Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
12:11:10 (539428): wrapper (7.7.26015): starting
12:11:10 (539428): wrapper: running run_atlas (--nthreads 12)
[2026-04-02 12:11:10] Arguments: --nthreads 12
[2026-04-02 12:11:10] Threads: 12
[2026-04-02 12:11:10] Checking for CVMFS
[2026-04-02 12:11:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-02 12:11:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-02 12:11:11] Running cvmfs_config stat atlas.cern.ch
[2026-04-02 12:11:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-02 12:11:11] 2.13.3.0 2457278 9759 57912 157998 0 188 3466054 4096001 2736 130560 0 9383134 99.961 589206 3340 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-02 12:11:11] CVMFS is ok
[2026-04-02 12:11:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-02 12:11:11] Checking for apptainer binary...
[2026-04-02 12:11:11] apptainer is not installed, using version from CVMFS
[2026-04-02 12:11:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-02 12:11:12] dualxeon1
[2026-04-02 12:11:12] apptainer works
[2026-04-02 12:11:12] Set ATHENA_PROC_NUMBER=12
[2026-04-02 12:11:12] Set ATHENA_CORE_NUMBER=12
[2026-04-02 12:11:12] Starting ATLAS job with PandaID=7072727552
[2026-04-02 12:11:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31418/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-02 14:14:03]  *** The last 200 lines of the pilot log: ***
[2026-04-02 14:14:03] 2026-04-02 14:13:06,475 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-02 14:14:03] 2026-04-02 14:13:06,475 | INFO     | log transfer has been attempted: DONE
[2026-04-02 14:14:03] 2026-04-02 14:13:06,475 | INFO     | job 7072727552 has finished - writing final server update
[2026-04-02 14:14:03] 2026-04-02 14:13:06,475 | INFO     | total number of processed events: 400 (read)
[2026-04-02 14:14:03] 2026-04-02 14:13:06,488 | INFO     | using path: /opt/boinc/instance_homes/boinc_31418/slots/1/PanDA_Pilot-7072727552/memory_monitor_summary.json (trf name=prmon)
[2026-04-02 14:14:03] 2026-04-02 14:13:06,488 | INFO     | extracted standard info from prmon json
[2026-04-02 14:14:03] 2026-04-02 14:13:06,488 | INFO     | extracted standard memory fields from prmon json
[2026-04-02 14:14:03] 2026-04-02 14:13:06,492 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-02 14:14:03] 2026-04-02 14:13:06,492 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-02 14:14:03] 2026-04-02 14:13:06,495 | INFO     | fitting pss+swap vs Time
[2026-04-02 14:14:03] 2026-04-02 14:13:06,498 | INFO     | sum of square deviations: 522502820.0
[2026-04-02 14:14:03] 2026-04-02 14:13:06,499 | INFO     | sum of deviations: -13308035353.999996
[2026-04-02 14:14:03] 2026-04-02 14:13:06,499 | INFO     | mean x (centered): 0.0
[2026-04-02 14:14:03] 2026-04-02 14:13:06,499 | INFO     | mean y: 2728979.243697479
[2026-04-02 14:14:03] 2026-04-02 14:13:06,499 | INFO     | intersect: 2728979.243697479
[2026-04-02 14:14:03] 2026-04-02 14:13:06,499 | INFO     | chi2: 2.9542850108843335
[2026-04-02 14:14:03] 2026-04-02 14:13:06,500 | INFO     | sum of square deviations: 459366752.5
[2026-04-02 14:14:03] 2026-04-02 14:13:06,500 | INFO     | sum of deviations: -3187459840.000005
[2026-04-02 14:14:03] 2026-04-02 14:13:06,501 | INFO     | mean x (centered): 0.0
[2026-04-02 14:14:03] 2026-04-02 14:13:06,504 | INFO     | mean y: 2752712.596491228
[2026-04-02 14:14:03] 2026-04-02 14:13:06,504 | INFO     | intersect: 2752712.596491228
[2026-04-02 14:14:03] 2026-04-02 14:13:06,504 | INFO     | chi2: 2.1408434761586164
[2026-04-02 14:14:03] 2026-04-02 14:13:06,504 | INFO     | current chi2=2.1408434761586164 (change=27.534294481703448 %)
[2026-04-02 14:14:03] 2026-04-02 14:13:06,505 | INFO     | sum of square deviations: 401533110.0
[2026-04-02 14:14:03] 2026-04-02 14:13:06,505 | INFO     | sum of deviations: -1934427241.9999998
[2026-04-02 14:14:03] 2026-04-02 14:13:06,505 | INFO     | mean x (centered): 0.0
[2026-04-02 14:14:03] 2026-04-02 14:13:06,505 | INFO     | mean y: 2756018.8348623854
[2026-04-02 14:14:03] 2026-04-02 14:13:06,506 | INFO     | intersect: 2756018.8348623854
[2026-04-02 14:14:03] 2026-04-02 14:13:06,506 | INFO     | chi2: 2.144769705467539
[2026-04-02 14:14:03] 2026-04-02 14:13:06,506 | INFO     | current chi2=2.144769705467539 (change=-0.18339637402953873 %)
[2026-04-02 14:14:03] 2026-04-02 14:13:06,506 | INFO     | right removable region: 108
[2026-04-02 14:14:03] 2026-04-02 14:13:06,506 | INFO     | sum of square deviations: 459366752.5
[2026-04-02 14:14:03] 2026-04-02 14:13:06,510 | INFO     | sum of deviations: -37157833013.5
[2026-04-02 14:14:03] 2026-04-02 14:13:06,510 | INFO     | mean x (centered): 0.0
[2026-04-02 14:14:03] 2026-04-02 14:13:06,510 | INFO     | mean y: 2785786.4122807016
[2026-04-02 14:14:03] 2026-04-02 14:13:06,511 | INFO     | intersect: 2785786.4122807016
[2026-04-02 14:14:03] 2026-04-02 14:13:06,511 | INFO     | chi2: 1.119264827140725
[2026-04-02 14:14:03] 2026-04-02 14:13:06,511 | INFO     | current chi2=1.119264827140725 (change=62.11385079580778 %)
[2026-04-02 14:14:03] 2026-04-02 14:13:06,511 | INFO     | sum of square deviations: 401533110.0
[2026-04-02 14:14:03] 2026-04-02 14:13:06,512 | INFO     | sum of deviations: -38833763575.0
[2026-04-02 14:14:03] 2026-04-02 14:13:06,512 | INFO     | mean x (centered): 0.0
[2026-04-02 14:14:03] 2026-04-02 14:13:06,512 | INFO     | mean y: 2789967.4495412842
[2026-04-02 14:14:03] 2026-04-02 14:13:06,512 | INFO     | intersect: 2789967.4495412842
[2026-04-02 14:14:03] 2026-04-02 14:13:06,513 | INFO     | chi2: 1.027782123007516
[2026-04-02 14:14:03] 2026-04-02 14:13:06,513 | INFO     | current chi2=1.027782123007516 (change=8.173463680343724 %)
[2026-04-02 14:14:03] 2026-04-02 14:13:06,516 | INFO     | left removable region: 10
[2026-04-02 14:14:03] 2026-04-02 14:13:06,516 | INFO     | sum of square deviations: 291817564.5
[2026-04-02 14:14:03] 2026-04-02 14:13:06,517 | INFO     | sum of deviations: -25892858581.499996
[2026-04-02 14:14:03] 2026-04-02 14:13:06,517 | INFO     | mean x (centered): 0.0
[2026-04-02 14:14:03] 2026-04-02 14:13:06,517 | INFO     | mean y: 2827381.1938775512
[2026-04-02 14:14:03] 2026-04-02 14:13:06,517 | INFO     | intersect: 2827381.1938775512
[2026-04-02 14:14:03] 2026-04-02 14:13:06,517 | INFO     | chi2: 0.14010231809865356
[2026-04-02 14:14:03] 2026-04-02 14:13:06,518 | INFO     | current memory leak: -88.73 B/s (using 98 data points, chi2=0.14)
[2026-04-02 14:14:03] 2026-04-02 14:13:06,518 | INFO     | could have reported an average CPU frequency of 2594 MHz (8 samples)
[2026-04-02 14:14:03] 2026-04-02 14:13:06,518 | INFO     | ..............................
[2026-04-02 14:14:03] 2026-04-02 14:13:06,518 | INFO     | . Timing measurements:
[2026-04-02 14:14:03] 2026-04-02 14:13:06,518 | INFO     | . get job = 0 s
[2026-04-02 14:14:03] 2026-04-02 14:13:06,519 | INFO     | . initial setup = 11 s
[2026-04-02 14:14:03] 2026-04-02 14:13:06,519 | INFO     | . payload setup = 19 s
[2026-04-02 14:14:03] 2026-04-02 14:13:06,522 | INFO     | . stage-in = 0 s
[2026-04-02 14:14:03] 2026-04-02 14:13:06,522 | INFO     | . payload execution = 7240 s
[2026-04-02 14:14:03] 2026-04-02 14:13:06,522 | INFO     | . stage-out = 1 s
[2026-04-02 14:14:03] 2026-04-02 14:13:06,522 | INFO     | . log creation = 0 s
[2026-04-02 14:14:03] 2026-04-02 14:13:06,522 | INFO     | ..............................
[2026-04-02 14:14:03] 2026-04-02 14:13:07,183 | INFO     | 
[2026-04-02 14:14:03] 2026-04-02 14:13:07,183 | INFO     | job summary report
[2026-04-02 14:14:03] 2026-04-02 14:13:07,183 | INFO     | --------------------------------------------------
[2026-04-02 14:14:03] 2026-04-02 14:13:07,183 | INFO     | PanDA job id: 7072727552
[2026-04-02 14:14:03] 2026-04-02 14:13:07,183 | INFO     | task id: 49263191
[2026-04-02 14:14:03] 2026-04-02 14:13:07,184 | INFO     | errors: (none)
[2026-04-02 14:14:03] 2026-04-02 14:13:07,184 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-02 14:14:03] 2026-04-02 14:13:07,184 | INFO     | pilot state: finished 
[2026-04-02 14:14:03] 2026-04-02 14:13:07,184 | INFO     | transexitcode: 0
[2026-04-02 14:14:03] 2026-04-02 14:13:07,184 | INFO     | exeerrorcode: 0
[2026-04-02 14:14:03] 2026-04-02 14:13:07,184 | INFO     | exeerrordiag: 
[2026-04-02 14:14:03] 2026-04-02 14:13:07,184 | INFO     | exitcode: 0
[2026-04-02 14:14:03] 2026-04-02 14:13:07,184 | INFO     | exitmsg: OK
[2026-04-02 14:14:03] 2026-04-02 14:13:07,184 | INFO     | cpuconsumptiontime: 52651 s
[2026-04-02 14:14:03] 2026-04-02 14:13:07,185 | INFO     | nevents: 400
[2026-04-02 14:14:03] 2026-04-02 14:13:07,185 | INFO     | neventsw: 0
[2026-04-02 14:14:03] 2026-04-02 14:13:07,185 | INFO     | pid: 548181
[2026-04-02 14:14:03] 2026-04-02 14:13:07,185 | INFO     | pgrp: 548181
[2026-04-02 14:14:03] 2026-04-02 14:13:07,185 | INFO     | corecount: 12
[2026-04-02 14:14:03] 2026-04-02 14:13:07,185 | INFO     | event service: False
[2026-04-02 14:14:03] 2026-04-02 14:13:07,185 | INFO     | sizes: {0: 2279759, 1: 2280070, 2: 2281672, 13: 2281672, 7263: 2309017, 7264: 2309016, 7265: 2318244, 7267: 2318300, 7269: 2318494}
[2026-04-02 14:14:03] 2026-04-02 14:13:07,185 | INFO     | --------------------------------------------------
[2026-04-02 14:14:03] 2026-04-02 14:13:07,185 | INFO     | 
[2026-04-02 14:14:03] 2026-04-02 14:13:07,185 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31418/slots/1
[2026-04-02 14:14:03] 2026-04-02 14:13:07,222 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,226 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,226 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,226 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,226 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,226 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,226 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,227 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,227 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,227 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,227 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,227 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,227 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,227 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,227 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,228 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,228 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-02 14:14:03] 2026-04-02 14:13:07,228 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,228 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-02 14:14:03] 2026-04-02 14:13:07,228 | INFO     | job 7072727552 has completed (purged errors)
[2026-04-02 14:14:03] 2026-04-02 14:13:07,228 | INFO     | overall cleanup function is called
[2026-04-02 14:14:03] 2026-04-02 14:13:08,241 | INFO     | --- collectZombieJob: --- 10, [548181]
[2026-04-02 14:14:03] 2026-04-02 14:13:08,242 | INFO     | zombie collector waiting for pid 548181
[2026-04-02 14:14:03] 2026-04-02 14:13:08,242 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-02 14:14:03] 2026-04-02 14:13:08,242 | INFO     | collected zombie processes
[2026-04-02 14:14:03] 2026-04-02 14:13:08,242 | INFO     | will attempt to kill all subprocesses of pid=548181
[2026-04-02 14:14:03] 2026-04-02 14:13:08,574 | INFO     | process IDs to be killed: [548181] (in reverse order)
[2026-04-02 14:14:03] 2026-04-02 14:13:08,698 | WARNING  | found no corresponding commands to process id(s)
[2026-04-02 14:14:03] 2026-04-02 14:13:08,699 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-02 14:14:03] 2026-04-02 14:13:08,708 | INFO     | did not find any defunct processes belonging to 548181
[2026-04-02 14:14:03] 2026-04-02 14:13:08,719 | INFO     | did not find any defunct processes belonging to 548181
[2026-04-02 14:14:03] 2026-04-02 14:13:08,719 | INFO     | Ready for new job
[2026-04-02 14:14:03] 2026-04-02 14:13:08,721 | INFO     | **************************************
[2026-04-02 14:14:03] 2026-04-02 14:13:08,724 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-02 14:14:03] 2026-04-02 14:13:08,724 | INFO     | **************************************
[2026-04-02 14:14:03] 2026-04-02 14:13:08,724 | INFO     | 
[2026-04-02 14:14:03] 2026-04-02 14:13:08,726 | INFO     | architecture information:
[2026-04-02 14:14:03] 2026-04-02 14:13:08,730 | INFO     | executing command: cat /etc/os-release
[2026-04-02 14:14:03] 2026-04-02 14:13:08,751 | INFO     | cat /etc/os-release:
[2026-04-02 14:14:03] NAME="CentOS Linux"
[2026-04-02 14:14:03] VERSION="7 (Core)"
[2026-04-02 14:14:03] ID="centos"
[2026-04-02 14:14:03] ID_LIKE="rhel fedora"
[2026-04-02 14:14:03] VERSION_ID="7"
[2026-04-02 14:14:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-02 14:14:03] ANSI_COLOR="0;31"
[2026-04-02 14:14:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-02 14:14:03] HOME_URL="https://www.centos.org/"
[2026-04-02 14:14:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-02 14:14:03] 
[2026-04-02 14:14:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-02 14:14:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-02 14:14:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-02 14:14:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-02 14:14:03] 
[2026-04-02 14:14:03] 2026-04-02 14:13:08,752 | INFO     | **************************************
[2026-04-02 14:14:03] 2026-04-02 14:13:09,256 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/1
[2026-04-02 14:14:03] 2026-04-02 14:13:09,281 | INFO     | sufficient remaining disk space (429816545280 B)
[2026-04-02 14:14:03] 2026-04-02 14:13:09,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-02 14:14:03] 2026-04-02 14:13:09,282 | INFO     | current server update state: UPDATING_FINAL
[2026-04-02 14:14:03] 2026-04-02 14:13:09,282 | INFO     | update_server=False
[2026-04-02 14:14:03] 2026-04-02 14:13:09,282 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-02 14:14:03] 2026-04-02 14:13:09,282 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-02 14:14:03] 2026-04-02 14:13:09,459 | INFO     | all data control threads have been joined
[2026-04-02 14:14:03] 2026-04-02 14:13:09,730 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-02 14:14:03] 2026-04-02 14:13:09,730 | INFO     | aborting loop
[2026-04-02 14:14:03] 2026-04-02 14:13:09,940 | INFO     | all payload control threads have been joined
[2026-04-02 14:14:03] 2026-04-02 14:13:10,220 | INFO     | all job control threads have been joined
[2026-04-02 14:14:03] 2026-04-02 14:13:10,288 | INFO     | [job] retrieve thread has finished
[2026-04-02 14:14:03] 2026-04-02 14:13:10,447 | INFO     | [job] create_data_payload thread has finished
[2026-04-02 14:14:03] 2026-04-02 14:13:10,464 | INFO     | [data] control thread has finished
[2026-04-02 14:14:03] 2026-04-02 14:13:10,643 | INFO     | [payload] validate_post thread has finished
[2026-04-02 14:14:03] 2026-04-02 14:13:10,736 | INFO     | [job] job monitor thread has finished
[2026-04-02 14:14:03] 2026-04-02 14:13:10,863 | INFO     | [payload] validate_pre thread has finished
[2026-04-02 14:14:03] 2026-04-02 14:13:10,868 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-02 14:14:03] 2026-04-02 14:13:10,945 | INFO     | [payload] control thread has finished
[2026-04-02 14:14:03] 2026-04-02 14:13:11,225 | INFO     | [job] control thread has finished
[2026-04-02 14:14:03] 2026-04-02 14:13:11,280 | INFO     | [payload] failed_post thread has finished
[2026-04-02 14:14:03] 2026-04-02 14:13:11,287 | INFO     | [data] copytool_out thread has finished
[2026-04-02 14:14:03] 2026-04-02 14:13:11,351 | INFO     | [payload] execute_payloads thread has finished
[2026-04-02 14:14:03] 2026-04-02 14:13:11,616 | INFO     | [data] copytool_in thread has finished
[2026-04-02 14:14:03] 2026-04-02 14:13:11,616 | INFO     | [job] validate thread has finished
[2026-04-02 14:14:03] 2026-04-02 14:13:11,704 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-02 14:14:03] 2026-04-02 14:13:12,709 | INFO     | [job] queue monitor thread has finished
[2026-04-02 14:14:03] 2026-04-02 14:13:14,876 | INFO     | [data] queue_monitor thread has finished
[2026-04-02 14:14:03] 2026-04-02 14:13:19,759 | INFO     | job.realtimelogging is not enabled
[2026-04-02 14:14:03] 2026-04-02 14:13:20,764 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-02 14:14:03] 2026-04-02 14:13:39,701 | INFO     | PID=543607 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-02 14:14:03] 2026-04-02 14:13:39,701 | INFO     | .. there are 4 such processes running
[2026-04-02 14:14:03] 2026-04-02 14:13:39,702 | INFO     | found 0 job(s) in 20 queues
[2026-04-02 14:14:03] 2026-04-02 14:13:39,702 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-02 14:14:03] 2026-04-02 14:13:39,702 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-02 14:14:03] 2026-04-02 14:13:56,716 | INFO     | [monitor] cgroup control has ended
[2026-04-02 14:14:03] 2026-04-02 14:13:58,202 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126837791553344)>', '<ExcThread(monitor, started 126837145458432)>']
[2026-04-02 14:14:03] 2026-04-02 14:13:58,799 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-02 14:14:03] 2026-04-02 14:13:58,799 | INFO     | [monitor] control thread has ended
[2026-04-02 14:14:03] 2026-04-02 14:14:03,228 | INFO     | all workflow threads have been joined
[2026-04-02 14:14:03] 2026-04-02 14:14:03,229 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-02 14:14:03] 2026-04-02 14:14:03,229 | INFO     | traces error code: 0
[2026-04-02 14:14:03] 2026-04-02 14:14:03,229 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-02 14:14:03] 2026-04-02 14:14:03,436 [wrapper] ==== pilot stdout END ====
[2026-04-02 14:14:03] 2026-04-02 14:14:03,442 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-02 14:14:03] 2026-04-02 14:14:03,447 [wrapper] pilotpid: 543607
[2026-04-02 14:14:03] 2026-04-02 14:14:03,454 [wrapper] Pilot exit status: 0
[2026-04-02 14:14:03] 2026-04-02 14:14:03,473 [wrapper] pandaids: 7072727552
[2026-04-02 14:14:03] 2026-04-02 14:14:03,549 [wrapper] cleanup supervisor_pilot  593571 543608
[2026-04-02 14:14:03] ./runpilot2-wrapper.sh: line 616: 593571 Terminated              sleep 900
[2026-04-02 14:14:03] 2026-04-02 14:14:03,558 [wrapper] Test setup, not cleaning
[2026-04-02 14:14:03] 2026-04-02 14:14:03,563 [wrapper] apfmon messages muted
[2026-04-02 14:14:03] 2026-04-02 14:14:03,573 [wrapper] ==== wrapper stdout END ====
[2026-04-02 14:14:03] 2026-04-02 14:14:03,578 [wrapper] ==== wrapper stderr END ====
[2026-04-02 14:14:03]  *** Error codes and diagnostics ***
[2026-04-02 14:14:03]     "exeErrorCode": 0,
[2026-04-02 14:14:03]     "pilotErrorCode": 0,
[2026-04-02 14:14:03]  *** Listing of results directory ***
[2026-04-02 14:14:03] total 417760
[2026-04-02 14:14:03] -rw-r--r-- 1 boinc boinc    644034 M&#195;&#164;r 31 04:42 pilot3.tar.gz
[2026-04-02 14:14:03] -rwx------ 1 boinc boinc     36322 M&#195;&#164;r 31 04:44 runpilot2-wrapper.sh
[2026-04-02 14:14:03] -rw-r--r-- 1 boinc boinc      5118 M&#195;&#164;r 31 04:44 queuedata.json
[2026-04-02 14:14:03] -rw-rw-r-- 1 boinc boinc       100 Apr  2 12:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-02 14:14:03] -rwxr-xr-x 1 boinc boinc      7986 Apr  2 12:11 run_atlas
[2026-04-02 14:14:03] -rw-rw-r-- 1 boinc boinc       105 Apr  2 12:11 job.xml
[2026-04-02 14:14:03] -rw-r--r-- 2 boinc boinc 226407685 Apr  2 12:11 EVNT.49263189._000288.pool.root.1
[2026-04-02 14:14:03] -rw-r--r-- 2 boinc boinc     15845 Apr  2 12:11 start_atlas.sh
[2026-04-02 14:14:03] drwxrwx--x 2 boinc boinc      4096 Apr  2 12:11 shared
[2026-04-02 14:14:03] -rw-r--r-- 2 boinc boinc    656756 Apr  2 12:11 input.tar.gz
[2026-04-02 14:14:03] -rw-rw-r-- 1 boinc boinc      8936 Apr  2 12:11 init_data.xml
[2026-04-02 14:14:03] -rw-rw-r-- 1 boinc boinc         0 Apr  2 12:11 boinc_setup_complete
[2026-04-02 14:14:03] -rw-rw-r-- 1 boinc boinc         0 Apr  2 12:11 boinc_lockfile
[2026-04-02 14:14:03] -rw-rw-r-- 1 boinc boinc      2577 Apr  2 12:11 pandaJob.out
[2026-04-02 14:14:03] -rw------- 1 boinc boinc   1004484 Apr  2 12:11 agis_schedconf.cvmfs.json
[2026-04-02 14:14:03] -rw------- 1 boinc boinc   1511579 Apr  2 12:11 agis_ddmendpoints.agis.ALL.json
[2026-04-02 14:14:03] -rw------- 1 boinc boinc       431 Apr  2 12:11 workernode_map.json
[2026-04-02 14:14:03] drwx------ 5 boinc boinc      4096 Apr  2 12:11 pilot3
[2026-04-02 14:14:03] -rw------- 1 boinc boinc 195101942 Apr  2 14:12 HITS.49263191._012306.pool.root.1
[2026-04-02 14:14:03] -rw-rw-r-- 1 boinc boinc       529 Apr  2 14:12 boinc_task_state.xml
[2026-04-02 14:14:03] -rw------- 1 boinc boinc      1023 Apr  2 14:12 memory_monitor_summary.json
[2026-04-02 14:14:03] -rw------- 1 boinc boinc        95 Apr  2 14:12 pilot_heartbeat.json
[2026-04-02 14:14:03] -rw------- 1 boinc boinc    382223 Apr  2 14:13 log.49263191._012306.job.log.tgz.1
[2026-04-02 14:14:03] -rw------- 1 boinc boinc      6355 Apr  2 14:13 heartbeat_new.json
[2026-04-02 14:14:03] -rw------- 1 boinc boinc      6246 Apr  2 14:13 heartbeat.json
[2026-04-02 14:14:03] -rw-rw-r-- 1 boinc boinc      8192 Apr  2 14:14 boinc_mmap_file
[2026-04-02 14:14:03] -rw-rw-r-- 1 boinc boinc        27 Apr  2 14:14 wrapper_checkpoint.txt
[2026-04-02 14:14:03] -rw------- 1 boinc boinc      4913 Apr  2 14:14 pilotlog.txt
[2026-04-02 14:14:03] -rw------- 1 boinc boinc    718970 Apr  2 14:14 log.49263191._012306.job.log.1
[2026-04-02 14:14:03] -rw------- 1 boinc boinc       357 Apr  2 14:14 output.list
[2026-04-02 14:14:03] -rw-rw-r-- 1 boinc boinc       620 Apr  2 14:14 runtime_log
[2026-04-02 14:14:03] -rw------- 1 boinc boinc   1116160 Apr  2 14:14 result.tar.gz
[2026-04-02 14:14:03] -rw-rw-r-- 1 boinc boinc      9171 Apr  2 14:14 runtime_log.err
[2026-04-02 14:14:03] -rw------- 1 boinc boinc       654 Apr  2 14:14 ArfMDma8fR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmSzPKDmHPY6Jo.diag
[2026-04-02 14:14:03] -rw-rw-r-- 1 boinc boinc     20761 Apr  2 14:14 stderr.txt
[2026-04-02 14:14:03] HITS file was successfully produced:
[2026-04-02 14:14:03] -rw------- 1 boinc boinc 195101942 Apr  2 14:12 shared/HITS.pool.root.1
[2026-04-02 14:14:03]  *** Contents of shared directory: ***
[2026-04-02 14:14:03] total 413396
[2026-04-02 14:14:03] -rw-r--r-- 2 boinc boinc 226407685 Apr  2 12:11 ATLAS.root_0
[2026-04-02 14:14:03] -rw-r--r-- 2 boinc boinc     15845 Apr  2 12:11 start_atlas.sh
[2026-04-02 14:14:03] -rw-r--r-- 2 boinc boinc    656756 Apr  2 12:11 input.tar.gz
[2026-04-02 14:14:03] -rw------- 1 boinc boinc 195101942 Apr  2 14:12 HITS.pool.root.1
[2026-04-02 14:14:03] -rw------- 1 boinc boinc   1116160 Apr  2 14:14 result.tar.gz
14:14:04 (539428): run_atlas exited; CPU time 52734.942220
14:14:04 (539428): called boinc_finish(0)

</stderr_txt>
]]>

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