Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:24:16 (27997): wrapper (7.7.26015): starting
13:24:16 (27997): wrapper: running run_atlas (--nthreads 8)
[2026-03-31 13:24:16] Arguments: --nthreads 8
[2026-03-31 13:24:16] Threads: 8
[2026-03-31 13:24:16] Checking for CVMFS
[2026-03-31 13:24:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 13:24:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 13:24:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 13:24:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 13:24:16] 2.11.0.0 4127 168607 66592 157914 1 188 2545284 4096001 5502 130560 2 7464879 99.597 7631528 318 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-31 13:24:16] CVMFS is ok
[2026-03-31 13:24:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 13:24:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 13:24:16] Further information can be found at the LHC@home message board.
[2026-03-31 13:24:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 13:24:16] Checking for apptainer binary...
[2026-03-31 13:24:16] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-31 13:24:16] apptainer is not installed, using version from CVMFS
[2026-03-31 13:24:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 13:24:16] WARNING: Environment variable TMPDIR already has value [/tmp/job_11441081/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node403
[2026-03-31 13:24:16] apptainer works
[2026-03-31 13:24:16] Set ATHENA_PROC_NUMBER=8
[2026-03-31 13:24:16] Set ATHENA_CORE_NUMBER=8
[2026-03-31 13:24:16] Starting ATLAS job with PandaID=7074313729
[2026-03-31 13:24:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11441081/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 14:13:34]  *** The last 200 lines of the pilot log: ***
[2026-03-31 14:13:34]  domain=
[2026-03-31 14:13:34]  filesize=295158
[2026-03-31 14:13:34]  filetype=log
[2026-03-31 14:13:34]  guid=8ccef9ad-8b84-430c-b43d-0d9098c1bddd
[2026-03-31 14:13:34]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-31 14:13:34]  is_altstaged=None
[2026-03-31 14:13:34]  is_tar=False
[2026-03-31 14:13:34]  lfn=log.49499762._000046.job.log.tgz.1
[2026-03-31 14:13:34]  mtime=0
[2026-03-31 14:13:34]  protocol_id=None
[2026-03-31 14:13:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-31 14:13:34]  replicas=None
[2026-03-31 14:13:34]  scope=mc23_13p6TeV
[2026-03-31 14:13:34]  status=None
[2026-03-31 14:13:34]  status_code=0
[2026-03-31 14:13:34]  storage_token=
[2026-03-31 14:13:34]  surl=/tmp/job_11441081/atlas/pilot/slots/0/PanDA_Pilot-7074313729/log.49499762._000046.job.log.tgz.1
[2026-03-31 14:13:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/4d/log.49499762._000046.job.log.tgz.1
[2026-03-31 14:13:34]  workdir=None
[2026-03-31 14:13:34] ]
[2026-03-31 14:13:34] 2026-03-31 12:12:41,494 | INFO     | transferring file log.49499762._000046.job.log.tgz.1 from /tmp/job_11441081/atlas/pilot/slots/0/PanDA_Pilot-7074313729/log.49499762._000046.job.log.tgz.1 to /tmp/j
[2026-03-31 14:13:34] 2026-03-31 12:12:41,494 | INFO     | executing command: /usr/bin/env mv /tmp/job_11441081/atlas/pilot/slots/0/PanDA_Pilot-7074313729/log.49499762._000046.job.log.tgz.1 /tmp/job_11441081/atlas/pilot/sl
[2026-03-31 14:13:34] 2026-03-31 12:12:41,501 | INFO     | adding to output.list: log.49499762._000046.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/4d/log.49499762._000046.job.log.tg
[2026-03-31 14:13:34] 2026-03-31 12:12:41,502 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-31 14:13:34] 2026-03-31 12:12:41,502 | INFO     | summary of transferred files:
[2026-03-31 14:13:34] 2026-03-31 12:12:41,502 | INFO     |  -- lfn=log.49499762._000046.job.log.tgz.1, status_code=0, status=transferred
[2026-03-31 14:13:34] 2026-03-31 12:12:41,502 | INFO     | stage-out finished correctly
[2026-03-31 14:13:34] 2026-03-31 12:12:41,520 | INFO     | monitor loop #220: job 0:7074313729 is in state 'finished'
[2026-03-31 14:13:34] 2026-03-31 12:12:41,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-31 14:13:34] 2026-03-31 12:12:43,111 | INFO     | PID=414 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-03-31 14:13:34] 2026-03-31 12:12:44,028 | INFO     | monitor loop #221: job 0:7074313729 is in state 'finished'
[2026-03-31 14:13:34] 2026-03-31 12:12:44,028 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-31 14:13:34] 2026-03-31 12:12:44,114 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-31 14:13:34] 2026-03-31 12:12:44,887 | INFO     | job 7074313729 has state=finished
[2026-03-31 14:13:34] 2026-03-31 12:12:44,887 | INFO     | preparing for final server update for job 7074313729 in state='finished'
[2026-03-31 14:13:34] 2026-03-31 12:12:44,888 | INFO     | reading metadata from: /tmp/job_11441081/atlas/pilot/slots/0/PanDA_Pilot-7074313729/jobReport.json
[2026-03-31 14:13:34] 2026-03-31 12:12:44,889 | INFO     | added worker_node to metadata from /tmp/job_11441081/atlas/pilot/slots/0/workernode_map.json
[2026-03-31 14:13:34] 2026-03-31 12:12:44,889 | INFO     | this job has now completed (state=finished)
[2026-03-31 14:13:34] 2026-03-31 12:12:44,889 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 14:13:34] 2026-03-31 12:12:44,889 | INFO     | log transfer has been attempted: DONE
[2026-03-31 14:13:34] 2026-03-31 12:12:44,889 | INFO     | job 7074313729 has finished - writing final server update
[2026-03-31 14:13:34] 2026-03-31 12:12:44,889 | INFO     | total number of processed events: 400 (read)
[2026-03-31 14:13:34] 2026-03-31 12:12:44,906 | INFO     | using path: /tmp/job_11441081/atlas/pilot/slots/0/PanDA_Pilot-7074313729/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 14:13:34] 2026-03-31 12:12:44,906 | INFO     | extracted standard info from prmon json
[2026-03-31 14:13:34] 2026-03-31 12:12:44,906 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 14:13:34] 2026-03-31 12:12:44,906 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 14:13:34] 2026-03-31 12:12:44,906 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 14:13:34] 2026-03-31 12:12:44,907 | INFO     | fitting pss+swap vs Time
[2026-03-31 14:13:34] 2026-03-31 12:12:44,907 | INFO     | sum of square deviations: 21358540.0
[2026-03-31 14:13:34] 2026-03-31 12:12:44,907 | INFO     | sum of deviations: 3424375178.0000005
[2026-03-31 14:13:34] 2026-03-31 12:12:44,907 | INFO     | mean x (centered): 0.0
[2026-03-31 14:13:34] 2026-03-31 12:12:44,907 | INFO     | mean y: 2671705.536585366
[2026-03-31 14:13:34] 2026-03-31 12:12:44,907 | INFO     | intersect: 2671705.536585366
[2026-03-31 14:13:34] 2026-03-31 12:12:44,907 | INFO     | chi2: 0.023152153204491044
[2026-03-31 14:13:34] 2026-03-31 12:12:44,908 | INFO     | current memory leak: 160.33 B/s (using 41 data points, chi2=0.02)
[2026-03-31 14:13:34] 2026-03-31 12:12:44,908 | INFO     | could have reported an average CPU frequency of 3066 MHz (5 samples)
[2026-03-31 14:13:34] 2026-03-31 12:12:44,908 | INFO     | ..............................
[2026-03-31 14:13:34] 2026-03-31 12:12:44,908 | INFO     | . Timing measurements:
[2026-03-31 14:13:34] 2026-03-31 12:12:44,908 | INFO     | . get job = 0 s
[2026-03-31 14:13:34] 2026-03-31 12:12:44,908 | INFO     | . initial setup = 2 s
[2026-03-31 14:13:34] 2026-03-31 12:12:44,908 | INFO     | . payload setup = 3 s
[2026-03-31 14:13:34] 2026-03-31 12:12:44,908 | INFO     | . stage-in = 0 s
[2026-03-31 14:13:34] 2026-03-31 12:12:44,908 | INFO     | . payload execution = 2879 s
[2026-03-31 14:13:34] 2026-03-31 12:12:44,908 | INFO     | . stage-out = 0 s
[2026-03-31 14:13:34] 2026-03-31 12:12:44,908 | INFO     | . log creation = 0 s
[2026-03-31 14:13:34] 2026-03-31 12:12:44,908 | INFO     | ..............................
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | 
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | job summary report
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | --------------------------------------------------
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | PanDA job id: 7074313729
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | task id: 49499762
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | errors: (none)
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | pilot state: finished 
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | transexitcode: 0
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | exeerrorcode: 0
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | exeerrordiag: 
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | exitcode: 0
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | exitmsg: OK
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | cpuconsumptiontime: 20658 s
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | nevents: 400
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | neventsw: 0
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | pid: 13903
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | pgrp: 13903
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | corecount: 8
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | event service: False
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | sizes: {0: 2279751, 1: 2281747, 11: 2281747, 2886: 2307215, 2887: 2316243, 2890: 2316299, 2891: 2316653}
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | --------------------------------------------------
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | 
[2026-03-31 14:13:34] 2026-03-31 12:12:44,957 | INFO     | executing command: ls -lF /tmp/job_11441081/atlas/pilot/slots/0
[2026-03-31 14:13:34] 2026-03-31 12:12:44,967 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,967 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,967 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,967 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,967 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,967 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,967 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,967 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,967 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,967 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,968 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,968 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,968 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,968 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,968 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,968 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,968 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,968 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 14:13:34] 2026-03-31 12:12:44,968 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,968 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 14:13:34] 2026-03-31 12:12:44,968 | INFO     | job 7074313729 has completed (purged errors)
[2026-03-31 14:13:34] 2026-03-31 12:12:44,968 | INFO     | overall cleanup function is called
[2026-03-31 14:13:34] 2026-03-31 12:12:45,974 | INFO     | --- collectZombieJob: --- 10, [13903]
[2026-03-31 14:13:34] 2026-03-31 12:12:45,974 | INFO     | zombie collector waiting for pid 13903
[2026-03-31 14:13:34] 2026-03-31 12:12:45,974 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 14:13:34] 2026-03-31 12:12:45,974 | INFO     | collected zombie processes
[2026-03-31 14:13:34] 2026-03-31 12:12:45,974 | INFO     | will attempt to kill all subprocesses of pid=13903
[2026-03-31 14:13:34] 2026-03-31 12:12:46,060 | INFO     | process IDs to be killed: [13903] (in reverse order)
[2026-03-31 14:13:34] 2026-03-31 12:12:46,089 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 14:13:34] 2026-03-31 12:12:46,089 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 14:13:34] 2026-03-31 12:12:46,094 | INFO     | did not find any defunct processes belonging to 13903
[2026-03-31 14:13:34] 2026-03-31 12:12:46,097 | INFO     | did not find any defunct processes belonging to 13903
[2026-03-31 14:13:34] 2026-03-31 12:12:46,097 | INFO     | Ready for new job
[2026-03-31 14:13:34] 2026-03-31 12:12:46,097 | INFO     | **************************************
[2026-03-31 14:13:34] 2026-03-31 12:12:46,097 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 14:13:34] 2026-03-31 12:12:46,097 | INFO     | **************************************
[2026-03-31 14:13:34] 2026-03-31 12:12:46,098 | INFO     | 
[2026-03-31 14:13:34] 2026-03-31 12:12:46,110 | INFO     | architecture information:
[2026-03-31 14:13:34] 2026-03-31 12:12:46,110 | INFO     | executing command: cat /etc/os-release
[2026-03-31 14:13:34] 2026-03-31 12:12:46,116 | INFO     | cat /etc/os-release:
[2026-03-31 14:13:34] NAME="CentOS Linux"
[2026-03-31 14:13:34] VERSION="7 (Core)"
[2026-03-31 14:13:34] ID="centos"
[2026-03-31 14:13:34] ID_LIKE="rhel fedora"
[2026-03-31 14:13:34] VERSION_ID="7"
[2026-03-31 14:13:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 14:13:34] ANSI_COLOR="0;31"
[2026-03-31 14:13:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 14:13:34] HOME_URL="https://www.centos.org/"
[2026-03-31 14:13:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 14:13:34] 
[2026-03-31 14:13:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 14:13:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 14:13:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 14:13:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 14:13:34] 
[2026-03-31 14:13:34] 2026-03-31 12:12:46,116 | INFO     | **************************************
[2026-03-31 14:13:34] 2026-03-31 12:12:46,619 | INFO     | executing command: df -mP /tmp/job_11441081/atlas/pilot/slots/0
[2026-03-31 14:13:34] 2026-03-31 12:12:46,625 | INFO     | sufficient remaining disk space (228307501056 B)
[2026-03-31 14:13:34] 2026-03-31 12:12:46,625 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 14:13:34] 2026-03-31 12:12:46,625 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 14:13:34] 2026-03-31 12:12:46,625 | INFO     | update_server=False
[2026-03-31 14:13:34] 2026-03-31 12:12:46,625 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 14:13:34] 2026-03-31 12:12:46,625 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 14:13:34] 2026-03-31 12:12:46,626 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 14:13:34] 2026-03-31 12:12:47,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 14:13:34] 2026-03-31 12:12:47,217 | INFO     | all job control threads have been joined
[2026-03-31 14:13:34] 2026-03-31 12:12:47,472 | INFO     | all data control threads have been joined
[2026-03-31 14:13:34] 2026-03-31 12:12:47,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 14:13:34] 2026-03-31 12:12:47,536 | INFO     | aborting loop
[2026-03-31 14:13:34] 2026-03-31 12:12:47,631 | INFO     | [job] retrieve thread has finished
[2026-03-31 14:13:34] 2026-03-31 12:12:47,631 | INFO     | [job] queue monitor thread has finished
[2026-03-31 14:13:34] 2026-03-31 12:12:47,693 | INFO     | all payload control threads have been joined
[2026-03-31 14:13:34] 2026-03-31 12:12:47,762 | INFO     | [payload] validate_post thread has finished
[2026-03-31 14:13:34] 2026-03-31 12:12:48,131 | INFO     | [job] validate thread has finished
[2026-03-31 14:13:34] 2026-03-31 12:12:48,222 | INFO     | [job] control thread has finished
[2026-03-31 14:13:34] 2026-03-31 12:12:48,380 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 14:13:34] 2026-03-31 12:12:48,477 | INFO     | [data] control thread has finished
[2026-03-31 14:13:34] 2026-03-31 12:12:48,541 | INFO     | [job] job monitor thread has finished
[2026-03-31 14:13:34] 2026-03-31 12:12:48,596 | INFO     | [payload] failed_post thread has finished
[2026-03-31 14:13:34] 2026-03-31 12:12:48,636 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 14:13:34] 2026-03-31 12:12:48,661 | INFO     | [data] copytool_in thread has finished
[2026-03-31 14:13:34] 2026-03-31 12:12:48,698 | INFO     | [payload] control thread has finished
[2026-03-31 14:13:34] 2026-03-31 12:12:48,814 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 14:13:34] 2026-03-31 12:12:49,066 | INFO     | [data] copytool_out thread has finished
[2026-03-31 14:13:34] 2026-03-31 12:12:50,631 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 14:13:34] 2026-03-31 12:12:57,561 | INFO     | job.realtimelogging is not enabled
[2026-03-31 14:13:34] 2026-03-31 12:12:58,566 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 14:13:34] 2026-03-31 12:13:17,289 | INFO     | PID=414 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-03-31 14:13:34] 2026-03-31 12:13:17,289 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 14:13:34] 2026-03-31 12:13:17,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 14:13:34] 2026-03-31 12:13:17,289 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 14:13:34] 2026-03-31 12:13:27,994 | INFO     | [monitor] cgroup control has ended
[2026-03-31 14:13:34] 2026-03-31 12:13:29,401 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456067393280)>']
[2026-03-31 14:13:34] 2026-03-31 12:13:30,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 14:13:34] 2026-03-31 12:13:30,355 | INFO     | [monitor] control thread has ended
[2026-03-31 14:13:34] 2026-03-31 12:13:34,426 | INFO     | all workflow threads have been joined
[2026-03-31 14:13:34] 2026-03-31 12:13:34,426 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 14:13:34] 2026-03-31 12:13:34,426 | INFO     | traces error code: 0
[2026-03-31 14:13:34] 2026-03-31 12:13:34,426 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 14:13:34] 2026-03-31 12:13:34,479 [wrapper] ==== pilot stdout END ====
[2026-03-31 14:13:34] 2026-03-31 12:13:34,481 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 14:13:34] 2026-03-31 12:13:34,482 [wrapper] pilotpid: 414
[2026-03-31 14:13:34] 2026-03-31 12:13:34,483 [wrapper] Pilot exit status: 0
[2026-03-31 14:13:34] 2026-03-31 12:13:34,487 [wrapper] pandaids: 7074313729
[2026-03-31 14:13:34] 2026-03-31 12:13:34,508 [wrapper] cleanup supervisor_pilot  8018 415
[2026-03-31 14:13:34] 2026-03-31 12:13:34,510 [wrapper] Test setup, not cleaning
[2026-03-31 14:13:34] 2026-03-31 12:13:34,511 [wrapper] apfmon messages muted
[2026-03-31 14:13:34] 2026-03-31 12:13:34,512 [wrapper] ==== wrapper stdout END ====
[2026-03-31 14:13:34] 2026-03-31 12:13:34,513 [wrapper] ==== wrapper stderr END ====
[2026-03-31 14:13:34]  *** Error codes and diagnostics ***
[2026-03-31 14:13:34]     "exeErrorCode": 0,
[2026-03-31 14:13:34]     "pilotErrorCode": 0,
[2026-03-31 14:13:34]  *** Listing of results directory ***
[2026-03-31 14:13:34] total 435064
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user      5118 Mar 30 17:50 queuedata.json
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user    644034 Mar 30 17:50 pilot3.tar.gz
[2026-03-31 14:13:34] -rwx------ 1 mf493845 unix-user     36322 Mar 30 17:51 runpilot2-wrapper.sh
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user       100 Mar 31 12:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 14:13:34] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 31 12:17 run_atlas
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user       105 Mar 31 12:17 job.xml
[2026-03-31 14:13:34] -rw-r--r-- 2 mf493845 unix-user 260334009 Mar 31 13:24 EVNT.49474669._000002.pool.root.1
[2026-03-31 14:13:34] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 31 13:24 start_atlas.sh
[2026-03-31 14:13:34] drwxrwx--x 2 mf493845 unix-user       100 Mar 31 13:24 shared
[2026-03-31 14:13:34] -rw-r--r-- 2 mf493845 unix-user    656739 Mar 31 13:24 input.tar.gz
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user      6389 Mar 31 13:24 init_data.xml
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user         0 Mar 31 13:24 boinc_setup_complete
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user      8192 Mar 31 13:24 boinc_mmap_file
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user         0 Mar 31 13:24 boinc_lockfile
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user      2579 Mar 31 13:24 pandaJob.out
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user   1003225 Mar 31 13:24 agis_schedconf.cvmfs.json
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user   1511579 Mar 31 13:24 agis_ddmendpoints.agis.ALL.json
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user       420 Mar 31 13:24 workernode_map.json
[2026-03-31 14:13:34] drwx------ 5 mf493845 unix-user       480 Mar 31 13:24 pilot3
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user 179900321 Mar 31 14:12 HITS.49499762._000046.pool.root.1
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user      1016 Mar 31 14:12 memory_monitor_summary.json
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user    295158 Mar 31 14:12 log.49499762._000046.job.log.tgz.1
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user      6318 Mar 31 14:12 heartbeat_new.json
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user      6208 Mar 31 14:12 heartbeat.json
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user        95 Mar 31 14:13 pilot_heartbeat.json
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user      4825 Mar 31 14:13 pilotlog.txt
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user    320761 Mar 31 14:13 log.49499762._000046.job.log.1
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user       357 Mar 31 14:13 output.list
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user       620 Mar 31 14:13 runtime_log
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user    634880 Mar 31 14:13 result.tar.gz
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user      9219 Mar 31 14:13 runtime_log.err
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user       638 Mar 31 14:13 nO9KDmV4TR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmL2PKDm4QlKnm.diag
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user     21682 Mar 31 14:13 stderr.txt
[2026-03-31 14:13:34] HITS file was successfully produced:
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user 179900321 Mar 31 14:12 shared/HITS.pool.root.1
[2026-03-31 14:13:34]  *** Contents of shared directory: ***
[2026-03-31 14:13:34] total 431200
[2026-03-31 14:13:34] -rw-r--r-- 2 mf493845 unix-user 260334009 Mar 31 13:24 ATLAS.root_0
[2026-03-31 14:13:34] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 31 13:24 start_atlas.sh
[2026-03-31 14:13:34] -rw-r--r-- 2 mf493845 unix-user    656739 Mar 31 13:24 input.tar.gz
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user 179900321 Mar 31 14:12 HITS.pool.root.1
[2026-03-31 14:13:34] -rw------- 1 mf493845 unix-user    634880 Mar 31 14:13 result.tar.gz
14:13:35 (27997): run_atlas exited; CPU time 20698.354475
14:13:35 (27997): called boinc_finish(0)

</stderr_txt>
]]>

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