Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:15:40 (3961588): wrapper (7.7.26015): starting
19:15:40 (3961588): wrapper: running run_atlas (--nthreads 12)
[2026-04-05 19:15:40] Arguments: --nthreads 12
[2026-04-05 19:15:40] Threads: 12
[2026-04-05 19:15:40] Checking for CVMFS
[2026-04-05 19:15:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-05 19:15:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-05 19:15:40] Running cvmfs_config stat atlas.cern.ch
[2026-04-05 19:15:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-05 19:15:41] 2.13.3.0 3021178 16602 74944 158121 1 188 2099508 4096000 6736 130560 0 82532856 99.987 990300 2202 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-05 19:15:41] CVMFS is ok
[2026-04-05 19:15:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 19:15:41] Checking for apptainer binary...
[2026-04-05 19:15:41] apptainer is not installed, using version from CVMFS
[2026-04-05 19:15:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 19:15:42] epyc7v12
[2026-04-05 19:15:42] apptainer works
[2026-04-05 19:15:42] Set ATHENA_PROC_NUMBER=12
[2026-04-05 19:15:42] Set ATHENA_CORE_NUMBER=12
[2026-04-05 19:15:42] Starting ATLAS job with PandaID=7073093575
[2026-04-05 19:15:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31428/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-05 20:09:19]  *** The last 200 lines of the pilot log: ***
[2026-04-05 20:09:19]  filetype=log
[2026-04-05 20:09:19]  guid=a8762720-af33-4807-8601-f40f319d0fdf
[2026-04-05 20:09:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-05 20:09:19]  is_altstaged=None
[2026-04-05 20:09:19]  is_tar=False
[2026-04-05 20:09:19]  lfn=log.49263208._013731.job.log.tgz.1
[2026-04-05 20:09:19]  mtime=0
[2026-04-05 20:09:19]  protocol_id=None
[2026-04-05 20:09:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-05 20:09:19]  replicas=None
[2026-04-05 20:09:19]  scope=mc23_13p6TeV
[2026-04-05 20:09:19]  status=None
[2026-04-05 20:09:19]  status_code=0
[2026-04-05 20:09:19]  storage_token=
[2026-04-05 20:09:19]  surl=/opt/boinc/instance_homes/boinc_31428/slots/0/PanDA_Pilot-7073093575/log.49263208._013731.job.log.tgz.1
[2026-04-05 20:09:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/84/log.49263208._013731.job.log.tgz.1
[2026-04-05 20:09:19]  workdir=None
[2026-04-05 20:09:19] ]
[2026-04-05 20:09:19] 2026-04-05 20:08:31,788 | INFO     | transferring file log.49263208._013731.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31428/slots/0/PanDA_Pilot-7073093575/log.49263208._013731.job.log.tgz.1 t
[2026-04-05 20:09:19] 2026-04-05 20:08:31,788 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31428/slots/0/PanDA_Pilot-7073093575/log.49263208._013731.job.log.tgz.1 /opt/boinc/instance_home
[2026-04-05 20:09:19] 2026-04-05 20:08:31,808 | INFO     | adding to output.list: log.49263208._013731.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/84/log.49263208._013731.job.log.tg
[2026-04-05 20:09:19] 2026-04-05 20:08:31,809 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-05 20:09:19] 2026-04-05 20:08:31,809 | INFO     | summary of transferred files:
[2026-04-05 20:09:19] 2026-04-05 20:08:31,809 | INFO     |  -- lfn=log.49263208._013731.job.log.tgz.1, status_code=0, status=transferred
[2026-04-05 20:09:19] 2026-04-05 20:08:31,810 | INFO     | stage-out finished correctly
[2026-04-05 20:09:19] 2026-04-05 20:08:34,429 | INFO     | PID=3965942 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-05 20:09:19] 2026-04-05 20:08:34,429 | INFO     | .. there are 7 such processes running
[2026-04-05 20:09:19] 2026-04-05 20:08:34,763 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-05 20:09:19] 2026-04-05 20:08:36,457 | INFO     | job 7073093575 has state=finished
[2026-04-05 20:09:19] 2026-04-05 20:08:36,458 | INFO     | preparing for final server update for job 7073093575 in state='finished'
[2026-04-05 20:09:19] 2026-04-05 20:08:36,458 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31428/slots/0/PanDA_Pilot-7073093575/jobReport.json
[2026-04-05 20:09:19] 2026-04-05 20:08:36,460 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31428/slots/0/workernode_map.json
[2026-04-05 20:09:19] 2026-04-05 20:08:36,461 | INFO     | this job has now completed (state=finished)
[2026-04-05 20:09:19] 2026-04-05 20:08:36,461 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-05 20:09:19] 2026-04-05 20:08:36,461 | INFO     | log transfer has been attempted: DONE
[2026-04-05 20:09:19] 2026-04-05 20:08:36,461 | INFO     | job 7073093575 has finished - writing final server update
[2026-04-05 20:09:19] 2026-04-05 20:08:36,461 | INFO     | total number of processed events: 400 (read)
[2026-04-05 20:09:19] 2026-04-05 20:08:36,488 | INFO     | using path: /opt/boinc/instance_homes/boinc_31428/slots/0/PanDA_Pilot-7073093575/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 20:09:19] 2026-04-05 20:08:36,489 | INFO     | extracted standard info from prmon json
[2026-04-05 20:09:19] 2026-04-05 20:08:36,489 | INFO     | extracted standard memory fields from prmon json
[2026-04-05 20:09:19] 2026-04-05 20:08:36,489 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-05 20:09:19] 2026-04-05 20:08:36,489 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-05 20:09:19] 2026-04-05 20:08:36,490 | INFO     | fitting pss+swap vs Time
[2026-04-05 20:09:19] 2026-04-05 20:08:36,491 | INFO     | sum of square deviations: 26400495.0
[2026-04-05 20:09:19] 2026-04-05 20:08:36,491 | INFO     | sum of deviations: 521444896.99999994
[2026-04-05 20:09:19] 2026-04-05 20:08:36,491 | INFO     | mean x (centered): 0.0
[2026-04-05 20:09:19] 2026-04-05 20:08:36,491 | INFO     | mean y: 2724344.409090909
[2026-04-05 20:09:19] 2026-04-05 20:08:36,492 | INFO     | intersect: 2724344.409090909
[2026-04-05 20:09:19] 2026-04-05 20:08:36,492 | INFO     | chi2: 0.0009576987731144559
[2026-04-05 20:09:19] 2026-04-05 20:08:36,492 | INFO     | current memory leak: 19.75 B/s (using 44 data points, chi2=0.00)
[2026-04-05 20:09:19] 2026-04-05 20:08:36,492 | INFO     | could have reported an average CPU frequency of 2371 MHz (5 samples)
[2026-04-05 20:09:19] 2026-04-05 20:08:36,492 | INFO     | ..............................
[2026-04-05 20:09:19] 2026-04-05 20:08:36,493 | INFO     | . Timing measurements:
[2026-04-05 20:09:19] 2026-04-05 20:08:36,493 | INFO     | . get job = 0 s
[2026-04-05 20:09:19] 2026-04-05 20:08:36,493 | INFO     | . initial setup = 11 s
[2026-04-05 20:09:19] 2026-04-05 20:08:36,493 | INFO     | . payload setup = 13 s
[2026-04-05 20:09:19] 2026-04-05 20:08:36,493 | INFO     | . stage-in = 0 s
[2026-04-05 20:09:19] 2026-04-05 20:08:36,493 | INFO     | . payload execution = 3113 s
[2026-04-05 20:09:19] 2026-04-05 20:08:36,493 | INFO     | . stage-out = 0 s
[2026-04-05 20:09:19] 2026-04-05 20:08:36,493 | INFO     | . log creation = 0 s
[2026-04-05 20:09:19] 2026-04-05 20:08:36,493 | INFO     | ..............................
[2026-04-05 20:09:19] 2026-04-05 20:08:36,582 | INFO     | 
[2026-04-05 20:09:19] 2026-04-05 20:08:36,582 | INFO     | job summary report
[2026-04-05 20:09:19] 2026-04-05 20:08:36,582 | INFO     | --------------------------------------------------
[2026-04-05 20:09:19] 2026-04-05 20:08:36,582 | INFO     | PanDA job id: 7073093575
[2026-04-05 20:09:19] 2026-04-05 20:08:36,582 | INFO     | task id: 49263208
[2026-04-05 20:09:19] 2026-04-05 20:08:36,583 | INFO     | errors: (none)
[2026-04-05 20:09:19] 2026-04-05 20:08:36,583 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-05 20:09:19] 2026-04-05 20:08:36,583 | INFO     | pilot state: finished 
[2026-04-05 20:09:19] 2026-04-05 20:08:36,583 | INFO     | transexitcode: 0
[2026-04-05 20:09:19] 2026-04-05 20:08:36,583 | INFO     | exeerrorcode: 0
[2026-04-05 20:09:19] 2026-04-05 20:08:36,583 | INFO     | exeerrordiag: 
[2026-04-05 20:09:19] 2026-04-05 20:08:36,583 | INFO     | exitcode: 0
[2026-04-05 20:09:19] 2026-04-05 20:08:36,583 | INFO     | exitmsg: OK
[2026-04-05 20:09:19] 2026-04-05 20:08:36,584 | INFO     | cpuconsumptiontime: 33122 s
[2026-04-05 20:09:19] 2026-04-05 20:08:36,584 | INFO     | nevents: 400
[2026-04-05 20:09:19] 2026-04-05 20:08:36,584 | INFO     | neventsw: 0
[2026-04-05 20:09:19] 2026-04-05 20:08:36,584 | INFO     | pid: 3970958
[2026-04-05 20:09:19] 2026-04-05 20:08:36,584 | INFO     | pgrp: 3970958
[2026-04-05 20:09:19] 2026-04-05 20:08:36,584 | INFO     | corecount: 12
[2026-04-05 20:09:19] 2026-04-05 20:08:36,584 | INFO     | event service: False
[2026-04-05 20:09:19] 2026-04-05 20:08:36,584 | INFO     | sizes: {0: 2279984, 1: 2281614, 11: 2281642, 3130: 2307065, 3131: 2316109, 3134: 2316165, 3135: 2316519}
[2026-04-05 20:09:19] 2026-04-05 20:08:36,585 | INFO     | --------------------------------------------------
[2026-04-05 20:09:19] 2026-04-05 20:08:36,585 | INFO     | 
[2026-04-05 20:09:19] 2026-04-05 20:08:36,585 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31428/slots/0
[2026-04-05 20:09:19] 2026-04-05 20:08:36,607 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,607 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,607 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,607 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,608 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,608 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,608 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,608 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,608 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,608 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,608 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,608 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,608 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-05 20:09:19] 2026-04-05 20:08:36,608 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,608 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-05 20:09:19] 2026-04-05 20:08:36,609 | INFO     | job 7073093575 has completed (purged errors)
[2026-04-05 20:09:19] 2026-04-05 20:08:36,609 | INFO     | overall cleanup function is called
[2026-04-05 20:09:19] 2026-04-05 20:08:36,728 | WARNING  | process 3970958 can no longer be monitored (due to stat problems) - aborting
[2026-04-05 20:09:19] 2026-04-05 20:08:36,946 | INFO     | using path: /opt/boinc/instance_homes/boinc_31428/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 20:09:19] 2026-04-05 20:08:37,235 | INFO     | number of running child processes to parent process 3970958: 1
[2026-04-05 20:09:19] 2026-04-05 20:08:37,235 | INFO     | maximum number of monitored processes: 6
[2026-04-05 20:09:19] 2026-04-05 20:08:37,235 | INFO     | aborting job monitoring since job object (job id=7073093575) has expired
[2026-04-05 20:09:19] 2026-04-05 20:08:37,618 | INFO     | --- collectZombieJob: --- 10, [3970958]
[2026-04-05 20:09:19] 2026-04-05 20:08:37,618 | INFO     | zombie collector waiting for pid 3970958
[2026-04-05 20:09:19] 2026-04-05 20:08:37,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-05 20:09:19] 2026-04-05 20:08:37,618 | INFO     | collected zombie processes
[2026-04-05 20:09:19] 2026-04-05 20:08:37,618 | INFO     | will attempt to kill all subprocesses of pid=3970958
[2026-04-05 20:09:19] 2026-04-05 20:08:37,905 | INFO     | process IDs to be killed: [3970958] (in reverse order)
[2026-04-05 20:09:19] 2026-04-05 20:08:38,033 | WARNING  | found no corresponding commands to process id(s)
[2026-04-05 20:09:19] 2026-04-05 20:08:38,033 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-05 20:09:19] 2026-04-05 20:08:38,043 | INFO     | did not find any defunct processes belonging to 3970958
[2026-04-05 20:09:19] 2026-04-05 20:08:38,053 | INFO     | did not find any defunct processes belonging to 3970958
[2026-04-05 20:09:19] 2026-04-05 20:08:38,053 | INFO     | Ready for new job
[2026-04-05 20:09:19] 2026-04-05 20:08:38,054 | INFO     | **************************************
[2026-04-05 20:09:19] 2026-04-05 20:08:38,054 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-05 20:09:19] 2026-04-05 20:08:38,054 | INFO     | **************************************
[2026-04-05 20:09:19] 2026-04-05 20:08:38,054 | INFO     | 
[2026-04-05 20:09:19] 2026-04-05 20:08:38,061 | INFO     | architecture information:
[2026-04-05 20:09:19] 2026-04-05 20:08:38,061 | INFO     | executing command: cat /etc/os-release
[2026-04-05 20:09:19] 2026-04-05 20:08:38,079 | INFO     | cat /etc/os-release:
[2026-04-05 20:09:19] NAME="CentOS Linux"
[2026-04-05 20:09:19] VERSION="7 (Core)"
[2026-04-05 20:09:19] ID="centos"
[2026-04-05 20:09:19] ID_LIKE="rhel fedora"
[2026-04-05 20:09:19] VERSION_ID="7"
[2026-04-05 20:09:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-05 20:09:19] ANSI_COLOR="0;31"
[2026-04-05 20:09:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-05 20:09:19] HOME_URL="https://www.centos.org/"
[2026-04-05 20:09:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-05 20:09:19] 
[2026-04-05 20:09:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-05 20:09:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-05 20:09:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-05 20:09:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-05 20:09:19] 
[2026-04-05 20:09:19] 2026-04-05 20:08:38,080 | INFO     | **************************************
[2026-04-05 20:09:19] 2026-04-05 20:08:38,583 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31428/slots/0
[2026-04-05 20:09:19] 2026-04-05 20:08:38,600 | INFO     | sufficient remaining disk space (418759311360 B)
[2026-04-05 20:09:19] 2026-04-05 20:08:38,600 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-05 20:09:19] 2026-04-05 20:08:38,600 | INFO     | current server update state: UPDATING_FINAL
[2026-04-05 20:09:19] 2026-04-05 20:08:38,600 | INFO     | update_server=False
[2026-04-05 20:09:19] 2026-04-05 20:08:38,600 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-05 20:09:19] 2026-04-05 20:08:38,601 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-05 20:09:19] 2026-04-05 20:08:38,601 | INFO     | aborting loop
[2026-04-05 20:09:19] 2026-04-05 20:08:38,800 | INFO     | all data control threads have been joined
[2026-04-05 20:09:19] 2026-04-05 20:08:39,181 | INFO     | all payload control threads have been joined
[2026-04-05 20:09:19] 2026-04-05 20:08:39,606 | INFO     | [job] retrieve thread has finished
[2026-04-05 20:09:19] 2026-04-05 20:08:39,606 | INFO     | [job] job monitor thread has finished
[2026-04-05 20:09:19] 2026-04-05 20:08:39,802 | INFO     | [data] control thread has finished
[2026-04-05 20:09:19] 2026-04-05 20:08:39,808 | INFO     | [payload] validate_post thread has finished
[2026-04-05 20:09:19] 2026-04-05 20:08:39,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-05 20:09:19] 2026-04-05 20:08:40,007 | INFO     | all job control threads have been joined
[2026-04-05 20:09:19] 2026-04-05 20:08:40,077 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-05 20:09:19] 2026-04-05 20:08:40,121 | INFO     | [job] validate thread has finished
[2026-04-05 20:09:19] 2026-04-05 20:08:40,155 | INFO     | [payload] failed_post thread has finished
[2026-04-05 20:09:19] 2026-04-05 20:08:40,186 | INFO     | [payload] control thread has finished
[2026-04-05 20:09:19] 2026-04-05 20:08:40,479 | INFO     | [job] create_data_payload thread has finished
[2026-04-05 20:09:19] 2026-04-05 20:08:40,629 | INFO     | [payload] validate_pre thread has finished
[2026-04-05 20:09:19] 2026-04-05 20:08:40,740 | INFO     | [payload] execute_payloads thread has finished
[2026-04-05 20:09:19] 2026-04-05 20:08:40,826 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-05 20:09:19] 2026-04-05 20:08:40,970 | INFO     | [data] copytool_in thread has finished
[2026-04-05 20:09:19] 2026-04-05 20:08:41,013 | INFO     | [job] control thread has finished
[2026-04-05 20:09:19] 2026-04-05 20:08:41,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-05 20:09:19] 2026-04-05 20:08:41,891 | INFO     | [data] copytool_out thread has finished
[2026-04-05 20:09:19] 2026-04-05 20:08:42,600 | INFO     | [job] queue monitor thread has finished
[2026-04-05 20:09:19] 2026-04-05 20:08:44,832 | INFO     | [data] queue_monitor thread has finished
[2026-04-05 20:09:19] 2026-04-05 20:09:08,889 | INFO     | PID=3965942 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-05 20:09:19] 2026-04-05 20:09:08,889 | INFO     | .. there are 7 such processes running
[2026-04-05 20:09:19] 2026-04-05 20:09:08,889 | INFO     | found 0 job(s) in 20 queues
[2026-04-05 20:09:19] 2026-04-05 20:09:08,889 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-05 20:09:19] 2026-04-05 20:09:08,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-05 20:09:19] 2026-04-05 20:09:13,516 | INFO     | [monitor] cgroup control has ended
[2026-04-05 20:09:19] 2026-04-05 20:09:14,166 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139944055326528)>', '<ExcThread(monitor, started 139943389165312)>']
[2026-04-05 20:09:19] 2026-04-05 20:09:14,920 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-05 20:09:19] 2026-04-05 20:09:14,920 | INFO     | [monitor] control thread has ended
[2026-04-05 20:09:19] 2026-04-05 20:09:19,192 | INFO     | all workflow threads have been joined
[2026-04-05 20:09:19] 2026-04-05 20:09:19,192 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-05 20:09:19] 2026-04-05 20:09:19,192 | INFO     | traces error code: 0
[2026-04-05 20:09:19] 2026-04-05 20:09:19,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-05 20:09:19] 2026-04-05 20:09:19,325 [wrapper] ==== pilot stdout END ====
[2026-04-05 20:09:19] 2026-04-05 20:09:19,329 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-05 20:09:19] 2026-04-05 20:09:19,332 [wrapper] pilotpid: 3965942
[2026-04-05 20:09:19] 2026-04-05 20:09:19,336 [wrapper] Pilot exit status: 0
[2026-04-05 20:09:19] 2026-04-05 20:09:19,351 [wrapper] pandaids: 7073093575
[2026-04-05 20:09:19] 2026-04-05 20:09:19,440 [wrapper] cleanup supervisor_pilot 4005538 3965943
[2026-04-05 20:09:19] 2026-04-05 20:09:19,445 [wrapper] Test setup, not cleaning
[2026-04-05 20:09:19] 2026-04-05 20:09:19,449 [wrapper] apfmon messages muted
[2026-04-05 20:09:19] 2026-04-05 20:09:19,453 [wrapper] ==== wrapper stdout END ====
[2026-04-05 20:09:19] 2026-04-05 20:09:19,457 [wrapper] ==== wrapper stderr END ====
[2026-04-05 20:09:19]  *** Error codes and diagnostics ***
[2026-04-05 20:09:19]     "exeErrorCode": 0,
[2026-04-05 20:09:19]     "pilotErrorCode": 0,
[2026-04-05 20:09:19]  *** Listing of results directory ***
[2026-04-05 20:09:19] total 421696
[2026-04-05 20:09:19] -rw-r--r-- 1 boinc boinc      5118 Mar 31 08:26 queuedata.json
[2026-04-05 20:09:19] -rw-r--r-- 1 boinc boinc    644034 Mar 31 08:26 pilot3.tar.gz
[2026-04-05 20:09:19] -rwx------ 1 boinc boinc     36322 Mar 31 08:27 runpilot2-wrapper.sh
[2026-04-05 20:09:19] -rw-rw-r-- 1 boinc boinc       100 Apr  5 19:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-05 20:09:19] -rwxr-xr-x 1 boinc boinc      7986 Apr  5 19:15 run_atlas
[2026-04-05 20:09:19] -rw-rw-r-- 1 boinc boinc       105 Apr  5 19:15 job.xml
[2026-04-05 20:09:19] -rw-r--r-- 2 boinc boinc 226650242 Apr  5 19:15 EVNT.49263206._000599.pool.root.1
[2026-04-05 20:09:19] -rw-r--r-- 2 boinc boinc     15845 Apr  5 19:15 start_atlas.sh
[2026-04-05 20:09:19] drwxrwx--x 2 boinc boinc      4096 Apr  5 19:15 shared
[2026-04-05 20:09:19] -rw-r--r-- 2 boinc boinc    656749 Apr  5 19:15 input.tar.gz
[2026-04-05 20:09:19] -rw-rw-r-- 1 boinc boinc      6555 Apr  5 19:15 init_data.xml
[2026-04-05 20:09:19] -rw-rw-r-- 1 boinc boinc         0 Apr  5 19:15 boinc_setup_complete
[2026-04-05 20:09:19] -rw-rw-r-- 1 boinc boinc         0 Apr  5 19:15 boinc_lockfile
[2026-04-05 20:09:19] -rw-rw-r-- 1 boinc boinc      2575 Apr  5 19:15 pandaJob.out
[2026-04-05 20:09:19] -rw------- 1 boinc boinc   1005096 Apr  5 19:15 agis_schedconf.cvmfs.json
[2026-04-05 20:09:19] -rw------- 1 boinc boinc   1511579 Apr  5 19:16 agis_ddmendpoints.agis.ALL.json
[2026-04-05 20:09:19] -rw------- 1 boinc boinc       420 Apr  5 19:16 workernode_map.json
[2026-04-05 20:09:19] drwx------ 5 boinc boinc      4096 Apr  5 19:16 pilot3
[2026-04-05 20:09:19] -rw------- 1 boinc boinc 199743799 Apr  5 20:08 HITS.49263208._013731.pool.root.1
[2026-04-05 20:09:19] -rw-rw-r-- 1 boinc boinc       529 Apr  5 20:08 boinc_task_state.xml
[2026-04-05 20:09:19] -rw------- 1 boinc boinc        95 Apr  5 20:08 pilot_heartbeat.json
[2026-04-05 20:09:19] -rw------- 1 boinc boinc      1019 Apr  5 20:08 memory_monitor_summary.json
[2026-04-05 20:09:19] -rw------- 1 boinc boinc    342223 Apr  5 20:08 log.49263208._013731.job.log.tgz.1
[2026-04-05 20:09:19] -rw------- 1 boinc boinc      6297 Apr  5 20:08 heartbeat_new.json
[2026-04-05 20:09:19] -rw------- 1 boinc boinc      6188 Apr  5 20:08 heartbeat.json
[2026-04-05 20:09:19] -rw-rw-r-- 1 boinc boinc      8192 Apr  5 20:09 boinc_mmap_file
[2026-04-05 20:09:19] -rw-rw-r-- 1 boinc boinc        27 Apr  5 20:09 wrapper_checkpoint.txt
[2026-04-05 20:09:19] -rw------- 1 boinc boinc      4842 Apr  5 20:09 pilotlog.txt
[2026-04-05 20:09:19] -rw------- 1 boinc boinc    332882 Apr  5 20:09 log.49263208._013731.job.log.1
[2026-04-05 20:09:19] -rw------- 1 boinc boinc       357 Apr  5 20:09 output.list
[2026-04-05 20:09:19] -rw-rw-r-- 1 boinc boinc       620 Apr  5 20:09 runtime_log
[2026-04-05 20:09:19] -rw------- 1 boinc boinc    696320 Apr  5 20:09 result.tar.gz
[2026-04-05 20:09:19] -rw-rw-r-- 1 boinc boinc      9166 Apr  5 20:09 runtime_log.err
[2026-04-05 20:09:19] -rw------- 1 boinc boinc       653 Apr  5 20:09 Qm0KDmOcjR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDm1XQKDmJOW6pm.diag
[2026-04-05 20:09:19] -rw-rw-r-- 1 boinc boinc     21218 Apr  5 20:09 stderr.txt
[2026-04-05 20:09:19] HITS file was successfully produced:
[2026-04-05 20:09:19] -rw------- 1 boinc boinc 199743799 Apr  5 20:08 shared/HITS.pool.root.1
[2026-04-05 20:09:19]  *** Contents of shared directory: ***
[2026-04-05 20:09:19] total 417752
[2026-04-05 20:09:19] -rw-r--r-- 2 boinc boinc 226650242 Apr  5 19:15 ATLAS.root_0
[2026-04-05 20:09:19] -rw-r--r-- 2 boinc boinc     15845 Apr  5 19:15 start_atlas.sh
[2026-04-05 20:09:19] -rw-r--r-- 2 boinc boinc    656749 Apr  5 19:15 input.tar.gz
[2026-04-05 20:09:19] -rw------- 1 boinc boinc 199743799 Apr  5 20:08 HITS.pool.root.1
[2026-04-05 20:09:19] -rw------- 1 boinc boinc    696320 Apr  5 20:09 result.tar.gz
20:09:21 (3961588): run_atlas exited; CPU time 33243.268137
20:09:21 (3961588): called boinc_finish(0)

</stderr_txt>
]]>

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