Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:24:47 (3689128): wrapper (7.7.26015): starting
17:24:47 (3689128): wrapper: running run_atlas (--nthreads 10)
[2026-03-31 17:24:47] Arguments: --nthreads 10
[2026-03-31 17:24:47] Threads: 10
[2026-03-31 17:24:47] Checking for CVMFS
[2026-03-31 17:24:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 17:24:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 17:24:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 17:24:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 17:24:48] 2.13.3.0 7314 210525 327748 157932 1 465 38648859 40960000 15684 16776704 0 2624733556 99.756 1765083808 46306 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-31 17:24:48] CVMFS is ok
[2026-03-31 17:24:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 17:24:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 17:24:48] Further information can be found at the LHC@home message board.
[2026-03-31 17:24:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 17:24:48] Checking for apptainer binary...
[2026-03-31 17:24:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 17:24:48] Running /usr/bin/apptainer --version
[2026-03-31 17:24:48] apptainer version 1.4.5-2.el9
[2026-03-31 17:24:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 17:24:48] c8-16-1.aglt2.org
[2026-03-31 17:24:48] apptainer works
[2026-03-31 17:24:48] Set ATHENA_PROC_NUMBER=10
[2026-03-31 17:24:48] Set ATHENA_CORE_NUMBER=10
[2026-03-31 17:24:48] Starting ATLAS job with PandaID=7063239633
[2026-03-31 17:24:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 18:52:17]  *** The last 200 lines of the pilot log: ***
[2026-03-31 18:52:17]  guid=c8e57a0d-0f7a-4d72-ad65-8cc789e7e6bb
[2026-03-31 18:52:17]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-31 18:52:17]  is_altstaged=None
[2026-03-31 18:52:17]  is_tar=False
[2026-03-31 18:52:17]  lfn=log.49272304._000074.job.log.tgz.1
[2026-03-31 18:52:17]  mtime=0
[2026-03-31 18:52:17]  protocol_id=None
[2026-03-31 18:52:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-31 18:52:17]  replicas=None
[2026-03-31 18:52:17]  scope=mc23_13p6TeV
[2026-03-31 18:52:17]  status=None
[2026-03-31 18:52:17]  status_code=0
[2026-03-31 18:52:17]  storage_token=
[2026-03-31 18:52:17]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-7063239633/log.49272304._000074.job.log.tgz.1
[2026-03-31 18:52:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/93/log.49272304._000074.job.log.tgz.1
[2026-03-31 18:52:17]  workdir=None
[2026-03-31 18:52:17] ]
[2026-03-31 18:52:17] 2026-03-31 22:51:35,457 | INFO     | transferring file log.49272304._000074.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-7063239633/log.49272304._000074.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-31 18:52:17] 2026-03-31 22:51:35,458 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-7063239633/log.49272304._000074.job.log.tgz.1 /tmp/boinchome/slots/1/log.49272304._000074.job
[2026-03-31 18:52:17] 2026-03-31 22:51:35,479 | INFO     | adding to output.list: log.49272304._000074.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/93/log.49272304._000074.job.log.tg
[2026-03-31 18:52:17] 2026-03-31 22:51:35,480 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-31 18:52:17] 2026-03-31 22:51:35,480 | INFO     | summary of transferred files:
[2026-03-31 18:52:17] 2026-03-31 22:51:35,480 | INFO     |  -- lfn=log.49272304._000074.job.log.tgz.1, status_code=0, status=transferred
[2026-03-31 18:52:17] 2026-03-31 22:51:35,481 | INFO     | stage-out finished correctly
[2026-03-31 18:52:17] 2026-03-31 22:51:35,540 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-31 18:52:17] 2026-03-31 22:51:35,790 | INFO     | PID=3696410 has CPU usage=17.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-31 18:52:17] 2026-03-31 22:51:35,790 | INFO     | .. there are 19 such processes running
[2026-03-31 18:52:17] 2026-03-31 22:51:36,791 | INFO     | time since job start (5194s) is within the limit (345600.0s)
[2026-03-31 18:52:17] 2026-03-31 22:51:37,144 | INFO     | job 7063239633 has state=finished
[2026-03-31 18:52:17] 2026-03-31 22:51:37,145 | INFO     | preparing for final server update for job 7063239633 in state='finished'
[2026-03-31 18:52:17] 2026-03-31 22:51:37,145 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7063239633/jobReport.json
[2026-03-31 18:52:17] 2026-03-31 22:51:37,147 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-03-31 18:52:17] 2026-03-31 22:51:37,147 | INFO     | this job has now completed (state=finished)
[2026-03-31 18:52:17] 2026-03-31 22:51:37,147 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 18:52:17] 2026-03-31 22:51:37,147 | INFO     | log transfer has been attempted: DONE
[2026-03-31 18:52:17] 2026-03-31 22:51:37,147 | INFO     | job 7063239633 has finished - writing final server update
[2026-03-31 18:52:17] 2026-03-31 22:51:37,147 | INFO     | total number of processed events: 400 (read)
[2026-03-31 18:52:17] 2026-03-31 22:51:37,161 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7063239633/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 18:52:17] 2026-03-31 22:51:37,161 | INFO     | extracted standard info from prmon json
[2026-03-31 18:52:17] 2026-03-31 22:51:37,161 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 18:52:17] 2026-03-31 22:51:37,161 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-31 18:52:17] 2026-03-31 22:51:37,161 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 18:52:17] 2026-03-31 22:51:37,161 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 18:52:17] 2026-03-31 22:51:37,162 | INFO     | fitting pss+swap vs Time
[2026-03-31 18:52:17] 2026-03-31 22:51:37,162 | INFO     | sum of square deviations: 147126479.5
[2026-03-31 18:52:17] 2026-03-31 22:51:37,163 | INFO     | sum of deviations: -1662075906.0
[2026-03-31 18:52:17] 2026-03-31 22:51:37,163 | INFO     | mean x: 1774994980.5
[2026-03-31 18:52:17] 2026-03-31 22:51:37,163 | INFO     | mean y: 2670810.3846153845
[2026-03-31 18:52:17] 2026-03-31 22:51:37,163 | INFO     | intersect: 20054645141.490597
[2026-03-31 18:52:17] 2026-03-31 22:51:37,163 | INFO     | chi2: 0.003998816567745767
[2026-03-31 18:52:17] 2026-03-31 22:51:37,163 | INFO     | current memory leak: -11.30 B/s (using 78 data points, chi2=0.00)
[2026-03-31 18:52:17] 2026-03-31 22:51:37,163 | INFO     | could have reported an average CPU frequency of 3739 MHz (6 samples)
[2026-03-31 18:52:17] 2026-03-31 22:51:37,163 | INFO     | ..............................
[2026-03-31 18:52:17] 2026-03-31 22:51:37,163 | INFO     | . Timing measurements:
[2026-03-31 18:52:17] 2026-03-31 22:51:37,163 | INFO     | . get job = 0 s
[2026-03-31 18:52:17] 2026-03-31 22:51:37,163 | INFO     | . initial setup = 6 s
[2026-03-31 18:52:17] 2026-03-31 22:51:37,163 | INFO     | . payload setup = 8 s
[2026-03-31 18:52:17] 2026-03-31 22:51:37,163 | INFO     | . stage-in = 0 s
[2026-03-31 18:52:17] 2026-03-31 22:51:37,163 | INFO     | . payload execution = 5167 s
[2026-03-31 18:52:17] 2026-03-31 22:51:37,163 | INFO     | . stage-out = 1 s
[2026-03-31 18:52:17] 2026-03-31 22:51:37,164 | INFO     | . log creation = 0 s
[2026-03-31 18:52:17] 2026-03-31 22:51:37,164 | INFO     | ..............................
[2026-03-31 18:52:17] 2026-03-31 22:51:37,219 | INFO     | 
[2026-03-31 18:52:17] 2026-03-31 22:51:37,219 | INFO     | job summary report
[2026-03-31 18:52:17] 2026-03-31 22:51:37,219 | INFO     | --------------------------------------------------
[2026-03-31 18:52:17] 2026-03-31 22:51:37,219 | INFO     | PanDA job id: 7063239633
[2026-03-31 18:52:17] 2026-03-31 22:51:37,219 | INFO     | task id: 49272304
[2026-03-31 18:52:17] 2026-03-31 22:51:37,219 | INFO     | errors: (none)
[2026-03-31 18:52:17] 2026-03-31 22:51:37,219 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 18:52:17] 2026-03-31 22:51:37,219 | INFO     | pilot state: finished 
[2026-03-31 18:52:17] 2026-03-31 22:51:37,219 | INFO     | transexitcode: 0
[2026-03-31 18:52:17] 2026-03-31 22:51:37,219 | INFO     | exeerrorcode: 0
[2026-03-31 18:52:17] 2026-03-31 22:51:37,219 | INFO     | exeerrordiag: 
[2026-03-31 18:52:17] 2026-03-31 22:51:37,219 | INFO     | exitcode: 0
[2026-03-31 18:52:17] 2026-03-31 22:51:37,219 | INFO     | exitmsg: OK
[2026-03-31 18:52:17] 2026-03-31 22:51:37,219 | INFO     | cpuconsumptiontime: 33206 s
[2026-03-31 18:52:17] 2026-03-31 22:51:37,219 | INFO     | nevents: 400
[2026-03-31 18:52:17] 2026-03-31 22:51:37,220 | INFO     | neventsw: 0
[2026-03-31 18:52:17] 2026-03-31 22:51:37,220 | INFO     | pid: 3724282
[2026-03-31 18:52:17] 2026-03-31 22:51:37,220 | INFO     | pgrp: 3724282
[2026-03-31 18:52:17] 2026-03-31 22:51:37,220 | INFO     | corecount: 10
[2026-03-31 18:52:17] 2026-03-31 22:51:37,220 | INFO     | event service: False
[2026-03-31 18:52:17] 2026-03-31 22:51:37,220 | INFO     | sizes: {0: 2280248, 11: 2280248, 5180: 2306751, 5182: 2315805, 5183: 2315943}
[2026-03-31 18:52:17] 2026-03-31 22:51:37,220 | INFO     | --------------------------------------------------
[2026-03-31 18:52:17] 2026-03-31 22:51:37,220 | INFO     | 
[2026-03-31 18:52:17] 2026-03-31 22:51:37,220 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-31 18:52:17] 2026-03-31 22:51:37,240 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,240 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,240 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,240 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,240 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,240 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,240 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,240 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,240 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,240 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,240 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,240 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,240 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,240 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,241 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,241 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,241 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 18:52:17] 2026-03-31 22:51:37,241 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,241 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 18:52:17] 2026-03-31 22:51:37,241 | INFO     | job 7063239633 has completed (purged errors)
[2026-03-31 18:52:17] 2026-03-31 22:51:37,241 | INFO     | overall cleanup function is called
[2026-03-31 18:52:17] 2026-03-31 22:51:38,248 | INFO     | --- collectZombieJob: --- 10, [3724282]
[2026-03-31 18:52:17] 2026-03-31 22:51:38,249 | INFO     | zombie collector waiting for pid 3724282
[2026-03-31 18:52:17] 2026-03-31 22:51:38,249 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 18:52:17] 2026-03-31 22:51:38,249 | INFO     | collected zombie processes
[2026-03-31 18:52:17] 2026-03-31 22:51:38,249 | INFO     | will attempt to kill all subprocesses of pid=3724282
[2026-03-31 18:52:17] 2026-03-31 22:51:38,689 | INFO     | process IDs to be killed: [3724282] (in reverse order)
[2026-03-31 18:52:17] 2026-03-31 22:51:38,855 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 18:52:17] 2026-03-31 22:51:38,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 18:52:17] 2026-03-31 22:51:38,883 | INFO     | did not find any defunct processes belonging to 3724282
[2026-03-31 18:52:17] 2026-03-31 22:51:38,906 | INFO     | did not find any defunct processes belonging to 3724282
[2026-03-31 18:52:17] 2026-03-31 22:51:38,907 | INFO     | ready for new job
[2026-03-31 18:52:17] 2026-03-31 22:51:38,907 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-31 18:52:17] 2026-03-31 22:51:38,908 | INFO     | **************************************
[2026-03-31 18:52:17] 2026-03-31 22:51:38,908 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-31 18:52:17] 2026-03-31 22:51:38,908 | INFO     | **************************************
[2026-03-31 18:52:17] 2026-03-31 22:51:38,909 | INFO     | 
[2026-03-31 18:52:17] 2026-03-31 22:51:38,913 | INFO     | architecture information:
[2026-03-31 18:52:17] 2026-03-31 22:51:38,913 | INFO     | executing command: cat /etc/os-release
[2026-03-31 18:52:17] 2026-03-31 22:51:38,930 | INFO     | cat /etc/os-release:
[2026-03-31 18:52:17] NAME="CentOS Linux"
[2026-03-31 18:52:17] VERSION="7 (Core)"
[2026-03-31 18:52:17] ID="centos"
[2026-03-31 18:52:17] ID_LIKE="rhel fedora"
[2026-03-31 18:52:17] VERSION_ID="7"
[2026-03-31 18:52:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 18:52:17] ANSI_COLOR="0;31"
[2026-03-31 18:52:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 18:52:17] HOME_URL="https://www.centos.org/"
[2026-03-31 18:52:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 18:52:17] 
[2026-03-31 18:52:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 18:52:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 18:52:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 18:52:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 18:52:17] 
[2026-03-31 18:52:17] 2026-03-31 22:51:38,930 | INFO     | **************************************
[2026-03-31 18:52:17] 2026-03-31 22:51:39,433 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-31 18:52:17] 2026-03-31 22:51:39,452 | INFO     | sufficient remaining disk space (171002822656 B)
[2026-03-31 18:52:17] 2026-03-31 22:51:39,452 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 18:52:17] 2026-03-31 22:51:39,453 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 18:52:17] 2026-03-31 22:51:39,453 | INFO     | update_server=False
[2026-03-31 18:52:17] 2026-03-31 22:51:39,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-31 18:52:17] 2026-03-31 22:51:39,453 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 18:52:17] 2026-03-31 22:51:39,928 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-31 18:52:17] 2026-03-31 22:51:39,928 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-31 18:52:17] 2026-03-31 22:51:39,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 18:52:17] 2026-03-31 22:51:39,928 | INFO     | will abort loop
[2026-03-31 18:52:17] 2026-03-31 22:51:39,966 | INFO     | all payload control threads have been joined
[2026-03-31 18:52:17] 2026-03-31 22:51:40,019 | INFO     | job.realtimelogging is not enabled
[2026-03-31 18:52:17] 2026-03-31 22:51:40,173 | INFO     | all job control threads have been joined
[2026-03-31 18:52:17] 2026-03-31 22:51:40,303 | INFO     | all data control threads have been joined
[2026-03-31 18:52:17] 2026-03-31 22:51:40,458 | INFO     | [job] retrieve thread has finished
[2026-03-31 18:52:17] 2026-03-31 22:51:40,464 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 18:52:17] 2026-03-31 22:51:40,899 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 18:52:17] 2026-03-31 22:51:40,934 | INFO     | [job] job monitor thread has finished
[2026-03-31 18:52:17] 2026-03-31 22:51:40,952 | INFO     | [payload] validate_post thread has finished
[2026-03-31 18:52:17] 2026-03-31 22:51:40,956 | INFO     | [job] validate thread has finished
[2026-03-31 18:52:17] 2026-03-31 22:51:40,971 | INFO     | [payload] control thread has finished
[2026-03-31 18:52:17] 2026-03-31 22:51:41,024 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 18:52:17] 2026-03-31 22:51:41,071 | INFO     | [data] copytool_in thread has finished
[2026-03-31 18:52:17] 2026-03-31 22:51:41,178 | INFO     | [job] control thread has finished
[2026-03-31 18:52:17] 2026-03-31 22:51:41,209 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 18:52:17] 2026-03-31 22:51:41,308 | INFO     | [data] control thread has finished
[2026-03-31 18:52:17] 2026-03-31 22:51:41,460 | INFO     | [data] copytool_out thread has finished
[2026-03-31 18:52:17] 2026-03-31 22:51:41,609 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 18:52:17] 2026-03-31 22:51:41,630 | INFO     | [payload] failed_post thread has finished
[2026-03-31 18:52:17] 2026-03-31 22:51:42,229 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 18:52:17] 2026-03-31 22:51:43,234 | INFO     | [job] queue monitor thread has finished
[2026-03-31 18:52:17] 2026-03-31 22:51:45,616 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 18:52:17] 2026-03-31 22:52:10,514 | INFO     | PID=3696410 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-31 18:52:17] 2026-03-31 22:52:10,514 | INFO     | .. there are 19 such processes running
[2026-03-31 18:52:17] 2026-03-31 22:52:10,514 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 18:52:17] 2026-03-31 22:52:10,514 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 18:52:17] 2026-03-31 22:52:10,514 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 18:52:17] 2026-03-31 22:52:10,993 | INFO     | [monitor] cgroup control has ended
[2026-03-31 18:52:17] 2026-03-31 22:52:11,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140563683546944)>', '<ExcThread(monitor, started 140563022059264)>']
[2026-03-31 18:52:17] 2026-03-31 22:52:12,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 18:52:17] 2026-03-31 22:52:12,524 | INFO     | [monitor] control thread has ended
[2026-03-31 18:52:17] 2026-03-31 22:52:17,023 | INFO     | all workflow threads have been joined
[2026-03-31 18:52:17] 2026-03-31 22:52:17,023 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 18:52:17] 2026-03-31 22:52:17,023 | INFO     | traces error code: 0
[2026-03-31 18:52:17] 2026-03-31 22:52:17,024 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 18:52:17] 2026-03-31 22:52:17,129 [wrapper] ==== pilot stdout END ====
[2026-03-31 18:52:17] 2026-03-31 22:52:17,132 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 18:52:17] 2026-03-31 22:52:17,134 [wrapper] pilotpid: 3696410
[2026-03-31 18:52:17] 2026-03-31 22:52:17,136 [wrapper] Pilot exit status: 0
[2026-03-31 18:52:17] 2026-03-31 22:52:17,145 [wrapper] pandaids: 7063239633
[2026-03-31 18:52:17] 2026-03-31 22:52:17,248 [wrapper] cleanup supervisor_pilot  574992 3696411
[2026-03-31 18:52:17] 2026-03-31 22:52:17,250 [wrapper] Test setup, not cleaning
[2026-03-31 18:52:17] 2026-03-31 22:52:17,252 [wrapper] apfmon messages muted
[2026-03-31 18:52:17] 2026-03-31 22:52:17,254 [wrapper] ==== wrapper stdout END ====
[2026-03-31 18:52:17] 2026-03-31 22:52:17,255 [wrapper] ==== wrapper stderr END ====
[2026-03-31 18:52:17]  *** Error codes and diagnostics ***
[2026-03-31 18:52:17]     "exeErrorCode": 0,
[2026-03-31 18:52:17]     "exeErrorDiag": "",
[2026-03-31 18:52:17]     "pilotErrorCode": 0,
[2026-03-31 18:52:17]     "pilotErrorDiag": "",
[2026-03-31 18:52:17]  *** Listing of results directory ***
[2026-03-31 18:52:17] total 456084
[2026-03-31 18:52:17] -rw-r--r--. 1 boincer umatlas      5111 Mar 23 09:53 queuedata.json
[2026-03-31 18:52:17] -rw-r--r--. 1 boincer umatlas    585013 Mar 23 09:53 pilot3.tar.gz
[2026-03-31 18:52:17] -rwx------. 1 boincer umatlas     36322 Mar 23 09:53 runpilot2-wrapper.sh
[2026-03-31 18:52:17] -rw-r--r--. 1 boincer umatlas       100 Mar 31 17:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 18:52:17] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 31 17:24 run_atlas
[2026-03-31 18:52:17] -rw-r--r--. 1 boincer umatlas       105 Mar 31 17:24 job.xml
[2026-03-31 18:52:17] -rw-r--r--. 2 boincer umatlas 251196758 Mar 31 17:24 EVNT.49128131._000001.pool.root.1
[2026-03-31 18:52:17] -rw-r--r--. 2 boincer umatlas     15845 Mar 31 17:24 start_atlas.sh
[2026-03-31 18:52:17] drwxrwx--x. 2 boincer umatlas      4096 Mar 31 17:24 shared
[2026-03-31 18:52:17] -rw-r--r--. 2 boincer umatlas    597536 Mar 31 17:24 input.tar.gz
[2026-03-31 18:52:17] -rw-r--r--. 1 boincer umatlas         0 Mar 31 17:24 boinc_lockfile
[2026-03-31 18:52:17] -rw-r--r--. 1 boincer umatlas      2572 Mar 31 17:24 pandaJob.out
[2026-03-31 18:52:17] -rw-------. 1 boincer umatlas        57 Mar 31 17:24 setup.sh.local
[2026-03-31 18:52:17] -rw-------. 1 boincer umatlas   1005014 Mar 31 17:24 agis_schedconf.cvmfs.json
[2026-03-31 18:52:17] -rw-------. 1 boincer umatlas   1511579 Mar 31 17:24 agis_ddmendpoints.agis.ALL.json
[2026-03-31 18:52:17] -rw-------. 1 boincer umatlas       427 Mar 31 17:25 workernode_map.json
[2026-03-31 18:52:17] drwx------. 5 boincer umatlas      4096 Mar 31 17:25 pilot3
[2026-03-31 18:52:17] -rw-r--r--. 1 boincer umatlas      7173 Mar 31 18:46 init_data.xml
[2026-03-31 18:52:17] -rw-------. 1 boincer umatlas 209713447 Mar 31 18:51 HITS.49272304._000074.pool.root.1
[2026-03-31 18:52:17] -rw-r--r--. 1 boincer umatlas       529 Mar 31 18:51 boinc_task_state.xml
[2026-03-31 18:52:17] -rw-------. 1 boincer umatlas      1034 Mar 31 18:51 memory_monitor_summary.json
[2026-03-31 18:52:17] -rw-------. 1 boincer umatlas    371079 Mar 31 18:51 log.49272304._000074.job.log.tgz.1
[2026-03-31 18:52:17] -rw-------. 1 boincer umatlas        95 Mar 31 18:51 pilot_heartbeat.json
[2026-03-31 18:52:17] -rw-------. 1 boincer umatlas      6317 Mar 31 18:51 heartbeat.json
[2026-03-31 18:52:17] -rw-r--r--. 1 boincer umatlas      8192 Mar 31 18:52 boinc_mmap_file
[2026-03-31 18:52:17] -rw-r--r--. 1 boincer umatlas        27 Mar 31 18:52 wrapper_checkpoint.txt
[2026-03-31 18:52:17] -rw-------. 1 boincer umatlas      5079 Mar 31 18:52 pilotlog.txt
[2026-03-31 18:52:17] -rw-------. 1 boincer umatlas    717715 Mar 31 18:52 log.49272304._000074.job.log.1
[2026-03-31 18:52:17] -rw-------. 1 boincer umatlas       357 Mar 31 18:52 output.list
[2026-03-31 18:52:17] -rw-r--r--. 1 boincer umatlas       620 Mar 31 18:52 runtime_log
[2026-03-31 18:52:17] -rw-------. 1 boincer umatlas   1105920 Mar 31 18:52 result.tar.gz
[2026-03-31 18:52:17] -rw-r--r--. 1 boincer umatlas      9338 Mar 31 18:52 runtime_log.err
[2026-03-31 18:52:17] -rw-------. 1 boincer umatlas       652 Mar 31 18:52 IYkKDmetuO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmXSAMDmxVCy9m.diag
[2026-03-31 18:52:17] -rw-r--r--. 1 boincer umatlas     21403 Mar 31 18:52 stderr.txt
[2026-03-31 18:52:17] HITS file was successfully produced:
[2026-03-31 18:52:17] -rw-------. 1 boincer umatlas 209713447 Mar 31 18:51 shared/HITS.pool.root.1
[2026-03-31 18:52:17]  *** Contents of shared directory: ***
[2026-03-31 18:52:17] total 451800
[2026-03-31 18:52:17] -rw-r--r--. 2 boincer umatlas 251196758 Mar 31 17:24 ATLAS.root_0
[2026-03-31 18:52:17] -rw-r--r--. 2 boincer umatlas     15845 Mar 31 17:24 start_atlas.sh
[2026-03-31 18:52:17] -rw-r--r--. 2 boincer umatlas    597536 Mar 31 17:24 input.tar.gz
[2026-03-31 18:52:17] -rw-------. 1 boincer umatlas 209713447 Mar 31 18:51 HITS.pool.root.1
[2026-03-31 18:52:17] -rw-------. 1 boincer umatlas   1105920 Mar 31 18:52 result.tar.gz
18:52:18 (3689128): run_atlas exited; CPU time 33335.904215
18:52:18 (3689128): called boinc_finish(0)

</stderr_txt>
]]>

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