Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:57:24 (1333988): wrapper (7.7.26015): starting
05:57:24 (1333988): wrapper: running run_atlas (--nthreads 12)
[2026-04-01 05:57:24] Arguments: --nthreads 12
[2026-04-01 05:57:24] Threads: 12
[2026-04-01 05:57:24] Checking for CVMFS
[2026-04-01 05:57:24] No cvmfs_config command found, will try listing directly
[2026-04-01 05:57:24] CVMFS is ok
[2026-04-01 05:57:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-01 05:57:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-01 05:57:24] Further information can be found at the LHC@home message board.
[2026-04-01 05:57:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 05:57:24] Checking for apptainer binary...
[2026-04-01 05:57:24] which: no apptainer in ((null))
[2026-04-01 05:57:24] apptainer is not installed, using version from CVMFS
[2026-04-01 05:57:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 05:57:24] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot252/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-04-01 05:57:24] apptainer works
[2026-04-01 05:57:24] Set ATHENA_PROC_NUMBER=12
[2026-04-01 05:57:24] Set ATHENA_CORE_NUMBER=12
[2026-04-01 05:57:24] Starting ATLAS job with PandaID=7072874892
[2026-04-01 05:57:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot252/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 06:26:46]  *** The last 200 lines of the pilot log: ***
[2026-04-01 06:26:46]  filesize=328387
[2026-04-01 06:26:46]  filetype=log
[2026-04-01 06:26:46]  guid=f2aca6cd-277b-44a7-970a-509d22e655af
[2026-04-01 06:26:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-01 06:26:46]  is_altstaged=None
[2026-04-01 06:26:46]  is_tar=False
[2026-04-01 06:26:46]  lfn=log.49263191._012858.job.log.tgz.1
[2026-04-01 06:26:46]  mtime=0
[2026-04-01 06:26:46]  protocol_id=None
[2026-04-01 06:26:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-01 06:26:46]  replicas=None
[2026-04-01 06:26:46]  scope=mc23_13p6TeV
[2026-04-01 06:26:46]  status=None
[2026-04-01 06:26:46]  status_code=0
[2026-04-01 06:26:46]  storage_token=
[2026-04-01 06:26:46]  surl=/var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7072874892/log.49263191._012858.job.log.tgz.1
[2026-04-01 06:26:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/9a/log.49263191._012858.job.log.tgz.1
[2026-04-01 06:26:46]  workdir=None
[2026-04-01 06:26:46] ]
[2026-04-01 06:26:46] 2026-04-01 04:25:56,040 | INFO     | transferring file log.49263191._012858.job.log.tgz.1 from /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7072874892/log.49263191._012858.job.log.tgz.1 to /var/lib/
[2026-04-01 06:26:46] 2026-04-01 04:25:56,040 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7072874892/log.49263191._012858.job.log.tgz.1 /var/lib/boinc/var/slot252/slots/0/
[2026-04-01 06:26:46] 2026-04-01 04:25:56,055 | INFO     | adding to output.list: log.49263191._012858.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/9a/log.49263191._012858.job.log.tg
[2026-04-01 06:26:46] 2026-04-01 04:25:56,056 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-01 06:26:46] 2026-04-01 04:25:56,056 | INFO     | summary of transferred files:
[2026-04-01 06:26:46] 2026-04-01 04:25:56,056 | INFO     |  -- lfn=log.49263191._012858.job.log.tgz.1, status_code=0, status=transferred
[2026-04-01 06:26:46] 2026-04-01 04:25:56,056 | INFO     | stage-out finished correctly
[2026-04-01 06:26:46] 2026-04-01 04:25:57,434 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-01 06:26:46] 2026-04-01 04:25:58,235 | INFO     | job 7072874892 has state=finished
[2026-04-01 06:26:46] 2026-04-01 04:25:58,235 | INFO     | preparing for final server update for job 7072874892 in state='finished'
[2026-04-01 06:26:46] 2026-04-01 04:25:58,236 | INFO     | reading metadata from: /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7072874892/jobReport.json
[2026-04-01 06:26:46] 2026-04-01 04:25:58,237 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot252/slots/0/workernode_map.json
[2026-04-01 06:26:46] 2026-04-01 04:25:58,237 | INFO     | this job has now completed (state=finished)
[2026-04-01 06:26:46] 2026-04-01 04:25:58,238 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-01 06:26:46] 2026-04-01 04:25:58,238 | INFO     | log transfer has been attempted: DONE
[2026-04-01 06:26:46] 2026-04-01 04:25:58,238 | INFO     | job 7072874892 has finished - writing final server update
[2026-04-01 06:26:46] 2026-04-01 04:25:58,238 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3131299/.job.ad'
[2026-04-01 06:26:46] 2026-04-01 04:25:58,238 | INFO     | total number of processed events: 400 (read)
[2026-04-01 06:26:46] 2026-04-01 04:25:58,256 | INFO     | using path: /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7072874892/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 06:26:46] 2026-04-01 04:25:58,256 | INFO     | extracted standard info from prmon json
[2026-04-01 06:26:46] 2026-04-01 04:25:58,256 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 06:26:46] 2026-04-01 04:25:58,256 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 06:26:46] 2026-04-01 04:25:58,256 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 06:26:46] 2026-04-01 04:25:58,257 | INFO     | fitting pss+swap vs Time
[2026-04-01 06:26:46] 2026-04-01 04:25:58,257 | INFO     | sum of square deviations: 2865170.0
[2026-04-01 06:26:46] 2026-04-01 04:25:58,257 | INFO     | sum of deviations: 389851.00000000186
[2026-04-01 06:26:46] 2026-04-01 04:25:58,257 | INFO     | mean x (centered): 0.0
[2026-04-01 06:26:46] 2026-04-01 04:25:58,257 | INFO     | mean y: 2685548.761904762
[2026-04-01 06:26:46] 2026-04-01 04:25:58,257 | INFO     | intersect: 2685548.761904762
[2026-04-01 06:26:46] 2026-04-01 04:25:58,257 | INFO     | chi2: 0.00016498501813321152
[2026-04-01 06:26:46] 2026-04-01 04:25:58,258 | INFO     | current memory leak: 0.14 B/s (using 21 data points, chi2=0.00)
[2026-04-01 06:26:46] 2026-04-01 04:25:58,258 | INFO     | could have reported an average CPU frequency of 3612 MHz (4 samples)
[2026-04-01 06:26:46] 2026-04-01 04:25:58,258 | INFO     | ..............................
[2026-04-01 06:26:46] 2026-04-01 04:25:58,258 | INFO     | . Timing measurements:
[2026-04-01 06:26:46] 2026-04-01 04:25:58,258 | INFO     | . get job = 0 s
[2026-04-01 06:26:46] 2026-04-01 04:25:58,258 | INFO     | . initial setup = 4 s
[2026-04-01 06:26:46] 2026-04-01 04:25:58,258 | INFO     | . payload setup = 6 s
[2026-04-01 06:26:46] 2026-04-01 04:25:58,258 | INFO     | . stage-in = 0 s
[2026-04-01 06:26:46] 2026-04-01 04:25:58,258 | INFO     | . payload execution = 1675 s
[2026-04-01 06:26:46] 2026-04-01 04:25:58,258 | INFO     | . stage-out = 0 s
[2026-04-01 06:26:46] 2026-04-01 04:25:58,258 | INFO     | . log creation = 0 s
[2026-04-01 06:26:46] 2026-04-01 04:25:58,258 | INFO     | ..............................
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | 
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | job summary report
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | --------------------------------------------------
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | PanDA job id: 7072874892
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | task id: 49263191
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | errors: (none)
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | pilot state: finished 
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | transexitcode: 0
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | exeerrorcode: 0
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | exeerrordiag: 
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | exitcode: 0
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | exitmsg: OK
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | cpuconsumptiontime: 17559 s
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | nevents: 400
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | neventsw: 0
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | pid: 1344874
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | pgrp: 1344874
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | corecount: 12
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | event service: False
[2026-04-01 06:26:46] 2026-04-01 04:25:58,707 | INFO     | sizes: {0: 2279135, 1: 2281633, 11: 2281633, 1686: 2306469, 1688: 2315491, 1689: 2315547, 1690: 2315869}
[2026-04-01 06:26:46] 2026-04-01 04:25:58,708 | INFO     | --------------------------------------------------
[2026-04-01 06:26:46] 2026-04-01 04:25:58,708 | INFO     | 
[2026-04-01 06:26:46] 2026-04-01 04:25:58,708 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot252/slots/0
[2026-04-01 06:26:46] 2026-04-01 04:25:58,726 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,726 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | job 7072874892 has completed (purged errors)
[2026-04-01 06:26:46] 2026-04-01 04:25:58,727 | INFO     | overall cleanup function is called
[2026-04-01 06:26:46] 2026-04-01 04:25:59,490 | WARNING  | process 1344874 can no longer be monitored (due to stat problems) - aborting
[2026-04-01 06:26:46] 2026-04-01 04:25:59,730 | INFO     | --- collectZombieJob: --- 10, [1344874]
[2026-04-01 06:26:46] 2026-04-01 04:25:59,730 | INFO     | zombie collector waiting for pid 1344874
[2026-04-01 06:26:46] 2026-04-01 04:25:59,731 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 06:26:46] 2026-04-01 04:25:59,731 | INFO     | collected zombie processes
[2026-04-01 06:26:46] 2026-04-01 04:25:59,731 | INFO     | will attempt to kill all subprocesses of pid=1344874
[2026-04-01 06:26:46] 2026-04-01 04:25:59,798 | INFO     | using path: /var/lib/boinc/var/slot252/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 06:26:46] 2026-04-01 04:26:00,921 | INFO     | process IDs to be killed: [1344874] (in reverse order)
[2026-04-01 06:26:46] 2026-04-01 04:26:00,938 | INFO     | number of running child processes to parent process 1344874: 1
[2026-04-01 06:26:46] 2026-04-01 04:26:00,939 | INFO     | maximum number of monitored processes: 6
[2026-04-01 06:26:46] 2026-04-01 04:26:00,939 | INFO     | aborting job monitoring since job object (job id=7072874892) has expired
[2026-04-01 06:26:46] 2026-04-01 04:26:01,062 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 06:26:46] 2026-04-01 04:26:01,062 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 06:26:46] 2026-04-01 04:26:01,085 | INFO     | did not find any defunct processes belonging to 1344874
[2026-04-01 06:26:46] 2026-04-01 04:26:01,106 | INFO     | did not find any defunct processes belonging to 1344874
[2026-04-01 06:26:46] 2026-04-01 04:26:01,106 | INFO     | Ready for new job
[2026-04-01 06:26:46] 2026-04-01 04:26:01,107 | INFO     | **************************************
[2026-04-01 06:26:46] 2026-04-01 04:26:01,107 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-01 06:26:46] 2026-04-01 04:26:01,107 | INFO     | **************************************
[2026-04-01 06:26:46] 2026-04-01 04:26:01,107 | INFO     | 
[2026-04-01 06:26:46] 2026-04-01 04:26:01,112 | INFO     | architecture information:
[2026-04-01 06:26:46] 2026-04-01 04:26:01,112 | INFO     | executing command: cat /etc/os-release
[2026-04-01 06:26:46] 2026-04-01 04:26:01,125 | INFO     | cat /etc/os-release:
[2026-04-01 06:26:46] NAME="CentOS Linux"
[2026-04-01 06:26:46] VERSION="7 (Core)"
[2026-04-01 06:26:46] ID="centos"
[2026-04-01 06:26:46] ID_LIKE="rhel fedora"
[2026-04-01 06:26:46] VERSION_ID="7"
[2026-04-01 06:26:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 06:26:46] ANSI_COLOR="0;31"
[2026-04-01 06:26:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 06:26:46] HOME_URL="https://www.centos.org/"
[2026-04-01 06:26:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 06:26:46] 
[2026-04-01 06:26:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 06:26:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 06:26:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 06:26:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 06:26:46] 
[2026-04-01 06:26:46] 2026-04-01 04:26:01,125 | INFO     | **************************************
[2026-04-01 06:26:46] 2026-04-01 04:26:01,627 | INFO     | executing command: df -mP /var/lib/boinc/var/slot252/slots/0
[2026-04-01 06:26:46] 2026-04-01 04:26:01,644 | INFO     | sufficient remaining disk space (272364470272 B)
[2026-04-01 06:26:46] 2026-04-01 04:26:01,645 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 06:26:46] 2026-04-01 04:26:01,645 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 06:26:46] 2026-04-01 04:26:01,645 | INFO     | update_server=False
[2026-04-01 06:26:46] 2026-04-01 04:26:01,645 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-01 06:26:46] 2026-04-01 04:26:01,645 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 06:26:46] 2026-04-01 04:26:01,645 | INFO     | will abort loop
[2026-04-01 06:26:46] 2026-04-01 04:26:01,645 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 06:26:46] 2026-04-01 04:26:02,196 | INFO     | all payload control threads have been joined
[2026-04-01 06:26:46] 2026-04-01 04:26:02,640 | INFO     | all data control threads have been joined
[2026-04-01 06:26:46] 2026-04-01 04:26:02,650 | INFO     | [job] retrieve thread has finished
[2026-04-01 06:26:46] 2026-04-01 04:26:02,651 | INFO     | [job] job monitor thread has finished
[2026-04-01 06:26:46] 2026-04-01 04:26:02,870 | INFO     | [job] validate thread has finished
[2026-04-01 06:26:46] 2026-04-01 04:26:02,933 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 06:26:46] 2026-04-01 04:26:02,952 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 06:26:46] 2026-04-01 04:26:03,014 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 06:26:46] 2026-04-01 04:26:03,018 | INFO     | all job control threads have been joined
[2026-04-01 06:26:46] 2026-04-01 04:26:03,154 | INFO     | [payload] validate_post thread has finished
[2026-04-01 06:26:46] 2026-04-01 04:26:03,202 | INFO     | [payload] control thread has finished
[2026-04-01 06:26:46] 2026-04-01 04:26:03,243 | INFO     | [data] copytool_in thread has finished
[2026-04-01 06:26:46] 2026-04-01 04:26:03,318 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 06:26:46] 2026-04-01 04:26:03,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 06:26:46] 2026-04-01 04:26:03,643 | INFO     | [data] control thread has finished
[2026-04-01 06:26:46] 2026-04-01 04:26:03,651 | INFO     | [data] copytool_out thread has finished
[2026-04-01 06:26:46] 2026-04-01 04:26:03,972 | INFO     | [payload] failed_post thread has finished
[2026-04-01 06:26:46] 2026-04-01 04:26:04,023 | INFO     | [job] control thread has finished
[2026-04-01 06:26:46] 2026-04-01 04:26:04,105 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 06:26:46] 2026-04-01 04:26:04,324 | INFO     | [job] queue monitor thread has finished
[2026-04-01 06:26:46] 2026-04-01 04:26:07,490 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 06:26:46] 2026-04-01 04:26:31,891 | INFO     | PID=1338844 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-01 06:26:46] 2026-04-01 04:26:31,894 | INFO     | .. there are 14 such processes running
[2026-04-01 06:26:46] 2026-04-01 04:26:31,894 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 06:26:46] 2026-04-01 04:26:31,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 06:26:46] 2026-04-01 04:26:31,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 06:26:46] 2026-04-01 04:26:39,865 | INFO     | [monitor] cgroup control has ended
[2026-04-01 06:26:46] 2026-04-01 04:26:40,745 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23228946290496)>', '<ExcThread(monitor, started 23228704888576)>']
[2026-04-01 06:26:46] 2026-04-01 04:26:40,930 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 06:26:46] 2026-04-01 04:26:40,930 | INFO     | [monitor] control thread has ended
[2026-04-01 06:26:46] 2026-04-01 04:26:45,748 | INFO     | all workflow threads have been joined
[2026-04-01 06:26:46] 2026-04-01 04:26:45,748 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 06:26:46] 2026-04-01 04:26:45,748 | INFO     | traces error code: 0
[2026-04-01 06:26:46] 2026-04-01 04:26:45,749 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 06:26:46] 2026-04-01 04:26:45,870 [wrapper] ==== pilot stdout END ====
[2026-04-01 06:26:46] 2026-04-01 04:26:45,876 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 06:26:46] 2026-04-01 04:26:45,878 [wrapper] pilotpid: 1338844
[2026-04-01 06:26:46] 2026-04-01 04:26:45,880 [wrapper] Pilot exit status: 0
[2026-04-01 06:26:46] 2026-04-01 04:26:45,887 [wrapper] pandaids: 7072874892
[2026-04-01 06:26:46] 2026-04-01 04:26:45,987 [wrapper] cleanup supervisor_pilot 1457724 1338845
[2026-04-01 06:26:46] 2026-04-01 04:26:45,989 [wrapper] Test setup, not cleaning
[2026-04-01 06:26:46] 2026-04-01 04:26:45,991 [wrapper] apfmon messages muted
[2026-04-01 06:26:46] 2026-04-01 04:26:45,994 [wrapper] ==== wrapper stdout END ====
[2026-04-01 06:26:46] 2026-04-01 04:26:45,996 [wrapper] ==== wrapper stderr END ====
[2026-04-01 06:26:46]  *** Error codes and diagnostics ***
[2026-04-01 06:26:46]     "exeErrorCode": 0,
[2026-04-01 06:26:46]     "pilotErrorCode": 0,
[2026-04-01 06:26:46]  *** Listing of results directory ***
[2026-04-01 06:26:46] total 412236
[2026-04-01 06:26:46] -rw-r--r--. 1 boinc boinc    644034 Mar 31 06:42 pilot3.tar.gz
[2026-04-01 06:26:46] -rw-r--r--. 1 boinc boinc      5118 Mar 31 06:44 queuedata.json
[2026-04-01 06:26:46] -rwx------. 1 boinc boinc     36322 Mar 31 06:44 runpilot2-wrapper.sh
[2026-04-01 06:26:46] -rw-r--r--. 1 boinc boinc       100 Apr  1 05:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 06:26:46] -rwxr-xr-x. 1 boinc boinc      7986 Apr  1 05:57 run_atlas
[2026-04-01 06:26:46] -rw-r--r--. 1 boinc boinc       105 Apr  1 05:57 job.xml
[2026-04-01 06:26:46] -rw-r--r--. 2 boinc boinc     15845 Apr  1 05:57 start_atlas.sh
[2026-04-01 06:26:46] drwxrwx--x. 2 boinc boinc      4096 Apr  1 05:57 shared
[2026-04-01 06:26:46] -rw-r--r--. 2 boinc boinc    656753 Apr  1 05:57 input.tar.gz
[2026-04-01 06:26:46] -rw-r--r--. 1 boinc boinc      6713 Apr  1 05:57 init_data.xml
[2026-04-01 06:26:46] -rw-r--r--. 2 boinc boinc 221837055 Apr  1 05:57 EVNT.49263189._000515.pool.root.1
[2026-04-01 06:26:46] -rw-r--r--. 1 boinc boinc         0 Apr  1 05:57 boinc_lockfile
[2026-04-01 06:26:46] -rw-r--r--. 1 boinc boinc      2577 Apr  1 05:57 pandaJob.out
[2026-04-01 06:26:46] -rw-------. 1 boinc boinc   1005006 Apr  1 05:57 agis_schedconf.cvmfs.json
[2026-04-01 06:26:46] -rw-------. 1 boinc boinc   1511579 Apr  1 05:57 agis_ddmendpoints.agis.ALL.json
[2026-04-01 06:26:46] -rw-------. 1 boinc boinc       445 Apr  1 05:57 workernode_map.json
[2026-04-01 06:26:46] drwx------. 5 boinc boinc      4096 Apr  1 05:57 pilot3
[2026-04-01 06:26:46] -rw-r--r--. 1 boinc boinc       529 Apr  1 06:25 boinc_task_state.xml
[2026-04-01 06:26:46] -rw-------. 1 boinc boinc 195153133 Apr  1 06:25 HITS.49263191._012858.pool.root.1
[2026-04-01 06:26:46] -rw-------. 1 boinc boinc      1025 Apr  1 06:25 memory_monitor_summary.json
[2026-04-01 06:26:46] -rw-------. 1 boinc boinc    328387 Apr  1 06:25 log.49263191._012858.job.log.tgz.1
[2026-04-01 06:26:46] -rw-------. 1 boinc boinc      6377 Apr  1 06:25 heartbeat_new.json
[2026-04-01 06:26:46] -rw-------. 1 boinc boinc      6268 Apr  1 06:25 heartbeat.json
[2026-04-01 06:26:46] -rw-------. 1 boinc boinc        95 Apr  1 06:26 pilot_heartbeat.json
[2026-04-01 06:26:46] -rw-r--r--. 1 boinc boinc        27 Apr  1 06:26 wrapper_checkpoint.txt
[2026-04-01 06:26:46] -rw-r--r--. 1 boinc boinc      8192 Apr  1 06:26 boinc_mmap_file
[2026-04-01 06:26:46] -rw-------. 1 boinc boinc      4832 Apr  1 06:26 pilotlog.txt
[2026-04-01 06:26:46] -rw-------. 1 boinc boinc    205367 Apr  1 06:26 log.49263191._012858.job.log.1
[2026-04-01 06:26:46] -rw-------. 1 boinc boinc       357 Apr  1 06:26 output.list
[2026-04-01 06:26:46] -rw-r--r--. 1 boinc boinc       620 Apr  1 06:26 runtime_log
[2026-04-01 06:26:46] -rw-------. 1 boinc boinc    552960 Apr  1 06:26 result.tar.gz
[2026-04-01 06:26:46] -rw-r--r--. 1 boinc boinc      9223 Apr  1 06:26 runtime_log.err
[2026-04-01 06:26:46] -rw-------. 1 boinc boinc       660 Apr  1 06:26 GNFKDmx8fR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDml2PKDmSuTyMo.diag
[2026-04-01 06:26:46] -rw-r--r--. 1 boinc boinc     21069 Apr  1 06:26 stderr.txt
[2026-04-01 06:26:46] HITS file was successfully produced:
[2026-04-01 06:26:46] -rw-------. 1 boinc boinc 195153133 Apr  1 06:25 shared/HITS.pool.root.1
[2026-04-01 06:26:46]  *** Contents of shared directory: ***
[2026-04-01 06:26:46] total 408428
[2026-04-01 06:26:46] -rw-r--r--. 2 boinc boinc     15845 Apr  1 05:57 start_atlas.sh
[2026-04-01 06:26:46] -rw-r--r--. 2 boinc boinc    656753 Apr  1 05:57 input.tar.gz
[2026-04-01 06:26:46] -rw-r--r--. 2 boinc boinc 221837055 Apr  1 05:57 ATLAS.root_0
[2026-04-01 06:26:46] -rw-------. 1 boinc boinc 195153133 Apr  1 06:25 HITS.pool.root.1
[2026-04-01 06:26:46] -rw-------. 1 boinc boinc    552960 Apr  1 06:26 result.tar.gz
06:26:47 (1333988): run_atlas exited; CPU time 17607.561848
06:26:47 (1333988): called boinc_finish(0)

</stderr_txt>
]]>

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