Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:49:24 (5464): wrapper (7.7.26015): starting
19:49:24 (5464): wrapper: running run_atlas (--nthreads 8)
[2026-03-31 19:49:24] Arguments: --nthreads 8
[2026-03-31 19:49:24] Threads: 8
[2026-03-31 19:49:24] Checking for CVMFS
[2026-03-31 19:49:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 19:49:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 19:49:27] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 19:49:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 19:49:28] 2.11.2.0 23466 152359 140668 157925 2 54 23485974 25165824 4688 130560 157 46859816 99.817 35121015 1041 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-31 19:49:28] CVMFS is ok
[2026-03-31 19:49:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 19:49:28] Checking for apptainer binary...
[2026-03-31 19:49:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 19:49:28] Running /usr/bin/apptainer --version
[2026-03-31 19:49:28] apptainer version 1.3.2-1.el7
[2026-03-31 19:49:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 19:49:42] cg-vwn389.simple-grid.lan
[2026-03-31 19:49:42] apptainer works
[2026-03-31 19:49:42] Set ATHENA_PROC_NUMBER=8
[2026-03-31 19:49:42] Set ATHENA_CORE_NUMBER=8
[2026-03-31 19:49:42] Starting ATLAS job with PandaID=7072963858
[2026-03-31 19:49:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 00:15:22]  *** The last 200 lines of the pilot log: ***
[2026-04-01 00:15:22] 2026-03-31 22:14:21,091 | INFO     | log transfer has been attempted: DONE
[2026-04-01 00:15:22] 2026-03-31 22:14:21,091 | INFO     | job 7072963858 has finished - writing final server update
[2026-04-01 00:15:22] 2026-03-31 22:14:21,092 | INFO     | total number of processed events: 400 (read)
[2026-04-01 00:15:22] 2026-03-31 22:14:21,094 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-7072963858/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 00:15:22] 2026-03-31 22:14:21,095 | INFO     | extracted standard info from prmon json
[2026-04-01 00:15:22] 2026-03-31 22:14:21,095 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 00:15:22] 2026-03-31 22:14:21,095 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 00:15:22] 2026-03-31 22:14:21,095 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 00:15:22] 2026-03-31 22:14:21,101 | INFO     | fitting pss+swap vs Time
[2026-04-01 00:15:22] 2026-03-31 22:14:21,101 | INFO     | sum of square deviations: 4903347750.0
[2026-04-01 00:15:22] 2026-03-31 22:14:21,104 | INFO     | sum of deviations: 123635846515.99998
[2026-04-01 00:15:22] 2026-03-31 22:14:21,104 | INFO     | mean x (centered): 0.0
[2026-04-01 00:15:22] 2026-03-31 22:14:21,104 | INFO     | mean y: 2420731.701195219
[2026-04-01 00:15:22] 2026-03-31 22:14:21,104 | INFO     | intersect: 2420731.701195219
[2026-04-01 00:15:22] 2026-03-31 22:14:21,105 | INFO     | chi2: 7.049506514569971
[2026-04-01 00:15:22] 2026-03-31 22:14:21,105 | INFO     | sum of square deviations: 4616114457.5
[2026-04-01 00:15:22] 2026-03-31 22:14:21,107 | INFO     | sum of deviations: 137477613509.0
[2026-04-01 00:15:22] 2026-03-31 22:14:21,108 | INFO     | mean x (centered): 0.0
[2026-04-01 00:15:22] 2026-03-31 22:14:21,108 | INFO     | mean y: 2427938.276422764
[2026-04-01 00:15:22] 2026-03-31 22:14:21,108 | INFO     | intersect: 2427938.276422764
[2026-04-01 00:15:22] 2026-03-31 22:14:21,108 | INFO     | chi2: 6.3306692600608825
[2026-04-01 00:15:22] 2026-03-31 22:14:21,109 | INFO     | current chi2=6.3306692600608825 (change=10.196986881612071 %)
[2026-04-01 00:15:22] 2026-03-31 22:14:21,109 | INFO     | right removable region: 245
[2026-04-01 00:15:22] 2026-03-31 22:14:21,109 | INFO     | sum of square deviations: 4616114457.5
[2026-04-01 00:15:22] 2026-03-31 22:14:21,111 | INFO     | sum of deviations: 37675977780.00001
[2026-04-01 00:15:22] 2026-03-31 22:14:21,111 | INFO     | mean x (centered): 0.0
[2026-04-01 00:15:22] 2026-03-31 22:14:21,112 | INFO     | mean y: 2466333.9593495936
[2026-04-01 00:15:22] 2026-03-31 22:14:21,112 | INFO     | intersect: 2466333.9593495936
[2026-04-01 00:15:22] 2026-03-31 22:14:21,112 | INFO     | chi2: 2.3010614587280935
[2026-04-01 00:15:22] 2026-03-31 22:14:21,112 | INFO     | current chi2=2.3010614587280935 (change=67.3585455382977 %)
[2026-04-01 00:15:22] 2026-03-31 22:14:21,113 | INFO     | sum of square deviations: 4340323240.0
[2026-04-01 00:15:22] 2026-03-31 22:14:21,116 | INFO     | sum of deviations: -6850887064.0
[2026-04-01 00:15:22] 2026-03-31 22:14:21,116 | INFO     | mean x (centered): 0.0
[2026-04-01 00:15:22] 2026-03-31 22:14:21,116 | INFO     | mean y: 2490813.4398340248
[2026-04-01 00:15:22] 2026-03-31 22:14:21,116 | INFO     | intersect: 2490813.4398340248
[2026-04-01 00:15:22] 2026-03-31 22:14:21,117 | INFO     | chi2: 0.8202996433859114
[2026-04-01 00:15:22] 2026-03-31 22:14:21,117 | INFO     | current chi2=0.8202996433859114 (change=64.35125014699389 %)
[2026-04-01 00:15:22] 2026-03-31 22:14:21,118 | INFO     | sum of square deviations: 4075741535.0
[2026-04-01 00:15:22] 2026-03-31 22:14:21,120 | INFO     | sum of deviations: -8011605983.0
[2026-04-01 00:15:22] 2026-03-31 22:14:21,120 | INFO     | mean x (centered): 0.0
[2026-04-01 00:15:22] 2026-03-31 22:14:21,120 | INFO     | mean y: 2491447.194915254
[2026-04-01 00:15:22] 2026-03-31 22:14:21,120 | INFO     | intersect: 2491447.194915254
[2026-04-01 00:15:22] 2026-03-31 22:14:21,121 | INFO     | chi2: 0.8013384912962104
[2026-04-01 00:15:22] 2026-03-31 22:14:21,121 | INFO     | current chi2=0.8013384912962104 (change=2.3114909585277914 %)
[2026-04-01 00:15:22] 2026-03-31 22:14:21,121 | INFO     | left removable region: 15
[2026-04-01 00:15:22] 2026-03-31 22:14:21,122 | INFO     | sum of square deviations: 3772712597.5
[2026-04-01 00:15:22] 2026-03-31 22:14:21,124 | INFO     | sum of deviations: 7501043669.0
[2026-04-01 00:15:22] 2026-03-31 22:14:21,124 | INFO     | mean x (centered): 0.0
[2026-04-01 00:15:22] 2026-03-31 22:14:21,124 | INFO     | mean y: 2500613.4260869566
[2026-04-01 00:15:22] 2026-03-31 22:14:21,124 | INFO     | intersect: 2500613.4260869566
[2026-04-01 00:15:22] 2026-03-31 22:14:21,125 | INFO     | chi2: 0.012758805431923544
[2026-04-01 00:15:22] 2026-03-31 22:14:21,125 | INFO     | current memory leak: 1.99 B/s (using 230 data points, chi2=0.01)
[2026-04-01 00:15:22] 2026-03-31 22:14:21,125 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-01 00:15:22] 2026-03-31 22:14:21,126 | INFO     | ..............................
[2026-04-01 00:15:22] 2026-03-31 22:14:21,126 | INFO     | . Timing measurements:
[2026-04-01 00:15:22] 2026-03-31 22:14:21,126 | INFO     | . get job = 0 s
[2026-04-01 00:15:22] 2026-03-31 22:14:21,126 | INFO     | . initial setup = 99 s
[2026-04-01 00:15:22] 2026-03-31 22:14:21,126 | INFO     | . payload setup = 170 s
[2026-04-01 00:15:22] 2026-03-31 22:14:21,126 | INFO     | . stage-in = 0 s
[2026-04-01 00:15:22] 2026-03-31 22:14:21,126 | INFO     | . payload execution = 15384 s
[2026-04-01 00:15:22] 2026-03-31 22:14:21,126 | INFO     | . stage-out = 3 s
[2026-04-01 00:15:22] 2026-03-31 22:14:21,127 | INFO     | . log creation = 1 s
[2026-04-01 00:15:22] 2026-03-31 22:14:21,127 | INFO     | ..............................
[2026-04-01 00:15:22] 2026-03-31 22:14:21,370 | INFO     | PID=9609 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-01 00:15:22] 2026-03-31 22:14:21,371 | INFO     | .. there are 9 such processes running
[2026-04-01 00:15:22] 2026-03-31 22:14:21,632 | INFO     | 
[2026-04-01 00:15:22] 2026-03-31 22:14:21,632 | INFO     | job summary report
[2026-04-01 00:15:22] 2026-03-31 22:14:21,632 | INFO     | --------------------------------------------------
[2026-04-01 00:15:22] 2026-03-31 22:14:21,632 | INFO     | PanDA job id: 7072963858
[2026-04-01 00:15:22] 2026-03-31 22:14:21,633 | INFO     | task id: 49263208
[2026-04-01 00:15:22] 2026-03-31 22:14:21,633 | INFO     | errors: (none)
[2026-04-01 00:15:22] 2026-03-31 22:14:21,633 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 00:15:22] 2026-03-31 22:14:21,633 | INFO     | pilot state: finished 
[2026-04-01 00:15:22] 2026-03-31 22:14:21,633 | INFO     | transexitcode: 0
[2026-04-01 00:15:22] 2026-03-31 22:14:21,633 | INFO     | exeerrorcode: 0
[2026-04-01 00:15:22] 2026-03-31 22:14:21,633 | INFO     | exeerrordiag: 
[2026-04-01 00:15:22] 2026-03-31 22:14:21,633 | INFO     | exitcode: 0
[2026-04-01 00:15:22] 2026-03-31 22:14:21,633 | INFO     | exitmsg: OK
[2026-04-01 00:15:22] 2026-03-31 22:14:21,634 | INFO     | cpuconsumptiontime: 59102 s
[2026-04-01 00:15:22] 2026-03-31 22:14:21,634 | INFO     | nevents: 400
[2026-04-01 00:15:22] 2026-03-31 22:14:21,634 | INFO     | neventsw: 0
[2026-04-01 00:15:22] 2026-03-31 22:14:21,634 | INFO     | pid: 14127
[2026-04-01 00:15:22] 2026-03-31 22:14:21,634 | INFO     | pgrp: 14127
[2026-04-01 00:15:22] 2026-03-31 22:14:21,634 | INFO     | corecount: 8
[2026-04-01 00:15:22] 2026-03-31 22:14:21,634 | INFO     | event service: False
[2026-04-01 00:15:22] 2026-03-31 22:14:21,634 | INFO     | sizes: {0: 2279735, 1: 2280046, 2: 2281648, 12: 2281648, 15559: 2312781, 15563: 2321965, 15564: 2322103}
[2026-04-01 00:15:22] 2026-03-31 22:14:21,634 | INFO     | --------------------------------------------------
[2026-04-01 00:15:22] 2026-03-31 22:14:21,634 | INFO     | 
[2026-04-01 00:15:22] 2026-03-31 22:14:21,635 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2026-04-01 00:15:22] 2026-03-31 22:14:22,075 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,076 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,076 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,076 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,076 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,076 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,076 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,077 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,077 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,077 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,077 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,077 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,077 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,077 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,077 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,078 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,078 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,078 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 00:15:22] 2026-03-31 22:14:22,078 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,078 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 00:15:22] 2026-03-31 22:14:22,078 | INFO     | job 7072963858 has completed (purged errors)
[2026-04-01 00:15:22] 2026-03-31 22:14:22,078 | INFO     | overall cleanup function is called
[2026-04-01 00:15:22] 2026-03-31 22:14:23,088 | INFO     | --- collectZombieJob: --- 10, [14127]
[2026-04-01 00:15:22] 2026-03-31 22:14:23,088 | INFO     | zombie collector waiting for pid 14127
[2026-04-01 00:15:22] 2026-03-31 22:14:23,088 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 00:15:22] 2026-03-31 22:14:23,089 | INFO     | collected zombie processes
[2026-04-01 00:15:22] 2026-03-31 22:14:23,089 | INFO     | will attempt to kill all subprocesses of pid=14127
[2026-04-01 00:15:22] 2026-03-31 22:14:23,239 | INFO     | process IDs to be killed: [14127] (in reverse order)
[2026-04-01 00:15:22] 2026-03-31 22:14:24,069 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 00:15:22] 2026-03-31 22:14:24,070 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 00:15:22] 2026-03-31 22:14:24,073 | INFO     | did not find any defunct processes belonging to 14127
[2026-04-01 00:15:22] 2026-03-31 22:14:24,076 | INFO     | did not find any defunct processes belonging to 14127
[2026-04-01 00:15:22] 2026-03-31 22:14:24,076 | INFO     | Ready for new job
[2026-04-01 00:15:22] 2026-03-31 22:14:24,078 | INFO     | **************************************
[2026-04-01 00:15:22] 2026-03-31 22:14:24,078 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-01 00:15:22] 2026-03-31 22:14:24,078 | INFO     | **************************************
[2026-04-01 00:15:22] 2026-03-31 22:14:24,078 | INFO     | 
[2026-04-01 00:15:22] 2026-03-31 22:14:24,079 | INFO     | pilot is running in a VM
[2026-04-01 00:15:22] 2026-03-31 22:14:24,079 | INFO     | architecture information:
[2026-04-01 00:15:22] 2026-03-31 22:14:24,083 | INFO     | executing command: cat /etc/os-release
[2026-04-01 00:15:22] 2026-03-31 22:14:24,332 | INFO     | cat /etc/os-release:
[2026-04-01 00:15:22] NAME="CentOS Linux"
[2026-04-01 00:15:22] VERSION="7 (Core)"
[2026-04-01 00:15:22] ID="centos"
[2026-04-01 00:15:22] ID_LIKE="rhel fedora"
[2026-04-01 00:15:22] VERSION_ID="7"
[2026-04-01 00:15:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 00:15:22] ANSI_COLOR="0;31"
[2026-04-01 00:15:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 00:15:22] HOME_URL="https://www.centos.org/"
[2026-04-01 00:15:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 00:15:22] 
[2026-04-01 00:15:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 00:15:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 00:15:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 00:15:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 00:15:22] 
[2026-04-01 00:15:22] 2026-03-31 22:14:24,332 | INFO     | **************************************
[2026-04-01 00:15:22] 2026-03-31 22:14:24,835 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2026-04-01 00:15:22] 2026-03-31 22:14:25,110 | INFO     | sufficient remaining disk space (496677945344 B)
[2026-04-01 00:15:22] 2026-03-31 22:14:25,110 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 00:15:22] 2026-03-31 22:14:25,110 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 00:15:22] 2026-03-31 22:14:25,110 | INFO     | update_server=False
[2026-04-01 00:15:22] 2026-03-31 22:14:25,110 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-01 00:15:22] 2026-03-31 22:14:25,111 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 00:15:22] 2026-03-31 22:14:25,111 | INFO     | aborting loop
[2026-04-01 00:15:22] 2026-03-31 22:14:25,894 | INFO     | all data control threads have been joined
[2026-04-01 00:15:22] 2026-03-31 22:14:26,116 | INFO     | [job] retrieve thread has finished
[2026-04-01 00:15:22] 2026-03-31 22:14:26,119 | INFO     | [job] job monitor thread has finished
[2026-04-01 00:15:22] 2026-03-31 22:14:26,186 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 00:15:22] 2026-03-31 22:14:26,230 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 00:15:22] 2026-03-31 22:14:26,267 | INFO     | [payload] failed_post thread has finished
[2026-04-01 00:15:22] 2026-03-31 22:14:26,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 00:15:22] 2026-03-31 22:14:26,395 | INFO     | [job] validate thread has finished
[2026-04-01 00:15:22] 2026-03-31 22:14:26,431 | INFO     | all job control threads have been joined
[2026-04-01 00:15:22] 2026-03-31 22:14:26,586 | INFO     | all payload control threads have been joined
[2026-04-01 00:15:22] 2026-03-31 22:14:26,900 | INFO     | [data] control thread has finished
[2026-04-01 00:15:22] 2026-03-31 22:14:26,920 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 00:15:22] 2026-03-31 22:14:26,924 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 00:15:22] 2026-03-31 22:14:26,974 | INFO     | [payload] validate_post thread has finished
[2026-04-01 00:15:22] 2026-03-31 22:14:26,997 | INFO     | [data] copytool_in thread has finished
[2026-04-01 00:15:22] 2026-03-31 22:14:27,065 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 00:15:22] 2026-03-31 22:14:27,098 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 00:15:22] 2026-03-31 22:14:27,282 | INFO     | [job] queue monitor thread has finished
[2026-04-01 00:15:22] 2026-03-31 22:14:27,436 | INFO     | [job] control thread has finished
[2026-04-01 00:15:22] 2026-03-31 22:14:27,592 | INFO     | [payload] control thread has finished
[2026-04-01 00:15:22] 2026-03-31 22:14:28,193 | INFO     | [data] copytool_out thread has finished
[2026-04-01 00:15:22] 2026-03-31 22:14:31,107 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 00:15:22] 2026-03-31 22:14:53,549 | INFO     | PID=9609 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-01 00:15:22] 2026-03-31 22:14:53,549 | INFO     | .. there are 9 such processes running
[2026-04-01 00:15:22] 2026-03-31 22:14:53,551 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 00:15:22] 2026-03-31 22:14:53,551 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 00:15:22] 2026-03-31 22:14:53,551 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 00:15:22] 2026-03-31 22:15:11,720 | INFO     | [monitor] cgroup control has ended
[2026-04-01 00:15:22] 2026-03-31 22:15:12,225 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140714517784384)>', '<ExcThread(monitor, started 140714000250624)>']
[2026-04-01 00:15:22] 2026-03-31 22:15:12,663 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 00:15:22] 2026-03-31 22:15:12,663 | INFO     | [monitor] control thread has ended
[2026-04-01 00:15:22] 2026-03-31 22:15:17,251 | INFO     | all workflow threads have been joined
[2026-04-01 00:15:22] 2026-03-31 22:15:17,251 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 00:15:22] 2026-03-31 22:15:17,251 | INFO     | traces error code: 0
[2026-04-01 00:15:22] 2026-03-31 22:15:17,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 00:15:22] 2026-03-31 22:15:17,606 [wrapper] ==== pilot stdout END ====
[2026-04-01 00:15:22] 2026-03-31 22:15:17,694 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 00:15:22] 2026-03-31 22:15:17,792 [wrapper] pilotpid: 9609
[2026-04-01 00:15:22] 2026-03-31 22:15:17,894 [wrapper] Pilot exit status: 0
[2026-04-01 00:15:22] 2026-03-31 22:15:18,386 [wrapper] pandaids: 7072963858
[2026-04-01 00:15:22] 2026-03-31 22:15:19,215 [wrapper] cleanup supervisor_pilot 22265 9610
[2026-04-01 00:15:22] 2026-03-31 22:15:19,318 [wrapper] Test setup, not cleaning
[2026-04-01 00:15:22] 2026-03-31 22:15:19,425 [wrapper] apfmon messages muted
[2026-04-01 00:15:22] 2026-03-31 22:15:19,534 [wrapper] ==== wrapper stdout END ====
[2026-04-01 00:15:22] 2026-03-31 22:15:19,642 [wrapper] ==== wrapper stderr END ====
[2026-04-01 00:15:22]  *** Error codes and diagnostics ***
[2026-04-01 00:15:22]     "exeErrorCode": 0,
[2026-04-01 00:15:22]     "pilotErrorCode": 0,
[2026-04-01 00:15:22]  *** Listing of results directory ***
[2026-04-01 00:15:22] total 414764
[2026-04-01 00:15:22] -rw-r--r--. 1 boinc boinc    644034 Mar 31 07:48 pilot3.tar.gz
[2026-04-01 00:15:22] -rwx------. 1 boinc boinc     36322 Mar 31 07:57 runpilot2-wrapper.sh
[2026-04-01 00:15:22] -rw-r--r--. 1 boinc boinc      5118 Mar 31 07:59 queuedata.json
[2026-04-01 00:15:22] -rw-r--r--. 1 boinc boinc       100 Mar 31 19:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 00:15:22] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 19:49 run_atlas
[2026-04-01 00:15:22] -rw-r--r--. 1 boinc boinc       105 Mar 31 19:49 job.xml
[2026-04-01 00:15:22] -rw-r--r--. 1 boinc boinc      6391 Mar 31 19:49 init_data.xml
[2026-04-01 00:15:22] -rw-r--r--. 2 boinc boinc 222379858 Mar 31 19:49 EVNT.49263206._000527.pool.root.1
[2026-04-01 00:15:22] -rw-r--r--. 2 boinc boinc     15845 Mar 31 19:49 start_atlas.sh
[2026-04-01 00:15:22] drwxrwx--x. 2 boinc boinc        68 Mar 31 19:49 shared
[2026-04-01 00:15:22] -rw-r--r--. 2 boinc boinc    656753 Mar 31 19:49 input.tar.gz
[2026-04-01 00:15:22] -rw-r--r--. 1 boinc boinc         0 Mar 31 19:49 boinc_lockfile
[2026-04-01 00:15:22] -rw-r--r--. 1 boinc boinc      2575 Mar 31 19:49 pandaJob.out
[2026-04-01 00:15:22] -rw-------. 1 boinc boinc       415 Mar 31 19:54 workernode_map.json
[2026-04-01 00:15:22] -rw-------. 1 boinc boinc   1005014 Mar 31 19:54 agis_schedconf.cvmfs.json
[2026-04-01 00:15:22] drwx------. 5 boinc boinc      4096 Mar 31 19:54 pilot3
[2026-04-01 00:15:22] -rw-------. 1 boinc boinc 194614687 Apr  1 00:13 HITS.49263208._011937.pool.root.1
[2026-04-01 00:15:22] -rw-r--r--. 1 boinc boinc       531 Apr  1 00:13 boinc_task_state.xml
[2026-04-01 00:15:22] -rw-------. 1 boinc boinc      1013 Apr  1 00:14 memory_monitor_summary.json
[2026-04-01 00:15:22] -rw-------. 1 boinc boinc   1511579 Apr  1 00:14 agis_ddmendpoints.agis.ALL.json
[2026-04-01 00:15:22] -rw-------. 1 boinc boinc    404503 Apr  1 00:14 log.49263208._011937.job.log.tgz.1
[2026-04-01 00:15:22] -rw-------. 1 boinc boinc      6347 Apr  1 00:14 heartbeat_new.json
[2026-04-01 00:15:22] -rw-------. 1 boinc boinc      6238 Apr  1 00:14 heartbeat.json
[2026-04-01 00:15:22] -rw-------. 1 boinc boinc        95 Apr  1 00:14 pilot_heartbeat.json
[2026-04-01 00:15:22] -rw-r--r--. 1 boinc boinc      8192 Apr  1 00:15 boinc_mmap_file
[2026-04-01 00:15:22] -rw-r--r--. 1 boinc boinc        28 Apr  1 00:15 wrapper_checkpoint.txt
[2026-04-01 00:15:22] -rw-------. 1 boinc boinc      4879 Apr  1 00:15 pilotlog.txt
[2026-04-01 00:15:22] -rw-------. 1 boinc boinc   1429859 Apr  1 00:15 log.49263208._011937.job.log.1
[2026-04-01 00:15:22] -rw-------. 1 boinc boinc       357 Apr  1 00:15 output.list
[2026-04-01 00:15:22] -rw-r--r--. 1 boinc boinc       620 Apr  1 00:15 runtime_log
[2026-04-01 00:15:22] -rw-------. 1 boinc boinc   1853440 Apr  1 00:15 result.tar.gz
[2026-04-01 00:15:22] -rw-r--r--. 1 boinc boinc      8832 Apr  1 00:15 runtime_log.err
[2026-04-01 00:15:22] -rw-------. 1 boinc boinc       656 Apr  1 00:15 jtpLDmqHhR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmdESKDmNckglm.diag
[2026-04-01 00:15:22] -rw-r--r--. 1 boinc boinc     20698 Apr  1 00:15 stderr.txt
[2026-04-01 00:15:22] HITS file was successfully produced:
[2026-04-01 00:15:22] -rw-------. 1 boinc boinc 194614687 Apr  1 00:13 shared/HITS.pool.root.1
[2026-04-01 00:15:22]  *** Contents of shared directory: ***
[2026-04-01 00:15:22] total 409696
[2026-04-01 00:15:22] -rw-r--r--. 2 boinc boinc 222379858 Mar 31 19:49 ATLAS.root_0
[2026-04-01 00:15:22] -rw-r--r--. 2 boinc boinc     15845 Mar 31 19:49 start_atlas.sh
[2026-04-01 00:15:22] -rw-r--r--. 2 boinc boinc    656753 Mar 31 19:49 input.tar.gz
[2026-04-01 00:15:22] -rw-------. 1 boinc boinc 194614687 Apr  1 00:13 HITS.pool.root.1
[2026-04-01 00:15:22] -rw-------. 1 boinc boinc   1853440 Apr  1 00:15 result.tar.gz
00:15:23 (5464): run_atlas exited; CPU time 59346.150789
00:15:23 (5464): called boinc_finish(0)

</stderr_txt>
]]>

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