Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
08:25:57 (2762583): wrapper (7.7.26015): starting
08:25:57 (2762583): wrapper: running run_atlas (--nthreads 12)
[2026-04-05 08:25:57] Arguments: --nthreads 12
[2026-04-05 08:25:57] Threads: 12
[2026-04-05 08:25:57] Checking for CVMFS
[2026-04-05 08:25:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-05 08:25:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-05 08:25:58] Running cvmfs_config stat atlas.cern.ch
[2026-04-05 08:25:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-05 08:25:59] 2.13.3.0 3021178 15953 74048 158105 2 188 4032844 4096001 20767 130560 0 77362862 99.987 969721 2238 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-05 08:25:59] CVMFS is ok
[2026-04-05 08:25:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 08:25:59] Checking for apptainer binary...
[2026-04-05 08:25:59] apptainer is not installed, using version from CVMFS
[2026-04-05 08:25:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 08:26:00] epyc7v12
[2026-04-05 08:26:00] apptainer works
[2026-04-05 08:26:01] Set ATHENA_PROC_NUMBER=12
[2026-04-05 08:26:01] Set ATHENA_CORE_NUMBER=12
[2026-04-05 08:26:01] Starting ATLAS job with PandaID=7073096030
[2026-04-05 08:26:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31427/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-05 11:03:12]  *** The last 200 lines of the pilot log: ***
[2026-04-05 11:03:12] 2026-04-05 11:02:02,255 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-05 11:03:12] 2026-04-05 11:02:02,255 | INFO     | log transfer has been attempted: DONE
[2026-04-05 11:03:12] 2026-04-05 11:02:02,255 | INFO     | job 7073096030 has finished - writing final server update
[2026-04-05 11:03:12] 2026-04-05 11:02:02,256 | INFO     | total number of processed events: 400 (read)
[2026-04-05 11:03:12] 2026-04-05 11:02:02,308 | INFO     | using path: /opt/boinc/instance_homes/boinc_31427/slots/0/PanDA_Pilot-7073096030/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 11:03:12] 2026-04-05 11:02:02,309 | INFO     | extracted standard info from prmon json
[2026-04-05 11:03:12] 2026-04-05 11:02:02,309 | INFO     | extracted standard memory fields from prmon json
[2026-04-05 11:03:12] 2026-04-05 11:02:02,309 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-05 11:03:12] 2026-04-05 11:02:02,309 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-05 11:03:12] 2026-04-05 11:02:02,318 | INFO     | fitting pss+swap vs Time
[2026-04-05 11:03:12] 2026-04-05 11:02:02,318 | INFO     | sum of square deviations: 1088894165.9736817
[2026-04-05 11:03:12] 2026-04-05 11:02:02,319 | INFO     | sum of deviations: 39172137828.842125
[2026-04-05 11:03:12] 2026-04-05 11:02:02,319 | INFO     | mean x (centered): 0.0
[2026-04-05 11:03:12] 2026-04-05 11:02:02,319 | INFO     | mean y: 2576325.0789473685
[2026-04-05 11:03:12] 2026-04-05 11:02:02,319 | INFO     | intersect: 2576325.0789473685
[2026-04-05 11:03:12] 2026-04-05 11:02:02,320 | INFO     | chi2: 3.396432790745042
[2026-04-05 11:03:12] 2026-04-05 11:02:02,325 | INFO     | sum of square deviations: 984930035.9727925
[2026-04-05 11:03:12] 2026-04-05 11:02:02,327 | INFO     | sum of deviations: 48875362745.088455
[2026-04-05 11:03:12] 2026-04-05 11:02:02,327 | INFO     | mean x (centered): 0.0
[2026-04-05 11:03:12] 2026-04-05 11:02:02,327 | INFO     | mean y: 2590113.455782313
[2026-04-05 11:03:12] 2026-04-05 11:02:02,328 | INFO     | intersect: 2590113.455782313
[2026-04-05 11:03:12] 2026-04-05 11:02:02,328 | INFO     | chi2: 2.530615529672287
[2026-04-05 11:03:12] 2026-04-05 11:02:02,328 | INFO     | current chi2=2.530615529672287 (change=25.491959194129354 %)
[2026-04-05 11:03:12] 2026-04-05 11:02:02,328 | INFO     | sum of square deviations: 887803243.4718295
[2026-04-05 11:03:12] 2026-04-05 11:02:02,334 | INFO     | sum of deviations: 47041777158.359146
[2026-04-05 11:03:12] 2026-04-05 11:02:02,335 | INFO     | mean x (centered): 0.0
[2026-04-05 11:03:12] 2026-04-05 11:02:02,335 | INFO     | mean y: 2587234.5704225353
[2026-04-05 11:03:12] 2026-04-05 11:02:02,335 | INFO     | intersect: 2587234.5704225353
[2026-04-05 11:03:12] 2026-04-05 11:02:02,335 | INFO     | chi2: 2.529895896389563
[2026-04-05 11:03:12] 2026-04-05 11:02:02,335 | INFO     | current chi2=2.529895896389563 (change=0.02843708474425456 %)
[2026-04-05 11:03:12] 2026-04-05 11:02:02,337 | INFO     | right removable region: 141
[2026-04-05 11:03:12] 2026-04-05 11:02:02,337 | INFO     | sum of square deviations: 984928815.9727925
[2026-04-05 11:03:12] 2026-04-05 11:02:02,338 | INFO     | sum of deviations: 2873721110.122444
[2026-04-05 11:03:12] 2026-04-05 11:02:02,339 | INFO     | mean x (centered): 0.0
[2026-04-05 11:03:12] 2026-04-05 11:02:02,339 | INFO     | mean y: 2629174.93877551
[2026-04-05 11:03:12] 2026-04-05 11:02:02,339 | INFO     | intersect: 2629174.93877551
[2026-04-05 11:03:12] 2026-04-05 11:02:02,339 | INFO     | chi2: 1.1641290460310552
[2026-04-05 11:03:12] 2026-04-05 11:02:02,340 | INFO     | current chi2=1.1641290460310552 (change=65.72494974129337 %)
[2026-04-05 11:03:12] 2026-04-05 11:02:02,340 | INFO     | sum of square deviations: 887809647.4929576
[2026-04-05 11:03:12] 2026-04-05 11:02:02,341 | INFO     | sum of deviations: -9337928082.774649
[2026-04-05 11:03:12] 2026-04-05 11:02:02,341 | INFO     | mean x (centered): 0.0
[2026-04-05 11:03:12] 2026-04-05 11:02:02,343 | INFO     | mean y: 2648288.7746478873
[2026-04-05 11:03:12] 2026-04-05 11:02:02,343 | INFO     | intersect: 2648288.7746478873
[2026-04-05 11:03:12] 2026-04-05 11:02:02,343 | INFO     | chi2: 0.9433835034049256
[2026-04-05 11:03:12] 2026-04-05 11:02:02,343 | INFO     | current chi2=0.9433835034049256 (change=18.962291455464705 %)
[2026-04-05 11:03:12] 2026-04-05 11:02:02,344 | INFO     | left removable region: 10
[2026-04-05 11:03:12] 2026-04-05 11:02:02,344 | INFO     | sum of square deviations: 697051392.9923683
[2026-04-05 11:03:12] 2026-04-05 11:02:02,346 | INFO     | sum of deviations: 1168326242.9618323
[2026-04-05 11:03:12] 2026-04-05 11:02:02,347 | INFO     | mean x (centered): 0.0
[2026-04-05 11:03:12] 2026-04-05 11:02:02,347 | INFO     | mean y: 2665462.038167939
[2026-04-05 11:03:12] 2026-04-05 11:02:02,347 | INFO     | intersect: 2665462.038167939
[2026-04-05 11:03:12] 2026-04-05 11:02:02,349 | INFO     | chi2: 0.03904694667253089
[2026-04-05 11:03:12] 2026-04-05 11:02:02,349 | INFO     | current memory leak: 1.68 B/s (using 131 data points, chi2=0.04)
[2026-04-05 11:03:12] 2026-04-05 11:02:02,350 | INFO     | could have reported an average CPU frequency of 2398 MHz (9 samples)
[2026-04-05 11:03:12] 2026-04-05 11:02:02,350 | INFO     | ..............................
[2026-04-05 11:03:12] 2026-04-05 11:02:02,350 | INFO     | . Timing measurements:
[2026-04-05 11:03:12] 2026-04-05 11:02:02,350 | INFO     | . get job = 0 s
[2026-04-05 11:03:12] 2026-04-05 11:02:02,350 | INFO     | . initial setup = 17 s
[2026-04-05 11:03:12] 2026-04-05 11:02:02,350 | INFO     | . payload setup = 29 s
[2026-04-05 11:03:12] 2026-04-05 11:02:02,350 | INFO     | . stage-in = 0 s
[2026-04-05 11:03:12] 2026-04-05 11:02:02,350 | INFO     | . payload execution = 9271 s
[2026-04-05 11:03:12] 2026-04-05 11:02:02,351 | INFO     | . stage-out = 1 s
[2026-04-05 11:03:12] 2026-04-05 11:02:02,351 | INFO     | . log creation = 0 s
[2026-04-05 11:03:12] 2026-04-05 11:02:02,351 | INFO     | ..............................
[2026-04-05 11:03:12] 2026-04-05 11:02:02,511 | INFO     | 
[2026-04-05 11:03:12] 2026-04-05 11:02:02,512 | INFO     | job summary report
[2026-04-05 11:03:12] 2026-04-05 11:02:02,512 | INFO     | --------------------------------------------------
[2026-04-05 11:03:12] 2026-04-05 11:02:02,512 | INFO     | PanDA job id: 7073096030
[2026-04-05 11:03:12] 2026-04-05 11:02:02,512 | INFO     | task id: 49263208
[2026-04-05 11:03:12] 2026-04-05 11:02:02,512 | INFO     | errors: (none)
[2026-04-05 11:03:12] 2026-04-05 11:02:02,512 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-05 11:03:12] 2026-04-05 11:02:02,512 | INFO     | pilot state: finished 
[2026-04-05 11:03:12] 2026-04-05 11:02:02,513 | INFO     | transexitcode: 0
[2026-04-05 11:03:12] 2026-04-05 11:02:02,513 | INFO     | exeerrorcode: 0
[2026-04-05 11:03:12] 2026-04-05 11:02:02,513 | INFO     | exeerrordiag: 
[2026-04-05 11:03:12] 2026-04-05 11:02:02,513 | INFO     | exitcode: 0
[2026-04-05 11:03:12] 2026-04-05 11:02:02,513 | INFO     | exitmsg: OK
[2026-04-05 11:03:12] 2026-04-05 11:02:02,513 | INFO     | cpuconsumptiontime: 47752 s
[2026-04-05 11:03:12] 2026-04-05 11:02:02,513 | INFO     | nevents: 400
[2026-04-05 11:03:12] 2026-04-05 11:02:02,513 | INFO     | neventsw: 0
[2026-04-05 11:03:12] 2026-04-05 11:02:02,513 | INFO     | pid: 2789639
[2026-04-05 11:03:12] 2026-04-05 11:02:02,513 | INFO     | pgrp: 2789639
[2026-04-05 11:03:12] 2026-04-05 11:02:02,513 | INFO     | corecount: 12
[2026-04-05 11:03:12] 2026-04-05 11:02:02,513 | INFO     | event service: False
[2026-04-05 11:03:12] 2026-04-05 11:02:02,514 | INFO     | sizes: {0: 2279813, 1: 2281642, 2: 2281642, 9304: 2310072, 9306: 2319116, 9307: 2319172, 9309: 2319558}
[2026-04-05 11:03:12] 2026-04-05 11:02:02,514 | INFO     | --------------------------------------------------
[2026-04-05 11:03:12] 2026-04-05 11:02:02,514 | INFO     | 
[2026-04-05 11:03:12] 2026-04-05 11:02:02,514 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31427/slots/0
[2026-04-05 11:03:12] 2026-04-05 11:02:02,573 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,574 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,574 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,574 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,575 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,575 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,575 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,575 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,575 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,575 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,575 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,575 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,575 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,575 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-05 11:03:12] 2026-04-05 11:02:02,575 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,576 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-05 11:03:12] 2026-04-05 11:02:02,576 | INFO     | job 7073096030 has completed (purged errors)
[2026-04-05 11:03:12] 2026-04-05 11:02:02,578 | INFO     | overall cleanup function is called
[2026-04-05 11:03:12] 2026-04-05 11:02:03,594 | INFO     | --- collectZombieJob: --- 10, [2789639]
[2026-04-05 11:03:12] 2026-04-05 11:02:03,596 | INFO     | zombie collector waiting for pid 2789639
[2026-04-05 11:03:12] 2026-04-05 11:02:03,596 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-05 11:03:12] 2026-04-05 11:02:03,596 | INFO     | collected zombie processes
[2026-04-05 11:03:12] 2026-04-05 11:02:03,596 | INFO     | will attempt to kill all subprocesses of pid=2789639
[2026-04-05 11:03:12] 2026-04-05 11:02:04,818 | INFO     | process IDs to be killed: [2789639] (in reverse order)
[2026-04-05 11:03:12] 2026-04-05 11:02:05,330 | WARNING  | found no corresponding commands to process id(s)
[2026-04-05 11:03:12] 2026-04-05 11:02:05,330 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-05 11:03:12] 2026-04-05 11:02:05,352 | INFO     | did not find any defunct processes belonging to 2789639
[2026-04-05 11:03:12] 2026-04-05 11:02:05,375 | INFO     | did not find any defunct processes belonging to 2789639
[2026-04-05 11:03:12] 2026-04-05 11:02:05,375 | INFO     | Ready for new job
[2026-04-05 11:03:12] 2026-04-05 11:02:05,377 | INFO     | **************************************
[2026-04-05 11:03:12] 2026-04-05 11:02:05,377 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-05 11:03:12] 2026-04-05 11:02:05,377 | INFO     | **************************************
[2026-04-05 11:03:12] 2026-04-05 11:02:05,377 | INFO     | 
[2026-04-05 11:03:12] 2026-04-05 11:02:05,386 | INFO     | architecture information:
[2026-04-05 11:03:12] 2026-04-05 11:02:05,387 | INFO     | executing command: cat /etc/os-release
[2026-04-05 11:03:12] 2026-04-05 11:02:05,432 | INFO     | cat /etc/os-release:
[2026-04-05 11:03:12] NAME="CentOS Linux"
[2026-04-05 11:03:12] VERSION="7 (Core)"
[2026-04-05 11:03:12] ID="centos"
[2026-04-05 11:03:12] ID_LIKE="rhel fedora"
[2026-04-05 11:03:12] VERSION_ID="7"
[2026-04-05 11:03:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-05 11:03:12] ANSI_COLOR="0;31"
[2026-04-05 11:03:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-05 11:03:12] HOME_URL="https://www.centos.org/"
[2026-04-05 11:03:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-05 11:03:12] 
[2026-04-05 11:03:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-05 11:03:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-05 11:03:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-05 11:03:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-05 11:03:12] 
[2026-04-05 11:03:12] 2026-04-05 11:02:05,433 | INFO     | **************************************
[2026-04-05 11:03:12] 2026-04-05 11:02:05,938 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31427/slots/0
[2026-04-05 11:03:12] 2026-04-05 11:02:05,980 | INFO     | sufficient remaining disk space (391344291840 B)
[2026-04-05 11:03:12] 2026-04-05 11:02:05,980 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-05 11:03:12] 2026-04-05 11:02:05,980 | INFO     | current server update state: UPDATING_FINAL
[2026-04-05 11:03:12] 2026-04-05 11:02:05,980 | INFO     | update_server=False
[2026-04-05 11:03:12] 2026-04-05 11:02:05,981 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-05 11:03:12] 2026-04-05 11:02:06,315 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-05 11:03:12] 2026-04-05 11:02:06,315 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-05 11:03:12] 2026-04-05 11:02:06,316 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-05 11:03:12] 2026-04-05 11:02:06,316 | INFO     | will abort loop
[2026-04-05 11:03:12] 2026-04-05 11:02:06,365 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-05 11:03:12] 2026-04-05 11:02:06,463 | INFO     | all payload control threads have been joined
[2026-04-05 11:03:12] 2026-04-05 11:02:06,562 | INFO     | all data control threads have been joined
[2026-04-05 11:03:12] 2026-04-05 11:02:06,868 | INFO     | all job control threads have been joined
[2026-04-05 11:03:12] 2026-04-05 11:02:06,987 | INFO     | [job] retrieve thread has finished
[2026-04-05 11:03:12] 2026-04-05 11:02:07,266 | INFO     | [payload] execute_payloads thread has finished
[2026-04-05 11:03:12] 2026-04-05 11:02:07,274 | INFO     | [payload] validate_pre thread has finished
[2026-04-05 11:03:12] 2026-04-05 11:02:07,320 | INFO     | [job] job monitor thread has finished
[2026-04-05 11:03:12] 2026-04-05 11:02:07,358 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-05 11:03:12] 2026-04-05 11:02:07,468 | INFO     | [payload] control thread has finished
[2026-04-05 11:03:12] 2026-04-05 11:02:07,521 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-05 11:03:12] 2026-04-05 11:02:07,521 | INFO     | [job] validate thread has finished
[2026-04-05 11:03:12] 2026-04-05 11:02:07,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-05 11:03:12] 2026-04-05 11:02:07,567 | INFO     | [data] control thread has finished
[2026-04-05 11:03:12] 2026-04-05 11:02:07,634 | INFO     | [job] create_data_payload thread has finished
[2026-04-05 11:03:12] 2026-04-05 11:02:07,876 | INFO     | [job] control thread has finished
[2026-04-05 11:03:12] 2026-04-05 11:02:08,027 | INFO     | [payload] failed_post thread has finished
[2026-04-05 11:03:12] 2026-04-05 11:02:08,132 | INFO     | [payload] validate_post thread has finished
[2026-04-05 11:03:12] 2026-04-05 11:02:08,264 | INFO     | [data] copytool_in thread has finished
[2026-04-05 11:03:12] 2026-04-05 11:02:08,532 | INFO     | [job] queue monitor thread has finished
[2026-04-05 11:03:12] 2026-04-05 11:02:09,363 | INFO     | [data] copytool_out thread has finished
[2026-04-05 11:03:12] 2026-04-05 11:02:10,372 | INFO     | [data] queue_monitor thread has finished
[2026-04-05 11:03:12] 2026-04-05 11:02:35,329 | INFO     | PID=2775570 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-05 11:03:12] 2026-04-05 11:02:35,329 | INFO     | .. there are 23 such processes running
[2026-04-05 11:03:12] 2026-04-05 11:02:35,329 | INFO     | found 0 job(s) in 20 queues
[2026-04-05 11:03:12] 2026-04-05 11:02:35,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-05 11:03:12] 2026-04-05 11:02:35,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-05 11:03:12] 2026-04-05 11:03:05,760 | INFO     | [monitor] cgroup control has ended
[2026-04-05 11:03:12] 2026-04-05 11:03:06,882 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138504226649920)>', '<ExcThread(monitor, started 138503694313216)>']
[2026-04-05 11:03:12] 2026-04-05 11:03:07,498 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-05 11:03:12] 2026-04-05 11:03:07,498 | INFO     | [monitor] control thread has ended
[2026-04-05 11:03:12] 2026-04-05 11:03:11,907 | INFO     | all workflow threads have been joined
[2026-04-05 11:03:12] 2026-04-05 11:03:11,907 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-05 11:03:12] 2026-04-05 11:03:11,907 | INFO     | traces error code: 0
[2026-04-05 11:03:12] 2026-04-05 11:03:11,908 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-05 11:03:12] 2026-04-05 11:03:12,200 [wrapper] ==== pilot stdout END ====
[2026-04-05 11:03:12] 2026-04-05 11:03:12,214 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-05 11:03:12] 2026-04-05 11:03:12,226 [wrapper] pilotpid: 2775570
[2026-04-05 11:03:12] 2026-04-05 11:03:12,231 [wrapper] Pilot exit status: 0
[2026-04-05 11:03:12] 2026-04-05 11:03:12,273 [wrapper] pandaids: 7073096030
[2026-04-05 11:03:12] 2026-04-05 11:03:12,623 [wrapper] cleanup supervisor_pilot 3024297 2775571
[2026-04-05 11:03:12] 2026-04-05 11:03:12,632 [wrapper] Test setup, not cleaning
[2026-04-05 11:03:12] 2026-04-05 11:03:12,640 [wrapper] apfmon messages muted
[2026-04-05 11:03:12] 2026-04-05 11:03:12,649 [wrapper] ==== wrapper stdout END ====
[2026-04-05 11:03:12] 2026-04-05 11:03:12,665 [wrapper] ==== wrapper stderr END ====
[2026-04-05 11:03:12]  *** Error codes and diagnostics ***
[2026-04-05 11:03:12]     "exeErrorCode": 0,
[2026-04-05 11:03:12]     "pilotErrorCode": 0,
[2026-04-05 11:03:12]  *** Listing of results directory ***
[2026-04-05 11:03:12] total 414432
[2026-04-05 11:03:12] -rw-r--r-- 1 boinc boinc    644034 Mar 31 08:26 pilot3.tar.gz
[2026-04-05 11:03:12] -rwx------ 1 boinc boinc     36322 Mar 31 08:31 runpilot2-wrapper.sh
[2026-04-05 11:03:12] -rw-r--r-- 1 boinc boinc      5118 Mar 31 08:31 queuedata.json
[2026-04-05 11:03:12] -rw-rw-r-- 1 boinc boinc       100 Apr  5 08:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-05 11:03:12] -rwxr-xr-x 1 boinc boinc      7986 Apr  5 08:25 run_atlas
[2026-04-05 11:03:12] -rw-rw-r-- 1 boinc boinc       105 Apr  5 08:25 job.xml
[2026-04-05 11:03:12] -rw-r--r-- 2 boinc boinc 220716724 Apr  5 08:25 EVNT.49263206._000634.pool.root.1
[2026-04-05 11:03:12] -rw-r--r-- 2 boinc boinc     15845 Apr  5 08:25 start_atlas.sh
[2026-04-05 11:03:12] drwxrwx--x 2 boinc boinc      4096 Apr  5 08:25 shared
[2026-04-05 11:03:12] -rw-r--r-- 2 boinc boinc    656747 Apr  5 08:25 input.tar.gz
[2026-04-05 11:03:12] -rw-rw-r-- 1 boinc boinc      6557 Apr  5 08:25 init_data.xml
[2026-04-05 11:03:12] -rw-rw-r-- 1 boinc boinc         0 Apr  5 08:25 boinc_setup_complete
[2026-04-05 11:03:12] -rw-rw-r-- 1 boinc boinc         0 Apr  5 08:25 boinc_lockfile
[2026-04-05 11:03:12] -rw-rw-r-- 1 boinc boinc      2575 Apr  5 08:26 pandaJob.out
[2026-04-05 11:03:12] -rw------- 1 boinc boinc   1005096 Apr  5 08:26 agis_schedconf.cvmfs.json
[2026-04-05 11:03:12] -rw------- 1 boinc boinc   1511579 Apr  5 08:26 agis_ddmendpoints.agis.ALL.json
[2026-04-05 11:03:12] -rw------- 1 boinc boinc       413 Apr  5 08:26 workernode_map.json
[2026-04-05 11:03:12] drwx------ 5 boinc boinc      4096 Apr  5 08:26 pilot3
[2026-04-05 11:03:12] -rw------- 1 boinc boinc 197072152 Apr  5 11:00 HITS.49263208._014622.pool.root.1
[2026-04-05 11:03:12] -rw-rw-r-- 1 boinc boinc       530 Apr  5 11:01 boinc_task_state.xml
[2026-04-05 11:03:12] -rw------- 1 boinc boinc        95 Apr  5 11:01 pilot_heartbeat.json
[2026-04-05 11:03:12] -rw------- 1 boinc boinc      1022 Apr  5 11:01 memory_monitor_summary.json
[2026-04-05 11:03:12] -rw------- 1 boinc boinc    419133 Apr  5 11:01 log.49263208._014622.job.log.tgz.1
[2026-04-05 11:03:12] -rw------- 1 boinc boinc      6288 Apr  5 11:02 heartbeat_new.json
[2026-04-05 11:03:12] -rw------- 1 boinc boinc      6179 Apr  5 11:02 heartbeat.json
[2026-04-05 11:03:12] -rw-rw-r-- 1 boinc boinc      8192 Apr  5 11:03 boinc_mmap_file
[2026-04-05 11:03:12] -rw------- 1 boinc boinc      5029 Apr  5 11:03 pilotlog.txt
[2026-04-05 11:03:12] -rw-rw-r-- 1 boinc boinc        27 Apr  5 11:03 wrapper_checkpoint.txt
[2026-04-05 11:03:12] -rw------- 1 boinc boinc    839571 Apr  5 11:03 log.49263208._014622.job.log.1
[2026-04-05 11:03:12] -rw------- 1 boinc boinc       357 Apr  5 11:03 output.list
[2026-04-05 11:03:12] -rw-rw-r-- 1 boinc boinc       620 Apr  5 11:03 runtime_log
[2026-04-05 11:03:12] -rw------- 1 boinc boinc   1280000 Apr  5 11:03 result.tar.gz
[2026-04-05 11:03:12] -rw-rw-r-- 1 boinc boinc      9166 Apr  5 11:03 runtime_log.err
[2026-04-05 11:03:12] -rw------- 1 boinc boinc       652 Apr  5 11:03 TeeKDmEgjR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDm3gQKDmmJkUBn.diag
[2026-04-05 11:03:12] -rw-rw-r-- 1 boinc boinc     20824 Apr  5 11:03 stderr.txt
[2026-04-05 11:03:12] HITS file was successfully produced:
[2026-04-05 11:03:12] -rw------- 1 boinc boinc 197072152 Apr  5 11:00 shared/HITS.pool.root.1
[2026-04-05 11:03:12]  *** Contents of shared directory: ***
[2026-04-05 11:03:12] total 409920
[2026-04-05 11:03:12] -rw-r--r-- 2 boinc boinc 220716724 Apr  5 08:25 ATLAS.root_0
[2026-04-05 11:03:12] -rw-r--r-- 2 boinc boinc     15845 Apr  5 08:25 start_atlas.sh
[2026-04-05 11:03:12] -rw-r--r-- 2 boinc boinc    656747 Apr  5 08:25 input.tar.gz
[2026-04-05 11:03:12] -rw------- 1 boinc boinc 197072152 Apr  5 11:00 HITS.pool.root.1
[2026-04-05 11:03:12] -rw------- 1 boinc boinc   1280000 Apr  5 11:03 result.tar.gz
11:03:14 (2762583): run_atlas exited; CPU time 48323.092536
11:03:14 (2762583): called boinc_finish(0)

</stderr_txt>
]]>

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