Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:59:09 (7858): wrapper (7.7.26015): starting
20:59:09 (7858): wrapper: running run_atlas (--nthreads 8)
[2026-03-31 20:59:09] Arguments: --nthreads 8
[2026-03-31 20:59:09] Threads: 8
[2026-03-31 20:59:09] Checking for CVMFS
[2026-03-31 20:59:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 20:59:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 20:59:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 20:59:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 20:59:13] 2.11.2.0 23754 152445 138532 157928 3 54 14449426 25165824 4688 130560 157 42381901 99.825 30829893 1025 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-31 20:59:13] CVMFS is ok
[2026-03-31 20:59:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 20:59:13] Checking for apptainer binary...
[2026-03-31 20:59:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 20:59:13] Running /usr/bin/apptainer --version
[2026-03-31 20:59:14] apptainer version 1.3.2-1.el7
[2026-03-31 20:59:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 20:59:42] cg-vwn493.simple-grid.lan
[2026-03-31 20:59:42] apptainer works
[2026-03-31 20:59:42] Set ATHENA_PROC_NUMBER=8
[2026-03-31 20:59:42] Set ATHENA_CORE_NUMBER=8
[2026-03-31 20:59:42] Starting ATLAS job with PandaID=7073093593
[2026-03-31 20:59:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 00:32:17]  *** The last 200 lines of the pilot log: ***
[2026-04-01 00:32:17] 2026-03-31 22:31:33,261 | INFO     | this job has now completed (state=finished)
[2026-04-01 00:32:17] 2026-03-31 22:31:33,261 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-01 00:32:17] 2026-03-31 22:31:33,261 | INFO     | log transfer has been attempted: DONE
[2026-04-01 00:32:17] 2026-03-31 22:31:33,261 | INFO     | job 7073093593 has finished - writing final server update
[2026-04-01 00:32:17] 2026-03-31 22:31:33,262 | INFO     | total number of processed events: 400 (read)
[2026-04-01 00:32:17] 2026-03-31 22:31:33,263 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7073093593/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 00:32:17] 2026-03-31 22:31:33,264 | INFO     | extracted standard info from prmon json
[2026-04-01 00:32:17] 2026-03-31 22:31:33,264 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 00:32:17] 2026-03-31 22:31:33,264 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 00:32:17] 2026-03-31 22:31:33,264 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 00:32:17] 2026-03-31 22:31:33,268 | INFO     | fitting pss+swap vs Time
[2026-04-01 00:32:17] 2026-03-31 22:31:33,268 | INFO     | sum of square deviations: 2443580700.0
[2026-04-01 00:32:17] 2026-03-31 22:31:33,270 | INFO     | sum of deviations: 56686836887.999985
[2026-04-01 00:32:17] 2026-03-31 22:31:33,270 | INFO     | mean x (centered): 0.0
[2026-04-01 00:32:17] 2026-03-31 22:31:33,270 | INFO     | mean y: 2450320.783919598
[2026-04-01 00:32:17] 2026-03-31 22:31:33,270 | INFO     | intersect: 2450320.783919598
[2026-04-01 00:32:17] 2026-03-31 22:31:33,271 | INFO     | chi2: 6.850071869020509
[2026-04-01 00:32:17] 2026-03-31 22:31:33,271 | INFO     | sum of square deviations: 2263977332.5
[2026-04-01 00:32:17] 2026-03-31 22:31:33,272 | INFO     | sum of deviations: 68607734712.500015
[2026-04-01 00:32:17] 2026-03-31 22:31:33,272 | INFO     | mean x (centered): 0.0
[2026-04-01 00:32:17] 2026-03-31 22:31:33,277 | INFO     | mean y: 2460214.943298969
[2026-04-01 00:32:17] 2026-03-31 22:31:33,277 | INFO     | intersect: 2460214.943298969
[2026-04-01 00:32:17] 2026-03-31 22:31:33,277 | INFO     | chi2: 6.148439929587222
[2026-04-01 00:32:17] 2026-03-31 22:31:33,277 | INFO     | current chi2=6.148439929587222 (change=10.242694570934669 %)
[2026-04-01 00:32:17] 2026-03-31 22:31:33,277 | INFO     | right removable region: 193
[2026-04-01 00:32:17] 2026-03-31 22:31:33,278 | INFO     | sum of square deviations: 2263977332.5
[2026-04-01 00:32:17] 2026-03-31 22:31:33,279 | INFO     | sum of deviations: -11709433150.5
[2026-04-01 00:32:17] 2026-03-31 22:31:33,279 | INFO     | mean x (centered): 0.0
[2026-04-01 00:32:17] 2026-03-31 22:31:33,279 | INFO     | mean y: 2508337.3865979384
[2026-04-01 00:32:17] 2026-03-31 22:31:33,279 | INFO     | intersect: 2508337.3865979384
[2026-04-01 00:32:17] 2026-03-31 22:31:33,280 | INFO     | chi2: 2.0609099066998464
[2026-04-01 00:32:17] 2026-03-31 22:31:33,280 | INFO     | current chi2=2.0609099066998464 (change=69.91403964649884 %)
[2026-04-01 00:32:17] 2026-03-31 22:31:33,280 | INFO     | sum of square deviations: 2093397390.0
[2026-04-01 00:32:17] 2026-03-31 22:31:33,281 | INFO     | sum of deviations: -41374973738.0
[2026-04-01 00:32:17] 2026-03-31 22:31:33,281 | INFO     | mean x (centered): 0.0
[2026-04-01 00:32:17] 2026-03-31 22:31:33,281 | INFO     | mean y: 2534634.005291005
[2026-04-01 00:32:17] 2026-03-31 22:31:33,282 | INFO     | intersect: 2534634.005291005
[2026-04-01 00:32:17] 2026-03-31 22:31:33,282 | INFO     | chi2: 0.8756767614550605
[2026-04-01 00:32:17] 2026-03-31 22:31:33,282 | INFO     | current chi2=0.8756767614550605 (change=57.5101871940977 %)
[2026-04-01 00:32:17] 2026-03-31 22:31:33,282 | INFO     | sum of square deviations: 1931608310.0
[2026-04-01 00:32:17] 2026-03-31 22:31:33,283 | INFO     | sum of deviations: -41434503211.0
[2026-04-01 00:32:17] 2026-03-31 22:31:33,284 | INFO     | mean x (centered): 0.0
[2026-04-01 00:32:17] 2026-03-31 22:31:33,284 | INFO     | mean y: 2534652.3586956523
[2026-04-01 00:32:17] 2026-03-31 22:31:33,284 | INFO     | intersect: 2534652.3586956523
[2026-04-01 00:32:17] 2026-03-31 22:31:33,284 | INFO     | chi2: 0.8591919880077651
[2026-04-01 00:32:17] 2026-03-31 22:31:33,284 | INFO     | current chi2=0.8591919880077651 (change=1.8825180903400474 %)
[2026-04-01 00:32:17] 2026-03-31 22:31:33,284 | INFO     | left removable region: 15
[2026-04-01 00:32:17] 2026-03-31 22:31:33,284 | INFO     | sum of square deviations: 1748737904.5
[2026-04-01 00:32:17] 2026-03-31 22:31:33,286 | INFO     | sum of deviations: -27819647495.000004
[2026-04-01 00:32:17] 2026-03-31 22:31:33,286 | INFO     | mean x (centered): 0.0
[2026-04-01 00:32:17] 2026-03-31 22:31:33,286 | INFO     | mean y: 2547943.011235955
[2026-04-01 00:32:17] 2026-03-31 22:31:33,286 | INFO     | intersect: 2547943.011235955
[2026-04-01 00:32:17] 2026-03-31 22:31:33,286 | INFO     | chi2: 0.06606920862159267
[2026-04-01 00:32:17] 2026-03-31 22:31:33,286 | INFO     | current memory leak: -15.91 B/s (using 178 data points, chi2=0.07)
[2026-04-01 00:32:17] 2026-03-31 22:31:33,287 | INFO     | could have reported an average CPU frequency of 2249 MHz (10 samples)
[2026-04-01 00:32:17] 2026-03-31 22:31:33,287 | INFO     | ..............................
[2026-04-01 00:32:17] 2026-03-31 22:31:33,287 | INFO     | . Timing measurements:
[2026-04-01 00:32:17] 2026-03-31 22:31:33,287 | INFO     | . get job = 0 s
[2026-04-01 00:32:17] 2026-03-31 22:31:33,287 | INFO     | . initial setup = 95 s
[2026-04-01 00:32:17] 2026-03-31 22:31:33,287 | INFO     | . payload setup = 155 s
[2026-04-01 00:32:17] 2026-03-31 22:31:33,287 | INFO     | . stage-in = 0 s
[2026-04-01 00:32:17] 2026-03-31 22:31:33,287 | INFO     | . payload execution = 12226 s
[2026-04-01 00:32:17] 2026-03-31 22:31:33,287 | INFO     | . stage-out = 3 s
[2026-04-01 00:32:17] 2026-03-31 22:31:33,287 | INFO     | . log creation = 1 s
[2026-04-01 00:32:17] 2026-03-31 22:31:33,288 | INFO     | ..............................
[2026-04-01 00:32:17] 2026-03-31 22:31:33,429 | INFO     | 
[2026-04-01 00:32:17] 2026-03-31 22:31:33,429 | INFO     | job summary report
[2026-04-01 00:32:17] 2026-03-31 22:31:33,430 | INFO     | --------------------------------------------------
[2026-04-01 00:32:17] 2026-03-31 22:31:33,430 | INFO     | PanDA job id: 7073093593
[2026-04-01 00:32:17] 2026-03-31 22:31:33,430 | INFO     | task id: 49263208
[2026-04-01 00:32:17] 2026-03-31 22:31:33,430 | INFO     | errors: (none)
[2026-04-01 00:32:17] 2026-03-31 22:31:33,430 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 00:32:17] 2026-03-31 22:31:33,430 | INFO     | pilot state: finished 
[2026-04-01 00:32:17] 2026-03-31 22:31:33,430 | INFO     | transexitcode: 0
[2026-04-01 00:32:17] 2026-03-31 22:31:33,430 | INFO     | exeerrorcode: 0
[2026-04-01 00:32:17] 2026-03-31 22:31:33,430 | INFO     | exeerrordiag: 
[2026-04-01 00:32:17] 2026-03-31 22:31:33,430 | INFO     | exitcode: 0
[2026-04-01 00:32:17] 2026-03-31 22:31:33,431 | INFO     | exitmsg: OK
[2026-04-01 00:32:17] 2026-03-31 22:31:33,431 | INFO     | cpuconsumptiontime: 46937 s
[2026-04-01 00:32:17] 2026-03-31 22:31:33,431 | INFO     | nevents: 400
[2026-04-01 00:32:17] 2026-03-31 22:31:33,431 | INFO     | neventsw: 0
[2026-04-01 00:32:17] 2026-03-31 22:31:33,431 | INFO     | pid: 16583
[2026-04-01 00:32:17] 2026-03-31 22:31:33,431 | INFO     | pgrp: 16583
[2026-04-01 00:32:17] 2026-03-31 22:31:33,431 | INFO     | corecount: 8
[2026-04-01 00:32:17] 2026-03-31 22:31:33,431 | INFO     | event service: False
[2026-04-01 00:32:17] 2026-03-31 22:31:33,431 | INFO     | sizes: {0: 2279133, 1: 2279818, 2: 2281647, 13: 2281647, 12385: 2311315, 12390: 2320313, 12391: 2320497, 12394: 2320691}
[2026-04-01 00:32:17] 2026-03-31 22:31:33,431 | INFO     | --------------------------------------------------
[2026-04-01 00:32:17] 2026-03-31 22:31:33,431 | INFO     | 
[2026-04-01 00:32:17] 2026-03-31 22:31:33,432 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-01 00:32:17] 2026-03-31 22:31:33,884 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,884 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,884 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,885 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,885 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,885 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,885 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,885 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,885 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,885 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,885 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,885 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,885 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,885 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,886 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,886 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,886 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,886 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 00:32:17] 2026-03-31 22:31:33,886 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,886 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 00:32:17] 2026-03-31 22:31:33,886 | INFO     | job 7073093593 has completed (purged errors)
[2026-04-01 00:32:17] 2026-03-31 22:31:33,886 | INFO     | overall cleanup function is called
[2026-04-01 00:32:17] 2026-03-31 22:31:34,895 | INFO     | --- collectZombieJob: --- 10, [16583]
[2026-04-01 00:32:17] 2026-03-31 22:31:34,895 | INFO     | zombie collector waiting for pid 16583
[2026-04-01 00:32:17] 2026-03-31 22:31:34,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 00:32:17] 2026-03-31 22:31:34,895 | INFO     | collected zombie processes
[2026-04-01 00:32:17] 2026-03-31 22:31:34,895 | INFO     | will attempt to kill all subprocesses of pid=16583
[2026-04-01 00:32:17] 2026-03-31 22:31:34,987 | INFO     | process IDs to be killed: [16583] (in reverse order)
[2026-04-01 00:32:17] 2026-03-31 22:31:35,708 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 00:32:17] 2026-03-31 22:31:35,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 00:32:17] 2026-03-31 22:31:35,711 | INFO     | did not find any defunct processes belonging to 16583
[2026-04-01 00:32:17] 2026-03-31 22:31:35,714 | INFO     | did not find any defunct processes belonging to 16583
[2026-04-01 00:32:17] 2026-03-31 22:31:35,715 | INFO     | Ready for new job
[2026-04-01 00:32:17] 2026-03-31 22:31:35,716 | INFO     | **************************************
[2026-04-01 00:32:17] 2026-03-31 22:31:35,716 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-01 00:32:17] 2026-03-31 22:31:35,716 | INFO     | **************************************
[2026-04-01 00:32:17] 2026-03-31 22:31:35,716 | INFO     | 
[2026-04-01 00:32:17] 2026-03-31 22:31:35,717 | INFO     | pilot is running in a VM
[2026-04-01 00:32:17] 2026-03-31 22:31:35,717 | INFO     | architecture information:
[2026-04-01 00:32:17] 2026-03-31 22:31:35,717 | INFO     | executing command: cat /etc/os-release
[2026-04-01 00:32:17] 2026-03-31 22:31:35,828 | INFO     | cat /etc/os-release:
[2026-04-01 00:32:17] NAME="CentOS Linux"
[2026-04-01 00:32:17] VERSION="7 (Core)"
[2026-04-01 00:32:17] ID="centos"
[2026-04-01 00:32:17] ID_LIKE="rhel fedora"
[2026-04-01 00:32:17] VERSION_ID="7"
[2026-04-01 00:32:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 00:32:17] ANSI_COLOR="0;31"
[2026-04-01 00:32:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 00:32:17] HOME_URL="https://www.centos.org/"
[2026-04-01 00:32:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 00:32:17] 
[2026-04-01 00:32:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 00:32:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 00:32:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 00:32:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 00:32:17] 
[2026-04-01 00:32:17] 2026-03-31 22:31:35,828 | INFO     | **************************************
[2026-04-01 00:32:17] 2026-03-31 22:31:36,331 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-01 00:32:17] 2026-03-31 22:31:36,535 | INFO     | sufficient remaining disk space (497621663744 B)
[2026-04-01 00:32:17] 2026-03-31 22:31:36,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 00:32:17] 2026-03-31 22:31:36,536 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 00:32:17] 2026-03-31 22:31:36,536 | INFO     | update_server=False
[2026-04-01 00:32:17] 2026-03-31 22:31:36,536 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-01 00:32:17] 2026-03-31 22:31:36,538 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 00:32:17] 2026-03-31 22:31:36,538 | INFO     | aborting loop
[2026-04-01 00:32:17] 2026-03-31 22:31:36,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 00:32:17] 2026-03-31 22:31:37,403 | INFO     | all data control threads have been joined
[2026-04-01 00:32:17] 2026-03-31 22:31:37,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 00:32:17] 2026-03-31 22:31:37,461 | INFO     | all payload control threads have been joined
[2026-04-01 00:32:17] 2026-03-31 22:31:37,543 | INFO     | [job] retrieve thread has finished
[2026-04-01 00:32:17] 2026-03-31 22:31:37,544 | INFO     | [job] job monitor thread has finished
[2026-04-01 00:32:17] 2026-03-31 22:31:37,594 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 00:32:17] 2026-03-31 22:31:37,679 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 00:32:17] 2026-03-31 22:31:37,899 | INFO     | all job control threads have been joined
[2026-04-01 00:32:17] 2026-03-31 22:31:38,153 | INFO     | [data] copytool_in thread has finished
[2026-04-01 00:32:17] 2026-03-31 22:31:38,175 | INFO     | [payload] failed_post thread has finished
[2026-04-01 00:32:17] 2026-03-31 22:31:38,408 | INFO     | [data] control thread has finished
[2026-04-01 00:32:17] 2026-03-31 22:31:38,445 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 00:32:17] 2026-03-31 22:31:38,467 | INFO     | [payload] control thread has finished
[2026-04-01 00:32:17] 2026-03-31 22:31:38,508 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 00:32:17] 2026-03-31 22:31:38,589 | INFO     | [payload] validate_post thread has finished
[2026-04-01 00:32:17] 2026-03-31 22:31:38,823 | INFO     | [job] validate thread has finished
[2026-04-01 00:32:17] 2026-03-31 22:31:38,905 | INFO     | [job] control thread has finished
[2026-04-01 00:32:17] 2026-03-31 22:31:39,044 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 00:32:17] 2026-03-31 22:31:39,450 | INFO     | [job] queue monitor thread has finished
[2026-04-01 00:32:17] 2026-03-31 22:31:39,457 | INFO     | [data] copytool_out thread has finished
[2026-04-01 00:32:17] 2026-03-31 22:31:40,911 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 00:32:17] 2026-03-31 22:32:07,036 | INFO     | PID=12035 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-01 00:32:17] 2026-03-31 22:32:07,036 | INFO     | .. there are 9 such processes running
[2026-04-01 00:32:17] 2026-03-31 22:32:07,037 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 00:32:17] 2026-03-31 22:32:07,037 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 00:32:17] 2026-03-31 22:32:07,037 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 00:32:17] 2026-03-31 22:32:07,115 | INFO     | [monitor] cgroup control has ended
[2026-04-01 00:32:17] 2026-03-31 22:32:08,358 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140235239663424)>', '<ExcThread(monitor, started 140234809390848)>']
[2026-04-01 00:32:17] 2026-03-31 22:32:09,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 00:32:17] 2026-03-31 22:32:09,049 | INFO     | [monitor] control thread has ended
[2026-04-01 00:32:17] 2026-03-31 22:32:13,384 | INFO     | all workflow threads have been joined
[2026-04-01 00:32:17] 2026-03-31 22:32:13,384 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 00:32:17] 2026-03-31 22:32:13,384 | INFO     | traces error code: 0
[2026-04-01 00:32:17] 2026-03-31 22:32:13,384 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 00:32:17] 2026-03-31 22:32:13,696 [wrapper] ==== pilot stdout END ====
[2026-04-01 00:32:17] 2026-03-31 22:32:13,760 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 00:32:17] 2026-03-31 22:32:13,808 [wrapper] pilotpid: 12035
[2026-04-01 00:32:17] 2026-03-31 22:32:13,865 [wrapper] Pilot exit status: 0
[2026-04-01 00:32:17] 2026-03-31 22:32:14,337 [wrapper] pandaids: 7073093593
[2026-04-01 00:32:17] 2026-03-31 22:32:15,207 [wrapper] cleanup supervisor_pilot 24105 12036
[2026-04-01 00:32:17] 2026-03-31 22:32:15,296 [wrapper] Test setup, not cleaning
[2026-04-01 00:32:17] 2026-03-31 22:32:15,344 [wrapper] apfmon messages muted
[2026-04-01 00:32:17] 2026-03-31 22:32:15,405 [wrapper] ==== wrapper stdout END ====
[2026-04-01 00:32:17] 2026-03-31 22:32:15,446 [wrapper] ==== wrapper stderr END ====
[2026-04-01 00:32:17]  *** Error codes and diagnostics ***
[2026-04-01 00:32:17]     "exeErrorCode": 0,
[2026-04-01 00:32:17]     "pilotErrorCode": 0,
[2026-04-01 00:32:17]  *** Listing of results directory ***
[2026-04-01 00:32:17] total 414256
[2026-04-01 00:32:17] -rw-r--r--. 1 boinc boinc    644034 Mar 31 10:26 pilot3.tar.gz
[2026-04-01 00:32:17] -rwx------. 1 boinc boinc     36322 Mar 31 10:30 runpilot2-wrapper.sh
[2026-04-01 00:32:17] -rw-r--r--. 1 boinc boinc      5118 Mar 31 10:31 queuedata.json
[2026-04-01 00:32:17] -rw-r--r--. 1 boinc boinc       100 Mar 31 20:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 00:32:17] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 20:59 run_atlas
[2026-04-01 00:32:17] -rw-r--r--. 1 boinc boinc       105 Mar 31 20:59 job.xml
[2026-04-01 00:32:17] -rw-r--r--. 1 boinc boinc      6390 Mar 31 20:59 init_data.xml
[2026-04-01 00:32:17] -rw-r--r--. 2 boinc boinc 226650242 Mar 31 20:59 EVNT.49263206._000599.pool.root.1
[2026-04-01 00:32:17] -rw-r--r--. 2 boinc boinc     15845 Mar 31 20:59 start_atlas.sh
[2026-04-01 00:32:17] drwxrwx--x. 2 boinc boinc        68 Mar 31 20:59 shared
[2026-04-01 00:32:17] -rw-r--r--. 2 boinc boinc    656752 Mar 31 20:59 input.tar.gz
[2026-04-01 00:32:17] -rw-r--r--. 1 boinc boinc         0 Mar 31 20:59 boinc_lockfile
[2026-04-01 00:32:17] -rw-r--r--. 1 boinc boinc      2575 Mar 31 20:59 pandaJob.out
[2026-04-01 00:32:17] -rw-------. 1 boinc boinc       415 Mar 31 21:04 workernode_map.json
[2026-04-01 00:32:17] -rw-------. 1 boinc boinc   1005006 Mar 31 21:04 agis_schedconf.cvmfs.json
[2026-04-01 00:32:17] drwx------. 5 boinc boinc      4096 Mar 31 21:04 pilot3
[2026-04-01 00:32:17] -rw-------. 1 boinc boinc 190431652 Apr  1 00:30 HITS.49263208._013749.pool.root.1
[2026-04-01 00:32:17] -rw-r--r--. 1 boinc boinc       531 Apr  1 00:30 boinc_task_state.xml
[2026-04-01 00:32:17] -rw-------. 1 boinc boinc      1013 Apr  1 00:31 memory_monitor_summary.json
[2026-04-01 00:32:17] -rw-------. 1 boinc boinc   1511579 Apr  1 00:31 agis_ddmendpoints.agis.ALL.json
[2026-04-01 00:32:17] -rw-------. 1 boinc boinc    389106 Apr  1 00:31 log.49263208._013749.job.log.tgz.1
[2026-04-01 00:32:17] -rw-------. 1 boinc boinc      6344 Apr  1 00:31 heartbeat_new.json
[2026-04-01 00:32:17] -rw-------. 1 boinc boinc      6235 Apr  1 00:31 heartbeat.json
[2026-04-01 00:32:17] -rw-------. 1 boinc boinc        95 Apr  1 00:31 pilot_heartbeat.json
[2026-04-01 00:32:17] -rw-r--r--. 1 boinc boinc      8192 Apr  1 00:31 boinc_mmap_file
[2026-04-01 00:32:17] -rw-r--r--. 1 boinc boinc        28 Apr  1 00:31 wrapper_checkpoint.txt
[2026-04-01 00:32:17] -rw-------. 1 boinc boinc      4879 Apr  1 00:32 pilotlog.txt
[2026-04-01 00:32:17] -rw-------. 1 boinc boinc   1144625 Apr  1 00:32 log.49263208._013749.job.log.1
[2026-04-01 00:32:17] -rw-------. 1 boinc boinc       357 Apr  1 00:32 output.list
[2026-04-01 00:32:17] -rw-r--r--. 1 boinc boinc       620 Apr  1 00:32 runtime_log
[2026-04-01 00:32:17] -rw-------. 1 boinc boinc   1546240 Apr  1 00:32 result.tar.gz
[2026-04-01 00:32:17] -rw-r--r--. 1 boinc boinc      8816 Apr  1 00:32 runtime_log.err
[2026-04-01 00:32:17] -rw-------. 1 boinc boinc       656 Apr  1 00:32 MfvNDmHfjR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmTVSKDmUFwFgm.diag
[2026-04-01 00:32:17] -rw-r--r--. 1 boinc boinc     20638 Apr  1 00:32 stderr.txt
[2026-04-01 00:32:17] HITS file was successfully produced:
[2026-04-01 00:32:17] -rw-------. 1 boinc boinc 190431652 Apr  1 00:30 shared/HITS.pool.root.1
[2026-04-01 00:32:17]  *** Contents of shared directory: ***
[2026-04-01 00:32:17] total 409484
[2026-04-01 00:32:17] -rw-r--r--. 2 boinc boinc 226650242 Mar 31 20:59 ATLAS.root_0
[2026-04-01 00:32:17] -rw-r--r--. 2 boinc boinc     15845 Mar 31 20:59 start_atlas.sh
[2026-04-01 00:32:17] -rw-r--r--. 2 boinc boinc    656752 Mar 31 20:59 input.tar.gz
[2026-04-01 00:32:17] -rw-------. 1 boinc boinc 190431652 Apr  1 00:30 HITS.pool.root.1
[2026-04-01 00:32:17] -rw-------. 1 boinc boinc   1546240 Apr  1 00:32 result.tar.gz
00:32:18 (7858): run_atlas exited; CPU time 47093.351626
00:32:18 (7858): called boinc_finish(0)

</stderr_txt>
]]>

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