Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:26:42 (24696): wrapper (7.7.26015): starting
16:26:42 (24696): wrapper: running run_atlas (--nthreads 8)
[2026-03-31 16:26:42] Arguments: --nthreads 8
[2026-03-31 16:26:42] Threads: 8
[2026-03-31 16:26:42] Checking for CVMFS
[2026-03-31 16:26:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 16:26:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 16:26:42] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 16:26:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 16:26:42] 2.11.0.0 4268 245614 90524 157914 3 188 2209870 4096001 0 130560 2 35969025 99.705 18002347 442 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-31 16:26:42] CVMFS is ok
[2026-03-31 16:26:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 16:26:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 16:26:42] Further information can be found at the LHC@home message board.
[2026-03-31 16:26:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 16:26:42] Checking for apptainer binary...
[2026-03-31 16:26:42] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-31 16:26:42] apptainer is not installed, using version from CVMFS
[2026-03-31 16:26:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 16:26:42] WARNING: Environment variable TMPDIR already has value [/tmp/job_11442879/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node267
[2026-03-31 16:26:42] apptainer works
[2026-03-31 16:26:42] Set ATHENA_PROC_NUMBER=8
[2026-03-31 16:26:42] Set ATHENA_CORE_NUMBER=8
[2026-03-31 16:26:42] Starting ATLAS job with PandaID=7073094908
[2026-03-31 16:26:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11442879/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 17:16:59]  *** The last 200 lines of the pilot log: ***
[2026-03-31 17:16:59]  filetype=log
[2026-03-31 17:16:59]  guid=bbeb3a99-25c6-4692-871b-7727e887371f
[2026-03-31 17:16:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-31 17:16:59]  is_altstaged=None
[2026-03-31 17:16:59]  is_tar=False
[2026-03-31 17:16:59]  lfn=log.49263208._014369.job.log.tgz.1
[2026-03-31 17:16:59]  mtime=0
[2026-03-31 17:16:59]  protocol_id=None
[2026-03-31 17:16:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-31 17:16:59]  replicas=None
[2026-03-31 17:16:59]  scope=mc23_13p6TeV
[2026-03-31 17:16:59]  status=None
[2026-03-31 17:16:59]  status_code=0
[2026-03-31 17:16:59]  storage_token=
[2026-03-31 17:16:59]  surl=/tmp/job_11442879/atlas/pilot/slots/0/PanDA_Pilot-7073094908/log.49263208._014369.job.log.tgz.1
[2026-03-31 17:16:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/92/log.49263208._014369.job.log.tgz.1
[2026-03-31 17:16:59]  workdir=None
[2026-03-31 17:16:59] ]
[2026-03-31 17:16:59] 2026-03-31 15:16:34,395 | INFO     | transferring file log.49263208._014369.job.log.tgz.1 from /tmp/job_11442879/atlas/pilot/slots/0/PanDA_Pilot-7073094908/log.49263208._014369.job.log.tgz.1 to /tmp/j
[2026-03-31 17:16:59] 2026-03-31 15:16:34,395 | INFO     | executing command: /usr/bin/env mv /tmp/job_11442879/atlas/pilot/slots/0/PanDA_Pilot-7073094908/log.49263208._014369.job.log.tgz.1 /tmp/job_11442879/atlas/pilot/sl
[2026-03-31 17:16:59] 2026-03-31 15:16:34,402 | INFO     | adding to output.list: log.49263208._014369.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/92/log.49263208._014369.job.log.tg
[2026-03-31 17:16:59] 2026-03-31 15:16:34,402 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-31 17:16:59] 2026-03-31 15:16:34,402 | INFO     | summary of transferred files:
[2026-03-31 17:16:59] 2026-03-31 15:16:34,402 | INFO     |  -- lfn=log.49263208._014369.job.log.tgz.1, status_code=0, status=transferred
[2026-03-31 17:16:59] 2026-03-31 15:16:34,402 | INFO     | stage-out finished correctly
[2026-03-31 17:16:59] 2026-03-31 15:16:36,865 | WARNING  | process 923 can no longer be monitored (due to stat problems) - aborting
[2026-03-31 17:16:59] 2026-03-31 15:16:36,865 | INFO     | using path: /tmp/job_11442879/atlas/pilot/slots/0/PanDA_Pilot-7073094908/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 17:16:59] 2026-03-31 15:16:36,952 | INFO     | number of running child processes to parent process 923: 1
[2026-03-31 17:16:59] 2026-03-31 15:16:36,952 | INFO     | maximum number of monitored processes: 6
[2026-03-31 17:16:59] 2026-03-31 15:16:37,098 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-31 17:16:59] 2026-03-31 15:16:39,455 | INFO     | monitor loop #230: job 0:7073094908 is in state 'finished'
[2026-03-31 17:16:59] 2026-03-31 15:16:39,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-31 17:16:59] 2026-03-31 15:16:39,882 | INFO     | job 7073094908 has state=finished
[2026-03-31 17:16:59] 2026-03-31 15:16:39,882 | INFO     | preparing for final server update for job 7073094908 in state='finished'
[2026-03-31 17:16:59] 2026-03-31 15:16:40,464 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-31 17:16:59] 2026-03-31 15:16:40,464 | INFO     | reading metadata from: /tmp/job_11442879/atlas/pilot/slots/0/PanDA_Pilot-7073094908/jobReport.json
[2026-03-31 17:16:59] 2026-03-31 15:16:40,465 | INFO     | added worker_node to metadata from /tmp/job_11442879/atlas/pilot/slots/0/workernode_map.json
[2026-03-31 17:16:59] 2026-03-31 15:16:40,465 | INFO     | this job has now completed (state=finished)
[2026-03-31 17:16:59] 2026-03-31 15:16:40,465 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 17:16:59] 2026-03-31 15:16:40,465 | INFO     | log transfer has been attempted: DONE
[2026-03-31 17:16:59] 2026-03-31 15:16:40,465 | INFO     | job 7073094908 has finished - writing final server update
[2026-03-31 17:16:59] 2026-03-31 15:16:40,466 | INFO     | total number of processed events: 400 (read)
[2026-03-31 17:16:59] 2026-03-31 15:16:40,484 | INFO     | using path: /tmp/job_11442879/atlas/pilot/slots/0/PanDA_Pilot-7073094908/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 17:16:59] 2026-03-31 15:16:40,484 | INFO     | extracted standard info from prmon json
[2026-03-31 17:16:59] 2026-03-31 15:16:40,484 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 17:16:59] 2026-03-31 15:16:40,484 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 17:16:59] 2026-03-31 15:16:40,484 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 17:16:59] 2026-03-31 15:16:40,485 | INFO     | fitting pss+swap vs Time
[2026-03-31 17:16:59] 2026-03-31 15:16:40,485 | INFO     | sum of square deviations: 22960430.5
[2026-03-31 17:16:59] 2026-03-31 15:16:40,485 | INFO     | sum of deviations: 132852144.0
[2026-03-31 17:16:59] 2026-03-31 15:16:40,485 | INFO     | mean x (centered): 0.0
[2026-03-31 17:16:59] 2026-03-31 15:16:40,485 | INFO     | mean y: 2994828.904761905
[2026-03-31 17:16:59] 2026-03-31 15:16:40,485 | INFO     | intersect: 2994828.904761905
[2026-03-31 17:16:59] 2026-03-31 15:16:40,485 | INFO     | chi2: 0.0003112729155045657
[2026-03-31 17:16:59] 2026-03-31 15:16:40,485 | INFO     | current memory leak: 5.79 B/s (using 42 data points, chi2=0.00)
[2026-03-31 17:16:59] 2026-03-31 15:16:40,485 | INFO     | could have reported an average CPU frequency of 2754 MHz (5 samples)
[2026-03-31 17:16:59] 2026-03-31 15:16:40,485 | INFO     | ..............................
[2026-03-31 17:16:59] 2026-03-31 15:16:40,485 | INFO     | . Timing measurements:
[2026-03-31 17:16:59] 2026-03-31 15:16:40,485 | INFO     | . get job = 0 s
[2026-03-31 17:16:59] 2026-03-31 15:16:40,485 | INFO     | . initial setup = 2 s
[2026-03-31 17:16:59] 2026-03-31 15:16:40,485 | INFO     | . payload setup = 3 s
[2026-03-31 17:16:59] 2026-03-31 15:16:40,485 | INFO     | . stage-in = 0 s
[2026-03-31 17:16:59] 2026-03-31 15:16:40,486 | INFO     | . payload execution = 2966 s
[2026-03-31 17:16:59] 2026-03-31 15:16:40,486 | INFO     | . stage-out = 0 s
[2026-03-31 17:16:59] 2026-03-31 15:16:40,486 | INFO     | . log creation = 0 s
[2026-03-31 17:16:59] 2026-03-31 15:16:40,486 | INFO     | ..............................
[2026-03-31 17:16:59] 2026-03-31 15:16:40,533 | INFO     | 
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | job summary report
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | --------------------------------------------------
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | PanDA job id: 7073094908
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | task id: 49263208
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | errors: (none)
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | pilot state: finished 
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | transexitcode: 0
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | exeerrorcode: 0
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | exeerrordiag: 
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | exitcode: 0
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | exitmsg: OK
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | cpuconsumptiontime: 19410 s
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | nevents: 400
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | neventsw: 0
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | pid: 923
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | pgrp: 923
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | corecount: 8
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | event service: False
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | sizes: {0: 2281717, 11: 2281717, 2973: 2307240, 2974: 2316268, 2977: 2316324, 2980: 2316550}
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | --------------------------------------------------
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | 
[2026-03-31 17:16:59] 2026-03-31 15:16:40,534 | INFO     | executing command: ls -lF /tmp/job_11442879/atlas/pilot/slots/0
[2026-03-31 17:16:59] 2026-03-31 15:16:40,543 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,543 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,543 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,543 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,543 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,543 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,543 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,543 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,543 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,544 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 17:16:59] 2026-03-31 15:16:40,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,544 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 17:16:59] 2026-03-31 15:16:40,544 | INFO     | job 7073094908 has completed (purged errors)
[2026-03-31 17:16:59] 2026-03-31 15:16:40,544 | INFO     | overall cleanup function is called
[2026-03-31 17:16:59] 2026-03-31 15:16:41,550 | INFO     | --- collectZombieJob: --- 10, [923]
[2026-03-31 17:16:59] 2026-03-31 15:16:41,550 | INFO     | zombie collector waiting for pid 923
[2026-03-31 17:16:59] 2026-03-31 15:16:41,550 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 17:16:59] 2026-03-31 15:16:41,550 | INFO     | collected zombie processes
[2026-03-31 17:16:59] 2026-03-31 15:16:41,550 | INFO     | will attempt to kill all subprocesses of pid=923
[2026-03-31 17:16:59] 2026-03-31 15:16:41,642 | INFO     | process IDs to be killed: [923] (in reverse order)
[2026-03-31 17:16:59] 2026-03-31 15:16:41,672 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 17:16:59] 2026-03-31 15:16:41,672 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 17:16:59] 2026-03-31 15:16:41,675 | INFO     | did not find any defunct processes belonging to 923
[2026-03-31 17:16:59] 2026-03-31 15:16:41,678 | INFO     | did not find any defunct processes belonging to 923
[2026-03-31 17:16:59] 2026-03-31 15:16:41,678 | INFO     | Ready for new job
[2026-03-31 17:16:59] 2026-03-31 15:16:41,679 | INFO     | **************************************
[2026-03-31 17:16:59] 2026-03-31 15:16:41,679 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 17:16:59] 2026-03-31 15:16:41,679 | INFO     | **************************************
[2026-03-31 17:16:59] 2026-03-31 15:16:41,679 | INFO     | 
[2026-03-31 17:16:59] 2026-03-31 15:16:41,693 | INFO     | architecture information:
[2026-03-31 17:16:59] 2026-03-31 15:16:41,693 | INFO     | executing command: cat /etc/os-release
[2026-03-31 17:16:59] 2026-03-31 15:16:41,700 | INFO     | cat /etc/os-release:
[2026-03-31 17:16:59] NAME="CentOS Linux"
[2026-03-31 17:16:59] VERSION="7 (Core)"
[2026-03-31 17:16:59] ID="centos"
[2026-03-31 17:16:59] ID_LIKE="rhel fedora"
[2026-03-31 17:16:59] VERSION_ID="7"
[2026-03-31 17:16:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 17:16:59] ANSI_COLOR="0;31"
[2026-03-31 17:16:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 17:16:59] HOME_URL="https://www.centos.org/"
[2026-03-31 17:16:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 17:16:59] 
[2026-03-31 17:16:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 17:16:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 17:16:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 17:16:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 17:16:59] 
[2026-03-31 17:16:59] 2026-03-31 15:16:41,700 | INFO     | **************************************
[2026-03-31 17:16:59] 2026-03-31 15:16:42,202 | INFO     | executing command: df -mP /tmp/job_11442879/atlas/pilot/slots/0
[2026-03-31 17:16:59] 2026-03-31 15:16:42,207 | INFO     | sufficient remaining disk space (228584325120 B)
[2026-03-31 17:16:59] 2026-03-31 15:16:42,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 17:16:59] 2026-03-31 15:16:42,207 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 17:16:59] 2026-03-31 15:16:42,207 | INFO     | update_server=False
[2026-03-31 17:16:59] 2026-03-31 15:16:42,207 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 17:16:59] 2026-03-31 15:16:42,208 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-31 17:16:59] 2026-03-31 15:16:42,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 17:16:59] 2026-03-31 15:16:42,208 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 17:16:59] 2026-03-31 15:16:42,208 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 17:16:59] 2026-03-31 15:16:42,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 17:16:59] 2026-03-31 15:16:42,460 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 17:16:59] 2026-03-31 15:16:42,772 | INFO     | all payload control threads have been joined
[2026-03-31 17:16:59] 2026-03-31 15:16:42,920 | INFO     | all job control threads have been joined
[2026-03-31 17:16:59] 2026-03-31 15:16:42,923 | INFO     | all data control threads have been joined
[2026-03-31 17:16:59] 2026-03-31 15:16:42,962 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 17:16:59] 2026-03-31 15:16:42,962 | INFO     | aborting loop
[2026-03-31 17:16:59] 2026-03-31 15:16:43,151 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 17:16:59] 2026-03-31 15:16:43,213 | INFO     | [job] retrieve thread has finished
[2026-03-31 17:16:59] 2026-03-31 15:16:43,213 | INFO     | [job] queue monitor thread has finished
[2026-03-31 17:16:59] 2026-03-31 15:16:43,252 | INFO     | [payload] failed_post thread has finished
[2026-03-31 17:16:59] 2026-03-31 15:16:43,777 | INFO     | [payload] control thread has finished
[2026-03-31 17:16:59] 2026-03-31 15:16:43,842 | INFO     | [payload] validate_post thread has finished
[2026-03-31 17:16:59] 2026-03-31 15:16:43,926 | INFO     | [job] control thread has finished
[2026-03-31 17:16:59] 2026-03-31 15:16:43,928 | INFO     | [data] control thread has finished
[2026-03-31 17:16:59] 2026-03-31 15:16:43,967 | INFO     | [job] job monitor thread has finished
[2026-03-31 17:16:59] 2026-03-31 15:16:44,128 | INFO     | [data] copytool_in thread has finished
[2026-03-31 17:16:59] 2026-03-31 15:16:44,205 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 17:16:59] 2026-03-31 15:16:44,330 | INFO     | [job] validate thread has finished
[2026-03-31 17:16:59] 2026-03-31 15:16:44,385 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 17:16:59] 2026-03-31 15:16:44,465 | INFO     | [data] copytool_out thread has finished
[2026-03-31 17:16:59] 2026-03-31 15:16:44,698 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 17:16:59] 2026-03-31 15:16:47,156 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 17:16:59] 2026-03-31 15:16:52,334 | INFO     | job.realtimelogging is not enabled
[2026-03-31 17:16:59] 2026-03-31 15:16:53,339 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 17:16:59] 2026-03-31 15:16:53,565 | INFO     | [monitor] cgroup control has ended
[2026-03-31 17:16:59] 2026-03-31 15:16:54,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-31 17:16:59] 2026-03-31 15:16:55,272 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 17:16:59] 2026-03-31 15:16:55,272 | INFO     | [monitor] control thread has ended
[2026-03-31 17:16:59] 2026-03-31 15:16:59,308 | INFO     | all workflow threads have been joined
[2026-03-31 17:16:59] 2026-03-31 15:16:59,308 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 17:16:59] 2026-03-31 15:16:59,308 | INFO     | traces error code: 0
[2026-03-31 17:16:59] 2026-03-31 15:16:59,309 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 17:16:59] 2026-03-31 15:16:59,365 [wrapper] ==== pilot stdout END ====
[2026-03-31 17:16:59] 2026-03-31 15:16:59,366 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 17:16:59] 2026-03-31 15:16:59,366 [wrapper] pilotpid: 28542
[2026-03-31 17:16:59] 2026-03-31 15:16:59,367 [wrapper] Pilot exit status: 0
[2026-03-31 17:16:59] 2026-03-31 15:16:59,372 [wrapper] pandaids: 7073094908
[2026-03-31 17:16:59] 2026-03-31 15:16:59,391 [wrapper] cleanup supervisor_pilot 15303 28550
[2026-03-31 17:16:59] 2026-03-31 15:16:59,392 [wrapper] Test setup, not cleaning
[2026-03-31 17:16:59] 2026-03-31 15:16:59,393 [wrapper] apfmon messages muted
[2026-03-31 17:16:59] 2026-03-31 15:16:59,394 [wrapper] ==== wrapper stdout END ====
[2026-03-31 17:16:59] 2026-03-31 15:16:59,395 [wrapper] ==== wrapper stderr END ====
[2026-03-31 17:16:59]  *** Error codes and diagnostics ***
[2026-03-31 17:16:59]     "exeErrorCode": 0,
[2026-03-31 17:16:59]     "pilotErrorCode": 0,
[2026-03-31 17:16:59]  *** Listing of results directory ***
[2026-03-31 17:16:59] total 410208
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user    644034 Mar 31 10:26 pilot3.tar.gz
[2026-03-31 17:16:59] -rwx------ 1 mf493845 unix-user     36322 Mar 31 10:28 runpilot2-wrapper.sh
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user      5118 Mar 31 10:28 queuedata.json
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user       100 Mar 31 15:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 17:16:59] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 31 15:29 run_atlas
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user       105 Mar 31 15:29 job.xml
[2026-03-31 17:16:59] -rw-r--r-- 2 mf493845 unix-user 224766851 Mar 31 16:26 EVNT.49263206._000624.pool.root.1
[2026-03-31 17:16:59] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 31 16:26 start_atlas.sh
[2026-03-31 17:16:59] drwxrwx--x 2 mf493845 unix-user       100 Mar 31 16:26 shared
[2026-03-31 17:16:59] -rw-r--r-- 2 mf493845 unix-user    656759 Mar 31 16:26 input.tar.gz
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user      6390 Mar 31 16:26 init_data.xml
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user         0 Mar 31 16:26 boinc_setup_complete
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user      8192 Mar 31 16:26 boinc_mmap_file
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user         0 Mar 31 16:26 boinc_lockfile
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user      2575 Mar 31 16:26 pandaJob.out
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user   1003225 Mar 31 16:26 agis_schedconf.cvmfs.json
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user   1511579 Mar 31 16:26 agis_ddmendpoints.agis.ALL.json
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user       420 Mar 31 16:26 workernode_map.json
[2026-03-31 17:16:59] drwx------ 5 mf493845 unix-user       480 Mar 31 16:26 pilot3
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user 190019294 Mar 31 17:16 HITS.49263208._014369.pool.root.1
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user        95 Mar 31 17:16 pilot_heartbeat.json
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user      1007 Mar 31 17:16 memory_monitor_summary.json
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user    293265 Mar 31 17:16 log.49263208._014369.job.log.tgz.1
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user      6316 Mar 31 17:16 heartbeat_new.json
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user      6206 Mar 31 17:16 heartbeat.json
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user      4633 Mar 31 17:16 pilotlog.txt
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user    321193 Mar 31 17:16 log.49263208._014369.job.log.1
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user       357 Mar 31 17:16 output.list
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user       620 Mar 31 17:16 runtime_log
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user    634880 Mar 31 17:16 result.tar.gz
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user       637 Mar 31 17:16 UCCMDmMdjR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmSTSKDm8P2ONm.diag
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user      9219 Mar 31 17:16 runtime_log.err
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user     21669 Mar 31 17:16 stderr.txt
[2026-03-31 17:16:59] HITS file was successfully produced:
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user 190019294 Mar 31 17:16 shared/HITS.pool.root.1
[2026-03-31 17:16:59]  *** Contents of shared directory: ***
[2026-03-31 17:16:59] total 406348
[2026-03-31 17:16:59] -rw-r--r-- 2 mf493845 unix-user 224766851 Mar 31 16:26 ATLAS.root_0
[2026-03-31 17:16:59] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 31 16:26 start_atlas.sh
[2026-03-31 17:16:59] -rw-r--r-- 2 mf493845 unix-user    656759 Mar 31 16:26 input.tar.gz
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user 190019294 Mar 31 17:16 HITS.pool.root.1
[2026-03-31 17:16:59] -rw------- 1 mf493845 unix-user    634880 Mar 31 17:16 result.tar.gz
17:17:01 (24696): run_atlas exited; CPU time 19444.267305
17:17:01 (24696): called boinc_finish(0)

</stderr_txt>
]]>

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