Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:21:34 (3940810): wrapper (7.7.26015): starting
09:21:34 (3940810): wrapper: running run_atlas (--nthreads 12)
[2026-04-01 09:21:34] Arguments: --nthreads 12
[2026-04-01 09:21:34] Threads: 12
[2026-04-01 09:21:34] Checking for CVMFS
[2026-04-01 09:21:34] No cvmfs_config command found, will try listing directly
[2026-04-01 09:21:34] CVMFS is ok
[2026-04-01 09:21:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-01 09:21:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-01 09:21:34] Further information can be found at the LHC@home message board.
[2026-04-01 09:21:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 09:21:34] Checking for apptainer binary...
[2026-04-01 09:21:34] which: no apptainer in ((null))
[2026-04-01 09:21:34] apptainer is not installed, using version from CVMFS
[2026-04-01 09:21:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 09:21:34] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot228/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-04-01 09:21:34] apptainer works
[2026-04-01 09:21:34] Set ATHENA_PROC_NUMBER=12
[2026-04-01 09:21:34] Set ATHENA_CORE_NUMBER=12
[2026-04-01 09:21:34] Starting ATLAS job with PandaID=7063255566
[2026-04-01 09:21:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot228/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 10:25:05]  *** The last 200 lines of the pilot log: ***
[2026-04-01 10:25:05]  is_altstaged=None
[2026-04-01 10:25:05]  is_tar=False
[2026-04-01 10:25:05]  lfn=log.49178731._000286.job.log.tgz.1
[2026-04-01 10:25:05]  mtime=0
[2026-04-01 10:25:05]  protocol_id=None
[2026-04-01 10:25:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-01 10:25:05]  replicas=None
[2026-04-01 10:25:05]  scope=mc23_13p6TeV
[2026-04-01 10:25:05]  status=None
[2026-04-01 10:25:05]  status_code=0
[2026-04-01 10:25:05]  storage_token=
[2026-04-01 10:25:05]  surl=/var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7063255566/log.49178731._000286.job.log.tgz.1
[2026-04-01 10:25:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/4f/log.49178731._000286.job.log.tgz.1
[2026-04-01 10:25:05]  workdir=None
[2026-04-01 10:25:05] ]
[2026-04-01 10:25:05] 2026-04-01 08:24:28,326 | INFO     | transferring file log.49178731._000286.job.log.tgz.1 from /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7063255566/log.49178731._000286.job.log.tgz.1 to /var/lib/
[2026-04-01 10:25:05] 2026-04-01 08:24:28,326 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7063255566/log.49178731._000286.job.log.tgz.1 /var/lib/boinc/var/slot228/slots/1/
[2026-04-01 10:25:05] 2026-04-01 08:24:28,341 | INFO     | adding to output.list: log.49178731._000286.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/4f/log.49178731._000286.job.log.tg
[2026-04-01 10:25:05] 2026-04-01 08:24:28,341 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-01 10:25:05] 2026-04-01 08:24:28,341 | INFO     | summary of transferred files:
[2026-04-01 10:25:05] 2026-04-01 08:24:28,341 | INFO     |  -- lfn=log.49178731._000286.job.log.tgz.1, status_code=0, status=transferred
[2026-04-01 10:25:05] 2026-04-01 08:24:28,342 | INFO     | stage-out finished correctly
[2026-04-01 10:25:05] 2026-04-01 08:24:28,879 | INFO     | monitor loop #281: job 0:7063255566 is in state 'finished'
[2026-04-01 10:25:05] 2026-04-01 08:24:28,879 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-01 10:25:05] 2026-04-01 08:24:29,637 | INFO     | time since job start (3765s) is within the limit (345600.0s)
[2026-04-01 10:25:05] 2026-04-01 08:24:31,382 | INFO     | monitor loop #282: job 0:7063255566 is in state 'finished'
[2026-04-01 10:25:05] 2026-04-01 08:24:31,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-01 10:25:05] 2026-04-01 08:24:31,643 | INFO     | time since job start (3767s) is within the limit (345600.0s)
[2026-04-01 10:25:05] 2026-04-01 08:24:31,685 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-01 10:25:05] 2026-04-01 08:24:32,206 | INFO     | job 7063255566 has state=finished
[2026-04-01 10:25:05] 2026-04-01 08:24:32,206 | INFO     | preparing for final server update for job 7063255566 in state='finished'
[2026-04-01 10:25:05] 2026-04-01 08:24:32,207 | INFO     | reading metadata from: /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7063255566/jobReport.json
[2026-04-01 10:25:05] 2026-04-01 08:24:32,208 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot228/slots/1/workernode_map.json
[2026-04-01 10:25:05] 2026-04-01 08:24:32,208 | INFO     | this job has now completed (state=finished)
[2026-04-01 10:25:05] 2026-04-01 08:24:32,208 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-01 10:25:05] 2026-04-01 08:24:32,208 | INFO     | log transfer has been attempted: DONE
[2026-04-01 10:25:05] 2026-04-01 08:24:32,208 | INFO     | job 7063255566 has finished - writing final server update
[2026-04-01 10:25:05] 2026-04-01 08:24:32,209 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_9349/.job.ad'
[2026-04-01 10:25:05] 2026-04-01 08:24:32,209 | INFO     | total number of processed events: 400 (read)
[2026-04-01 10:25:05] 2026-04-01 08:24:32,225 | INFO     | using path: /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7063255566/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 10:25:05] 2026-04-01 08:24:32,226 | INFO     | extracted standard info from prmon json
[2026-04-01 10:25:05] 2026-04-01 08:24:32,226 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 10:25:05] 2026-04-01 08:24:32,226 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-01 10:25:05] 2026-04-01 08:24:32,226 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 10:25:05] 2026-04-01 08:24:32,226 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 10:25:05] 2026-04-01 08:24:32,227 | INFO     | fitting pss+swap vs Time
[2026-04-01 10:25:05] 2026-04-01 08:24:32,227 | INFO     | sum of square deviations: 51573060.0
[2026-04-01 10:25:05] 2026-04-01 08:24:32,227 | INFO     | sum of deviations: 58629295.99999991
[2026-04-01 10:25:05] 2026-04-01 08:24:32,227 | INFO     | mean x: 1775030078.0
[2026-04-01 10:25:05] 2026-04-01 08:24:32,227 | INFO     | mean y: 2750144.5090909093
[2026-04-01 10:25:05] 2026-04-01 08:24:32,227 | INFO     | intersect: -2015139890.5589259
[2026-04-01 10:25:05] 2026-04-01 08:24:32,227 | INFO     | chi2: 0.004946439479972853
[2026-04-01 10:25:05] 2026-04-01 08:24:32,227 | INFO     | current memory leak: 1.14 B/s (using 55 data points, chi2=0.00)
[2026-04-01 10:25:05] 2026-04-01 08:24:32,228 | INFO     | could have reported an average CPU frequency of 3588 MHz (6 samples)
[2026-04-01 10:25:05] 2026-04-01 08:24:32,228 | INFO     | ..............................
[2026-04-01 10:25:05] 2026-04-01 08:24:32,228 | INFO     | . Timing measurements:
[2026-04-01 10:25:05] 2026-04-01 08:24:32,228 | INFO     | . get job = 0 s
[2026-04-01 10:25:05] 2026-04-01 08:24:32,228 | INFO     | . initial setup = 4 s
[2026-04-01 10:25:05] 2026-04-01 08:24:32,228 | INFO     | . payload setup = 6 s
[2026-04-01 10:25:05] 2026-04-01 08:24:32,228 | INFO     | . stage-in = 0 s
[2026-04-01 10:25:05] 2026-04-01 08:24:32,228 | INFO     | . payload execution = 3742 s
[2026-04-01 10:25:05] 2026-04-01 08:24:32,228 | INFO     | . stage-out = 0 s
[2026-04-01 10:25:05] 2026-04-01 08:24:32,228 | INFO     | . log creation = 0 s
[2026-04-01 10:25:05] 2026-04-01 08:24:32,228 | INFO     | ..............................
[2026-04-01 10:25:05] 2026-04-01 08:24:32,275 | INFO     | 
[2026-04-01 10:25:05] 2026-04-01 08:24:32,275 | INFO     | job summary report
[2026-04-01 10:25:05] 2026-04-01 08:24:32,275 | INFO     | --------------------------------------------------
[2026-04-01 10:25:05] 2026-04-01 08:24:32,275 | INFO     | PanDA job id: 7063255566
[2026-04-01 10:25:05] 2026-04-01 08:24:32,275 | INFO     | task id: 49178731
[2026-04-01 10:25:05] 2026-04-01 08:24:32,275 | INFO     | errors: (none)
[2026-04-01 10:25:05] 2026-04-01 08:24:32,275 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 10:25:05] 2026-04-01 08:24:32,275 | INFO     | pilot state: finished 
[2026-04-01 10:25:05] 2026-04-01 08:24:32,276 | INFO     | transexitcode: 0
[2026-04-01 10:25:05] 2026-04-01 08:24:32,276 | INFO     | exeerrorcode: 0
[2026-04-01 10:25:05] 2026-04-01 08:24:32,276 | INFO     | exeerrordiag: 
[2026-04-01 10:25:05] 2026-04-01 08:24:32,276 | INFO     | exitcode: 0
[2026-04-01 10:25:05] 2026-04-01 08:24:32,276 | INFO     | exitmsg: OK
[2026-04-01 10:25:05] 2026-04-01 08:24:32,276 | INFO     | cpuconsumptiontime: 40346 s
[2026-04-01 10:25:05] 2026-04-01 08:24:32,276 | INFO     | nevents: 400
[2026-04-01 10:25:05] 2026-04-01 08:24:32,276 | INFO     | neventsw: 0
[2026-04-01 10:25:05] 2026-04-01 08:24:32,276 | INFO     | pid: 3962905
[2026-04-01 10:25:05] 2026-04-01 08:24:32,276 | INFO     | pgrp: 3962905
[2026-04-01 10:25:05] 2026-04-01 08:24:32,276 | INFO     | corecount: 12
[2026-04-01 10:25:05] 2026-04-01 08:24:32,276 | INFO     | event service: False
[2026-04-01 10:25:05] 2026-04-01 08:24:32,276 | INFO     | sizes: {0: 2280205, 11: 2280205, 3752: 2315073, 3755: 2315073, 3756: 2315267}
[2026-04-01 10:25:05] 2026-04-01 08:24:32,276 | INFO     | --------------------------------------------------
[2026-04-01 10:25:05] 2026-04-01 08:24:32,276 | INFO     | 
[2026-04-01 10:25:05] 2026-04-01 08:24:32,276 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot228/slots/1
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 10:25:05] 2026-04-01 08:24:32,293 | INFO     | job 7063255566 has completed (purged errors)
[2026-04-01 10:25:05] 2026-04-01 08:24:32,294 | INFO     | overall cleanup function is called
[2026-04-01 10:25:05] 2026-04-01 08:24:33,301 | INFO     | --- collectZombieJob: --- 10, [3962905]
[2026-04-01 10:25:05] 2026-04-01 08:24:33,301 | INFO     | zombie collector waiting for pid 3962905
[2026-04-01 10:25:05] 2026-04-01 08:24:33,301 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 10:25:05] 2026-04-01 08:24:33,301 | INFO     | collected zombie processes
[2026-04-01 10:25:05] 2026-04-01 08:24:33,301 | INFO     | will attempt to kill all subprocesses of pid=3962905
[2026-04-01 10:25:05] 2026-04-01 08:24:33,510 | INFO     | process IDs to be killed: [3962905] (in reverse order)
[2026-04-01 10:25:05] 2026-04-01 08:24:33,625 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 10:25:05] 2026-04-01 08:24:33,625 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 10:25:05] 2026-04-01 08:24:33,646 | INFO     | did not find any defunct processes belonging to 3962905
[2026-04-01 10:25:05] 2026-04-01 08:24:33,664 | INFO     | did not find any defunct processes belonging to 3962905
[2026-04-01 10:25:05] 2026-04-01 08:24:33,664 | INFO     | ready for new job
[2026-04-01 10:25:05] 2026-04-01 08:24:33,664 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-01 10:25:05] 2026-04-01 08:24:33,665 | INFO     | **************************************
[2026-04-01 10:25:05] 2026-04-01 08:24:33,665 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-01 10:25:05] 2026-04-01 08:24:33,665 | INFO     | **************************************
[2026-04-01 10:25:05] 2026-04-01 08:24:33,665 | INFO     | 
[2026-04-01 10:25:05] 2026-04-01 08:24:33,672 | INFO     | architecture information:
[2026-04-01 10:25:05] 2026-04-01 08:24:33,672 | INFO     | executing command: cat /etc/os-release
[2026-04-01 10:25:05] 2026-04-01 08:24:33,686 | INFO     | cat /etc/os-release:
[2026-04-01 10:25:05] NAME="CentOS Linux"
[2026-04-01 10:25:05] VERSION="7 (Core)"
[2026-04-01 10:25:05] ID="centos"
[2026-04-01 10:25:05] ID_LIKE="rhel fedora"
[2026-04-01 10:25:05] VERSION_ID="7"
[2026-04-01 10:25:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 10:25:05] ANSI_COLOR="0;31"
[2026-04-01 10:25:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 10:25:05] HOME_URL="https://www.centos.org/"
[2026-04-01 10:25:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 10:25:05] 
[2026-04-01 10:25:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 10:25:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 10:25:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 10:25:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 10:25:05] 
[2026-04-01 10:25:05] 2026-04-01 08:24:33,686 | INFO     | **************************************
[2026-04-01 10:25:05] 2026-04-01 08:24:34,189 | INFO     | executing command: df -mP /var/lib/boinc/var/slot228/slots/1
[2026-04-01 10:25:05] 2026-04-01 08:24:34,204 | INFO     | sufficient remaining disk space (303379251200 B)
[2026-04-01 10:25:05] 2026-04-01 08:24:34,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 10:25:05] 2026-04-01 08:24:34,204 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 10:25:05] 2026-04-01 08:24:34,204 | INFO     | update_server=False
[2026-04-01 10:25:05] 2026-04-01 08:24:34,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-01 10:25:05] 2026-04-01 08:24:34,205 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 10:25:05] 2026-04-01 08:24:34,205 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 10:25:05] 2026-04-01 08:24:34,205 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 10:25:05] 2026-04-01 08:24:34,306 | INFO     | all payload control threads have been joined
[2026-04-01 10:25:05] 2026-04-01 08:24:34,541 | INFO     | all data control threads have been joined
[2026-04-01 10:25:05] 2026-04-01 08:24:34,890 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 10:25:05] 2026-04-01 08:24:34,891 | INFO     | aborting loop
[2026-04-01 10:25:05] 2026-04-01 08:24:35,210 | INFO     | [job] retrieve thread has finished
[2026-04-01 10:25:05] 2026-04-01 08:24:35,211 | INFO     | [job] queue monitor thread has finished
[2026-04-01 10:25:05] 2026-04-01 08:24:35,253 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 10:25:05] 2026-04-01 08:24:35,312 | INFO     | [payload] control thread has finished
[2026-04-01 10:25:05] 2026-04-01 08:24:35,322 | INFO     | [payload] validate_post thread has finished
[2026-04-01 10:25:05] 2026-04-01 08:24:35,547 | INFO     | [data] control thread has finished
[2026-04-01 10:25:05] 2026-04-01 08:24:35,887 | INFO     | all job control threads have been joined
[2026-04-01 10:25:05] 2026-04-01 08:24:35,896 | INFO     | [job] job monitor thread has finished
[2026-04-01 10:25:05] 2026-04-01 08:24:36,044 | INFO     | [payload] failed_post thread has finished
[2026-04-01 10:25:05] 2026-04-01 08:24:36,180 | INFO     | [job] validate thread has finished
[2026-04-01 10:25:05] 2026-04-01 08:24:36,211 | INFO     | [data] copytool_out thread has finished
[2026-04-01 10:25:05] 2026-04-01 08:24:36,375 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 10:25:05] 2026-04-01 08:24:36,381 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 10:25:05] 2026-04-01 08:24:36,442 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 10:25:05] 2026-04-01 08:24:36,653 | INFO     | [data] copytool_in thread has finished
[2026-04-01 10:25:05] 2026-04-01 08:24:36,892 | INFO     | [job] control thread has finished
[2026-04-01 10:25:05] 2026-04-01 08:24:38,211 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 10:25:05] 2026-04-01 08:24:50,010 | INFO     | [monitor] cgroup control has ended
[2026-04-01 10:25:05] 2026-04-01 08:24:52,053 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22798598043456)>', '<ExcThread(monitor, started 22798290384640)>']
[2026-04-01 10:25:05] 2026-04-01 08:24:57,079 | INFO     | all workflow threads have been joined
[2026-04-01 10:25:05] 2026-04-01 08:24:57,079 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 10:25:05] 2026-04-01 08:24:57,079 | INFO     | traces error code: 0
[2026-04-01 10:25:05] 2026-04-01 08:24:57,079 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 10:25:05] 2026-04-01 08:25:05,134 | INFO     | PID=3948705 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-01 10:25:05] 2026-04-01 08:25:05,134 | INFO     | .. there are 9 such processes running
[2026-04-01 10:25:05] 2026-04-01 08:25:05,135 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 10:25:05] 2026-04-01 08:25:05,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 10:25:05] 2026-04-01 08:25:05,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 10:25:05] 2026-04-01 08:25:05,135 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 10:25:05] 2026-04-01 08:25:05,135 | CRITICAL | thread 'MainThread' is not alive
[2026-04-01 10:25:05] 2026-04-01 08:25:05,135 | INFO     | [monitor] control thread has ended
[2026-04-01 10:25:05] 2026-04-01 08:25:05,236 [wrapper] ==== pilot stdout END ====
[2026-04-01 10:25:05] 2026-04-01 08:25:05,239 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 10:25:05] 2026-04-01 08:25:05,241 [wrapper] pilotpid: 3948705
[2026-04-01 10:25:05] 2026-04-01 08:25:05,242 [wrapper] Pilot exit status: 0
[2026-04-01 10:25:05] 2026-04-01 08:25:05,249 [wrapper] pandaids: 7063255566
[2026-04-01 10:25:05] 2026-04-01 08:25:05,341 [wrapper] cleanup supervisor_pilot    8576 3948706
[2026-04-01 10:25:05] 2026-04-01 08:25:05,343 [wrapper] Test setup, not cleaning
[2026-04-01 10:25:05] 2026-04-01 08:25:05,345 [wrapper] apfmon messages muted
[2026-04-01 10:25:05] 2026-04-01 08:25:05,347 [wrapper] ==== wrapper stdout END ====
[2026-04-01 10:25:05] 2026-04-01 08:25:05,349 [wrapper] ==== wrapper stderr END ====
[2026-04-01 10:25:05]  *** Error codes and diagnostics ***
[2026-04-01 10:25:05]     "exeErrorCode": 0,
[2026-04-01 10:25:05]     "exeErrorDiag": "",
[2026-04-01 10:25:05]     "pilotErrorCode": 0,
[2026-04-01 10:25:05]     "pilotErrorDiag": "",
[2026-04-01 10:25:05]  *** Listing of results directory ***
[2026-04-01 10:25:05] total 470348
[2026-04-01 10:25:05] -rw-r--r--. 1 boinc boinc    585013 Mar 23 14:53 pilot3.tar.gz
[2026-04-01 10:25:05] -rwx------. 1 boinc boinc     36322 Mar 23 14:54 runpilot2-wrapper.sh
[2026-04-01 10:25:05] -rw-r--r--. 1 boinc boinc      5111 Mar 23 14:56 queuedata.json
[2026-04-01 10:25:05] -rw-r--r--. 1 boinc boinc       100 Apr  1 09:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 10:25:05] -rwxr-xr-x. 1 boinc boinc      7986 Apr  1 09:21 run_atlas
[2026-04-01 10:25:05] -rw-r--r--. 1 boinc boinc       105 Apr  1 09:21 job.xml
[2026-04-01 10:25:05] -rw-r--r--. 2 boinc boinc 244429010 Apr  1 09:21 EVNT.49129589._000009.pool.root.1
[2026-04-01 10:25:05] -rw-r--r--. 2 boinc boinc     15845 Apr  1 09:21 start_atlas.sh
[2026-04-01 10:25:05] drwxrwx--x. 2 boinc boinc      4096 Apr  1 09:21 shared
[2026-04-01 10:25:05] -rw-r--r--. 2 boinc boinc    597547 Apr  1 09:21 input.tar.gz
[2026-04-01 10:25:05] -rw-r--r--. 1 boinc boinc      6710 Apr  1 09:21 init_data.xml
[2026-04-01 10:25:05] -rw-r--r--. 1 boinc boinc         0 Apr  1 09:21 boinc_lockfile
[2026-04-01 10:25:05] -rw-r--r--. 1 boinc boinc      2606 Apr  1 09:21 pandaJob.out
[2026-04-01 10:25:05] -rw-------. 1 boinc boinc   1004631 Apr  1 09:21 agis_schedconf.cvmfs.json
[2026-04-01 10:25:05] -rw-------. 1 boinc boinc   1511579 Apr  1 09:21 agis_ddmendpoints.agis.ALL.json
[2026-04-01 10:25:05] -rw-------. 1 boinc boinc       444 Apr  1 09:21 workernode_map.json
[2026-04-01 10:25:05] drwx------. 5 boinc boinc      4096 Apr  1 09:21 pilot3
[2026-04-01 10:25:05] -rw-------. 1 boinc boinc 231343915 Apr  1 10:24 HITS.49178731._000286.pool.root.1
[2026-04-01 10:25:05] -rw-r--r--. 1 boinc boinc       529 Apr  1 10:24 boinc_task_state.xml
[2026-04-01 10:25:05] -rw-------. 1 boinc boinc      1027 Apr  1 10:24 memory_monitor_summary.json
[2026-04-01 10:25:05] -rw-------. 1 boinc boinc    389710 Apr  1 10:24 log.49178731._000286.job.log.tgz.1
[2026-04-01 10:25:05] -rw-------. 1 boinc boinc      6348 Apr  1 10:24 heartbeat.json
[2026-04-01 10:25:05] -rw-------. 1 boinc boinc       892 Apr  1 10:25 pilotlog.txt
[2026-04-01 10:25:05] -rw-------. 1 boinc boinc        95 Apr  1 10:25 pilot_heartbeat.json
[2026-04-01 10:25:05] -rw-r--r--. 1 boinc boinc      8192 Apr  1 10:25 boinc_mmap_file
[2026-04-01 10:25:05] -rw-r--r--. 1 boinc boinc        27 Apr  1 10:25 wrapper_checkpoint.txt
[2026-04-01 10:25:05] -rw-------. 1 boinc boinc    571274 Apr  1 10:25 log.49178731._000286.job.log.1
[2026-04-01 10:25:05] -rw-------. 1 boinc boinc       357 Apr  1 10:25 output.list
[2026-04-01 10:25:05] -rw-r--r--. 1 boinc boinc       620 Apr  1 10:25 runtime_log
[2026-04-01 10:25:05] -rw-------. 1 boinc boinc    983040 Apr  1 10:25 result.tar.gz
[2026-04-01 10:25:05] -rw-r--r--. 1 boinc boinc      9223 Apr  1 10:25 runtime_log.err
[2026-04-01 10:25:05] -rw-------. 1 boinc boinc       661 Apr  1 10:25 XkqKDmxuuO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvVAMDmibbEJo.diag
[2026-04-01 10:25:05] -rw-r--r--. 1 boinc boinc     21340 Apr  1 10:25 stderr.txt
[2026-04-01 10:25:05] HITS file was successfully produced:
[2026-04-01 10:25:05] -rw-------. 1 boinc boinc 231343915 Apr  1 10:24 shared/HITS.pool.root.1
[2026-04-01 10:25:05]  *** Contents of shared directory: ***
[2026-04-01 10:25:05] total 466196
[2026-04-01 10:25:05] -rw-r--r--. 2 boinc boinc 244429010 Apr  1 09:21 ATLAS.root_0
[2026-04-01 10:25:05] -rw-r--r--. 2 boinc boinc     15845 Apr  1 09:21 start_atlas.sh
[2026-04-01 10:25:05] -rw-r--r--. 2 boinc boinc    597547 Apr  1 09:21 input.tar.gz
[2026-04-01 10:25:05] -rw-------. 1 boinc boinc 231343915 Apr  1 10:24 HITS.pool.root.1
[2026-04-01 10:25:05] -rw-------. 1 boinc boinc    983040 Apr  1 10:25 result.tar.gz
10:25:07 (3940810): run_atlas exited; CPU time 40468.552861
10:25:07 (3940810): called boinc_finish(0)

</stderr_txt>
]]>

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