_post thread has finished
[2026-04-01 14:34:37] 2026-04-01 12:33:53,923 | INFO     | [data] control thread has finished
[2026-04-01 14:34:37] 2026-04-01 12:33:54,033 | INFO     | [job] control thread has finished
[2026-04-01 14:34:37] 2026-04-01 12:33:54,102 | INFO     | [payload] failed_post thread has finished
[2026-04-01 14:34:37] 2026-04-01 12:33:54,335 | INFO     | [job] validate thread has finished
[2026-04-01 14:34:37] 2026-04-01 12:33:54,381 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 14:34:37] 2026-04-01 12:33:58,387 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 14:34:37] 2026-04-01 12:34:02,199 | INFO     | job.realtimelogging is not enabled
[2026-04-01 14:34:37] 2026-04-01 12:34:03,204 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 14:34:37] 2026-04-01 12:34:22,631 | INFO     | PID=29924 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-01 14:34:37] 2026-04-01 12:34:22,631 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 14:34:37] 2026-04-01 12:34:22,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 14:34:37] 2026-04-01 12:34:22,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 14:34:37] 2026-04-01 12:34:30,407 | INFO     | [monitor] cgroup control has ended
[2026-04-01 14:34:37] 2026-04-01 12:34:32,321 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140292437047104)>', '<ExcThread(monitor, started 140292011321088)>']
[2026-04-01 14:34:37] 2026-04-01 12:34:32,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 14:34:37] 2026-04-01 12:34:32,682 | INFO     | [monitor] control thread has ended
[2026-04-01 14:34:37] 2026-04-01 12:34:37,346 | INFO     | all workflow threads have been joined
[2026-04-01 14:34:37] 2026-04-01 12:34:37,346 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 14:34:37] 2026-04-01 12:34:37,346 | INFO     | traces error code: 0
[2026-04-01 14:34:37] 2026-04-01 12:34:37,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 14:34:37] 2026-04-01 12:34:37,408 [wrapper] ==== pilot stdout END ====
[2026-04-01 14:34:37] 2026-04-01 12:34:37,410 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 14:34:37] 2026-04-01 12:34:37,411 [wrapper] pilotpid: 29924
[2026-04-01 14:34:37] 2026-04-01 12:34:37,413 [wrapper] Pilot exit status: 0
[2026-04-01 14:34:37] 2026-04-01 12:34:37,421 [wrapper] pandaids: 7071838354
[2026-04-01 14:34:37] 2026-04-01 12:34:37,434 [wrapper] cleanup supervisor_pilot 26960 29925
[2026-04-01 14:34:37] 2026-04-01 12:34:37,440 [wrapper] Test setup, not cleaning
[2026-04-01 14:34:37] 2026-04-01 12:34:37,442 [wrapper] apfmon messages muted
[2026-04-01 14:34:37] 2026-04-01 12:34:37,443 [wrapper] ==== wrapper stdout END ====
[2026-04-01 14:34:37] 2026-04-01 12:34:37,445 [wrapper] ==== wrapper stderr END ====
[2026-04-01 14:34:37]  *** Error codes and diagnostics ***
[2026-04-01 14:34:37]     "exeErrorCode": 0,
[2026-04-01 14:34:37]     "exeErrorDiag": "",
[2026-04-01 14:34:37]     "pilotErrorCode": 0,
[2026-04-01 14:34:37]     "pilotErrorDiag": "",
[2026-04-01 14:34:37]  *** Listing of results directory ***
[2026-04-01 14:34:37] total 492744
[2026-04-01 14:34:37] -rw-r--r--. 1 boinc boinc    585013 Mar 28 03:21 pilot3.tar.gz
[2026-04-01 14:34:37] -rwx------. 1 boinc boinc     36322 Mar 28 03:24 runpilot2-wrapper.sh
[2026-04-01 14:34:37] -rw-r--r--. 1 boinc boinc      5118 Mar 28 03:26 queuedata.json
[2026-04-01 14:34:37] -rw-r--r--. 1 boinc boinc       100 Apr  1 08:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 14:34:37] -rwxr-xr-x. 1 boinc boinc      7986 Apr  1 08:16 run_atlas
[2026-04-01 14:34:37] -rw-r--r--. 1 boinc boinc       105 Apr  1 08:16 job.xml
[2026-04-01 14:34:37] -rw-r--r--. 1 boinc boinc      6391 Apr  1 08:16 init_data.xml
[2026-04-01 14:34:37] -rw-r--r--. 2 boinc boinc 244033664 Apr  1 08:16 EVNT.49128800._000023.pool.root.1
[2026-04-01 14:34:37] -rw-r--r--. 2 boinc boinc     15845 Apr  1 08:16 start_atlas.sh
[2026-04-01 14:34:37] drwxrwx--x. 2 boinc boinc        68 Apr  1 08:16 shared
[2026-04-01 14:34:37] -rw-r--r--. 2 boinc boinc    597558 Apr  1 08:16 input.tar.gz
[2026-04-01 14:34:37] -rw-r--r--. 1 boinc boinc         0 Apr  1 08:16 boinc_lockfile
[2026-04-01 14:34:37] -rw-r--r--. 1 boinc boinc      2600 Apr  1 08:16 pandaJob.out
[2026-04-01 14:34:37] -rw-------. 1 boinc boinc       415 Apr  1 08:21 workernode_map.json
[2026-04-01 14:34:37] -rw-------. 1 boinc boinc   1004639 Apr  1 08:21 agis_schedconf.cvmfs.json
[2026-04-01 14:34:37] drwx------. 5 boinc boinc      4096 Apr  1 08:21 pilot3
[2026-04-01 14:34:37] -rw-------. 1 boinc boinc 249234237 Apr  1 14:33 HITS.49178447._001622.pool.root.1
[2026-04-01 14:34:37] -rw-------. 1 boinc boinc      1030 Apr  1 14:33 memory_monitor_summary.json
[2026-04-01 14:34:37] -rw-------. 1 boinc boinc   1511579 Apr  1 14:33 agis_ddmendpoints.agis.ALL.json
[2026-04-01 14:34:37] -rw-r--r--. 1 boinc boinc       531 Apr  1 14:33 boinc_task_state.xml
[2026-04-01 14:34:37] -rw-------. 1 boinc boinc    584880 Apr  1 14:33 log.49178447._001622.job.log.tgz.1
[2026-04-01 14:34:37] -rw-------. 1 boinc boinc      6316 Apr  1 14:33 heartbeat.json
[2026-04-01 14:34:37] -rw-r--r--. 1 boinc boinc      8192 Apr  1 14:34 boinc_mmap_file
[2026-04-01 14:34:37] -rw-r--r--. 1 boinc boinc        29 Apr  1 14:34 wrapper_checkpoint.txt
[2026-04-01 14:34:37] -rw-------. 1 boinc boinc        95 Apr  1 14:34 pilot_heartbeat.json
[2026-04-01 14:34:37] -rw-------. 1 boinc boinc      5064 Apr  1 14:34 pilotlog.txt
[2026-04-01 14:34:37] -rw-------. 1 boinc boinc   3107883 Apr  1 14:34 log.49178447._001622.job.log.1
[2026-04-01 14:34:37] -rw-------. 1 boinc boinc       357 Apr  1 14:34 output.list
[2026-04-01 14:34:37] -rw-r--r--. 1 boinc boinc       620 Apr  1 14:34 runtime_log
[2026-04-01 14:34:37] -rw-------. 1 boinc boinc   3706880 Apr  1 14:34 result.tar.gz
[2026-04-01 14:34:37] -rw-r--r--. 1 boinc boinc      8832 Apr  1 14:34 runtime_log.err
[2026-04-01 14:34:37] -rw-------. 1 boinc boinc       657 Apr  1 14:34 QANLDm0WYQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmelIKDmvTBVQm.diag
[2026-04-01 14:34:37] -rw-r--r--. 1 boinc boinc     20717 Apr  1 14:34 stderr.txt
[2026-04-01 14:34:37] HITS file was successfully produced:
[2026-04-01 14:34:37] -rw-------. 1 boinc boinc 249234237 Apr  1 14:33 shared/HITS.pool.root.1
[2026-04-01 14:34:37]  *** Contents of shared directory: ***
[2026-04-01 14:34:37] total 485932
[2026-04-01 14:34:37] -rw-r--r--. 2 boinc boinc 244033664 Apr  1 08:16 ATLAS.root_0
[2026-04-01 14:34:37] -rw-r--r--. 2 boinc boinc     15845 Apr  1 08:16 start_atlas.sh
[2026-04-01 14:34:37] -rw-r--r--. 2 boinc boinc    597558 Apr  1 08:16 input.tar.gz
[2026-04-01 14:34:37] -rw-------. 1 boinc boinc 249234237 Apr  1 14:33 HITS.pool.root.1
[2026-04-01 14:34:37] -rw-------. 1 boinc boinc   3706880 Apr  1 14:34 result.tar.gz
14:34:38 (25774): run_atlas exited; CPU time 100896.758060
14:34:38 (25774): called boinc_finish(0)

</stderr_txt>
]]>

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