Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:42:31 (729495): wrapper (7.7.26015): starting
04:42:31 (729495): wrapper: running run_atlas (--nthreads 12)
[2026-04-01 04:42:31] Arguments: --nthreads 12
[2026-04-01 04:42:31] Threads: 12
[2026-04-01 04:42:31] Checking for CVMFS
[2026-04-01 04:42:31] No cvmfs_config command found, will try listing directly
[2026-04-01 04:42:31] CVMFS is ok
[2026-04-01 04:42:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-01 04:42:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-01 04:42:31] Further information can be found at the LHC@home message board.
[2026-04-01 04:42:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 04:42:31] Checking for apptainer binary...
[2026-04-01 04:42:31] which: no apptainer in ((null))
[2026-04-01 04:42:31] apptainer is not installed, using version from CVMFS
[2026-04-01 04:42:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 04:42:31] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot228/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-04-01 04:42:31] apptainer works
[2026-04-01 04:42:31] Set ATHENA_PROC_NUMBER=12
[2026-04-01 04:42:31] Set ATHENA_CORE_NUMBER=12
[2026-04-01 04:42:31] Starting ATLAS job with PandaID=7072874229
[2026-04-01 04:42:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot228/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 05:12:52]  *** The last 200 lines of the pilot log: ***
[2026-04-01 05:12:52]  domain=
[2026-04-01 05:12:52]  filesize=338584
[2026-04-01 05:12:52]  filetype=log
[2026-04-01 05:12:52]  guid=b14bf350-caa7-4634-8c5c-8a2fce0ff156
[2026-04-01 05:12:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-01 05:12:52]  is_altstaged=None
[2026-04-01 05:12:52]  is_tar=False
[2026-04-01 05:12:52]  lfn=log.49263191._012667.job.log.tgz.1
[2026-04-01 05:12:52]  mtime=0
[2026-04-01 05:12:52]  protocol_id=None
[2026-04-01 05:12:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-01 05:12:52]  replicas=None
[2026-04-01 05:12:52]  scope=mc23_13p6TeV
[2026-04-01 05:12:52]  status=None
[2026-04-01 05:12:52]  status_code=0
[2026-04-01 05:12:52]  storage_token=
[2026-04-01 05:12:52]  surl=/var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7072874229/log.49263191._012667.job.log.tgz.1
[2026-04-01 05:12:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/f7/log.49263191._012667.job.log.tgz.1
[2026-04-01 05:12:52]  workdir=None
[2026-04-01 05:12:52] ]
[2026-04-01 05:12:52] 2026-04-01 03:11:42,159 | INFO     | transferring file log.49263191._012667.job.log.tgz.1 from /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7072874229/log.49263191._012667.job.log.tgz.1 to /var/lib/
[2026-04-01 05:12:52] 2026-04-01 03:11:42,159 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7072874229/log.49263191._012667.job.log.tgz.1 /var/lib/boinc/var/slot228/slots/1/
[2026-04-01 05:12:52] 2026-04-01 03:11:42,177 | INFO     | adding to output.list: log.49263191._012667.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/f7/log.49263191._012667.job.log.tg
[2026-04-01 05:12:52] 2026-04-01 03:11:42,177 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-01 05:12:52] 2026-04-01 03:11:42,178 | INFO     | summary of transferred files:
[2026-04-01 05:12:52] 2026-04-01 03:11:42,178 | INFO     |  -- lfn=log.49263191._012667.job.log.tgz.1, status_code=0, status=transferred
[2026-04-01 05:12:52] 2026-04-01 03:11:42,178 | INFO     | stage-out finished correctly
[2026-04-01 05:12:52] 2026-04-01 03:11:43,679 | INFO     | monitor loop #133: job 0:7072874229 is in state 'finished'
[2026-04-01 05:12:52] 2026-04-01 03:11:43,680 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-01 05:12:52] 2026-04-01 03:11:43,865 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-01 05:12:52] 2026-04-01 03:11:44,167 | INFO     | job 7072874229 has state=finished
[2026-04-01 05:12:52] 2026-04-01 03:11:44,167 | INFO     | preparing for final server update for job 7072874229 in state='finished'
[2026-04-01 05:12:52] 2026-04-01 03:11:44,168 | INFO     | reading metadata from: /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7072874229/jobReport.json
[2026-04-01 05:12:52] 2026-04-01 03:11:44,169 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot228/slots/1/workernode_map.json
[2026-04-01 05:12:52] 2026-04-01 03:11:44,169 | INFO     | this job has now completed (state=finished)
[2026-04-01 05:12:52] 2026-04-01 03:11:44,170 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-01 05:12:52] 2026-04-01 03:11:44,170 | INFO     | log transfer has been attempted: DONE
[2026-04-01 05:12:52] 2026-04-01 03:11:44,170 | INFO     | job 7072874229 has finished - writing final server update
[2026-04-01 05:12:52] 2026-04-01 03:11:44,170 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1629917/.job.ad'
[2026-04-01 05:12:52] 2026-04-01 03:11:44,170 | INFO     | total number of processed events: 400 (read)
[2026-04-01 05:12:52] 2026-04-01 03:11:44,187 | INFO     | using path: /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7072874229/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 05:12:52] 2026-04-01 03:11:44,188 | INFO     | extracted standard info from prmon json
[2026-04-01 05:12:52] 2026-04-01 03:11:44,188 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 05:12:52] 2026-04-01 03:11:44,188 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 05:12:52] 2026-04-01 03:11:44,188 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 05:12:52] 2026-04-01 03:11:44,189 | INFO     | fitting pss+swap vs Time
[2026-04-01 05:12:52] 2026-04-01 03:11:44,189 | INFO     | sum of square deviations: 3294945.5
[2026-04-01 05:12:52] 2026-04-01 03:11:44,189 | INFO     | sum of deviations: 88090771.0
[2026-04-01 05:12:52] 2026-04-01 03:11:44,189 | INFO     | mean x (centered): 0.0
[2026-04-01 05:12:52] 2026-04-01 03:11:44,189 | INFO     | mean y: 2702670.6363636362
[2026-04-01 05:12:52] 2026-04-01 03:11:44,189 | INFO     | intersect: 2702670.6363636362
[2026-04-01 05:12:52] 2026-04-01 03:11:44,189 | INFO     | chi2: 4.2981474723685655e-05
[2026-04-01 05:12:52] 2026-04-01 03:11:44,189 | INFO     | current memory leak: 26.74 B/s (using 22 data points, chi2=0.00)
[2026-04-01 05:12:52] 2026-04-01 03:11:44,190 | INFO     | could have reported an average CPU frequency of 3635 MHz (4 samples)
[2026-04-01 05:12:52] 2026-04-01 03:11:44,190 | INFO     | ..............................
[2026-04-01 05:12:52] 2026-04-01 03:11:44,190 | INFO     | . Timing measurements:
[2026-04-01 05:12:52] 2026-04-01 03:11:44,190 | INFO     | . get job = 0 s
[2026-04-01 05:12:52] 2026-04-01 03:11:44,190 | INFO     | . initial setup = 4 s
[2026-04-01 05:12:52] 2026-04-01 03:11:44,190 | INFO     | . payload setup = 5 s
[2026-04-01 05:12:52] 2026-04-01 03:11:44,190 | INFO     | . stage-in = 0 s
[2026-04-01 05:12:52] 2026-04-01 03:11:44,190 | INFO     | . payload execution = 1718 s
[2026-04-01 05:12:52] 2026-04-01 03:11:44,190 | INFO     | . stage-out = 0 s
[2026-04-01 05:12:52] 2026-04-01 03:11:44,190 | INFO     | . log creation = 0 s
[2026-04-01 05:12:52] 2026-04-01 03:11:44,190 | INFO     | ..............................
[2026-04-01 05:12:52] 2026-04-01 03:11:44,236 | INFO     | 
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | job summary report
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | --------------------------------------------------
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | PanDA job id: 7072874229
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | task id: 49263191
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | errors: (none)
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | pilot state: finished 
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | transexitcode: 0
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | exeerrorcode: 0
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | exeerrordiag: 
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | exitcode: 0
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | exitmsg: OK
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | cpuconsumptiontime: 18092 s
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | nevents: 400
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | neventsw: 0
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | pid: 740317
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | pgrp: 740317
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | corecount: 12
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | event service: False
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | sizes: {0: 2281605, 11: 2281605, 1727: 2306468, 1728: 2315490, 1730: 2315740}
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | --------------------------------------------------
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | 
[2026-04-01 05:12:52] 2026-04-01 03:11:44,237 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot228/slots/1
[2026-04-01 05:12:52] 2026-04-01 03:11:44,251 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,251 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,251 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | job 7072874229 has completed (purged errors)
[2026-04-01 05:12:52] 2026-04-01 03:11:44,252 | INFO     | overall cleanup function is called
[2026-04-01 05:12:52] 2026-04-01 03:11:45,259 | INFO     | --- collectZombieJob: --- 10, [740317]
[2026-04-01 05:12:52] 2026-04-01 03:11:45,259 | INFO     | zombie collector waiting for pid 740317
[2026-04-01 05:12:52] 2026-04-01 03:11:45,259 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 05:12:52] 2026-04-01 03:11:45,260 | INFO     | collected zombie processes
[2026-04-01 05:12:52] 2026-04-01 03:11:45,260 | INFO     | will attempt to kill all subprocesses of pid=740317
[2026-04-01 05:12:52] 2026-04-01 03:11:45,604 | INFO     | process IDs to be killed: [740317] (in reverse order)
[2026-04-01 05:12:52] 2026-04-01 03:11:45,754 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 05:12:52] 2026-04-01 03:11:45,754 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 05:12:52] 2026-04-01 03:11:45,779 | INFO     | did not find any defunct processes belonging to 740317
[2026-04-01 05:12:52] 2026-04-01 03:11:45,800 | INFO     | did not find any defunct processes belonging to 740317
[2026-04-01 05:12:52] 2026-04-01 03:11:45,801 | INFO     | Ready for new job
[2026-04-01 05:12:52] 2026-04-01 03:11:45,801 | INFO     | **************************************
[2026-04-01 05:12:52] 2026-04-01 03:11:45,802 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-01 05:12:52] 2026-04-01 03:11:45,802 | INFO     | **************************************
[2026-04-01 05:12:52] 2026-04-01 03:11:45,802 | INFO     | 
[2026-04-01 05:12:52] 2026-04-01 03:11:45,807 | INFO     | architecture information:
[2026-04-01 05:12:52] 2026-04-01 03:11:45,807 | INFO     | executing command: cat /etc/os-release
[2026-04-01 05:12:52] 2026-04-01 03:11:45,822 | INFO     | cat /etc/os-release:
[2026-04-01 05:12:52] NAME="CentOS Linux"
[2026-04-01 05:12:52] VERSION="7 (Core)"
[2026-04-01 05:12:52] ID="centos"
[2026-04-01 05:12:52] ID_LIKE="rhel fedora"
[2026-04-01 05:12:52] VERSION_ID="7"
[2026-04-01 05:12:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 05:12:52] ANSI_COLOR="0;31"
[2026-04-01 05:12:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 05:12:52] HOME_URL="https://www.centos.org/"
[2026-04-01 05:12:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 05:12:52] 
[2026-04-01 05:12:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 05:12:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 05:12:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 05:12:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 05:12:52] 
[2026-04-01 05:12:52] 2026-04-01 03:11:45,822 | INFO     | **************************************
[2026-04-01 05:12:52] 2026-04-01 03:11:46,324 | INFO     | executing command: df -mP /var/lib/boinc/var/slot228/slots/1
[2026-04-01 05:12:52] 2026-04-01 03:11:46,338 | INFO     | sufficient remaining disk space (266867834880 B)
[2026-04-01 05:12:52] 2026-04-01 03:11:46,338 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 05:12:52] 2026-04-01 03:11:46,338 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 05:12:52] 2026-04-01 03:11:46,338 | INFO     | update_server=False
[2026-04-01 05:12:52] 2026-04-01 03:11:46,338 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-01 05:12:52] 2026-04-01 03:11:46,339 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 05:12:52] 2026-04-01 03:11:46,613 | INFO     | all data control threads have been joined
[2026-04-01 05:12:52] 2026-04-01 03:11:47,117 | INFO     | all payload control threads have been joined
[2026-04-01 05:12:52] 2026-04-01 03:11:47,187 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 05:12:52] 2026-04-01 03:11:47,187 | INFO     | aborting loop
[2026-04-01 05:12:52] 2026-04-01 03:11:47,343 | INFO     | [job] retrieve thread has finished
[2026-04-01 05:12:52] 2026-04-01 03:11:47,478 | INFO     | [payload] validate_post thread has finished
[2026-04-01 05:12:52] 2026-04-01 03:11:47,588 | INFO     | all job control threads have been joined
[2026-04-01 05:12:52] 2026-04-01 03:11:47,618 | INFO     | [data] control thread has finished
[2026-04-01 05:12:52] 2026-04-01 03:11:47,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 05:12:52] 2026-04-01 03:11:47,852 | INFO     | [job] validate thread has finished
[2026-04-01 05:12:52] 2026-04-01 03:11:47,908 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 05:12:52] 2026-04-01 03:11:48,115 | INFO     | [data] copytool_in thread has finished
[2026-04-01 05:12:52] 2026-04-01 03:11:48,122 | INFO     | [payload] control thread has finished
[2026-04-01 05:12:52] 2026-04-01 03:11:48,163 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 05:12:52] 2026-04-01 03:11:48,192 | INFO     | [job] job monitor thread has finished
[2026-04-01 05:12:52] 2026-04-01 03:11:48,414 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 05:12:52] 2026-04-01 03:11:48,419 | INFO     | [payload] failed_post thread has finished
[2026-04-01 05:12:52] 2026-04-01 03:11:48,594 | INFO     | [job] control thread has finished
[2026-04-01 05:12:52] 2026-04-01 03:11:49,246 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 05:12:52] 2026-04-01 03:11:49,736 | INFO     | [data] copytool_out thread has finished
[2026-04-01 05:12:52] 2026-04-01 03:11:50,251 | INFO     | [job] queue monitor thread has finished
[2026-04-01 05:12:52] 2026-04-01 03:11:50,345 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 05:12:52] 2026-04-01 03:11:56,656 | INFO     | job.realtimelogging is not enabled
[2026-04-01 05:12:52] 2026-04-01 03:11:57,661 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 05:12:52] 2026-04-01 03:12:17,234 | INFO     | PID=734065 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-01 05:12:52] 2026-04-01 03:12:17,235 | INFO     | .. there are 15 such processes running
[2026-04-01 05:12:52] 2026-04-01 03:12:17,235 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 05:12:52] 2026-04-01 03:12:17,235 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 05:12:52] 2026-04-01 03:12:17,235 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 05:12:52] 2026-04-01 03:12:38,059 [wrapper] supervise_pilot (15 min periods counter: 3)
[2026-04-01 05:12:52] 2026-04-01 03:12:45,437 | INFO     | [monitor] cgroup control has ended
[2026-04-01 05:12:52] 2026-04-01 03:12:46,930 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22378592212800)>', '<ExcThread(monitor, started 22378355902208)>']
[2026-04-01 05:12:52] 2026-04-01 03:12:47,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 05:12:52] 2026-04-01 03:12:47,360 | INFO     | [monitor] control thread has ended
[2026-04-01 05:12:52] 2026-04-01 03:12:51,934 | INFO     | all workflow threads have been joined
[2026-04-01 05:12:52] 2026-04-01 03:12:51,934 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 05:12:52] 2026-04-01 03:12:51,934 | INFO     | traces error code: 0
[2026-04-01 05:12:52] 2026-04-01 03:12:51,934 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 05:12:52] 2026-04-01 03:12:52,067 [wrapper] ==== pilot stdout END ====
[2026-04-01 05:12:52] 2026-04-01 03:12:52,069 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 05:12:52] 2026-04-01 03:12:52,071 [wrapper] pilotpid: 734065
[2026-04-01 05:12:52] 2026-04-01 03:12:52,073 [wrapper] Pilot exit status: 0
[2026-04-01 05:12:52] 2026-04-01 03:12:52,080 [wrapper] pandaids: 7072874229
[2026-04-01 05:12:52] 2026-04-01 03:12:52,180 [wrapper] cleanup supervisor_pilot  972362 734066
[2026-04-01 05:12:52] 2026-04-01 03:12:52,182 [wrapper] Test setup, not cleaning
[2026-04-01 05:12:52] 2026-04-01 03:12:52,185 [wrapper] apfmon messages muted
[2026-04-01 05:12:52] 2026-04-01 03:12:52,187 [wrapper] ==== wrapper stdout END ====
[2026-04-01 05:12:52] 2026-04-01 03:12:52,188 [wrapper] ==== wrapper stderr END ====
[2026-04-01 05:12:52]  *** Error codes and diagnostics ***
[2026-04-01 05:12:52]     "exeErrorCode": 0,
[2026-04-01 05:12:52]     "pilotErrorCode": 0,
[2026-04-01 05:12:52]  *** Listing of results directory ***
[2026-04-01 05:12:52] total 410736
[2026-04-01 05:12:52] -rw-r--r--. 1 boinc boinc    644034 Mar 31 06:42 pilot3.tar.gz
[2026-04-01 05:12:52] -rw-r--r--. 1 boinc boinc      5118 Mar 31 06:44 queuedata.json
[2026-04-01 05:12:52] -rwx------. 1 boinc boinc     36322 Mar 31 06:44 runpilot2-wrapper.sh
[2026-04-01 05:12:52] -rw-r--r--. 1 boinc boinc       100 Apr  1 04:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 05:12:52] -rwxr-xr-x. 1 boinc boinc      7986 Apr  1 04:42 run_atlas
[2026-04-01 05:12:52] -rw-r--r--. 1 boinc boinc       105 Apr  1 04:42 job.xml
[2026-04-01 05:12:52] -rw-r--r--. 1 boinc boinc      6713 Apr  1 04:42 init_data.xml
[2026-04-01 05:12:52] -rw-r--r--. 2 boinc boinc 223267427 Apr  1 04:42 EVNT.49263189._000507.pool.root.1
[2026-04-01 05:12:52] -rw-r--r--. 2 boinc boinc    656750 Apr  1 04:42 input.tar.gz
[2026-04-01 05:12:52] -rw-r--r--. 2 boinc boinc     15845 Apr  1 04:42 start_atlas.sh
[2026-04-01 05:12:52] drwxrwx--x. 2 boinc boinc      4096 Apr  1 04:42 shared
[2026-04-01 05:12:52] -rw-r--r--. 1 boinc boinc         0 Apr  1 04:42 boinc_lockfile
[2026-04-01 05:12:52] -rw-r--r--. 1 boinc boinc      2577 Apr  1 04:42 pandaJob.out
[2026-04-01 05:12:52] -rw-------. 1 boinc boinc   1005014 Apr  1 04:42 agis_schedconf.cvmfs.json
[2026-04-01 05:12:52] -rw-------. 1 boinc boinc   1511579 Apr  1 04:42 agis_ddmendpoints.agis.ALL.json
[2026-04-01 05:12:52] -rw-------. 1 boinc boinc       445 Apr  1 04:42 workernode_map.json
[2026-04-01 05:12:52] drwx------. 5 boinc boinc      4096 Apr  1 04:42 pilot3
[2026-04-01 05:12:52] -rw-------. 1 boinc boinc 192160196 Apr  1 05:11 HITS.49263191._012667.pool.root.1
[2026-04-01 05:12:52] -rw-r--r--. 1 boinc boinc       529 Apr  1 05:11 boinc_task_state.xml
[2026-04-01 05:12:52] -rw-------. 1 boinc boinc      1025 Apr  1 05:11 memory_monitor_summary.json
[2026-04-01 05:12:52] -rw-------. 1 boinc boinc    338584 Apr  1 05:11 log.49263191._012667.job.log.tgz.1
[2026-04-01 05:12:52] -rw-------. 1 boinc boinc      6377 Apr  1 05:11 heartbeat_new.json
[2026-04-01 05:12:52] -rw-------. 1 boinc boinc      6268 Apr  1 05:11 heartbeat.json
[2026-04-01 05:12:52] -rw-------. 1 boinc boinc        95 Apr  1 05:12 pilot_heartbeat.json
[2026-04-01 05:12:52] -rw-r--r--. 1 boinc boinc      8192 Apr  1 05:12 boinc_mmap_file
[2026-04-01 05:12:52] -rw-------. 1 boinc boinc      4901 Apr  1 05:12 pilotlog.txt
[2026-04-01 05:12:52] -rw-r--r--. 1 boinc boinc        27 Apr  1 05:12 wrapper_checkpoint.txt
[2026-04-01 05:12:52] -rw-------. 1 boinc boinc    210116 Apr  1 05:12 log.49263191._012667.job.log.1
[2026-04-01 05:12:52] -rw-------. 1 boinc boinc       357 Apr  1 05:12 output.list
[2026-04-01 05:12:52] -rw-r--r--. 1 boinc boinc       620 Apr  1 05:12 runtime_log
[2026-04-01 05:12:52] -rw-------. 1 boinc boinc    563200 Apr  1 05:12 result.tar.gz
[2026-04-01 05:12:52] -rw-------. 1 boinc boinc       658 Apr  1 05:12 ylMLDmm8fR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmv1PKDmTJUIWo.diag
[2026-04-01 05:12:52] -rw-r--r--. 1 boinc boinc      9223 Apr  1 05:12 runtime_log.err
[2026-04-01 05:12:52] -rw-r--r--. 1 boinc boinc     20864 Apr  1 05:12 stderr.txt
[2026-04-01 05:12:52] HITS file was successfully produced:
[2026-04-01 05:12:52] -rw-------. 1 boinc boinc 192160196 Apr  1 05:11 shared/HITS.pool.root.1
[2026-04-01 05:12:52]  *** Contents of shared directory: ***
[2026-04-01 05:12:52] total 406916
[2026-04-01 05:12:52] -rw-r--r--. 2 boinc boinc 223267427 Apr  1 04:42 ATLAS.root_0
[2026-04-01 05:12:52] -rw-r--r--. 2 boinc boinc    656750 Apr  1 04:42 input.tar.gz
[2026-04-01 05:12:52] -rw-r--r--. 2 boinc boinc     15845 Apr  1 04:42 start_atlas.sh
[2026-04-01 05:12:52] -rw-------. 1 boinc boinc 192160196 Apr  1 05:11 HITS.pool.root.1
[2026-04-01 05:12:52] -rw-------. 1 boinc boinc    563200 Apr  1 05:12 result.tar.gz
05:12:54 (729495): run_atlas exited; CPU time 18139.963382
05:12:54 (729495): called boinc_finish(0)

</stderr_txt>
]]>

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