Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
14:38:18 (3484192): wrapper (7.7.26015): starting
14:38:18 (3484192): wrapper: running run_atlas (--nthreads 4)
[2026-03-31 14:38:18] Arguments: --nthreads 4
[2026-03-31 14:38:18] Threads: 4
[2026-03-31 14:38:18] Checking for CVMFS
[2026-03-31 14:38:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 14:38:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 14:38:19] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 14:38:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 14:38:19] 2.13.3.0 6294 5465 56852 157928 3 50 2443812 4096001 6454 130560 0 14538653 99.979 280681 1339 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-31 14:38:19] CVMFS is ok
[2026-03-31 14:38:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 14:38:19] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-31 14:38:19] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-31 14:38:19] Further information can be found at the LHC@home message board.
[2026-03-31 14:38:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 14:38:19] Checking for apptainer binary...
[2026-03-31 14:38:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 14:38:19] Running /usr/bin/apptainer --version
[2026-03-31 14:38:19] apptainer version 1.4.5
[2026-03-31 14:38:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 14:38:19] X-32-ubuntu
[2026-03-31 14:38:19] apptainer works
[2026-03-31 14:38:19] Set ATHENA_PROC_NUMBER=4
[2026-03-31 14:38:19] Set ATHENA_CORE_NUMBER=4
[2026-03-31 14:38:19] Starting ATLAS job with PandaID=7073094861
[2026-03-31 14:38:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 16:04:48]  *** The last 200 lines of the pilot log: ***
[2026-03-31 16:04:48]  ddmendpoint_alt=None
[2026-03-31 16:04:48]  direct_access_lan=False
[2026-03-31 16:04:48]  direct_access_wan=False
[2026-03-31 16:04:48]  domain=
[2026-03-31 16:04:48]  filesize=260896
[2026-03-31 16:04:48]  filetype=log
[2026-03-31 16:04:48]  guid=b3c05502-5e99-46bc-a985-e624acf115fd
[2026-03-31 16:04:48]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-31 16:04:48]  is_altstaged=None
[2026-03-31 16:04:48]  is_tar=False
[2026-03-31 16:04:48]  lfn=log.49263208._014322.job.log.tgz.1
[2026-03-31 16:04:48]  mtime=0
[2026-03-31 16:04:48]  protocol_id=None
[2026-03-31 16:04:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-31 16:04:48]  replicas=None
[2026-03-31 16:04:48]  scope=mc23_13p6TeV
[2026-03-31 16:04:48]  status=None
[2026-03-31 16:04:48]  status_code=0
[2026-03-31 16:04:48]  storage_token=
[2026-03-31 16:04:48]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-7073094861/log.49263208._014322.job.log.tgz.1
[2026-03-31 16:04:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/c4/log.49263208._014322.job.log.tgz.1
[2026-03-31 16:04:48]  workdir=None
[2026-03-31 16:04:48] ]
[2026-03-31 16:04:48] 2026-03-31 20:03:48,504 | INFO     | transferring file log.49263208._014322.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-7073094861/log.49263208._014322.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-03-31 16:04:48] 2026-03-31 20:03:48,504 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-7073094861/log.49263208._014322.job.log.tgz.1 /var/lib/boinc/slots/3/log.49263208._014322.job
[2026-03-31 16:04:48] 2026-03-31 20:03:48,514 | INFO     | adding to output.list: log.49263208._014322.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/c4/log.49263208._014322.job.log.tg
[2026-03-31 16:04:48] 2026-03-31 20:03:48,515 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-31 16:04:48] 2026-03-31 20:03:48,515 | INFO     | summary of transferred files:
[2026-03-31 16:04:48] 2026-03-31 20:03:48,515 | INFO     |  -- lfn=log.49263208._014322.job.log.tgz.1, status_code=0, status=transferred
[2026-03-31 16:04:48] 2026-03-31 20:03:48,515 | INFO     | stage-out finished correctly
[2026-03-31 16:04:48] 2026-03-31 20:03:49,727 | INFO     | monitor loop #389: job 0:7073094861 is in state 'finished'
[2026-03-31 16:04:48] 2026-03-31 20:03:49,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-31 16:04:48] 2026-03-31 20:03:51,929 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-31 16:04:48] 2026-03-31 20:03:51,963 | INFO     | job 7073094861 has state=finished
[2026-03-31 16:04:48] 2026-03-31 20:03:51,963 | INFO     | preparing for final server update for job 7073094861 in state='finished'
[2026-03-31 16:04:48] 2026-03-31 20:03:51,963 | INFO     | reading metadata from: /var/lib/boinc/slots/3/PanDA_Pilot-7073094861/jobReport.json
[2026-03-31 16:04:48] 2026-03-31 20:03:51,964 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/3/workernode_map.json
[2026-03-31 16:04:48] 2026-03-31 20:03:51,964 | INFO     | this job has now completed (state=finished)
[2026-03-31 16:04:48] 2026-03-31 20:03:51,965 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 16:04:48] 2026-03-31 20:03:51,965 | INFO     | log transfer has been attempted: DONE
[2026-03-31 16:04:48] 2026-03-31 20:03:51,965 | INFO     | job 7073094861 has finished - writing final server update
[2026-03-31 16:04:48] 2026-03-31 20:03:51,965 | INFO     | total number of processed events: 400 (read)
[2026-03-31 16:04:48] 2026-03-31 20:03:51,967 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-7073094861/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 16:04:48] 2026-03-31 20:03:51,967 | INFO     | extracted standard info from prmon json
[2026-03-31 16:04:48] 2026-03-31 20:03:51,967 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 16:04:48] 2026-03-31 20:03:51,967 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 16:04:48] 2026-03-31 20:03:51,967 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 16:04:48] 2026-03-31 20:03:51,968 | INFO     | fitting pss+swap vs Time
[2026-03-31 16:04:48] 2026-03-31 20:03:51,968 | INFO     | sum of square deviations: 141539398.0
[2026-03-31 16:04:48] 2026-03-31 20:03:51,968 | INFO     | sum of deviations: -6342886933.0
[2026-03-31 16:04:48] 2026-03-31 20:03:51,968 | INFO     | mean x (centered): 0.0
[2026-03-31 16:04:48] 2026-03-31 20:03:51,968 | INFO     | mean y: 2386238.285714286
[2026-03-31 16:04:48] 2026-03-31 20:03:51,968 | INFO     | intersect: 2386238.285714286
[2026-03-31 16:04:48] 2026-03-31 20:03:51,968 | INFO     | chi2: 0.03285211088096616
[2026-03-31 16:04:48] 2026-03-31 20:03:51,968 | INFO     | current memory leak: -44.81 B/s (using 77 data points, chi2=0.03)
[2026-03-31 16:04:48] 2026-03-31 20:03:51,969 | INFO     | could have reported an average CPU frequency of 3917 MHz (6 samples)
[2026-03-31 16:04:48] 2026-03-31 20:03:51,969 | INFO     | ..............................
[2026-03-31 16:04:48] 2026-03-31 20:03:51,969 | INFO     | . Timing measurements:
[2026-03-31 16:04:48] 2026-03-31 20:03:51,969 | INFO     | . get job = 0 s
[2026-03-31 16:04:48] 2026-03-31 20:03:51,969 | INFO     | . initial setup = 5 s
[2026-03-31 16:04:48] 2026-03-31 20:03:51,969 | INFO     | . payload setup = 7 s
[2026-03-31 16:04:48] 2026-03-31 20:03:51,969 | INFO     | . stage-in = 0 s
[2026-03-31 16:04:48] 2026-03-31 20:03:51,969 | INFO     | . payload execution = 5090 s
[2026-03-31 16:04:48] 2026-03-31 20:03:51,969 | INFO     | . stage-out = 0 s
[2026-03-31 16:04:48] 2026-03-31 20:03:51,969 | INFO     | . log creation = 0 s
[2026-03-31 16:04:48] 2026-03-31 20:03:51,969 | INFO     | ..............................
[2026-03-31 16:04:48] 2026-03-31 20:03:52,031 | INFO     | 
[2026-03-31 16:04:48] 2026-03-31 20:03:52,031 | INFO     | job summary report
[2026-03-31 16:04:48] 2026-03-31 20:03:52,031 | INFO     | --------------------------------------------------
[2026-03-31 16:04:48] 2026-03-31 20:03:52,031 | INFO     | PanDA job id: 7073094861
[2026-03-31 16:04:48] 2026-03-31 20:03:52,031 | INFO     | task id: 49263208
[2026-03-31 16:04:48] 2026-03-31 20:03:52,031 | INFO     | errors: (none)
[2026-03-31 16:04:48] 2026-03-31 20:03:52,031 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 16:04:48] 2026-03-31 20:03:52,031 | INFO     | pilot state: finished 
[2026-03-31 16:04:48] 2026-03-31 20:03:52,031 | INFO     | transexitcode: 0
[2026-03-31 16:04:48] 2026-03-31 20:03:52,031 | INFO     | exeerrorcode: 0
[2026-03-31 16:04:48] 2026-03-31 20:03:52,031 | INFO     | exeerrordiag: 
[2026-03-31 16:04:48] 2026-03-31 20:03:52,031 | INFO     | exitcode: 0
[2026-03-31 16:04:48] 2026-03-31 20:03:52,031 | INFO     | exitmsg: OK
[2026-03-31 16:04:48] 2026-03-31 20:03:52,031 | INFO     | cpuconsumptiontime: 19502 s
[2026-03-31 16:04:48] 2026-03-31 20:03:52,032 | INFO     | nevents: 400
[2026-03-31 16:04:48] 2026-03-31 20:03:52,032 | INFO     | neventsw: 0
[2026-03-31 16:04:48] 2026-03-31 20:03:52,032 | INFO     | pid: 3492943
[2026-03-31 16:04:48] 2026-03-31 20:03:52,032 | INFO     | pgrp: 3492943
[2026-03-31 16:04:48] 2026-03-31 20:03:52,032 | INFO     | corecount: 4
[2026-03-31 16:04:48] 2026-03-31 20:03:52,032 | INFO     | event service: False
[2026-03-31 16:04:48] 2026-03-31 20:03:52,032 | INFO     | sizes: {0: 2281591, 11: 2281591, 5102: 2308028, 5103: 2317026, 5106: 2317276}
[2026-03-31 16:04:48] 2026-03-31 20:03:52,032 | INFO     | --------------------------------------------------
[2026-03-31 16:04:48] 2026-03-31 20:03:52,032 | INFO     | 
[2026-03-31 16:04:48] 2026-03-31 20:03:52,032 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-03-31 16:04:48] 2026-03-31 20:03:52,044 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,044 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,044 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,044 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,044 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,044 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,044 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,044 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,044 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,044 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,044 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,044 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,044 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,044 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,044 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,044 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,045 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,045 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 16:04:48] 2026-03-31 20:03:52,045 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,045 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 16:04:48] 2026-03-31 20:03:52,045 | INFO     | job 7073094861 has completed (purged errors)
[2026-03-31 16:04:48] 2026-03-31 20:03:52,045 | INFO     | overall cleanup function is called
[2026-03-31 16:04:48] 2026-03-31 20:03:53,052 | INFO     | --- collectZombieJob: --- 10, [3492943]
[2026-03-31 16:04:48] 2026-03-31 20:03:53,052 | INFO     | zombie collector waiting for pid 3492943
[2026-03-31 16:04:48] 2026-03-31 20:03:53,052 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 16:04:48] 2026-03-31 20:03:53,052 | INFO     | collected zombie processes
[2026-03-31 16:04:48] 2026-03-31 20:03:53,052 | INFO     | will attempt to kill all subprocesses of pid=3492943
[2026-03-31 16:04:48] 2026-03-31 20:03:53,132 | INFO     | process IDs to be killed: [3492943] (in reverse order)
[2026-03-31 16:04:48] 2026-03-31 20:03:53,165 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 16:04:48] 2026-03-31 20:03:53,165 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 16:04:48] 2026-03-31 20:03:53,167 | INFO     | did not find any defunct processes belonging to 3492943
[2026-03-31 16:04:48] 2026-03-31 20:03:53,169 | INFO     | did not find any defunct processes belonging to 3492943
[2026-03-31 16:04:48] 2026-03-31 20:03:53,169 | INFO     | Ready for new job
[2026-03-31 16:04:48] 2026-03-31 20:03:53,170 | INFO     | **************************************
[2026-03-31 16:04:48] 2026-03-31 20:03:53,170 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 16:04:48] 2026-03-31 20:03:53,170 | INFO     | **************************************
[2026-03-31 16:04:48] 2026-03-31 20:03:53,170 | INFO     | 
[2026-03-31 16:04:48] 2026-03-31 20:03:53,171 | INFO     | architecture information:
[2026-03-31 16:04:48] 2026-03-31 20:03:53,171 | INFO     | executing command: cat /etc/os-release
[2026-03-31 16:04:48] 2026-03-31 20:03:53,178 | INFO     | cat /etc/os-release:
[2026-03-31 16:04:48] NAME="CentOS Linux"
[2026-03-31 16:04:48] VERSION="7 (Core)"
[2026-03-31 16:04:48] ID="centos"
[2026-03-31 16:04:48] ID_LIKE="rhel fedora"
[2026-03-31 16:04:48] VERSION_ID="7"
[2026-03-31 16:04:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 16:04:48] ANSI_COLOR="0;31"
[2026-03-31 16:04:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 16:04:48] HOME_URL="https://www.centos.org/"
[2026-03-31 16:04:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 16:04:48] 
[2026-03-31 16:04:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 16:04:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 16:04:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 16:04:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 16:04:48] 
[2026-03-31 16:04:48] 2026-03-31 20:03:53,178 | INFO     | **************************************
[2026-03-31 16:04:48] 2026-03-31 20:03:53,681 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-03-31 16:04:48] 2026-03-31 20:03:53,689 | INFO     | sufficient remaining disk space (1805330153472 B)
[2026-03-31 16:04:48] 2026-03-31 20:03:53,689 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 16:04:48] 2026-03-31 20:03:53,690 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 16:04:48] 2026-03-31 20:03:53,690 | INFO     | update_server=False
[2026-03-31 16:04:48] 2026-03-31 20:03:53,690 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 16:04:48] 2026-03-31 20:03:53,690 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 16:04:48] 2026-03-31 20:03:53,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 16:04:48] 2026-03-31 20:03:53,690 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 16:04:48] 2026-03-31 20:03:53,690 | INFO     | aborting loop
[2026-03-31 16:04:48] 2026-03-31 20:03:53,894 | INFO     | all payload control threads have been joined
[2026-03-31 16:04:48] 2026-03-31 20:03:54,051 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 16:04:48] 2026-03-31 20:03:54,429 | INFO     | all data control threads have been joined
[2026-03-31 16:04:48] 2026-03-31 20:03:54,695 | INFO     | [job] retrieve thread has finished
[2026-03-31 16:04:48] 2026-03-31 20:03:54,695 | INFO     | [job] queue monitor thread has finished
[2026-03-31 16:04:48] 2026-03-31 20:03:54,696 | INFO     | [job] job monitor thread has finished
[2026-03-31 16:04:48] 2026-03-31 20:03:54,701 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 16:04:48] 2026-03-31 20:03:54,804 | INFO     | all job control threads have been joined
[2026-03-31 16:04:48] 2026-03-31 20:03:54,814 | INFO     | [payload] validate_post thread has finished
[2026-03-31 16:04:48] 2026-03-31 20:03:54,899 | INFO     | [payload] control thread has finished
[2026-03-31 16:04:48] 2026-03-31 20:03:54,936 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 16:04:48] 2026-03-31 20:03:55,168 | INFO     | [data] copytool_in thread has finished
[2026-03-31 16:04:48] 2026-03-31 20:03:55,434 | INFO     | [data] control thread has finished
[2026-03-31 16:04:48] 2026-03-31 20:03:55,571 | INFO     | [payload] failed_post thread has finished
[2026-03-31 16:04:48] 2026-03-31 20:03:55,809 | INFO     | [job] control thread has finished
[2026-03-31 16:04:48] 2026-03-31 20:03:55,884 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 16:04:48] 2026-03-31 20:03:55,909 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 16:04:48] 2026-03-31 20:03:56,056 | INFO     | [data] copytool_out thread has finished
[2026-03-31 16:04:48] 2026-03-31 20:03:56,172 | INFO     | [job] validate thread has finished
[2026-03-31 16:04:48] 2026-03-31 20:03:57,695 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 16:04:48] 2026-03-31 20:04:24,429 | INFO     | PID=3488377 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-31 16:04:48] 2026-03-31 20:04:24,429 | INFO     | .. there are 3 such processes running
[2026-03-31 16:04:48] 2026-03-31 20:04:24,429 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 16:04:48] 2026-03-31 20:04:24,429 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 16:04:48] 2026-03-31 20:04:24,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 16:04:48] 2026-03-31 20:04:41,791 | INFO     | [monitor] cgroup control has ended
[2026-03-31 16:04:48] 2026-03-31 20:04:42,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127489996568384)>', '<ExcThread(monitor, started 127489502332672)>']
[2026-03-31 16:04:48] 2026-03-31 20:04:43,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 16:04:48] 2026-03-31 20:04:43,524 | INFO     | [monitor] control thread has ended
[2026-03-31 16:04:48] 2026-03-31 20:04:47,948 | INFO     | all workflow threads have been joined
[2026-03-31 16:04:48] 2026-03-31 20:04:47,948 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 16:04:48] 2026-03-31 20:04:47,948 | INFO     | traces error code: 0
[2026-03-31 16:04:48] 2026-03-31 20:04:47,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 16:04:48] 2026-03-31 20:04:47,996 [wrapper] ==== pilot stdout END ====
[2026-03-31 16:04:48] 2026-03-31 20:04:47,998 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 16:04:48] 2026-03-31 20:04:47,999 [wrapper] pilotpid: 3488377
[2026-03-31 16:04:48] 2026-03-31 20:04:48,001 [wrapper] Pilot exit status: 0
[2026-03-31 16:04:48] 2026-03-31 20:04:48,005 [wrapper] pandaids: 7073094861
[2026-03-31 16:04:48] 2026-03-31 20:04:48,027 [wrapper] cleanup supervisor_pilot 3529584 3488378
[2026-03-31 16:04:48] 2026-03-31 20:04:48,029 [wrapper] Test setup, not cleaning
[2026-03-31 16:04:48] 2026-03-31 20:04:48,030 [wrapper] apfmon messages muted
[2026-03-31 16:04:48] 2026-03-31 20:04:48,031 [wrapper] ==== wrapper stdout END ====
[2026-03-31 16:04:48] 2026-03-31 20:04:48,033 [wrapper] ==== wrapper stderr END ====
[2026-03-31 16:04:48]  *** Error codes and diagnostics ***
[2026-03-31 16:04:48]     "exeErrorCode": 0,
[2026-03-31 16:04:48]     "pilotErrorCode": 0,
[2026-03-31 16:04:48]  *** Listing of results directory ***
[2026-03-31 16:04:48] total 412644
[2026-03-31 16:04:48] -rw-r--r-- 1 boinc boinc    644034 Mar 31 04:26 pilot3.tar.gz
[2026-03-31 16:04:48] -rwx------ 1 boinc boinc     36322 Mar 31 04:28 runpilot2-wrapper.sh
[2026-03-31 16:04:48] -rw-r--r-- 1 boinc boinc      5118 Mar 31 04:28 queuedata.json
[2026-03-31 16:04:48] -rw-r--r-- 1 boinc boinc       100 Mar 31 14:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 16:04:48] -rwxr-xr-x 1 boinc boinc      7986 Mar 31 14:38 run_atlas
[2026-03-31 16:04:48] -rw-r--r-- 1 boinc boinc       105 Mar 31 14:38 job.xml
[2026-03-31 16:04:48] -rw-r--r-- 1 boinc boinc      9669 Mar 31 14:38 init_data.xml
[2026-03-31 16:04:48] -rw-r--r-- 2 boinc boinc 223713332 Mar 31 14:38 EVNT.49263206._000622.pool.root.1
[2026-03-31 16:04:48] -rw-r--r-- 2 boinc boinc     15845 Mar 31 14:38 start_atlas.sh
[2026-03-31 16:04:48] drwxrwx--x 2 boinc boinc      4096 Mar 31 14:38 shared
[2026-03-31 16:04:48] -rw-r--r-- 2 boinc boinc    656754 Mar 31 14:38 input.tar.gz
[2026-03-31 16:04:48] -rw-r--r-- 1 boinc boinc         0 Mar 31 14:38 boinc_lockfile
[2026-03-31 16:04:48] -rw-r--r-- 1 boinc boinc      2575 Mar 31 14:38 pandaJob.out
[2026-03-31 16:04:48] -rw------- 1 boinc boinc   1005006 Mar 31 14:38 agis_schedconf.cvmfs.json
[2026-03-31 16:04:48] -rw------- 1 boinc boinc   1511579 Mar 31 14:38 agis_ddmendpoints.agis.ALL.json
[2026-03-31 16:04:48] -rw------- 1 boinc boinc       426 Mar 31 14:38 workernode_map.json
[2026-03-31 16:04:48] drwx------ 5 boinc boinc      4096 Mar 31 14:38 pilot3
[2026-03-31 16:04:48] -rw------- 1 boinc boinc 193224004 Mar 31 16:03 HITS.49263208._014322.pool.root.1
[2026-03-31 16:04:48] -rw------- 1 boinc boinc        95 Mar 31 16:03 pilot_heartbeat.json
[2026-03-31 16:04:48] -rw------- 1 boinc boinc      1022 Mar 31 16:03 memory_monitor_summary.json
[2026-03-31 16:04:48] -rw------- 1 boinc boinc    260896 Mar 31 16:03 log.49263208._014322.job.log.tgz.1
[2026-03-31 16:04:48] -rw------- 1 boinc boinc      6313 Mar 31 16:03 heartbeat_new.json
[2026-03-31 16:04:48] -rw------- 1 boinc boinc      6204 Mar 31 16:03 heartbeat.json
[2026-03-31 16:04:48] -rw-r--r-- 1 boinc boinc       529 Mar 31 16:03 boinc_task_state.xml
[2026-03-31 16:04:48] -rw-r--r-- 1 boinc boinc        27 Mar 31 16:04 wrapper_checkpoint.txt
[2026-03-31 16:04:48] -rw-r--r-- 1 boinc boinc      8192 Mar 31 16:04 boinc_mmap_file
[2026-03-31 16:04:48] -rw------- 1 boinc boinc      4820 Mar 31 16:04 pilotlog.txt
[2026-03-31 16:04:48] -rw------- 1 boinc boinc    507620 Mar 31 16:04 log.49263208._014322.job.log.1
[2026-03-31 16:04:48] -rw------- 1 boinc boinc       357 Mar 31 16:04 output.list
[2026-03-31 16:04:48] -rw-r--r-- 1 boinc boinc       620 Mar 31 16:04 runtime_log
[2026-03-31 16:04:48] -rw------- 1 boinc boinc    788480 Mar 31 16:04 result.tar.gz
[2026-03-31 16:04:48] -rw-r--r-- 1 boinc boinc      8784 Mar 31 16:04 runtime_log.err
[2026-03-31 16:04:48] -rw------- 1 boinc boinc       644 Mar 31 16:04 5XTLDmMdjR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmETSKDmkqjR2m.diag
[2026-03-31 16:04:48] -rw-r--r-- 1 boinc boinc     20856 Mar 31 16:04 stderr.txt
[2026-03-31 16:04:48] HITS file was successfully produced:
[2026-03-31 16:04:48] -rw------- 1 boinc boinc 193224004 Mar 31 16:03 shared/HITS.pool.root.1
[2026-03-31 16:04:48]  *** Contents of shared directory: ***
[2026-03-31 16:04:48] total 408608
[2026-03-31 16:04:48] -rw-r--r-- 2 boinc boinc 223713332 Mar 31 14:38 ATLAS.root_0
[2026-03-31 16:04:48] -rw-r--r-- 2 boinc boinc     15845 Mar 31 14:38 start_atlas.sh
[2026-03-31 16:04:48] -rw-r--r-- 2 boinc boinc    656754 Mar 31 14:38 input.tar.gz
[2026-03-31 16:04:48] -rw------- 1 boinc boinc 193224004 Mar 31 16:03 HITS.pool.root.1
[2026-03-31 16:04:48] -rw------- 1 boinc boinc    788480 Mar 31 16:04 result.tar.gz
16:04:49 (3484192): run_atlas exited; CPU time 19565.161551
16:04:49 (3484192): called boinc_finish(0)

</stderr_txt>
]]>

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