Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:47:51 (24426): wrapper (7.7.26015): starting
05:47:51 (24426): wrapper: running run_atlas (--nthreads 12)
[2026-03-31 05:47:51] Arguments: --nthreads 12
[2026-03-31 05:47:51] Threads: 12
[2026-03-31 05:47:51] Checking for CVMFS
[2026-03-31 05:47:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 05:47:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 05:47:51] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 05:47:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 05:47:51] 2.11.2.0 2984 467475 89140 157914 1 50 17062632 20275200 1 130560 1 200615592 99.958 25937389 16848 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-31 05:47:51] CVMFS is ok
[2026-03-31 05:47:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 05:47:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 05:47:51] Further information can be found at the LHC@home message board.
[2026-03-31 05:47:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 05:47:51] Checking for apptainer binary...
[2026-03-31 05:47:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 05:47:51] Running /usr/bin/apptainer --version
[2026-03-31 05:47:51] apptainer version 1.3.2-1.el7
[2026-03-31 05:47:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 05:47:53] c-205-26.aglt2.org
[2026-03-31 05:47:53] apptainer works
[2026-03-31 05:47:53] Set ATHENA_PROC_NUMBER=12
[2026-03-31 05:47:53] Set ATHENA_CORE_NUMBER=12
[2026-03-31 05:47:53] Starting ATLAS job with PandaID=7073090073
[2026-03-31 05:47:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 07:00:26]  *** The last 200 lines of the pilot log: ***
[2026-03-31 07:00:26]  domain=
[2026-03-31 07:00:26]  filesize=347506
[2026-03-31 07:00:26]  filetype=log
[2026-03-31 07:00:26]  guid=03c26edc-d350-4d74-91a9-0fa195e24e9f
[2026-03-31 07:00:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-31 07:00:26]  is_altstaged=None
[2026-03-31 07:00:26]  is_tar=False
[2026-03-31 07:00:26]  lfn=log.49263208._012878.job.log.tgz.1
[2026-03-31 07:00:26]  mtime=0
[2026-03-31 07:00:26]  protocol_id=None
[2026-03-31 07:00:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-31 07:00:26]  replicas=None
[2026-03-31 07:00:26]  scope=mc23_13p6TeV
[2026-03-31 07:00:26]  status=None
[2026-03-31 07:00:26]  status_code=0
[2026-03-31 07:00:26]  storage_token=
[2026-03-31 07:00:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7073090073/log.49263208._012878.job.log.tgz.1
[2026-03-31 07:00:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/e1/log.49263208._012878.job.log.tgz.1
[2026-03-31 07:00:26]  workdir=None
[2026-03-31 07:00:26] ]
[2026-03-31 07:00:26] 2026-03-31 10:59:26,299 | INFO     | transferring file log.49263208._012878.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7073090073/log.49263208._012878.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-31 07:00:26] 2026-03-31 10:59:26,299 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7073090073/log.49263208._012878.job.log.tgz.1 /tmp/boinchome/slots/0/log.49263208._012878.job
[2026-03-31 07:00:26] 2026-03-31 10:59:26,320 | INFO     | adding to output.list: log.49263208._012878.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/e1/log.49263208._012878.job.log.tg
[2026-03-31 07:00:26] 2026-03-31 10:59:26,321 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-31 07:00:26] 2026-03-31 10:59:26,321 | INFO     | summary of transferred files:
[2026-03-31 07:00:26] 2026-03-31 10:59:26,322 | INFO     |  -- lfn=log.49263208._012878.job.log.tgz.1, status_code=0, status=transferred
[2026-03-31 07:00:26] 2026-03-31 10:59:26,322 | INFO     | stage-out finished correctly
[2026-03-31 07:00:26] 2026-03-31 10:59:28,161 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-31 07:00:26] 2026-03-31 10:59:29,126 | INFO     | job 7073090073 has state=finished
[2026-03-31 07:00:26] 2026-03-31 10:59:29,126 | INFO     | preparing for final server update for job 7073090073 in state='finished'
[2026-03-31 07:00:26] 2026-03-31 10:59:29,127 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7073090073/jobReport.json
[2026-03-31 07:00:26] 2026-03-31 10:59:29,129 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-31 07:00:26] 2026-03-31 10:59:29,130 | INFO     | this job has now completed (state=finished)
[2026-03-31 07:00:26] 2026-03-31 10:59:29,130 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 07:00:26] 2026-03-31 10:59:29,130 | INFO     | log transfer has been attempted: DONE
[2026-03-31 07:00:26] 2026-03-31 10:59:29,131 | INFO     | job 7073090073 has finished - writing final server update
[2026-03-31 07:00:26] 2026-03-31 10:59:29,131 | INFO     | total number of processed events: 400 (read)
[2026-03-31 07:00:26] 2026-03-31 10:59:29,134 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7073090073/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 07:00:26] 2026-03-31 10:59:29,134 | INFO     | extracted standard info from prmon json
[2026-03-31 07:00:26] 2026-03-31 10:59:29,135 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 07:00:26] 2026-03-31 10:59:29,135 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 07:00:26] 2026-03-31 10:59:29,135 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 07:00:26] 2026-03-31 10:59:29,136 | INFO     | fitting pss+swap vs Time
[2026-03-31 07:00:26] 2026-03-31 10:59:29,136 | INFO     | sum of square deviations: 77515872.0
[2026-03-31 07:00:26] 2026-03-31 10:59:29,137 | INFO     | sum of deviations: 1114293832.0000002
[2026-03-31 07:00:26] 2026-03-31 10:59:29,137 | INFO     | mean x (centered): 0.0
[2026-03-31 07:00:26] 2026-03-31 10:59:29,137 | INFO     | mean y: 2967104.365079365
[2026-03-31 07:00:26] 2026-03-31 10:59:29,137 | INFO     | intersect: 2967104.365079365
[2026-03-31 07:00:26] 2026-03-31 10:59:29,137 | INFO     | chi2: 0.0013729809373442727
[2026-03-31 07:00:26] 2026-03-31 10:59:29,137 | INFO     | current memory leak: 14.38 B/s (using 63 data points, chi2=0.00)
[2026-03-31 07:00:26] 2026-03-31 10:59:29,138 | INFO     | could have reported an average CPU frequency of 1729 MHz (6 samples)
[2026-03-31 07:00:26] 2026-03-31 10:59:29,138 | INFO     | ..............................
[2026-03-31 07:00:26] 2026-03-31 10:59:29,138 | INFO     | . Timing measurements:
[2026-03-31 07:00:26] 2026-03-31 10:59:29,138 | INFO     | . get job = 0 s
[2026-03-31 07:00:26] 2026-03-31 10:59:29,138 | INFO     | . initial setup = 7 s
[2026-03-31 07:00:26] 2026-03-31 10:59:29,138 | INFO     | . payload setup = 13 s
[2026-03-31 07:00:26] 2026-03-31 10:59:29,138 | INFO     | . stage-in = 0 s
[2026-03-31 07:00:26] 2026-03-31 10:59:29,138 | INFO     | . payload execution = 4242 s
[2026-03-31 07:00:26] 2026-03-31 10:59:29,139 | INFO     | . stage-out = 0 s
[2026-03-31 07:00:26] 2026-03-31 10:59:29,139 | INFO     | . log creation = 0 s
[2026-03-31 07:00:26] 2026-03-31 10:59:29,139 | INFO     | ..............................
[2026-03-31 07:00:26] 2026-03-31 10:59:29,216 | INFO     | 
[2026-03-31 07:00:26] 2026-03-31 10:59:29,216 | INFO     | job summary report
[2026-03-31 07:00:26] 2026-03-31 10:59:29,216 | INFO     | --------------------------------------------------
[2026-03-31 07:00:26] 2026-03-31 10:59:29,216 | INFO     | PanDA job id: 7073090073
[2026-03-31 07:00:26] 2026-03-31 10:59:29,217 | INFO     | task id: 49263208
[2026-03-31 07:00:26] 2026-03-31 10:59:29,217 | INFO     | errors: (none)
[2026-03-31 07:00:26] 2026-03-31 10:59:29,217 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 07:00:26] 2026-03-31 10:59:29,217 | INFO     | pilot state: finished 
[2026-03-31 07:00:26] 2026-03-31 10:59:29,217 | INFO     | transexitcode: 0
[2026-03-31 07:00:26] 2026-03-31 10:59:29,217 | INFO     | exeerrorcode: 0
[2026-03-31 07:00:26] 2026-03-31 10:59:29,217 | INFO     | exeerrordiag: 
[2026-03-31 07:00:26] 2026-03-31 10:59:29,218 | INFO     | exitcode: 0
[2026-03-31 07:00:26] 2026-03-31 10:59:29,218 | INFO     | exitmsg: OK
[2026-03-31 07:00:26] 2026-03-31 10:59:29,218 | INFO     | cpuconsumptiontime: 46330 s
[2026-03-31 07:00:26] 2026-03-31 10:59:29,218 | INFO     | nevents: 400
[2026-03-31 07:00:26] 2026-03-31 10:59:29,218 | INFO     | neventsw: 0
[2026-03-31 07:00:26] 2026-03-31 10:59:29,218 | INFO     | pid: 421
[2026-03-31 07:00:26] 2026-03-31 10:59:29,218 | INFO     | pgrp: 421
[2026-03-31 07:00:26] 2026-03-31 10:59:29,219 | INFO     | corecount: 12
[2026-03-31 07:00:26] 2026-03-31 10:59:29,219 | INFO     | event service: False
[2026-03-31 07:00:26] 2026-03-31 10:59:29,219 | INFO     | sizes: {0: 2280015, 1: 2281617, 11: 2281617, 4260: 2316717, 4262: 2316717, 4263: 2316911}
[2026-03-31 07:00:26] 2026-03-31 10:59:29,219 | INFO     | --------------------------------------------------
[2026-03-31 07:00:26] 2026-03-31 10:59:29,219 | INFO     | 
[2026-03-31 07:00:26] 2026-03-31 10:59:29,219 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-31 07:00:26] 2026-03-31 10:59:29,243 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,244 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,244 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,244 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,244 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,244 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,245 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,245 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,245 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,245 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,245 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,245 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,246 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,246 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,246 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,246 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,246 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,246 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 07:00:26] 2026-03-31 10:59:29,246 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,247 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 07:00:26] 2026-03-31 10:59:29,247 | INFO     | job 7073090073 has completed (purged errors)
[2026-03-31 07:00:26] 2026-03-31 10:59:29,247 | INFO     | overall cleanup function is called
[2026-03-31 07:00:26] 2026-03-31 10:59:30,255 | INFO     | --- collectZombieJob: --- 10, [421]
[2026-03-31 07:00:26] 2026-03-31 10:59:30,255 | INFO     | zombie collector waiting for pid 421
[2026-03-31 07:00:26] 2026-03-31 10:59:30,255 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 07:00:26] 2026-03-31 10:59:30,255 | INFO     | collected zombie processes
[2026-03-31 07:00:26] 2026-03-31 10:59:30,256 | INFO     | will attempt to kill all subprocesses of pid=421
[2026-03-31 07:00:26] 2026-03-31 10:59:30,346 | INFO     | process IDs to be killed: [421] (in reverse order)
[2026-03-31 07:00:26] 2026-03-31 10:59:30,396 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 07:00:26] 2026-03-31 10:59:30,396 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 07:00:26] 2026-03-31 10:59:30,400 | INFO     | did not find any defunct processes belonging to 421
[2026-03-31 07:00:26] 2026-03-31 10:59:30,403 | INFO     | did not find any defunct processes belonging to 421
[2026-03-31 07:00:26] 2026-03-31 10:59:30,403 | INFO     | Ready for new job
[2026-03-31 07:00:26] 2026-03-31 10:59:30,405 | INFO     | **************************************
[2026-03-31 07:00:26] 2026-03-31 10:59:30,405 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 07:00:26] 2026-03-31 10:59:30,405 | INFO     | **************************************
[2026-03-31 07:00:26] 2026-03-31 10:59:30,405 | INFO     | 
[2026-03-31 07:00:26] 2026-03-31 10:59:30,406 | INFO     | architecture information:
[2026-03-31 07:00:26] 2026-03-31 10:59:30,406 | INFO     | executing command: cat /etc/os-release
[2026-03-31 07:00:26] 2026-03-31 10:59:30,423 | INFO     | cat /etc/os-release:
[2026-03-31 07:00:26] NAME="CentOS Linux"
[2026-03-31 07:00:26] VERSION="7 (Core)"
[2026-03-31 07:00:26] ID="centos"
[2026-03-31 07:00:26] ID_LIKE="rhel fedora"
[2026-03-31 07:00:26] VERSION_ID="7"
[2026-03-31 07:00:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 07:00:26] ANSI_COLOR="0;31"
[2026-03-31 07:00:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 07:00:26] HOME_URL="https://www.centos.org/"
[2026-03-31 07:00:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 07:00:26] 
[2026-03-31 07:00:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 07:00:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 07:00:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 07:00:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 07:00:26] 
[2026-03-31 07:00:26] 2026-03-31 10:59:30,424 | INFO     | **************************************
[2026-03-31 07:00:26] 2026-03-31 10:59:30,927 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-31 07:00:26] 2026-03-31 10:59:30,944 | INFO     | sufficient remaining disk space (29318184960 B)
[2026-03-31 07:00:26] 2026-03-31 10:59:30,944 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 07:00:26] 2026-03-31 10:59:30,945 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 07:00:26] 2026-03-31 10:59:30,945 | INFO     | update_server=False
[2026-03-31 07:00:26] 2026-03-31 10:59:30,945 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 07:00:26] 2026-03-31 10:59:30,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 07:00:26] 2026-03-31 10:59:31,216 | INFO     | job.realtimelogging is not enabled
[2026-03-31 07:00:26] 2026-03-31 10:59:31,319 | INFO     | all data control threads have been joined
[2026-03-31 07:00:26] 2026-03-31 10:59:31,796 | WARNING  | process 421 can no longer be monitored (due to stat problems) - aborting
[2026-03-31 07:00:26] 2026-03-31 10:59:31,871 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 07:00:26] 2026-03-31 10:59:31,912 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 07:00:26] 2026-03-31 10:59:31,950 | INFO     | [job] retrieve thread has finished
[2026-03-31 07:00:26] 2026-03-31 10:59:31,951 | INFO     | [job] queue monitor thread has finished
[2026-03-31 07:00:26] 2026-03-31 10:59:31,959 | INFO     | number of running child processes to parent process 421: 1
[2026-03-31 07:00:26] 2026-03-31 10:59:31,959 | INFO     | maximum number of monitored processes: 6
[2026-03-31 07:00:26] 2026-03-31 10:59:31,959 | INFO     | aborting job monitoring since job object (job id=7073090073) has expired
[2026-03-31 07:00:26] 2026-03-31 10:59:31,959 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 07:00:26] 2026-03-31 10:59:31,960 | INFO     | will abort loop
[2026-03-31 07:00:26] 2026-03-31 10:59:32,221 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 07:00:26] 2026-03-31 10:59:32,285 | INFO     | all payload control threads have been joined
[2026-03-31 07:00:26] 2026-03-31 10:59:32,325 | INFO     | [data] control thread has finished
[2026-03-31 07:00:26] 2026-03-31 10:59:32,503 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 07:00:26] 2026-03-31 10:59:32,536 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 07:00:26] 2026-03-31 10:59:32,566 | INFO     | [job] validate thread has finished
[2026-03-31 07:00:26] 2026-03-31 10:59:32,634 | INFO     | all job control threads have been joined
[2026-03-31 07:00:26] 2026-03-31 10:59:32,724 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 07:00:26] 2026-03-31 10:59:32,965 | INFO     | [job] job monitor thread has finished
[2026-03-31 07:00:26] 2026-03-31 10:59:32,987 | INFO     | [payload] validate_post thread has finished
[2026-03-31 07:00:26] 2026-03-31 10:59:33,059 | INFO     | [payload] failed_post thread has finished
[2026-03-31 07:00:26] 2026-03-31 10:59:33,216 | INFO     | [data] copytool_in thread has finished
[2026-03-31 07:00:26] 2026-03-31 10:59:33,290 | INFO     | [payload] control thread has finished
[2026-03-31 07:00:26] 2026-03-31 10:59:33,639 | INFO     | [job] control thread has finished
[2026-03-31 07:00:26] 2026-03-31 10:59:33,918 | INFO     | [data] copytool_out thread has finished
[2026-03-31 07:00:26] 2026-03-31 10:59:34,246 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 07:00:26] 2026-03-31 10:59:38,251 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 07:00:26] 2026-03-31 11:00:01,777 | INFO     | PID=28462 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-31 07:00:26] 2026-03-31 11:00:01,777 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 07:00:26] 2026-03-31 11:00:01,777 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 07:00:26] 2026-03-31 11:00:01,777 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 07:00:26] 2026-03-31 11:00:20,988 | INFO     | [monitor] cgroup control has ended
[2026-03-31 07:00:26] 2026-03-31 11:00:21,585 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140534433912640)>', '<ExcThread(monitor, started 140533435442944)>']
[2026-03-31 07:00:26] 2026-03-31 11:00:21,859 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 07:00:26] 2026-03-31 11:00:21,860 | INFO     | [monitor] control thread has ended
[2026-03-31 07:00:26] 2026-03-31 11:00:26,588 | INFO     | all workflow threads have been joined
[2026-03-31 07:00:26] 2026-03-31 11:00:26,588 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 07:00:26] 2026-03-31 11:00:26,588 | INFO     | traces error code: 0
[2026-03-31 07:00:26] 2026-03-31 11:00:26,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 07:00:26] 2026-03-31 11:00:26,684 [wrapper] ==== pilot stdout END ====
[2026-03-31 07:00:26] 2026-03-31 11:00:26,688 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 07:00:26] 2026-03-31 11:00:26,691 [wrapper] pilotpid: 28462
[2026-03-31 07:00:26] 2026-03-31 11:00:26,695 [wrapper] Pilot exit status: 0
[2026-03-31 07:00:26] 2026-03-31 11:00:26,709 [wrapper] pandaids: 7073090073
[2026-03-31 07:00:26] 2026-03-31 11:00:26,752 [wrapper] cleanup supervisor_pilot 18895 28463
[2026-03-31 07:00:26] 2026-03-31 11:00:26,756 [wrapper] Test setup, not cleaning
[2026-03-31 07:00:26] 2026-03-31 11:00:26,760 [wrapper] apfmon messages muted
[2026-03-31 07:00:26] 2026-03-31 11:00:26,764 [wrapper] ==== wrapper stdout END ====
[2026-03-31 07:00:26] 2026-03-31 11:00:26,768 [wrapper] ==== wrapper stderr END ====
[2026-03-31 07:00:26]  *** Error codes and diagnostics ***
[2026-03-31 07:00:26]     "exeErrorCode": 0,
[2026-03-31 07:00:26]     "pilotErrorCode": 0,
[2026-03-31 07:00:26]  *** Listing of results directory ***
[2026-03-31 07:00:26] total 416848
[2026-03-31 07:00:26] -rw-r--r-- 1 boincer umatlas    644034 Mar 31 03:16 pilot3.tar.gz
[2026-03-31 07:00:26] -rwx------ 1 boincer umatlas     36322 Mar 31 03:17 runpilot2-wrapper.sh
[2026-03-31 07:00:26] -rw-r--r-- 1 boincer umatlas      5118 Mar 31 03:18 queuedata.json
[2026-03-31 07:00:26] -rw-r--r-- 1 boincer umatlas       100 Mar 31 05:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 07:00:26] -rwxr-xr-x 1 boincer umatlas      7986 Mar 31 05:47 run_atlas
[2026-03-31 07:00:26] -rw-r--r-- 1 boincer umatlas       105 Mar 31 05:47 job.xml
[2026-03-31 07:00:26] -rw-r--r-- 2 boincer umatlas 223695255 Mar 31 05:47 EVNT.49263206._000565.pool.root.1
[2026-03-31 07:00:26] -rw-r--r-- 2 boincer umatlas     15845 Mar 31 05:47 start_atlas.sh
[2026-03-31 07:00:26] drwxrwx--x 2 boincer umatlas      4096 Mar 31 05:47 shared
[2026-03-31 07:00:26] -rw-r--r-- 2 boincer umatlas    656750 Mar 31 05:47 input.tar.gz
[2026-03-31 07:00:26] -rw-r--r-- 1 boincer umatlas         0 Mar 31 05:47 boinc_lockfile
[2026-03-31 07:00:26] -rw-r--r-- 1 boincer umatlas      2574 Mar 31 05:47 pandaJob.out
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas        57 Mar 31 05:47 setup.sh.local
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas   1003225 Mar 31 05:48 agis_schedconf.cvmfs.json
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas   1511579 Mar 31 05:48 agis_ddmendpoints.agis.ALL.json
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas       445 Mar 31 05:48 workernode_map.json
[2026-03-31 07:00:26] drwx------ 5 boincer umatlas      4096 Mar 31 05:48 pilot3
[2026-03-31 07:00:26] -rw-r--r-- 1 boincer umatlas      5952 Mar 31 06:58 init_data.xml
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas 197552590 Mar 31 06:58 HITS.49263208._012878.pool.root.1
[2026-03-31 07:00:26] -rw-r--r-- 1 boincer umatlas       529 Mar 31 06:58 boinc_task_state.xml
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas        95 Mar 31 06:59 pilot_heartbeat.json
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas      1056 Mar 31 06:59 memory_monitor_summary.json
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas    347506 Mar 31 06:59 log.49263208._012878.job.log.tgz.1
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas      6444 Mar 31 06:59 heartbeat_new.json
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas      6335 Mar 31 06:59 heartbeat.json
[2026-03-31 07:00:26] -rw-r--r-- 1 boincer umatlas      8192 Mar 31 07:00 boinc_mmap_file
[2026-03-31 07:00:26] -rw-r--r-- 1 boincer umatlas        27 Mar 31 07:00 wrapper_checkpoint.txt
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas      5326 Mar 31 07:00 pilotlog.txt
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas    418477 Mar 31 07:00 log.49263208._012878.job.log.1
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas       357 Mar 31 07:00 output.list
[2026-03-31 07:00:26] -rw-r--r-- 1 boincer umatlas       620 Mar 31 07:00 runtime_log
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas    788480 Mar 31 07:00 result.tar.gz
[2026-03-31 07:00:26] -rw-r--r-- 1 boincer umatlas      9343 Mar 31 07:00 runtime_log.err
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas       659 Mar 31 07:00 EBBLDm2WiR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmMPQKDmLKPTkn.diag
[2026-03-31 07:00:26] -rw-r--r-- 1 boincer umatlas     21011 Mar 31 07:00 stderr.txt
[2026-03-31 07:00:26] HITS file was successfully produced:
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas 197552590 Mar 31 06:58 shared/HITS.pool.root.1
[2026-03-31 07:00:26]  *** Contents of shared directory: ***
[2026-03-31 07:00:26] total 412816
[2026-03-31 07:00:26] -rw-r--r-- 2 boincer umatlas 223695255 Mar 31 05:47 ATLAS.root_0
[2026-03-31 07:00:26] -rw-r--r-- 2 boincer umatlas     15845 Mar 31 05:47 start_atlas.sh
[2026-03-31 07:00:26] -rw-r--r-- 2 boincer umatlas    656750 Mar 31 05:47 input.tar.gz
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas 197552590 Mar 31 06:58 HITS.pool.root.1
[2026-03-31 07:00:26] -rw------- 1 boincer umatlas    788480 Mar 31 07:00 result.tar.gz
07:00:28 (24426): run_atlas exited; CPU time 46288.573583
07:00:28 (24426): called boinc_finish(0)

</stderr_txt>
]]>

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