Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:30:32 (112615): wrapper (7.7.26015): starting
17:30:32 (112615): wrapper: running run_atlas (--nthreads 10)
[2026-03-31 17:30:32] Arguments: --nthreads 10
[2026-03-31 17:30:32] Threads: 10
[2026-03-31 17:30:32] Checking for CVMFS
[2026-03-31 17:30:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 17:30:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 17:30:32] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 17:30:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 17:30:33] 2.13.3.0 5451 138257 216080 157932 3 435 30265679 40960000 7506 16776704 0 152039852 99.657 139842595 30472 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-31 17:30:33] CVMFS is ok
[2026-03-31 17:30:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 17:30:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 17:30:33] Further information can be found at the LHC@home message board.
[2026-03-31 17:30:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 17:30:33] Checking for apptainer binary...
[2026-03-31 17:30:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 17:30:33] Running /usr/bin/apptainer --version
[2026-03-31 17:30:33] apptainer version 1.4.5-2.el9
[2026-03-31 17:30:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 17:30:33] c-211-7.aglt2.org
[2026-03-31 17:30:33] apptainer works
[2026-03-31 17:30:33] Set ATHENA_PROC_NUMBER=10
[2026-03-31 17:30:33] Set ATHENA_CORE_NUMBER=10
[2026-03-31 17:30:33] Starting ATLAS job with PandaID=7073144648
[2026-03-31 17:30:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 20:17:12]  *** The last 200 lines of the pilot log: ***
[2026-03-31 20:17:12] 2026-04-01 00:16:33,689 | INFO     | fitting pss+swap vs Time
[2026-03-31 20:17:12] 2026-04-01 00:16:33,689 | INFO     | sum of square deviations: 1342669314.4908028
[2026-03-31 20:17:12] 2026-04-01 00:16:33,691 | INFO     | sum of deviations: 7055078658.57667
[2026-03-31 20:17:12] 2026-04-01 00:16:33,691 | INFO     | mean x (centered): 0.0
[2026-03-31 20:17:12] 2026-04-01 00:16:33,691 | INFO     | mean y: 2588753.1656441716
[2026-03-31 20:17:12] 2026-04-01 00:16:33,691 | INFO     | intersect: 2588753.1656441716
[2026-03-31 20:17:12] 2026-04-01 00:16:33,691 | INFO     | chi2: 2.27805300640004
[2026-03-31 20:17:12] 2026-04-01 00:16:33,692 | INFO     | sum of square deviations: 1222866685.898728
[2026-03-31 20:17:12] 2026-04-01 00:16:33,693 | INFO     | sum of deviations: 17609318456.151882
[2026-03-31 20:17:12] 2026-04-01 00:16:33,693 | INFO     | mean x (centered): 0.0
[2026-03-31 20:17:12] 2026-04-01 00:16:33,693 | INFO     | mean y: 2601844.5379746836
[2026-03-31 20:17:12] 2026-04-01 00:16:33,693 | INFO     | intersect: 2601844.5379746836
[2026-03-31 20:17:12] 2026-04-01 00:16:33,694 | INFO     | chi2: 1.574354768786991
[2026-03-31 20:17:12] 2026-04-01 00:16:33,694 | INFO     | current chi2=1.574354768786991 (change=30.89033642483538 %)
[2026-03-31 20:17:12] 2026-04-01 00:16:33,694 | INFO     | sum of square deviations: 1110413032.2352912
[2026-03-31 20:17:12] 2026-04-01 00:16:33,695 | INFO     | sum of deviations: 17072958086.941172
[2026-03-31 20:17:12] 2026-04-01 00:16:33,696 | INFO     | mean x (centered): 0.0
[2026-03-31 20:17:12] 2026-04-01 00:16:33,696 | INFO     | mean y: 2601116.9607843137
[2026-03-31 20:17:12] 2026-04-01 00:16:33,696 | INFO     | intersect: 2601116.9607843137
[2026-03-31 20:17:12] 2026-04-01 00:16:33,696 | INFO     | chi2: 1.5760612045989344
[2026-03-31 20:17:12] 2026-04-01 00:16:33,696 | INFO     | current chi2=1.5760612045989344 (change=-0.10838953492408718 %)
[2026-03-31 20:17:12] 2026-04-01 00:16:33,697 | INFO     | right removable region: 152
[2026-03-31 20:17:12] 2026-04-01 00:16:33,697 | INFO     | sum of square deviations: 1222820935.898728
[2026-03-31 20:17:12] 2026-04-01 00:16:33,698 | INFO     | sum of deviations: -20832837797.25316
[2026-03-31 20:17:12] 2026-04-01 00:16:33,698 | INFO     | mean x (centered): 0.0
[2026-03-31 20:17:12] 2026-04-01 00:16:33,698 | INFO     | mean y: 2623830.4367088606
[2026-03-31 20:17:12] 2026-04-01 00:16:33,699 | INFO     | intersect: 2623830.4367088606
[2026-03-31 20:17:12] 2026-04-01 00:16:33,699 | INFO     | chi2: 0.7828868049937031
[2026-03-31 20:17:12] 2026-04-01 00:16:33,699 | INFO     | current chi2=0.7828868049937031 (change=65.63351235488226 %)
[2026-03-31 20:17:12] 2026-04-01 00:16:33,700 | INFO     | sum of square deviations: 1110321532.2352912
[2026-03-31 20:17:12] 2026-04-01 00:16:33,701 | INFO     | sum of deviations: -21701090241.15686
[2026-03-31 20:17:12] 2026-04-01 00:16:33,701 | INFO     | mean x (centered): 0.0
[2026-03-31 20:17:12] 2026-04-01 00:16:33,701 | INFO     | mean y: 2624934.22875817
[2026-03-31 20:17:12] 2026-04-01 00:16:33,701 | INFO     | intersect: 2624934.22875817
[2026-03-31 20:17:12] 2026-04-01 00:16:33,702 | INFO     | chi2: 0.7602430328908738
[2026-03-31 20:17:12] 2026-04-01 00:16:33,702 | INFO     | current chi2=0.7602430328908738 (change=2.892343051178572 %)
[2026-03-31 20:17:12] 2026-04-01 00:16:33,702 | INFO     | left removable region: 10
[2026-03-31 20:17:12] 2026-04-01 00:16:33,702 | INFO     | sum of square deviations: 887645817.8873258
[2026-03-31 20:17:12] 2026-04-01 00:16:33,703 | INFO     | sum of deviations: -10500526759.957739
[2026-03-31 20:17:12] 2026-04-01 00:16:33,703 | INFO     | mean x (centered): 0.0
[2026-03-31 20:17:12] 2026-04-01 00:16:33,704 | INFO     | mean y: 2640808.23943662
[2026-03-31 20:17:12] 2026-04-01 00:16:33,704 | INFO     | intersect: 2640808.23943662
[2026-03-31 20:17:12] 2026-04-01 00:16:33,704 | INFO     | chi2: 0.03050792134360698
[2026-03-31 20:17:12] 2026-04-01 00:16:33,704 | INFO     | current memory leak: -11.83 B/s (using 142 data points, chi2=0.03)
[2026-03-31 20:17:12] 2026-04-01 00:16:33,705 | INFO     | could have reported an average CPU frequency of 2643 MHz (9 samples)
[2026-03-31 20:17:12] 2026-04-01 00:16:33,708 | INFO     | ..............................
[2026-03-31 20:17:12] 2026-04-01 00:16:33,708 | INFO     | . Timing measurements:
[2026-03-31 20:17:12] 2026-04-01 00:16:33,708 | INFO     | . get job = 0 s
[2026-03-31 20:17:12] 2026-04-01 00:16:33,708 | INFO     | . initial setup = 6 s
[2026-03-31 20:17:12] 2026-04-01 00:16:33,708 | INFO     | . payload setup = 8 s
[2026-03-31 20:17:12] 2026-04-01 00:16:33,708 | INFO     | . stage-in = 0 s
[2026-03-31 20:17:12] 2026-04-01 00:16:33,708 | INFO     | . payload execution = 9915 s
[2026-03-31 20:17:12] 2026-04-01 00:16:33,708 | INFO     | . stage-out = 1 s
[2026-03-31 20:17:12] 2026-04-01 00:16:33,709 | INFO     | . log creation = 0 s
[2026-03-31 20:17:12] 2026-04-01 00:16:33,709 | INFO     | ..............................
[2026-03-31 20:17:12] 2026-04-01 00:16:33,858 | INFO     | 
[2026-03-31 20:17:12] 2026-04-01 00:16:33,859 | INFO     | job summary report
[2026-03-31 20:17:12] 2026-04-01 00:16:33,859 | INFO     | --------------------------------------------------
[2026-03-31 20:17:12] 2026-04-01 00:16:33,859 | INFO     | PanDA job id: 7073144648
[2026-03-31 20:17:12] 2026-04-01 00:16:33,859 | INFO     | task id: 49263191
[2026-03-31 20:17:12] 2026-04-01 00:16:33,860 | INFO     | errors: (none)
[2026-03-31 20:17:12] 2026-04-01 00:16:33,860 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 20:17:12] 2026-04-01 00:16:33,860 | INFO     | pilot state: finished 
[2026-03-31 20:17:12] 2026-04-01 00:16:33,860 | INFO     | transexitcode: 0
[2026-03-31 20:17:12] 2026-04-01 00:16:33,860 | INFO     | exeerrorcode: 0
[2026-03-31 20:17:12] 2026-04-01 00:16:33,860 | INFO     | exeerrordiag: 
[2026-03-31 20:17:12] 2026-04-01 00:16:33,860 | INFO     | exitcode: 0
[2026-03-31 20:17:12] 2026-04-01 00:16:33,860 | INFO     | exitmsg: OK
[2026-03-31 20:17:12] 2026-04-01 00:16:33,861 | INFO     | cpuconsumptiontime: 54357 s
[2026-03-31 20:17:12] 2026-04-01 00:16:33,861 | INFO     | nevents: 400
[2026-03-31 20:17:12] 2026-04-01 00:16:33,861 | INFO     | neventsw: 0
[2026-03-31 20:17:12] 2026-04-01 00:16:33,861 | INFO     | pid: 130124
[2026-03-31 20:17:12] 2026-04-01 00:16:33,861 | INFO     | pgrp: 130124
[2026-03-31 20:17:12] 2026-04-01 00:16:33,861 | INFO     | corecount: 10
[2026-03-31 20:17:12] 2026-04-01 00:16:33,861 | INFO     | event service: False
[2026-03-31 20:17:12] 2026-04-01 00:16:33,861 | INFO     | sizes: {0: 2279963, 1: 2281593, 11: 2281621, 9928: 2310190, 9929: 2310189, 9931: 2319243, 9933: 2319685}
[2026-03-31 20:17:12] 2026-04-01 00:16:33,862 | INFO     | --------------------------------------------------
[2026-03-31 20:17:12] 2026-04-01 00:16:33,862 | INFO     | 
[2026-03-31 20:17:12] 2026-04-01 00:16:33,862 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-31 20:17:12] 2026-04-01 00:16:33,934 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,935 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,935 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,935 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,935 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,935 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,935 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,936 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,936 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,941 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,941 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,941 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,941 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,941 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,942 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,942 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 20:17:12] 2026-04-01 00:16:33,942 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,942 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 20:17:12] 2026-04-01 00:16:33,942 | INFO     | job 7073144648 has completed (purged errors)
[2026-03-31 20:17:12] 2026-04-01 00:16:33,943 | INFO     | overall cleanup function is called
[2026-03-31 20:17:12] 2026-04-01 00:16:34,151 | WARNING  | process 130124 can no longer be monitored (due to stat problems) - aborting
[2026-03-31 20:17:12] 2026-04-01 00:16:34,426 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 20:17:12] 2026-04-01 00:16:34,427 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/2/PanDA_Pilot-7073144648/payload.stdout) since it has not been created yet
[2026-03-31 20:17:12] 2026-04-01 00:16:34,428 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-31 20:17:12] 2026-04-01 00:16:34,445 | INFO     | sufficient remaining disk space (63144198144 B)
[2026-03-31 20:17:12] 2026-04-01 00:16:34,445 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-31 20:17:12] 2026-04-01 00:16:34,446 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-7073144648/HITS.49263191._013515.pool.root.1 since it does not exist
[2026-03-31 20:17:12] 2026-04-01 00:16:34,829 | INFO     | number of running child processes to parent process 130124: 1
[2026-03-31 20:17:12] 2026-04-01 00:16:34,829 | INFO     | maximum number of monitored processes: 6
[2026-03-31 20:17:12] 2026-04-01 00:16:34,829 | INFO     | aborting job monitoring since job object (job id=7073144648) has expired
[2026-03-31 20:17:12] 2026-04-01 00:16:34,960 | INFO     | --- collectZombieJob: --- 10, [130124]
[2026-03-31 20:17:12] 2026-04-01 00:16:34,960 | INFO     | zombie collector waiting for pid 130124
[2026-03-31 20:17:12] 2026-04-01 00:16:34,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 20:17:12] 2026-04-01 00:16:34,960 | INFO     | collected zombie processes
[2026-03-31 20:17:12] 2026-04-01 00:16:34,960 | INFO     | will attempt to kill all subprocesses of pid=130124
[2026-03-31 20:17:12] 2026-04-01 00:16:35,331 | INFO     | process IDs to be killed: [130124] (in reverse order)
[2026-03-31 20:17:12] 2026-04-01 00:16:35,437 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 20:17:12] 2026-04-01 00:16:35,437 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 20:17:12] 2026-04-01 00:16:35,446 | INFO     | did not find any defunct processes belonging to 130124
[2026-03-31 20:17:12] 2026-04-01 00:16:35,454 | INFO     | did not find any defunct processes belonging to 130124
[2026-03-31 20:17:12] 2026-04-01 00:16:35,455 | INFO     | Ready for new job
[2026-03-31 20:17:12] 2026-04-01 00:16:35,457 | INFO     | **************************************
[2026-03-31 20:17:12] 2026-04-01 00:16:35,457 | INFO     | ***  PanDA Pilot version 3.12.3.1  ***
[2026-03-31 20:17:12] 2026-04-01 00:16:35,458 | INFO     | **************************************
[2026-03-31 20:17:12] 2026-04-01 00:16:35,458 | INFO     | 
[2026-03-31 20:17:12] 2026-04-01 00:16:35,465 | INFO     | architecture information:
[2026-03-31 20:17:12] 2026-04-01 00:16:35,469 | INFO     | executing command: cat /etc/os-release
[2026-03-31 20:17:12] 2026-04-01 00:16:35,500 | INFO     | cat /etc/os-release:
[2026-03-31 20:17:12] NAME="CentOS Linux"
[2026-03-31 20:17:12] VERSION="7 (Core)"
[2026-03-31 20:17:12] ID="centos"
[2026-03-31 20:17:12] ID_LIKE="rhel fedora"
[2026-03-31 20:17:12] VERSION_ID="7"
[2026-03-31 20:17:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 20:17:12] ANSI_COLOR="0;31"
[2026-03-31 20:17:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 20:17:12] HOME_URL="https://www.centos.org/"
[2026-03-31 20:17:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 20:17:12] 
[2026-03-31 20:17:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 20:17:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 20:17:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 20:17:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 20:17:12] 
[2026-03-31 20:17:12] 2026-04-01 00:16:35,501 | INFO     | **************************************
[2026-03-31 20:17:12] 2026-04-01 00:16:36,007 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-31 20:17:12] 2026-04-01 00:16:36,049 | INFO     | sufficient remaining disk space (63145246720 B)
[2026-03-31 20:17:12] 2026-04-01 00:16:36,050 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 20:17:12] 2026-04-01 00:16:36,050 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 20:17:12] 2026-04-01 00:16:36,050 | INFO     | update_server=False
[2026-03-31 20:17:12] 2026-04-01 00:16:36,050 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 20:17:12] 2026-04-01 00:16:36,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 20:17:12] 2026-04-01 00:16:36,052 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 20:17:12] 2026-04-01 00:16:36,052 | INFO     | aborting loop
[2026-03-31 20:17:12] 2026-04-01 00:16:36,255 | INFO     | all payload control threads have been joined
[2026-03-31 20:17:12] 2026-04-01 00:16:36,533 | INFO     | all job control threads have been joined
[2026-03-31 20:17:12] 2026-04-01 00:16:36,640 | INFO     | all data control threads have been joined
[2026-03-31 20:17:12] 2026-04-01 00:16:37,055 | INFO     | [job] retrieve thread has finished
[2026-03-31 20:17:12] 2026-04-01 00:16:37,058 | INFO     | [job] job monitor thread has finished
[2026-03-31 20:17:12] 2026-04-01 00:16:37,161 | INFO     | [payload] validate_post thread has finished
[2026-03-31 20:17:12] 2026-04-01 00:16:37,261 | INFO     | [payload] control thread has finished
[2026-03-31 20:17:12] 2026-04-01 00:16:37,297 | INFO     | [data] copytool_in thread has finished
[2026-03-31 20:17:12] 2026-04-01 00:16:37,329 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 20:17:12] 2026-04-01 00:16:37,408 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 20:17:12] 2026-04-01 00:16:37,539 | INFO     | [job] control thread has finished
[2026-03-31 20:17:12] 2026-04-01 00:16:37,575 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 20:17:12] 2026-04-01 00:16:37,646 | INFO     | [data] control thread has finished
[2026-03-31 20:17:12] 2026-04-01 00:16:37,659 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 20:17:12] 2026-04-01 00:16:38,236 | INFO     | [payload] failed_post thread has finished
[2026-03-31 20:17:12] 2026-04-01 00:16:38,414 | INFO     | [job] validate thread has finished
[2026-03-31 20:17:12] 2026-04-01 00:16:38,868 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 20:17:12] 2026-04-01 00:16:39,414 | INFO     | [data] copytool_out thread has finished
[2026-03-31 20:17:12] 2026-04-01 00:16:39,896 | INFO     | [job] queue monitor thread has finished
[2026-03-31 20:17:12] 2026-04-01 00:16:40,059 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 20:17:12] 2026-04-01 00:16:46,200 | INFO     | job.realtimelogging is not enabled
[2026-03-31 20:17:12] 2026-04-01 00:16:47,206 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 20:17:12] 2026-04-01 00:17:05,655 | INFO     | PID=119102 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-31 20:17:12] 2026-04-01 00:17:05,655 | INFO     | .. there are 9 such processes running
[2026-03-31 20:17:12] 2026-04-01 00:17:05,657 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 20:17:12] 2026-04-01 00:17:05,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 20:17:12] 2026-04-01 00:17:05,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 20:17:12] 2026-04-01 00:17:06,201 | INFO     | [monitor] cgroup control has ended
[2026-03-31 20:17:12] 2026-04-01 00:17:07,282 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140016192685888)>', '<ExcThread(monitor, started 140015665411840)>']
[2026-03-31 20:17:12] 2026-04-01 00:17:07,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 20:17:12] 2026-04-01 00:17:07,679 | INFO     | [monitor] control thread has ended
[2026-03-31 20:17:12] 2026-04-01 00:17:12,323 | INFO     | all workflow threads have been joined
[2026-03-31 20:17:12] 2026-04-01 00:17:12,335 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 20:17:12] 2026-04-01 00:17:12,335 | INFO     | traces error code: 0
[2026-03-31 20:17:12] 2026-04-01 00:17:12,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 20:17:12] 2026-04-01 00:17:12,474 [wrapper] ==== pilot stdout END ====
[2026-03-31 20:17:12] 2026-04-01 00:17:12,477 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 20:17:12] 2026-04-01 00:17:12,479 [wrapper] pilotpid: 119102
[2026-03-31 20:17:12] 2026-04-01 00:17:12,483 [wrapper] Pilot exit status: 0
[2026-03-31 20:17:12] 2026-04-01 00:17:12,497 [wrapper] pandaids: 7073144648
[2026-03-31 20:17:12] 2026-04-01 00:17:12,553 [wrapper] cleanup supervisor_pilot  423027 119103
[2026-03-31 20:17:12] 2026-04-01 00:17:12,557 [wrapper] Test setup, not cleaning
[2026-03-31 20:17:12] 2026-04-01 00:17:12,560 [wrapper] apfmon messages muted
[2026-03-31 20:17:12] 2026-04-01 00:17:12,562 [wrapper] ==== wrapper stdout END ====
[2026-03-31 20:17:12] 2026-04-01 00:17:12,569 [wrapper] ==== wrapper stderr END ====
[2026-03-31 20:17:12]  *** Error codes and diagnostics ***
[2026-03-31 20:17:12]     "exeErrorCode": 0,
[2026-03-31 20:17:12]     "pilotErrorCode": 0,
[2026-03-31 20:17:12]  *** Listing of results directory ***
[2026-03-31 20:17:12] total 420612
[2026-03-31 20:17:12] -rwx------. 1 boincer umatlas     36322 Mar 31 17:16 runpilot2-wrapper.sh
[2026-03-31 20:17:12] -rw-r--r--. 1 boincer umatlas    644188 Mar 31 17:17 pilot3.tar.gz
[2026-03-31 20:17:12] -rw-r--r--. 1 boincer umatlas      5118 Mar 31 17:20 queuedata.json
[2026-03-31 20:17:12] -rw-r--r--. 1 boincer umatlas       100 Mar 31 17:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 20:17:12] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 31 17:30 run_atlas
[2026-03-31 20:17:12] -rw-r--r--. 1 boincer umatlas       105 Mar 31 17:30 job.xml
[2026-03-31 20:17:12] -rw-r--r--. 2 boincer umatlas 226510216 Mar 31 17:30 EVNT.49263189._000541.pool.root.1
[2026-03-31 20:17:12] -rw-r--r--. 2 boincer umatlas     15665 Mar 31 17:30 start_atlas.sh
[2026-03-31 20:17:12] drwxrwx--x. 2 boincer umatlas      4096 Mar 31 17:30 shared
[2026-03-31 20:17:12] -rw-r--r--. 2 boincer umatlas    656921 Mar 31 17:30 input.tar.gz
[2026-03-31 20:17:12] -rw-r--r--. 1 boincer umatlas         0 Mar 31 17:30 boinc_lockfile
[2026-03-31 20:17:12] -rw-r--r--. 1 boincer umatlas      2577 Mar 31 17:30 pandaJob.out
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas        57 Mar 31 17:30 setup.sh.local
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas   1005014 Mar 31 17:30 agis_schedconf.cvmfs.json
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas   1511579 Mar 31 17:30 agis_ddmendpoints.agis.ALL.json
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas       441 Mar 31 17:30 workernode_map.json
[2026-03-31 20:17:12] drwx------. 5 boincer umatlas      4096 Mar 31 17:30 pilot3
[2026-03-31 20:17:12] -rw-r--r--. 1 boincer umatlas      6529 Mar 31 20:12 init_data.xml
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas 197598989 Mar 31 20:15 HITS.49263191._013515.pool.root.1
[2026-03-31 20:17:12] -rw-r--r--. 1 boincer umatlas       487 Mar 31 20:15 boinc_task_state.xml
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas      1037 Mar 31 20:16 memory_monitor_summary.json
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas    384191 Mar 31 20:16 log.49263191._013515.job.log.tgz.1
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas      6403 Mar 31 20:16 heartbeat_new.json
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas      6294 Mar 31 20:16 heartbeat.json
[2026-03-31 20:17:12] -rw-r--r--. 1 boincer umatlas      8192 Mar 31 20:16 boinc_mmap_file
[2026-03-31 20:17:12] -rw-r--r--. 1 boincer umatlas        27 Mar 31 20:16 wrapper_checkpoint.txt
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas        95 Mar 31 20:17 pilot_heartbeat.json
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas      4889 Mar 31 20:17 pilotlog.txt
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas    879700 Mar 31 20:17 log.49263191._013515.job.log.1
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas       357 Mar 31 20:17 output.list
[2026-03-31 20:17:12] -rw-r--r--. 1 boincer umatlas       410 Mar 31 20:17 runtime_log
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas   1280000 Mar 31 20:17 result.tar.gz
[2026-03-31 20:17:12] -rw-r--r--. 1 boincer umatlas      8960 Mar 31 20:17 runtime_log.err
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas       653 Mar 31 20:17 39b44a8e1dcf.diag
[2026-03-31 20:17:12] -rw-r--r--. 1 boincer umatlas     21239 Mar 31 20:17 stderr.txt
[2026-03-31 20:17:12] HITS file was successfully produced:
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas 197598989 Mar 31 20:15 shared/HITS.pool.root.1
[2026-03-31 20:17:12]  *** Contents of shared directory: ***
[2026-03-31 20:17:12] total 416092
[2026-03-31 20:17:12] -rw-r--r--. 2 boincer umatlas 226510216 Mar 31 17:30 ATLAS.root_0
[2026-03-31 20:17:12] -rw-r--r--. 2 boincer umatlas     15665 Mar 31 17:30 start_atlas.sh
[2026-03-31 20:17:12] -rw-r--r--. 2 boincer umatlas    656921 Mar 31 17:30 input.tar.gz
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas 197598989 Mar 31 20:15 HITS.pool.root.1
[2026-03-31 20:17:12] -rw-------. 1 boincer umatlas   1280000 Mar 31 20:17 result.tar.gz
20:17:14 (112615): run_atlas exited; CPU time 54593.959941
20:17:14 (112615): called boinc_finish(0)

</stderr_txt>
]]>

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