Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:03:35 (1147247): wrapper (7.7.26015): starting
16:03:35 (1147247): wrapper: running run_atlas (--nthreads 12)
[2026-04-01 16:03:35] Arguments: --nthreads 12
[2026-04-01 16:03:35] Threads: 12
[2026-04-01 16:03:35] Checking for CVMFS
[2026-04-01 16:03:35] No cvmfs_config command found, will try listing directly
[2026-04-01 16:03:35] CVMFS is ok
[2026-04-01 16:03:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-01 16:03:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-01 16:03:35] Further information can be found at the LHC@home message board.
[2026-04-01 16:03:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 16:03:35] Checking for apptainer binary...
[2026-04-01 16:03:35] which: no apptainer in ((null))
[2026-04-01 16:03:35] apptainer is not installed, using version from CVMFS
[2026-04-01 16:03:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 16:03:35] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot204/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-04-01 16:03:35] apptainer works
[2026-04-01 16:03:35] Set ATHENA_PROC_NUMBER=12
[2026-04-01 16:03:35] Set ATHENA_CORE_NUMBER=12
[2026-04-01 16:03:35] Starting ATLAS job with PandaID=7063224486
[2026-04-01 16:03:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot204/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 16:37:52]  *** The last 200 lines of the pilot log: ***
[2026-04-01 16:37:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-01 16:37:52]  is_altstaged=None
[2026-04-01 16:37:52]  is_tar=False
[2026-04-01 16:37:52]  lfn=log.49191779._000032.job.log.tgz.1
[2026-04-01 16:37:52]  mtime=0
[2026-04-01 16:37:52]  protocol_id=None
[2026-04-01 16:37:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-01 16:37:52]  replicas=None
[2026-04-01 16:37:52]  scope=mc23_13p6TeV
[2026-04-01 16:37:52]  status=None
[2026-04-01 16:37:52]  status_code=0
[2026-04-01 16:37:52]  storage_token=
[2026-04-01 16:37:52]  surl=/var/lib/boinc/var/slot204/slots/2/PanDA_Pilot-7063224486/log.49191779._000032.job.log.tgz.1
[2026-04-01 16:37:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/45/log.49191779._000032.job.log.tgz.1
[2026-04-01 16:37:52]  workdir=None
[2026-04-01 16:37:52] ]
[2026-04-01 16:37:52] 2026-04-01 14:36:42,026 | INFO     | transferring file log.49191779._000032.job.log.tgz.1 from /var/lib/boinc/var/slot204/slots/2/PanDA_Pilot-7063224486/log.49191779._000032.job.log.tgz.1 to /var/lib/
[2026-04-01 16:37:52] 2026-04-01 14:36:42,027 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot204/slots/2/PanDA_Pilot-7063224486/log.49191779._000032.job.log.tgz.1 /var/lib/boinc/var/slot204/slots/2/
[2026-04-01 16:37:52] 2026-04-01 14:36:42,039 | INFO     | adding to output.list: log.49191779._000032.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/45/log.49191779._000032.job.log.tg
[2026-04-01 16:37:52] 2026-04-01 14:36:42,039 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-01 16:37:52] 2026-04-01 14:36:42,039 | INFO     | summary of transferred files:
[2026-04-01 16:37:52] 2026-04-01 14:36:42,039 | INFO     |  -- lfn=log.49191779._000032.job.log.tgz.1, status_code=0, status=transferred
[2026-04-01 16:37:52] 2026-04-01 14:36:42,039 | INFO     | stage-out finished correctly
[2026-04-01 16:37:52] 2026-04-01 14:36:42,344 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-01 16:37:52] 2026-04-01 14:36:42,551 | INFO     | time since job start (1979s) is within the limit (345600.0s)
[2026-04-01 16:37:52] 2026-04-01 14:36:44,381 | INFO     | job 7063224486 has state=finished
[2026-04-01 16:37:52] 2026-04-01 14:36:44,382 | INFO     | preparing for final server update for job 7063224486 in state='finished'
[2026-04-01 16:37:52] 2026-04-01 14:36:44,382 | INFO     | reading metadata from: /var/lib/boinc/var/slot204/slots/2/PanDA_Pilot-7063224486/jobReport.json
[2026-04-01 16:37:52] 2026-04-01 14:36:44,383 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot204/slots/2/workernode_map.json
[2026-04-01 16:37:52] 2026-04-01 14:36:44,384 | INFO     | this job has now completed (state=finished)
[2026-04-01 16:37:52] 2026-04-01 14:36:44,384 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-01 16:37:52] 2026-04-01 14:36:44,384 | INFO     | log transfer has been attempted: DONE
[2026-04-01 16:37:52] 2026-04-01 14:36:44,384 | INFO     | job 7063224486 has finished - writing final server update
[2026-04-01 16:37:52] 2026-04-01 14:36:44,384 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_13256/.job.ad'
[2026-04-01 16:37:52] 2026-04-01 14:36:44,384 | INFO     | total number of processed events: 400 (read)
[2026-04-01 16:37:52] 2026-04-01 14:36:44,399 | INFO     | using path: /var/lib/boinc/var/slot204/slots/2/PanDA_Pilot-7063224486/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 16:37:52] 2026-04-01 14:36:44,399 | INFO     | extracted standard info from prmon json
[2026-04-01 16:37:52] 2026-04-01 14:36:44,400 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 16:37:52] 2026-04-01 14:36:44,400 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-01 16:37:52] 2026-04-01 14:36:44,400 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 16:37:52] 2026-04-01 14:36:44,400 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 16:37:52] 2026-04-01 14:36:44,400 | INFO     | fitting pss+swap vs Time
[2026-04-01 16:37:52] 2026-04-01 14:36:44,400 | INFO     | sum of square deviations: 5441962.5
[2026-04-01 16:37:52] 2026-04-01 14:36:44,400 | INFO     | sum of deviations: 147923109.0
[2026-04-01 16:37:52] 2026-04-01 14:36:44,401 | INFO     | mean x: 1775053309.5
[2026-04-01 16:37:52] 2026-04-01 14:36:44,401 | INFO     | mean y: 2737217.153846154
[2026-04-01 16:37:52] 2026-04-01 14:36:44,401 | INFO     | intersect: -48246658875.15279
[2026-04-01 16:37:52] 2026-04-01 14:36:44,401 | INFO     | chi2: 0.00012844873587412024
[2026-04-01 16:37:52] 2026-04-01 14:36:44,401 | INFO     | current memory leak: 27.18 B/s (using 26 data points, chi2=0.00)
[2026-04-01 16:37:52] 2026-04-01 14:36:44,401 | INFO     | could have reported an average CPU frequency of 3657 MHz (5 samples)
[2026-04-01 16:37:52] 2026-04-01 14:36:44,401 | INFO     | ..............................
[2026-04-01 16:37:52] 2026-04-01 14:36:44,401 | INFO     | . Timing measurements:
[2026-04-01 16:37:52] 2026-04-01 14:36:44,401 | INFO     | . get job = 0 s
[2026-04-01 16:37:52] 2026-04-01 14:36:44,401 | INFO     | . initial setup = 3 s
[2026-04-01 16:37:52] 2026-04-01 14:36:44,401 | INFO     | . payload setup = 4 s
[2026-04-01 16:37:52] 2026-04-01 14:36:44,401 | INFO     | . stage-in = 0 s
[2026-04-01 16:37:52] 2026-04-01 14:36:44,401 | INFO     | . payload execution = 1957 s
[2026-04-01 16:37:52] 2026-04-01 14:36:44,401 | INFO     | . stage-out = 0 s
[2026-04-01 16:37:52] 2026-04-01 14:36:44,401 | INFO     | . log creation = 0 s
[2026-04-01 16:37:52] 2026-04-01 14:36:44,401 | INFO     | ..............................
[2026-04-01 16:37:52] 2026-04-01 14:36:44,440 | INFO     | 
[2026-04-01 16:37:52] 2026-04-01 14:36:44,441 | INFO     | job summary report
[2026-04-01 16:37:52] 2026-04-01 14:36:44,441 | INFO     | --------------------------------------------------
[2026-04-01 16:37:52] 2026-04-01 14:36:44,441 | INFO     | PanDA job id: 7063224486
[2026-04-01 16:37:52] 2026-04-01 14:36:44,441 | INFO     | task id: 49191779
[2026-04-01 16:37:52] 2026-04-01 14:36:44,441 | INFO     | errors: (none)
[2026-04-01 16:37:52] 2026-04-01 14:36:44,441 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 16:37:52] 2026-04-01 14:36:44,441 | INFO     | pilot state: finished 
[2026-04-01 16:37:52] 2026-04-01 14:36:44,441 | INFO     | transexitcode: 0
[2026-04-01 16:37:52] 2026-04-01 14:36:44,441 | INFO     | exeerrorcode: 0
[2026-04-01 16:37:52] 2026-04-01 14:36:44,441 | INFO     | exeerrordiag: 
[2026-04-01 16:37:52] 2026-04-01 14:36:44,441 | INFO     | exitcode: 0
[2026-04-01 16:37:52] 2026-04-01 14:36:44,441 | INFO     | exitmsg: OK
[2026-04-01 16:37:52] 2026-04-01 14:36:44,441 | INFO     | cpuconsumptiontime: 21305 s
[2026-04-01 16:37:52] 2026-04-01 14:36:44,441 | INFO     | nevents: 400
[2026-04-01 16:37:52] 2026-04-01 14:36:44,441 | INFO     | neventsw: 0
[2026-04-01 16:37:52] 2026-04-01 14:36:44,441 | INFO     | pid: 1157506
[2026-04-01 16:37:52] 2026-04-01 14:36:44,441 | INFO     | pgrp: 1157506
[2026-04-01 16:37:52] 2026-04-01 14:36:44,442 | INFO     | corecount: 12
[2026-04-01 16:37:52] 2026-04-01 14:36:44,442 | INFO     | event service: False
[2026-04-01 16:37:52] 2026-04-01 14:36:44,442 | INFO     | sizes: {0: 2280247, 11: 2280247, 1966: 2305221, 1968: 2314299, 1970: 2314469}
[2026-04-01 16:37:52] 2026-04-01 14:36:44,442 | INFO     | --------------------------------------------------
[2026-04-01 16:37:52] 2026-04-01 14:36:44,442 | INFO     | 
[2026-04-01 16:37:52] 2026-04-01 14:36:44,442 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot204/slots/2
[2026-04-01 16:37:52] 2026-04-01 14:36:44,461 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,461 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,461 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,461 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,461 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,462 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,462 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,462 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 16:37:52] 2026-04-01 14:36:44,462 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,462 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 16:37:52] 2026-04-01 14:36:44,462 | INFO     | job 7063224486 has completed (purged errors)
[2026-04-01 16:37:52] 2026-04-01 14:36:44,462 | INFO     | overall cleanup function is called
[2026-04-01 16:37:52] 2026-04-01 14:36:45,469 | INFO     | --- collectZombieJob: --- 10, [1157506]
[2026-04-01 16:37:52] 2026-04-01 14:36:45,469 | INFO     | zombie collector waiting for pid 1157506
[2026-04-01 16:37:52] 2026-04-01 14:36:45,469 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 16:37:52] 2026-04-01 14:36:45,469 | INFO     | collected zombie processes
[2026-04-01 16:37:52] 2026-04-01 14:36:45,469 | INFO     | will attempt to kill all subprocesses of pid=1157506
[2026-04-01 16:37:52] 2026-04-01 14:36:45,649 | INFO     | process IDs to be killed: [1157506] (in reverse order)
[2026-04-01 16:37:52] 2026-04-01 14:36:45,745 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 16:37:52] 2026-04-01 14:36:45,746 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 16:37:52] 2026-04-01 14:36:45,763 | INFO     | did not find any defunct processes belonging to 1157506
[2026-04-01 16:37:52] 2026-04-01 14:36:45,775 | INFO     | did not find any defunct processes belonging to 1157506
[2026-04-01 16:37:52] 2026-04-01 14:36:45,775 | INFO     | ready for new job
[2026-04-01 16:37:52] 2026-04-01 14:36:45,775 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-01 16:37:52] 2026-04-01 14:36:45,776 | INFO     | **************************************
[2026-04-01 16:37:52] 2026-04-01 14:36:45,776 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-01 16:37:52] 2026-04-01 14:36:45,776 | INFO     | **************************************
[2026-04-01 16:37:52] 2026-04-01 14:36:45,776 | INFO     | 
[2026-04-01 16:37:52] 2026-04-01 14:36:45,779 | INFO     | architecture information:
[2026-04-01 16:37:52] 2026-04-01 14:36:45,779 | INFO     | executing command: cat /etc/os-release
[2026-04-01 16:37:52] 2026-04-01 14:36:45,791 | INFO     | cat /etc/os-release:
[2026-04-01 16:37:52] NAME="CentOS Linux"
[2026-04-01 16:37:52] VERSION="7 (Core)"
[2026-04-01 16:37:52] ID="centos"
[2026-04-01 16:37:52] ID_LIKE="rhel fedora"
[2026-04-01 16:37:52] VERSION_ID="7"
[2026-04-01 16:37:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 16:37:52] ANSI_COLOR="0;31"
[2026-04-01 16:37:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 16:37:52] HOME_URL="https://www.centos.org/"
[2026-04-01 16:37:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 16:37:52] 
[2026-04-01 16:37:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 16:37:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 16:37:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 16:37:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 16:37:52] 
[2026-04-01 16:37:52] 2026-04-01 14:36:45,791 | INFO     | **************************************
[2026-04-01 16:37:52] 2026-04-01 14:36:46,294 | INFO     | executing command: df -mP /var/lib/boinc/var/slot204/slots/2
[2026-04-01 16:37:52] 2026-04-01 14:36:46,311 | INFO     | sufficient remaining disk space (316650029056 B)
[2026-04-01 16:37:52] 2026-04-01 14:36:46,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 16:37:52] 2026-04-01 14:36:46,311 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 16:37:52] 2026-04-01 14:36:46,311 | INFO     | update_server=False
[2026-04-01 16:37:52] 2026-04-01 14:36:46,311 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-01 16:37:52] 2026-04-01 14:36:46,311 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 16:37:52] 2026-04-01 14:36:46,330 | WARNING  | process 1157506 can no longer be monitored (due to stat problems) - aborting
[2026-04-01 16:37:52] 2026-04-01 14:36:46,478 | INFO     | using path: /var/lib/boinc/var/slot204/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 16:37:52] 2026-04-01 14:36:46,594 | INFO     | all payload control threads have been joined
[2026-04-01 16:37:52] 2026-04-01 14:36:46,654 | INFO     | number of running child processes to parent process 1157506: 1
[2026-04-01 16:37:52] 2026-04-01 14:36:46,655 | INFO     | maximum number of monitored processes: 6
[2026-04-01 16:37:52] 2026-04-01 14:36:46,655 | INFO     | aborting job monitoring since job object (job id=7063224486) has expired
[2026-04-01 16:37:52] 2026-04-01 14:36:46,655 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 16:37:52] 2026-04-01 14:36:46,655 | INFO     | will abort loop
[2026-04-01 16:37:52] 2026-04-01 14:36:46,727 | INFO     | all job control threads have been joined
[2026-04-01 16:37:52] 2026-04-01 14:36:46,857 | INFO     | all data control threads have been joined
[2026-04-01 16:37:52] 2026-04-01 14:36:47,317 | INFO     | [job] retrieve thread has finished
[2026-04-01 16:37:52] 2026-04-01 14:36:47,317 | INFO     | [job] queue monitor thread has finished
[2026-04-01 16:37:52] 2026-04-01 14:36:47,522 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 16:37:52] 2026-04-01 14:36:47,571 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 16:37:52] 2026-04-01 14:36:47,593 | INFO     | [payload] validate_post thread has finished
[2026-04-01 16:37:52] 2026-04-01 14:36:47,599 | INFO     | [payload] control thread has finished
[2026-04-01 16:37:52] 2026-04-01 14:36:47,660 | INFO     | [job] job monitor thread has finished
[2026-04-01 16:37:52] 2026-04-01 14:36:47,733 | INFO     | [job] control thread has finished
[2026-04-01 16:37:52] 2026-04-01 14:36:47,862 | INFO     | [data] control thread has finished
[2026-04-01 16:37:52] 2026-04-01 14:36:48,105 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 16:37:52] 2026-04-01 14:36:48,106 | INFO     | [job] validate thread has finished
[2026-04-01 16:37:52] 2026-04-01 14:36:48,275 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 16:37:52] 2026-04-01 14:36:48,349 | INFO     | [data] copytool_in thread has finished
[2026-04-01 16:37:52] 2026-04-01 14:36:48,382 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 16:37:52] 2026-04-01 14:36:48,570 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 16:37:52] 2026-04-01 14:36:48,665 | INFO     | [payload] failed_post thread has finished
[2026-04-01 16:37:52] 2026-04-01 14:36:49,577 | INFO     | [data] copytool_out thread has finished
[2026-04-01 16:37:52] 2026-04-01 14:36:52,388 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 16:37:52] 2026-04-01 14:37:15,884 | INFO     | PID=1151775 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-01 16:37:52] 2026-04-01 14:37:15,886 | INFO     | .. there are 3 such processes running
[2026-04-01 16:37:52] 2026-04-01 14:37:15,887 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 16:37:52] 2026-04-01 14:37:15,887 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 16:37:52] 2026-04-01 14:37:15,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 16:37:52] 2026-04-01 14:37:45,610 | INFO     | [monitor] cgroup control has ended
[2026-04-01 16:37:52] 2026-04-01 14:37:47,350 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23206761113408)>', '<ExcThread(monitor, started 23206523320064)>']
[2026-04-01 16:37:52] 2026-04-01 14:37:48,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 16:37:52] 2026-04-01 14:37:48,049 | INFO     | [monitor] control thread has ended
[2026-04-01 16:37:52] 2026-04-01 14:37:52,375 | INFO     | all workflow threads have been joined
[2026-04-01 16:37:52] 2026-04-01 14:37:52,376 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 16:37:52] 2026-04-01 14:37:52,376 | INFO     | traces error code: 0
[2026-04-01 16:37:52] 2026-04-01 14:37:52,376 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 16:37:52] 2026-04-01 14:37:52,465 [wrapper] ==== pilot stdout END ====
[2026-04-01 16:37:52] 2026-04-01 14:37:52,468 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 16:37:52] 2026-04-01 14:37:52,469 [wrapper] pilotpid: 1151775
[2026-04-01 16:37:52] 2026-04-01 14:37:52,471 [wrapper] Pilot exit status: 0
[2026-04-01 16:37:52] 2026-04-01 14:37:52,477 [wrapper] pandaids: 7063224486
[2026-04-01 16:37:52] 2026-04-01 14:37:52,544 [wrapper] cleanup supervisor_pilot 1213929 1151776
[2026-04-01 16:37:52] 2026-04-01 14:37:52,546 [wrapper] Test setup, not cleaning
[2026-04-01 16:37:52] 2026-04-01 14:37:52,548 [wrapper] apfmon messages muted
[2026-04-01 16:37:52] 2026-04-01 14:37:52,550 [wrapper] ==== wrapper stdout END ====
[2026-04-01 16:37:52] 2026-04-01 14:37:52,552 [wrapper] ==== wrapper stderr END ====
[2026-04-01 16:37:52]  *** Error codes and diagnostics ***
[2026-04-01 16:37:52]     "exeErrorCode": 0,
[2026-04-01 16:37:52]     "exeErrorDiag": "",
[2026-04-01 16:37:52]     "pilotErrorCode": 0,
[2026-04-01 16:37:52]     "pilotErrorDiag": "",
[2026-04-01 16:37:52]  *** Listing of results directory ***
[2026-04-01 16:37:52] total 465512
[2026-04-01 16:37:52] -rw-r--r--. 1 boinc boinc    585013 Mar 23 14:53 pilot3.tar.gz
[2026-04-01 16:37:52] -rwx------. 1 boinc boinc     36322 Mar 23 14:54 runpilot2-wrapper.sh
[2026-04-01 16:37:52] -rw-r--r--. 1 boinc boinc      5111 Mar 23 14:57 queuedata.json
[2026-04-01 16:37:52] -rw-r--r--. 1 boinc boinc       100 Apr  1 16:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 16:37:52] -rwxr-xr-x. 1 boinc boinc      7986 Apr  1 16:03 run_atlas
[2026-04-01 16:37:52] -rw-r--r--. 1 boinc boinc       105 Apr  1 16:03 job.xml
[2026-04-01 16:37:52] -rw-r--r--. 2 boinc boinc    597537 Apr  1 16:03 input.tar.gz
[2026-04-01 16:37:52] -rw-r--r--. 1 boinc boinc      6710 Apr  1 16:03 init_data.xml
[2026-04-01 16:37:52] -rw-r--r--. 2 boinc boinc 253371801 Apr  1 16:03 EVNT.49128500._000001.pool.root.1
[2026-04-01 16:37:52] -rw-r--r--. 2 boinc boinc     15845 Apr  1 16:03 start_atlas.sh
[2026-04-01 16:37:52] drwxrwx--x. 2 boinc boinc      4096 Apr  1 16:03 shared
[2026-04-01 16:37:52] -rw-r--r--. 1 boinc boinc         0 Apr  1 16:03 boinc_lockfile
[2026-04-01 16:37:52] -rw-r--r--. 1 boinc boinc      2603 Apr  1 16:03 pandaJob.out
[2026-04-01 16:37:52] -rw-------. 1 boinc boinc   1006743 Apr  1 16:03 agis_schedconf.cvmfs.json
[2026-04-01 16:37:52] -rw-------. 1 boinc boinc   1511579 Apr  1 16:03 agis_ddmendpoints.agis.ALL.json
[2026-04-01 16:37:52] -rw-------. 1 boinc boinc       444 Apr  1 16:03 workernode_map.json
[2026-04-01 16:37:52] drwx------. 5 boinc boinc      4096 Apr  1 16:03 pilot3
[2026-04-01 16:37:52] -rw-------. 1 boinc boinc 218020182 Apr  1 16:36 HITS.49191779._000032.pool.root.1
[2026-04-01 16:37:52] -rw-------. 1 boinc boinc      1030 Apr  1 16:36 memory_monitor_summary.json
[2026-04-01 16:37:52] -rw-r--r--. 1 boinc boinc       529 Apr  1 16:36 boinc_task_state.xml
[2026-04-01 16:37:52] -rw-------. 1 boinc boinc    346264 Apr  1 16:36 log.49191779._000032.job.log.tgz.1
[2026-04-01 16:37:52] -rw-------. 1 boinc boinc      6345 Apr  1 16:36 heartbeat.json
[2026-04-01 16:37:52] -rw-------. 1 boinc boinc        95 Apr  1 16:37 pilot_heartbeat.json
[2026-04-01 16:37:52] -rw-r--r--. 1 boinc boinc      8192 Apr  1 16:37 boinc_mmap_file
[2026-04-01 16:37:52] -rw-r--r--. 1 boinc boinc        27 Apr  1 16:37 wrapper_checkpoint.txt
[2026-04-01 16:37:52] -rw-------. 1 boinc boinc      5363 Apr  1 16:37 pilotlog.txt
[2026-04-01 16:37:52] -rw-------. 1 boinc boinc    330372 Apr  1 16:37 log.49191779._000032.job.log.1
[2026-04-01 16:37:52] -rw-------. 1 boinc boinc       357 Apr  1 16:37 output.list
[2026-04-01 16:37:52] -rw-r--r--. 1 boinc boinc       620 Apr  1 16:37 runtime_log
[2026-04-01 16:37:52] -rw-------. 1 boinc boinc    696320 Apr  1 16:37 result.tar.gz
[2026-04-01 16:37:52] -rw-r--r--. 1 boinc boinc      9223 Apr  1 16:37 runtime_log.err
[2026-04-01 16:37:52] -rw-------. 1 boinc boinc       659 Apr  1 16:37 hEhMDmBvuO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmVYAMDmxJPEDn.diag
[2026-04-01 16:37:52] -rw-r--r--. 1 boinc boinc     21328 Apr  1 16:37 stderr.txt
[2026-04-01 16:37:52] HITS file was successfully produced:
[2026-04-01 16:37:52] -rw-------. 1 boinc boinc 218020182 Apr  1 16:36 shared/HITS.pool.root.1
[2026-04-01 16:37:52]  *** Contents of shared directory: ***
[2026-04-01 16:37:52] total 461636
[2026-04-01 16:37:52] -rw-r--r--. 2 boinc boinc    597537 Apr  1 16:03 input.tar.gz
[2026-04-01 16:37:52] -rw-r--r--. 2 boinc boinc 253371801 Apr  1 16:03 ATLAS.root_0
[2026-04-01 16:37:52] -rw-r--r--. 2 boinc boinc     15845 Apr  1 16:03 start_atlas.sh
[2026-04-01 16:37:52] -rw-------. 1 boinc boinc 218020182 Apr  1 16:36 HITS.pool.root.1
[2026-04-01 16:37:52] -rw-------. 1 boinc boinc    696320 Apr  1 16:37 result.tar.gz
16:37:54 (1147247): run_atlas exited; CPU time 21330.449912
16:37:54 (1147247): called boinc_finish(0)

</stderr_txt>
]]>

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