Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:01:54 (2813): wrapper (7.7.26015): starting
20:01:54 (2813): wrapper: running run_atlas (--nthreads 8)
[2026-03-31 20:01:54] Arguments: --nthreads 8
[2026-03-31 20:01:54] Threads: 8
[2026-03-31 20:01:54] Checking for CVMFS
[2026-03-31 20:01:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 20:01:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 20:01:56] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 20:01:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 20:01:58] 2.11.2.0 2909 5208 78088 157925 1 54 17318692 25165825 899 130560 0 1603835 99.529 2142884 6986 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-31 20:01:58] CVMFS is ok
[2026-03-31 20:01:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 20:01:58] Checking for apptainer binary...
[2026-03-31 20:01:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 20:01:58] Running /usr/bin/apptainer --version
[2026-03-31 20:01:58] apptainer version 1.3.2-1.el7
[2026-03-31 20:01:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 20:02:08] cg-vwn449.simple-grid.lan
[2026-03-31 20:02:08] apptainer works
[2026-03-31 20:02:08] Set ATHENA_PROC_NUMBER=8
[2026-03-31 20:02:08] Set ATHENA_CORE_NUMBER=8
[2026-03-31 20:02:09] Starting ATLAS job with PandaID=7073089611
[2026-03-31 20:02:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 00:12:04]  *** The last 200 lines of the pilot log: ***
[2026-04-01 00:12:04] 2026-03-31 22:11:10,456 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-01 00:12:04] 2026-03-31 22:11:10,456 | INFO     | log transfer has been attempted: DONE
[2026-04-01 00:12:04] 2026-03-31 22:11:10,456 | INFO     | job 7073089611 has finished - writing final server update
[2026-04-01 00:12:04] 2026-03-31 22:11:10,456 | INFO     | total number of processed events: 400 (read)
[2026-04-01 00:12:04] 2026-03-31 22:11:10,458 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7073089611/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 00:12:04] 2026-03-31 22:11:10,459 | INFO     | extracted standard info from prmon json
[2026-04-01 00:12:04] 2026-03-31 22:11:10,459 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 00:12:04] 2026-03-31 22:11:10,459 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 00:12:04] 2026-03-31 22:11:10,459 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 00:12:04] 2026-03-31 22:11:10,464 | INFO     | fitting pss+swap vs Time
[2026-04-01 00:12:04] 2026-03-31 22:11:10,465 | INFO     | sum of square deviations: 3972995422.5
[2026-04-01 00:12:04] 2026-03-31 22:11:10,467 | INFO     | sum of deviations: 78238976918.99997
[2026-04-01 00:12:04] 2026-03-31 22:11:10,467 | INFO     | mean x (centered): 0.0
[2026-04-01 00:12:04] 2026-03-31 22:11:10,467 | INFO     | mean y: 2426131.769230769
[2026-04-01 00:12:04] 2026-03-31 22:11:10,467 | INFO     | intersect: 2426131.769230769
[2026-04-01 00:12:04] 2026-03-31 22:11:10,468 | INFO     | chi2: 11.082314863556018
[2026-04-01 00:12:04] 2026-03-31 22:11:10,468 | INFO     | sum of square deviations: 3723716330.0
[2026-04-01 00:12:04] 2026-03-31 22:11:10,470 | INFO     | sum of deviations: 108308061146.00002
[2026-04-01 00:12:04] 2026-03-31 22:11:10,470 | INFO     | mean x (centered): 0.0
[2026-04-01 00:12:04] 2026-03-31 22:11:10,471 | INFO     | mean y: 2444278.2794759823
[2026-04-01 00:12:04] 2026-03-31 22:11:10,471 | INFO     | intersect: 2444278.2794759823
[2026-04-01 00:12:04] 2026-03-31 22:11:10,471 | INFO     | chi2: 9.638210996097653
[2026-04-01 00:12:04] 2026-03-31 22:11:10,471 | INFO     | current chi2=9.638210996097653 (change=13.030705996337218 %)
[2026-04-01 00:12:04] 2026-03-31 22:11:10,471 | INFO     | right removable region: 228
[2026-04-01 00:12:04] 2026-03-31 22:11:10,472 | INFO     | sum of square deviations: 3723716330.0
[2026-04-01 00:12:04] 2026-03-31 22:11:10,474 | INFO     | sum of deviations: -4655250075.0
[2026-04-01 00:12:04] 2026-03-31 22:11:10,474 | INFO     | mean x (centered): 0.0
[2026-04-01 00:12:04] 2026-03-31 22:11:10,474 | INFO     | mean y: 2476820.4672489082
[2026-04-01 00:12:04] 2026-03-31 22:11:10,474 | INFO     | intersect: 2476820.4672489082
[2026-04-01 00:12:04] 2026-03-31 22:11:10,475 | INFO     | chi2: 5.632714229278413
[2026-04-01 00:12:04] 2026-03-31 22:11:10,475 | INFO     | current chi2=5.632714229278413 (change=49.17384771478126 %)
[2026-04-01 00:12:04] 2026-03-31 22:11:10,475 | INFO     | sum of square deviations: 3485088600.0
[2026-04-01 00:12:04] 2026-03-31 22:11:10,477 | INFO     | sum of deviations: -70936662801.50002
[2026-04-01 00:12:04] 2026-03-31 22:11:10,477 | INFO     | mean x (centered): 0.0
[2026-04-01 00:12:04] 2026-03-31 22:11:10,477 | INFO     | mean y: 2519137.004464286
[2026-04-01 00:12:04] 2026-03-31 22:11:10,477 | INFO     | intersect: 2519137.004464286
[2026-04-01 00:12:04] 2026-03-31 22:11:10,478 | INFO     | chi2: 2.4160825616665544
[2026-04-01 00:12:04] 2026-03-31 22:11:10,478 | INFO     | current chi2=2.4160825616665544 (change=57.1062464147756 %)
[2026-04-01 00:12:04] 2026-03-31 22:11:10,479 | INFO     | sum of square deviations: 3256879670.0
[2026-04-01 00:12:04] 2026-03-31 22:11:10,480 | INFO     | sum of deviations: -90238327606.0
[2026-04-01 00:12:04] 2026-03-31 22:11:10,480 | INFO     | mean x (centered): 0.0
[2026-04-01 00:12:04] 2026-03-31 22:11:10,481 | INFO     | mean y: 2531909.3242009133
[2026-04-01 00:12:04] 2026-03-31 22:11:10,481 | INFO     | intersect: 2531909.3242009133
[2026-04-01 00:12:04] 2026-03-31 22:11:10,481 | INFO     | chi2: 1.900138665545993
[2026-04-01 00:12:04] 2026-03-31 22:11:10,481 | INFO     | current chi2=1.900138665545993 (change=21.354563966749378 %)
[2026-04-01 00:12:04] 2026-03-31 22:11:10,481 | INFO     | left removable region: 15
[2026-04-01 00:12:04] 2026-03-31 22:11:10,482 | INFO     | sum of square deviations: 2996454322.0
[2026-04-01 00:12:04] 2026-03-31 22:11:10,484 | INFO     | sum of deviations: -58196899757.000015
[2026-04-01 00:12:04] 2026-03-31 22:11:10,484 | INFO     | mean x (centered): 0.0
[2026-04-01 00:12:04] 2026-03-31 22:11:10,484 | INFO     | mean y: 2554044.3615023475
[2026-04-01 00:12:04] 2026-03-31 22:11:10,484 | INFO     | intersect: 2554044.3615023475
[2026-04-01 00:12:04] 2026-03-31 22:11:10,484 | INFO     | chi2: 0.21641917759782933
[2026-04-01 00:12:04] 2026-03-31 22:11:10,485 | INFO     | current memory leak: -19.42 B/s (using 213 data points, chi2=0.22)
[2026-04-01 00:12:04] 2026-03-31 22:11:10,485 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-01 00:12:04] 2026-03-31 22:11:10,485 | INFO     | ..............................
[2026-04-01 00:12:04] 2026-03-31 22:11:10,486 | INFO     | . Timing measurements:
[2026-04-01 00:12:04] 2026-03-31 22:11:10,486 | INFO     | . get job = 0 s
[2026-04-01 00:12:04] 2026-03-31 22:11:10,486 | INFO     | . initial setup = 118 s
[2026-04-01 00:12:04] 2026-03-31 22:11:10,486 | INFO     | . payload setup = 177 s
[2026-04-01 00:12:04] 2026-03-31 22:11:10,486 | INFO     | . stage-in = 0 s
[2026-04-01 00:12:04] 2026-03-31 22:11:10,486 | INFO     | . payload execution = 14359 s
[2026-04-01 00:12:04] 2026-03-31 22:11:10,486 | INFO     | . stage-out = 3 s
[2026-04-01 00:12:04] 2026-03-31 22:11:10,486 | INFO     | . log creation = 1 s
[2026-04-01 00:12:04] 2026-03-31 22:11:10,486 | INFO     | ..............................
[2026-04-01 00:12:04] 2026-03-31 22:11:10,783 | INFO     | 
[2026-04-01 00:12:04] 2026-03-31 22:11:10,783 | INFO     | job summary report
[2026-04-01 00:12:04] 2026-03-31 22:11:10,783 | INFO     | --------------------------------------------------
[2026-04-01 00:12:04] 2026-03-31 22:11:10,783 | INFO     | PanDA job id: 7073089611
[2026-04-01 00:12:04] 2026-03-31 22:11:10,783 | INFO     | task id: 49263208
[2026-04-01 00:12:04] 2026-03-31 22:11:10,783 | INFO     | errors: (none)
[2026-04-01 00:12:04] 2026-03-31 22:11:10,783 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 00:12:04] 2026-03-31 22:11:10,784 | INFO     | pilot state: finished 
[2026-04-01 00:12:04] 2026-03-31 22:11:10,784 | INFO     | transexitcode: 0
[2026-04-01 00:12:04] 2026-03-31 22:11:10,784 | INFO     | exeerrorcode: 0
[2026-04-01 00:12:04] 2026-03-31 22:11:10,784 | INFO     | exeerrordiag: 
[2026-04-01 00:12:04] 2026-03-31 22:11:10,784 | INFO     | exitcode: 0
[2026-04-01 00:12:04] 2026-03-31 22:11:10,784 | INFO     | exitmsg: OK
[2026-04-01 00:12:04] 2026-03-31 22:11:10,784 | INFO     | cpuconsumptiontime: 53208 s
[2026-04-01 00:12:04] 2026-03-31 22:11:10,784 | INFO     | nevents: 400
[2026-04-01 00:12:04] 2026-03-31 22:11:10,784 | INFO     | neventsw: 0
[2026-04-01 00:12:04] 2026-03-31 22:11:10,784 | INFO     | pid: 11267
[2026-04-01 00:12:04] 2026-03-31 22:11:10,784 | INFO     | pgrp: 11267
[2026-04-01 00:12:04] 2026-03-31 22:11:10,785 | INFO     | corecount: 8
[2026-04-01 00:12:04] 2026-03-31 22:11:10,785 | INFO     | event service: False
[2026-04-01 00:12:04] 2026-03-31 22:11:10,785 | INFO     | sizes: {0: 2279734, 1: 2280191, 2: 2281647, 12: 2281647, 14541: 2312531, 14546: 2321529, 14547: 2321713, 14550: 2321907}
[2026-04-01 00:12:04] 2026-03-31 22:11:10,785 | INFO     | --------------------------------------------------
[2026-04-01 00:12:04] 2026-03-31 22:11:10,785 | INFO     | 
[2026-04-01 00:12:04] 2026-03-31 22:11:10,785 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-04-01 00:12:04] 2026-03-31 22:11:11,121 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,122 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,122 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,122 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,122 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,122 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,122 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,122 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,122 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,122 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,122 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,123 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,123 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,123 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,123 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,123 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,123 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,123 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 00:12:04] 2026-03-31 22:11:11,123 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,123 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 00:12:04] 2026-03-31 22:11:11,124 | INFO     | job 7073089611 has completed (purged errors)
[2026-04-01 00:12:04] 2026-03-31 22:11:11,124 | INFO     | overall cleanup function is called
[2026-04-01 00:12:04] 2026-03-31 22:11:12,133 | INFO     | --- collectZombieJob: --- 10, [11267]
[2026-04-01 00:12:04] 2026-03-31 22:11:12,133 | INFO     | zombie collector waiting for pid 11267
[2026-04-01 00:12:04] 2026-03-31 22:11:12,133 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 00:12:04] 2026-03-31 22:11:12,133 | INFO     | collected zombie processes
[2026-04-01 00:12:04] 2026-03-31 22:11:12,133 | INFO     | will attempt to kill all subprocesses of pid=11267
[2026-04-01 00:12:04] 2026-03-31 22:11:12,226 | INFO     | process IDs to be killed: [11267] (in reverse order)
[2026-04-01 00:12:04] 2026-03-31 22:11:12,898 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 00:12:04] 2026-03-31 22:11:12,899 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 00:12:04] 2026-03-31 22:11:12,901 | INFO     | did not find any defunct processes belonging to 11267
[2026-04-01 00:12:04] 2026-03-31 22:11:12,903 | INFO     | did not find any defunct processes belonging to 11267
[2026-04-01 00:12:04] 2026-03-31 22:11:12,903 | INFO     | Ready for new job
[2026-04-01 00:12:04] 2026-03-31 22:11:12,905 | INFO     | **************************************
[2026-04-01 00:12:04] 2026-03-31 22:11:12,905 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-01 00:12:04] 2026-03-31 22:11:12,905 | INFO     | **************************************
[2026-04-01 00:12:04] 2026-03-31 22:11:12,905 | INFO     | 
[2026-04-01 00:12:04] 2026-03-31 22:11:12,906 | INFO     | pilot is running in a VM
[2026-04-01 00:12:04] 2026-03-31 22:11:12,906 | INFO     | architecture information:
[2026-04-01 00:12:04] 2026-03-31 22:11:12,915 | INFO     | executing command: cat /etc/os-release
[2026-04-01 00:12:04] 2026-03-31 22:11:13,187 | INFO     | cat /etc/os-release:
[2026-04-01 00:12:04] NAME="CentOS Linux"
[2026-04-01 00:12:04] VERSION="7 (Core)"
[2026-04-01 00:12:04] ID="centos"
[2026-04-01 00:12:04] ID_LIKE="rhel fedora"
[2026-04-01 00:12:04] VERSION_ID="7"
[2026-04-01 00:12:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 00:12:04] ANSI_COLOR="0;31"
[2026-04-01 00:12:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 00:12:04] HOME_URL="https://www.centos.org/"
[2026-04-01 00:12:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 00:12:04] 
[2026-04-01 00:12:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 00:12:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 00:12:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 00:12:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 00:12:04] 
[2026-04-01 00:12:04] 2026-03-31 22:11:13,188 | INFO     | **************************************
[2026-04-01 00:12:04] 2026-03-31 22:11:13,691 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-04-01 00:12:04] 2026-03-31 22:11:13,937 | INFO     | sufficient remaining disk space (496949526528 B)
[2026-04-01 00:12:04] 2026-03-31 22:11:13,938 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 00:12:04] 2026-03-31 22:11:13,938 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 00:12:04] 2026-03-31 22:11:13,938 | INFO     | update_server=False
[2026-04-01 00:12:04] 2026-03-31 22:11:13,938 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-01 00:12:04] 2026-03-31 22:11:13,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 00:12:04] 2026-03-31 22:11:13,938 | INFO     | aborting loop
[2026-04-01 00:12:04] 2026-03-31 22:11:13,940 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 00:12:04] 2026-03-31 22:11:13,940 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 00:12:04] 2026-03-31 22:11:14,252 | INFO     | all data control threads have been joined
[2026-04-01 00:12:04] 2026-03-31 22:11:14,677 | INFO     | all payload control threads have been joined
[2026-04-01 00:12:04] 2026-03-31 22:11:14,944 | INFO     | [job] retrieve thread has finished
[2026-04-01 00:12:04] 2026-03-31 22:11:14,944 | INFO     | [job] job monitor thread has finished
[2026-04-01 00:12:04] 2026-03-31 22:11:14,950 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 00:12:04] 2026-03-31 22:11:14,953 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 00:12:04] 2026-03-31 22:11:15,258 | INFO     | [data] control thread has finished
[2026-04-01 00:12:04] 2026-03-31 22:11:15,322 | INFO     | all job control threads have been joined
[2026-04-01 00:12:04] 2026-03-31 22:11:15,341 | INFO     | [payload] failed_post thread has finished
[2026-04-01 00:12:04] 2026-03-31 22:11:15,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 00:12:04] 2026-03-31 22:11:15,683 | INFO     | [payload] control thread has finished
[2026-04-01 00:12:04] 2026-03-31 22:11:15,815 | INFO     | [job] validate thread has finished
[2026-04-01 00:12:04] 2026-03-31 22:11:15,947 | INFO     | [data] copytool_out thread has finished
[2026-04-01 00:12:04] 2026-03-31 22:11:16,024 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 00:12:04] 2026-03-31 22:11:16,261 | INFO     | [data] copytool_in thread has finished
[2026-04-01 00:12:04] 2026-03-31 22:11:16,328 | INFO     | [job] control thread has finished
[2026-04-01 00:12:04] 2026-03-31 22:11:16,459 | INFO     | [payload] validate_post thread has finished
[2026-04-01 00:12:04] 2026-03-31 22:11:16,650 | INFO     | [job] queue monitor thread has finished
[2026-04-01 00:12:04] 2026-03-31 22:11:17,949 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 00:12:04] 2026-03-31 22:11:24,027 | INFO     | job.realtimelogging is not enabled
[2026-04-01 00:12:04] 2026-03-31 22:11:25,033 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 00:12:04] 2026-03-31 22:11:43,792 | INFO     | PID=6836 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-01 00:12:04] 2026-03-31 22:11:43,793 | INFO     | .. there are 2 such processes running
[2026-04-01 00:12:04] 2026-03-31 22:11:43,793 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 00:12:04] 2026-03-31 22:11:43,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 00:12:04] 2026-03-31 22:11:43,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 00:12:04] 2026-03-31 22:11:53,773 | INFO     | [monitor] cgroup control has ended
[2026-04-01 00:12:04] 2026-03-31 22:11:54,050 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140330211235648)>', '<ExcThread(monitor, started 140329751648000)>']
[2026-04-01 00:12:04] 2026-03-31 22:11:54,860 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 00:12:04] 2026-03-31 22:11:54,860 | INFO     | [monitor] control thread has ended
[2026-04-01 00:12:04] 2026-03-31 22:11:59,076 | INFO     | all workflow threads have been joined
[2026-04-01 00:12:04] 2026-03-31 22:11:59,076 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 00:12:04] 2026-03-31 22:11:59,076 | INFO     | traces error code: 0
[2026-04-01 00:12:04] 2026-03-31 22:11:59,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 00:12:04] 2026-03-31 22:11:59,560 [wrapper] ==== pilot stdout END ====
[2026-04-01 00:12:04] 2026-03-31 22:11:59,623 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 00:12:04] 2026-03-31 22:11:59,682 [wrapper] pilotpid: 6836
[2026-04-01 00:12:04] 2026-03-31 22:11:59,740 [wrapper] Pilot exit status: 0
[2026-04-01 00:12:04] 2026-03-31 22:12:00,333 [wrapper] pandaids: 7073089611
[2026-04-01 00:12:04] 2026-03-31 22:12:01,434 [wrapper] cleanup supervisor_pilot 17186 6837
[2026-04-01 00:12:04] 2026-03-31 22:12:01,530 [wrapper] Test setup, not cleaning
[2026-04-01 00:12:04] 2026-03-31 22:12:01,633 [wrapper] apfmon messages muted
[2026-04-01 00:12:04] 2026-03-31 22:12:01,728 [wrapper] ==== wrapper stdout END ====
[2026-04-01 00:12:04] 2026-03-31 22:12:01,831 [wrapper] ==== wrapper stderr END ====
[2026-04-01 00:12:04]  *** Error codes and diagnostics ***
[2026-04-01 00:12:04]     "exeErrorCode": 0,
[2026-04-01 00:12:04]     "pilotErrorCode": 0,
[2026-04-01 00:12:04]  *** Listing of results directory ***
[2026-04-01 00:12:04] total 410184
[2026-04-01 00:12:04] -rw-r--r--. 1 boinc boinc    644034 Mar 31 09:16 pilot3.tar.gz
[2026-04-01 00:12:04] -rwx------. 1 boinc boinc     36322 Mar 31 09:16 runpilot2-wrapper.sh
[2026-04-01 00:12:04] -rw-r--r--. 1 boinc boinc      5118 Mar 31 09:16 queuedata.json
[2026-04-01 00:12:04] -rw-r--r--. 1 boinc boinc       100 Mar 31 20:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 00:12:04] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 20:01 run_atlas
[2026-04-01 00:12:04] -rw-r--r--. 1 boinc boinc       105 Mar 31 20:01 job.xml
[2026-04-01 00:12:04] -rw-r--r--. 1 boinc boinc      6391 Mar 31 20:01 init_data.xml
[2026-04-01 00:12:04] -rw-r--r--. 2 boinc boinc 222800657 Mar 31 20:01 EVNT.49263206._000550.pool.root.1
[2026-04-01 00:12:04] -rw-r--r--. 2 boinc boinc     15845 Mar 31 20:01 start_atlas.sh
[2026-04-01 00:12:04] drwxrwx--x. 2 boinc boinc        68 Mar 31 20:01 shared
[2026-04-01 00:12:04] -rw-r--r--. 2 boinc boinc    656748 Mar 31 20:01 input.tar.gz
[2026-04-01 00:12:04] -rw-r--r--. 1 boinc boinc         0 Mar 31 20:01 boinc_lockfile
[2026-04-01 00:12:04] -rw-r--r--. 1 boinc boinc      2575 Mar 31 20:02 pandaJob.out
[2026-04-01 00:12:04] -rw-------. 1 boinc boinc       415 Mar 31 20:08 workernode_map.json
[2026-04-01 00:12:04] -rw-------. 1 boinc boinc   1005014 Mar 31 20:08 agis_schedconf.cvmfs.json
[2026-04-01 00:12:04] drwx------. 5 boinc boinc      4096 Mar 31 20:08 pilot3
[2026-04-01 00:12:04] -rw-------. 1 boinc boinc 189687465 Apr  1 00:09 HITS.49263208._012511.pool.root.1
[2026-04-01 00:12:04] -rw-r--r--. 1 boinc boinc       531 Apr  1 00:10 boinc_task_state.xml
[2026-04-01 00:12:04] -rw-------. 1 boinc boinc      1012 Apr  1 00:10 memory_monitor_summary.json
[2026-04-01 00:12:04] -rw-------. 1 boinc boinc   1511579 Apr  1 00:11 agis_ddmendpoints.agis.ALL.json
[2026-04-01 00:12:04] -rw-------. 1 boinc boinc    392240 Apr  1 00:11 log.49263208._012511.job.log.tgz.1
[2026-04-01 00:12:04] -rw-------. 1 boinc boinc      6342 Apr  1 00:11 heartbeat_new.json
[2026-04-01 00:12:04] -rw-------. 1 boinc boinc      6233 Apr  1 00:11 heartbeat.json
[2026-04-01 00:12:04] -rw-------. 1 boinc boinc        95 Apr  1 00:11 pilot_heartbeat.json
[2026-04-01 00:12:04] -rw-r--r--. 1 boinc boinc      8192 Apr  1 00:11 boinc_mmap_file
[2026-04-01 00:12:04] -rw-r--r--. 1 boinc boinc        28 Apr  1 00:11 wrapper_checkpoint.txt
[2026-04-01 00:12:04] -rw-------. 1 boinc boinc      4950 Apr  1 00:11 pilotlog.txt
[2026-04-01 00:12:04] -rw-------. 1 boinc boinc   1351683 Apr  1 00:12 log.49263208._012511.job.log.1
[2026-04-01 00:12:04] -rw-------. 1 boinc boinc       357 Apr  1 00:12 output.list
[2026-04-01 00:12:04] -rw-r--r--. 1 boinc boinc       620 Apr  1 00:12 runtime_log
[2026-04-01 00:12:04] -rw-------. 1 boinc boinc   1761280 Apr  1 00:12 result.tar.gz
[2026-04-01 00:12:04] -rw-r--r--. 1 boinc boinc      8816 Apr  1 00:12 runtime_log.err
[2026-04-01 00:12:04] -rw-------. 1 boinc boinc       656 Apr  1 00:12 PLSKDmyViR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmwHSKDmwV7HJo.diag
[2026-04-01 00:12:04] -rw-r--r--. 1 boinc boinc     20622 Apr  1 00:12 stderr.txt
[2026-04-01 00:12:04] HITS file was successfully produced:
[2026-04-01 00:12:04] -rw-------. 1 boinc boinc 189687465 Apr  1 00:09 shared/HITS.pool.root.1
[2026-04-01 00:12:04]  *** Contents of shared directory: ***
[2026-04-01 00:12:04] total 405204
[2026-04-01 00:12:04] -rw-r--r--. 2 boinc boinc 222800657 Mar 31 20:01 ATLAS.root_0
[2026-04-01 00:12:04] -rw-r--r--. 2 boinc boinc     15845 Mar 31 20:01 start_atlas.sh
[2026-04-01 00:12:04] -rw-r--r--. 2 boinc boinc    656748 Mar 31 20:01 input.tar.gz
[2026-04-01 00:12:04] -rw-------. 1 boinc boinc 189687465 Apr  1 00:09 HITS.pool.root.1
[2026-04-01 00:12:04] -rw-------. 1 boinc boinc   1761280 Apr  1 00:12 result.tar.gz
00:12:06 (2813): run_atlas exited; CPU time 53351.170375
00:12:06 (2813): called boinc_finish(0)

</stderr_txt>
]]>

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