Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:57:36 (1718180): wrapper (7.7.26015): starting
06:57:36 (1718180): wrapper: running run_atlas (--nthreads 3)
[2026-04-02 06:57:36] Arguments: --nthreads 3
[2026-04-02 06:57:36] Threads: 3
[2026-04-02 06:57:36] Checking for CVMFS
[2026-04-02 06:57:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-02 06:57:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-02 06:57:37] Running cvmfs_config stat atlas.cern.ch
[2026-04-02 06:57:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-02 06:57:37] 2.9.2.0 871207 7530 86944 157983 1 50 28346052 36864001 0 130560 0 3085263 99.985 273465 6183 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-02 06:57:37] CVMFS is ok
[2026-04-02 06:57:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-02 06:57:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-02 06:57:37] Further information can be found at the LHC@home message board.
[2026-04-02 06:57:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-02 06:57:37] Checking for apptainer binary...
[2026-04-02 06:57:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-02 06:57:37] Running /usr/bin/apptainer --version
[2026-04-02 06:57:37] apptainer version 1.4.1-1.1
[2026-04-02 06:57:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-02 06:57:37] thA325a
[2026-04-02 06:57:37] apptainer works
[2026-04-02 06:57:37] Set ATHENA_PROC_NUMBER=3
[2026-04-02 06:57:37] Set ATHENA_CORE_NUMBER=3
[2026-04-02 06:57:37] Starting ATLAS job with PandaID=7063598582
[2026-04-02 06:57:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-02 10:05:09]  *** The last 200 lines of the pilot log: ***
[2026-04-02 10:05:09] 2026-04-02 08:04:43,717 | WARNING  | found no corresponding commands to process id(s)
[2026-04-02 10:05:09] 2026-04-02 08:04:43,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-02 10:05:09] 2026-04-02 08:04:43,718 | INFO     | did not find any defunct processes belonging to 1726653
[2026-04-02 10:05:09] 2026-04-02 08:04:43,719 | INFO     | did not find any defunct processes belonging to 1726653
[2026-04-02 10:05:09] 2026-04-02 08:04:43,719 | INFO     | ready for new job
[2026-04-02 10:05:09] 2026-04-02 08:04:43,719 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-02 10:05:09] 2026-04-02 08:04:43,720 | INFO     | **************************************
[2026-04-02 10:05:09] 2026-04-02 08:04:43,720 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-02 10:05:09] 2026-04-02 08:04:43,720 | INFO     | **************************************
[2026-04-02 10:05:09] 2026-04-02 08:04:43,720 | INFO     | 
[2026-04-02 10:05:09] 2026-04-02 08:04:43,720 | INFO     | architecture information:
[2026-04-02 10:05:09] 2026-04-02 08:04:43,721 | INFO     | executing command: cat /etc/os-release
[2026-04-02 10:05:09] 2026-04-02 08:04:43,729 | INFO     | cat /etc/os-release:
[2026-04-02 10:05:09] NAME="CentOS Linux"
[2026-04-02 10:05:09] VERSION="7 (Core)"
[2026-04-02 10:05:09] ID="centos"
[2026-04-02 10:05:09] ID_LIKE="rhel fedora"
[2026-04-02 10:05:09] VERSION_ID="7"
[2026-04-02 10:05:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-02 10:05:09] ANSI_COLOR="0;31"
[2026-04-02 10:05:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-02 10:05:09] HOME_URL="https://www.centos.org/"
[2026-04-02 10:05:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-02 10:05:09] 
[2026-04-02 10:05:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-02 10:05:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-02 10:05:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-02 10:05:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-02 10:05:09] 
[2026-04-02 10:05:09] 2026-04-02 08:04:43,730 | INFO     | **************************************
[2026-04-02 10:05:09] 2026-04-02 08:04:44,233 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-02 10:05:09] 2026-04-02 08:04:44,246 | INFO     | sufficient remaining disk space (232855175168 B)
[2026-04-02 10:05:09] 2026-04-02 08:04:44,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-02 10:05:09] 2026-04-02 08:04:44,246 | INFO     | current server update state: UPDATING_FINAL
[2026-04-02 10:05:09] 2026-04-02 08:04:44,246 | INFO     | update_server=False
[2026-04-02 10:05:09] 2026-04-02 08:04:44,246 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-02 10:05:09] 2026-04-02 08:04:44,246 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-02 10:05:09] 2026-04-02 08:04:44,246 | INFO     | found 0 job(s) in 20 queues
[2026-04-02 10:05:09] 2026-04-02 08:04:44,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-02 10:05:09] 2026-04-02 08:04:44,246 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-02 10:05:09] 2026-04-02 08:04:44,246 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-02 10:05:09] 2026-04-02 08:04:44,296 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-02 10:05:09] 2026-04-02 08:04:44,297 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-02 10:05:09] 2026-04-02 08:04:44,297 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-02 10:05:09] 2026-04-02 08:04:44,297 | INFO     | will abort loop
[2026-04-02 10:05:09] 2026-04-02 08:04:44,831 | INFO     | all payload control threads have been joined
[2026-04-02 10:05:09] 2026-04-02 08:04:44,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-02 10:05:09] 2026-04-02 08:04:45,004 | INFO     | all data control threads have been joined
[2026-04-02 10:05:09] 2026-04-02 08:04:45,252 | INFO     | [job] retrieve thread has finished
[2026-04-02 10:05:09] 2026-04-02 08:04:45,252 | INFO     | [job] queue monitor thread has finished
[2026-04-02 10:05:09] 2026-04-02 08:04:45,302 | INFO     | [job] job monitor thread has finished
[2026-04-02 10:05:09] 2026-04-02 08:04:45,470 | INFO     | [payload] execute_payloads thread has finished
[2026-04-02 10:05:09] 2026-04-02 08:04:45,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-02 10:05:09] 2026-04-02 08:04:45,647 | INFO     | [payload] failed_post thread has finished
[2026-04-02 10:05:09] 2026-04-02 08:04:45,836 | INFO     | [payload] control thread has finished
[2026-04-02 10:05:09] 2026-04-02 08:04:45,931 | INFO     | all job control threads have been joined
[2026-04-02 10:05:09] 2026-04-02 08:04:46,006 | INFO     | [data] control thread has finished
[2026-04-02 10:05:09] 2026-04-02 08:04:46,157 | INFO     | [payload] validate_post thread has finished
[2026-04-02 10:05:09] 2026-04-02 08:04:46,204 | INFO     | [job] validate thread has finished
[2026-04-02 10:05:09] 2026-04-02 08:04:46,205 | INFO     | [job] create_data_payload thread has finished
[2026-04-02 10:05:09] 2026-04-02 08:04:46,300 | INFO     | [payload] validate_pre thread has finished
[2026-04-02 10:05:09] 2026-04-02 08:04:46,495 | INFO     | [data] copytool_in thread has finished
[2026-04-02 10:05:09] 2026-04-02 08:04:46,891 | INFO     | [data] copytool_out thread has finished
[2026-04-02 10:05:09] 2026-04-02 08:04:46,937 | INFO     | [job] control thread has finished
[2026-04-02 10:05:09] 2026-04-02 08:04:49,601 | INFO     | [data] queue_monitor thread has finished
[2026-04-02 10:05:09] 2026-04-02 08:04:55,253 | INFO     | job.realtimelogging is not enabled
[2026-04-02 10:05:09] 2026-04-02 08:04:56,255 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-02 10:05:09] 2026-04-02 08:05:02,470 | INFO     | [monitor] cgroup control has ended
[2026-04-02 10:05:09] 2026-04-02 08:05:04,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140341575251776)>', '<ExcThread(monitor, started 140340942075648)>']
[2026-04-02 10:05:09] 2026-04-02 08:05:04,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-02 10:05:09] 2026-04-02 08:05:04,351 | INFO     | [monitor] control thread has ended
[2026-04-02 10:05:09] 2026-04-02 08:05:09,184 | INFO     | all workflow threads have been joined
[2026-04-02 10:05:09] 2026-04-02 08:05:09,184 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-02 10:05:09] 2026-04-02 08:05:09,184 | INFO     | traces error code: 0
[2026-04-02 10:05:09] 2026-04-02 08:05:09,184 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-02 10:05:09] 2026-04-02 08:05:09,235 [wrapper] ==== pilot stdout END ====
[2026-04-02 10:05:09] 2026-04-02 08:05:09,237 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-02 10:05:09] 2026-04-02 08:05:09,240 [wrapper] pilotpid: 1722227
[2026-04-02 10:05:09] 2026-04-02 08:05:09,242 [wrapper] Pilot exit status: 0
[2026-04-02 10:05:09] 2026-04-02 08:05:09,249 [wrapper] pandaids: 7063598582
[2026-04-02 10:05:09] 2026-04-02 08:05:09,265 [wrapper] cleanup supervisor_pilot 1733447 1722228
[2026-04-02 10:05:09] 2026-04-02 08:05:09,267 [wrapper] Test setup, not cleaning
[2026-04-02 10:05:09] 2026-04-02 08:05:09,270 [wrapper] apfmon messages muted
[2026-04-02 10:05:09] 2026-04-02 08:05:09,272 [wrapper] ==== wrapper stdout END ====
[2026-04-02 10:05:09] 2026-04-02 08:05:09,274 [wrapper] ==== wrapper stderr END ====
[2026-04-02 10:05:09]  *** Error codes and diagnostics ***
[2026-04-02 10:05:09]     "exeErrorCode": 0,
[2026-04-02 10:05:09]     "exeErrorDiag": "",
[2026-04-02 10:05:09]     "pilotErrorCode": 0,
[2026-04-02 10:05:09]     "pilotErrorDiag": "",
[2026-04-02 10:05:09]  *** Listing of results directory ***
[2026-04-02 10:05:09] total 464328
[2026-04-02 10:05:09] -rw-r--r-- 1 boinc boinc    585013 Mar 24 01:11 pilot3.tar.gz
[2026-04-02 10:05:09] -rwx------ 1 boinc boinc     36322 Mar 24 01:12 runpilot2-wrapper.sh
[2026-04-02 10:05:09] -rw-r--r-- 1 boinc boinc      5111 Mar 24 01:13 queuedata.json
[2026-04-02 10:05:09] -rw-r--r-- 1 boinc boinc       100 Apr  2 06:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-02 10:05:09] -rwxr-xr-x 1 boinc boinc      7986 Apr  2 06:57 run_atlas
[2026-04-02 10:05:09] -rw-r--r-- 1 boinc boinc       105 Apr  2 06:57 job.xml
[2026-04-02 10:05:09] -rw-r--r-- 2 boinc boinc 240019121 Apr  2 06:57 EVNT.49135257._000005.pool.root.1
[2026-04-02 10:05:09] drwxrwx--x 2 boinc boinc      4096 Apr  2 06:57 shared
[2026-04-02 10:05:09] -rw-r--r-- 2 boinc boinc    597544 Apr  2 06:57 input.tar.gz
[2026-04-02 10:05:09] -rw-r--r-- 2 boinc boinc     15845 Apr  2 06:57 start_atlas.sh
[2026-04-02 10:05:09] -rw-r--r-- 1 boinc boinc         0 Apr  2 06:57 boinc_setup_complete
[2026-04-02 10:05:09] -rw-r--r-- 1 boinc boinc      6439 Apr  2 06:57 init_data.xml
[2026-04-02 10:05:09] -rw-r--r-- 1 boinc boinc         0 Apr  2 06:57 boinc_lockfile
[2026-04-02 10:05:09] -rw-r--r-- 1 boinc boinc      2610 Apr  2 06:57 pandaJob.out
[2026-04-02 10:05:09] -rw------- 1 boinc boinc   1005493 Apr  2 06:57 agis_schedconf.cvmfs.json
[2026-04-02 10:05:09] -rw------- 1 boinc boinc       428 Apr  2 06:57 workernode_map.json
[2026-04-02 10:05:09] drwx------ 5 boinc boinc      4096 Apr  2 06:57 pilot3
[2026-04-02 10:05:09] -rw------- 1 boinc boinc 227642548 Apr  2 10:04 HITS.49176793._000281.pool.root.1
[2026-04-02 10:05:09] -rw-r--r-- 1 boinc boinc       530 Apr  2 10:04 boinc_task_state.xml
[2026-04-02 10:05:09] -rw------- 1 boinc boinc      1020 Apr  2 10:04 memory_monitor_summary.json
[2026-04-02 10:05:09] -rw------- 1 boinc boinc   1511579 Apr  2 10:04 agis_ddmendpoints.agis.ALL.json
[2026-04-02 10:05:09] -rw------- 1 boinc boinc    353542 Apr  2 10:04 log.49176793._000281.job.log.tgz.1
[2026-04-02 10:05:09] -rw------- 1 boinc boinc      6313 Apr  2 10:04 heartbeat.json
[2026-04-02 10:05:09] -rw------- 1 boinc boinc        95 Apr  2 10:04 pilot_heartbeat.json
[2026-04-02 10:05:09] -rw-r--r-- 1 boinc boinc      8192 Apr  2 10:05 boinc_mmap_file
[2026-04-02 10:05:09] -rw-r--r-- 1 boinc boinc        28 Apr  2 10:05 wrapper_checkpoint.txt
[2026-04-02 10:05:09] -rw------- 1 boinc boinc      4810 Apr  2 10:05 pilotlog.txt
[2026-04-02 10:05:09] -rw------- 1 boinc boinc   1589284 Apr  2 10:05 log.49176793._000281.job.log.1
[2026-04-02 10:05:09] -rw------- 1 boinc boinc       357 Apr  2 10:05 output.list
[2026-04-02 10:05:09] -rw-r--r-- 1 boinc boinc       620 Apr  2 10:05 runtime_log
[2026-04-02 10:05:09] -rw------- 1 boinc boinc   1955840 Apr  2 10:05 result.tar.gz
[2026-04-02 10:05:09] -rw-r--r-- 1 boinc boinc      8902 Apr  2 10:05 runtime_log.err
[2026-04-02 10:05:09] -rw------- 1 boinc boinc       661 Apr  2 10:05 KUdMDm9Y4O9n9Rq4apOajLDm4fhM0noT9bVoINGKDm4EFKDmFE4tCo.diag
[2026-04-02 10:05:09] -rw-r--r-- 1 boinc boinc     10212 Apr  2 10:05 stderr.txt
[2026-04-02 10:05:09] HITS file was successfully produced:
[2026-04-02 10:05:09] -rw------- 1 boinc boinc 227642548 Apr  2 10:04 shared/HITS.pool.root.1
[2026-04-02 10:05:09]  *** Contents of shared directory: ***
[2026-04-02 10:05:09] total 459224
[2026-04-02 10:05:09] -rw-r--r-- 2 boinc boinc 240019121 Apr  2 06:57 ATLAS.root_0
[2026-04-02 10:05:09] -rw-r--r-- 2 boinc boinc    597544 Apr  2 06:57 input.tar.gz
[2026-04-02 10:05:09] -rw-r--r-- 2 boinc boinc     15845 Apr  2 06:57 start_atlas.sh
[2026-04-02 10:05:09] -rw------- 1 boinc boinc 227642548 Apr  2 10:04 HITS.pool.root.1
[2026-04-02 10:05:09] -rw------- 1 boinc boinc   1955840 Apr  2 10:05 result.tar.gz
10:05:11 (1718180): run_atlas exited; CPU time 32435.030382
10:05:11 (1718180): called boinc_finish(0)

</stderr_txt>
]]>

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