Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:33:11 (4097739): wrapper (7.7.26015): starting
07:33:11 (4097739): wrapper: running run_atlas (--nthreads 10)
[2026-03-31 07:33:11] Arguments: --nthreads 10
[2026-03-31 07:33:11] Threads: 10
[2026-03-31 07:33:11] Checking for CVMFS
[2026-03-31 07:33:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 07:33:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 07:33:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 07:33:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 07:33:12] 2.13.3.0 5308 188380 666500 157914 0 619 20009254 32935937 14041 16776704 0 402021191 99.505 643080190 38868 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-31 07:33:12] CVMFS is ok
[2026-03-31 07:33:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 07:33:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 07:33:12] Further information can be found at the LHC@home message board.
[2026-03-31 07:33:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 07:33:12] Checking for apptainer binary...
[2026-03-31 07:33:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 07:33:12] Running /usr/bin/apptainer --version
[2026-03-31 07:33:12] apptainer version 1.4.5-2.el9
[2026-03-31 07:33:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 07:33:12] c6-1-24-1.aglt2.org
[2026-03-31 07:33:12] apptainer works
[2026-03-31 07:33:12] Set ATHENA_PROC_NUMBER=10
[2026-03-31 07:33:12] Set ATHENA_CORE_NUMBER=10
[2026-03-31 07:33:12] Starting ATLAS job with PandaID=7072964981
[2026-03-31 07:33:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 09:03:41]  *** The last 200 lines of the pilot log: ***
[2026-03-31 09:03:41]  direct_access_wan=False
[2026-03-31 09:03:41]  domain=
[2026-03-31 09:03:41]  filesize=331701
[2026-03-31 09:03:41]  filetype=log
[2026-03-31 09:03:41]  guid=05a45f4b-4b91-448a-bffd-a0d1bd27faa1
[2026-03-31 09:03:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-31 09:03:41]  is_altstaged=None
[2026-03-31 09:03:41]  is_tar=False
[2026-03-31 09:03:41]  lfn=log.49263208._012055.job.log.tgz.1
[2026-03-31 09:03:41]  mtime=0
[2026-03-31 09:03:41]  protocol_id=None
[2026-03-31 09:03:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-31 09:03:41]  replicas=None
[2026-03-31 09:03:41]  scope=mc23_13p6TeV
[2026-03-31 09:03:41]  status=None
[2026-03-31 09:03:41]  status_code=0
[2026-03-31 09:03:41]  storage_token=
[2026-03-31 09:03:41]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-7072964981/log.49263208._012055.job.log.tgz.1
[2026-03-31 09:03:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/da/log.49263208._012055.job.log.tgz.1
[2026-03-31 09:03:41]  workdir=None
[2026-03-31 09:03:41] ]
[2026-03-31 09:03:41] 2026-03-31 13:02:55,062 | INFO     | transferring file log.49263208._012055.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-7072964981/log.49263208._012055.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-31 09:03:41] 2026-03-31 13:02:55,062 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-7072964981/log.49263208._012055.job.log.tgz.1 /tmp/boinchome/slots/2/log.49263208._012055.job
[2026-03-31 09:03:41] 2026-03-31 13:02:55,075 | INFO     | adding to output.list: log.49263208._012055.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/da/log.49263208._012055.job.log.tg
[2026-03-31 09:03:41] 2026-03-31 13:02:55,076 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-31 09:03:41] 2026-03-31 13:02:55,076 | INFO     | summary of transferred files:
[2026-03-31 09:03:41] 2026-03-31 13:02:55,076 | INFO     |  -- lfn=log.49263208._012055.job.log.tgz.1, status_code=0, status=transferred
[2026-03-31 09:03:41] 2026-03-31 13:02:55,076 | INFO     | stage-out finished correctly
[2026-03-31 09:03:41] 2026-03-31 13:02:56,501 | INFO     | monitor loop #383: job 0:7072964981 is in state 'finished'
[2026-03-31 09:03:41] 2026-03-31 13:02:56,502 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-31 09:03:41] 2026-03-31 13:02:57,621 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-31 09:03:41] 2026-03-31 13:02:58,781 | INFO     | job 7072964981 has state=finished
[2026-03-31 09:03:41] 2026-03-31 13:02:58,781 | INFO     | preparing for final server update for job 7072964981 in state='finished'
[2026-03-31 09:03:41] 2026-03-31 13:02:58,782 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7072964981/jobReport.json
[2026-03-31 09:03:41] 2026-03-31 13:02:58,784 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-03-31 09:03:41] 2026-03-31 13:02:58,784 | INFO     | this job has now completed (state=finished)
[2026-03-31 09:03:41] 2026-03-31 13:02:58,784 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 09:03:41] 2026-03-31 13:02:58,784 | INFO     | log transfer has been attempted: DONE
[2026-03-31 09:03:41] 2026-03-31 13:02:58,785 | INFO     | job 7072964981 has finished - writing final server update
[2026-03-31 09:03:41] 2026-03-31 13:02:58,785 | INFO     | total number of processed events: 400 (read)
[2026-03-31 09:03:41] 2026-03-31 13:02:58,793 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7072964981/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 09:03:41] 2026-03-31 13:02:58,794 | INFO     | extracted standard info from prmon json
[2026-03-31 09:03:41] 2026-03-31 13:02:58,794 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 09:03:41] 2026-03-31 13:02:58,794 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 09:03:41] 2026-03-31 13:02:58,794 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 09:03:41] 2026-03-31 13:02:58,796 | INFO     | fitting pss+swap vs Time
[2026-03-31 09:03:41] 2026-03-31 13:02:58,796 | INFO     | sum of square deviations: 164820184.2222226
[2026-03-31 09:03:41] 2026-03-31 13:02:58,796 | INFO     | sum of deviations: 1334768316.6296294
[2026-03-31 09:03:41] 2026-03-31 13:02:58,796 | INFO     | mean x (centered): 0.0
[2026-03-31 09:03:41] 2026-03-31 13:02:58,797 | INFO     | mean y: 3077434.6913580247
[2026-03-31 09:03:41] 2026-03-31 13:02:58,797 | INFO     | intersect: 3077434.6913580247
[2026-03-31 09:03:41] 2026-03-31 13:02:58,797 | INFO     | chi2: 0.000625748316072656
[2026-03-31 09:03:41] 2026-03-31 13:02:58,797 | INFO     | current memory leak: 8.10 B/s (using 81 data points, chi2=0.00)
[2026-03-31 09:03:41] 2026-03-31 13:02:58,797 | INFO     | could have reported an average CPU frequency of 2916 MHz (6 samples)
[2026-03-31 09:03:41] 2026-03-31 13:02:58,798 | INFO     | ..............................
[2026-03-31 09:03:41] 2026-03-31 13:02:58,798 | INFO     | . Timing measurements:
[2026-03-31 09:03:41] 2026-03-31 13:02:58,798 | INFO     | . get job = 0 s
[2026-03-31 09:03:41] 2026-03-31 13:02:58,798 | INFO     | . initial setup = 6 s
[2026-03-31 09:03:41] 2026-03-31 13:02:58,798 | INFO     | . payload setup = 8 s
[2026-03-31 09:03:41] 2026-03-31 13:02:58,798 | INFO     | . stage-in = 0 s
[2026-03-31 09:03:41] 2026-03-31 13:02:58,798 | INFO     | . payload execution = 5343 s
[2026-03-31 09:03:41] 2026-03-31 13:02:58,798 | INFO     | . stage-out = 0 s
[2026-03-31 09:03:41] 2026-03-31 13:02:58,798 | INFO     | . log creation = 0 s
[2026-03-31 09:03:41] 2026-03-31 13:02:58,798 | INFO     | ..............................
[2026-03-31 09:03:41] 2026-03-31 13:02:59,346 | INFO     | 
[2026-03-31 09:03:41] 2026-03-31 13:02:59,346 | INFO     | job summary report
[2026-03-31 09:03:41] 2026-03-31 13:02:59,346 | INFO     | --------------------------------------------------
[2026-03-31 09:03:41] 2026-03-31 13:02:59,346 | INFO     | PanDA job id: 7072964981
[2026-03-31 09:03:41] 2026-03-31 13:02:59,346 | INFO     | task id: 49263208
[2026-03-31 09:03:41] 2026-03-31 13:02:59,346 | INFO     | errors: (none)
[2026-03-31 09:03:41] 2026-03-31 13:02:59,346 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 09:03:41] 2026-03-31 13:02:59,347 | INFO     | pilot state: finished 
[2026-03-31 09:03:41] 2026-03-31 13:02:59,347 | INFO     | transexitcode: 0
[2026-03-31 09:03:41] 2026-03-31 13:02:59,347 | INFO     | exeerrorcode: 0
[2026-03-31 09:03:41] 2026-03-31 13:02:59,347 | INFO     | exeerrordiag: 
[2026-03-31 09:03:41] 2026-03-31 13:02:59,347 | INFO     | exitcode: 0
[2026-03-31 09:03:41] 2026-03-31 13:02:59,347 | INFO     | exitmsg: OK
[2026-03-31 09:03:41] 2026-03-31 13:02:59,347 | INFO     | cpuconsumptiontime: 38335 s
[2026-03-31 09:03:41] 2026-03-31 13:02:59,347 | INFO     | nevents: 400
[2026-03-31 09:03:41] 2026-03-31 13:02:59,347 | INFO     | neventsw: 0
[2026-03-31 09:03:41] 2026-03-31 13:02:59,347 | INFO     | pid: 4117664
[2026-03-31 09:03:41] 2026-03-31 13:02:59,347 | INFO     | pgrp: 4117664
[2026-03-31 09:03:41] 2026-03-31 13:02:59,347 | INFO     | corecount: 10
[2026-03-31 09:03:41] 2026-03-31 13:02:59,347 | INFO     | event service: False
[2026-03-31 09:03:41] 2026-03-31 13:02:59,347 | INFO     | sizes: {0: 2279790, 1: 2281619, 11: 2281619, 5356: 2308048, 5357: 2317046, 5360: 2317102, 5361: 2317424}
[2026-03-31 09:03:41] 2026-03-31 13:02:59,348 | INFO     | --------------------------------------------------
[2026-03-31 09:03:41] 2026-03-31 13:02:59,348 | INFO     | 
[2026-03-31 09:03:41] 2026-03-31 13:02:59,348 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-31 09:03:41] 2026-03-31 13:02:59,367 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,367 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,367 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,367 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,368 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,369 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 09:03:41] 2026-03-31 13:02:59,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,369 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 09:03:41] 2026-03-31 13:02:59,369 | INFO     | job 7072964981 has completed (purged errors)
[2026-03-31 09:03:41] 2026-03-31 13:02:59,369 | INFO     | overall cleanup function is called
[2026-03-31 09:03:41] 2026-03-31 13:03:00,377 | INFO     | --- collectZombieJob: --- 10, [4117664]
[2026-03-31 09:03:41] 2026-03-31 13:03:00,377 | INFO     | zombie collector waiting for pid 4117664
[2026-03-31 09:03:41] 2026-03-31 13:03:00,378 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 09:03:41] 2026-03-31 13:03:00,378 | INFO     | collected zombie processes
[2026-03-31 09:03:41] 2026-03-31 13:03:00,378 | INFO     | will attempt to kill all subprocesses of pid=4117664
[2026-03-31 09:03:41] 2026-03-31 13:03:00,852 | INFO     | PID=4103413 has CPU usage=13.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-31 09:03:41] 2026-03-31 13:03:00,853 | INFO     | .. there are 15 such processes running
[2026-03-31 09:03:41] 2026-03-31 13:03:01,083 | INFO     | process IDs to be killed: [4117664] (in reverse order)
[2026-03-31 09:03:41] 2026-03-31 13:03:01,184 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 09:03:41] 2026-03-31 13:03:01,184 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 09:03:41] 2026-03-31 13:03:01,197 | INFO     | did not find any defunct processes belonging to 4117664
[2026-03-31 09:03:41] 2026-03-31 13:03:01,209 | INFO     | did not find any defunct processes belonging to 4117664
[2026-03-31 09:03:41] 2026-03-31 13:03:01,209 | INFO     | Ready for new job
[2026-03-31 09:03:41] 2026-03-31 13:03:01,211 | INFO     | **************************************
[2026-03-31 09:03:41] 2026-03-31 13:03:01,211 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 09:03:41] 2026-03-31 13:03:01,212 | INFO     | **************************************
[2026-03-31 09:03:41] 2026-03-31 13:03:01,212 | INFO     | 
[2026-03-31 09:03:41] 2026-03-31 13:03:01,214 | INFO     | architecture information:
[2026-03-31 09:03:41] 2026-03-31 13:03:01,215 | INFO     | executing command: cat /etc/os-release
[2026-03-31 09:03:41] 2026-03-31 13:03:01,227 | INFO     | cat /etc/os-release:
[2026-03-31 09:03:41] NAME="CentOS Linux"
[2026-03-31 09:03:41] VERSION="7 (Core)"
[2026-03-31 09:03:41] ID="centos"
[2026-03-31 09:03:41] ID_LIKE="rhel fedora"
[2026-03-31 09:03:41] VERSION_ID="7"
[2026-03-31 09:03:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 09:03:41] ANSI_COLOR="0;31"
[2026-03-31 09:03:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 09:03:41] HOME_URL="https://www.centos.org/"
[2026-03-31 09:03:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 09:03:41] 
[2026-03-31 09:03:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 09:03:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 09:03:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 09:03:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 09:03:41] 
[2026-03-31 09:03:41] 2026-03-31 13:03:01,228 | INFO     | **************************************
[2026-03-31 09:03:41] 2026-03-31 13:03:01,731 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-31 09:03:41] 2026-03-31 13:03:01,747 | INFO     | sufficient remaining disk space (76449579008 B)
[2026-03-31 09:03:41] 2026-03-31 13:03:01,748 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 09:03:41] 2026-03-31 13:03:01,748 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 09:03:41] 2026-03-31 13:03:01,748 | INFO     | update_server=False
[2026-03-31 09:03:41] 2026-03-31 13:03:01,748 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 09:03:41] 2026-03-31 13:03:01,748 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-31 09:03:41] 2026-03-31 13:03:01,749 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 09:03:41] 2026-03-31 13:03:01,749 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 09:03:41] 2026-03-31 13:03:01,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 09:03:41] 2026-03-31 13:03:02,125 | INFO     | all data control threads have been joined
[2026-03-31 09:03:41] 2026-03-31 13:03:02,325 | INFO     | all job control threads have been joined
[2026-03-31 09:03:41] 2026-03-31 13:03:02,514 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 09:03:41] 2026-03-31 13:03:02,514 | INFO     | aborting loop
[2026-03-31 09:03:41] 2026-03-31 13:03:02,753 | INFO     | [job] retrieve thread has finished
[2026-03-31 09:03:41] 2026-03-31 13:03:02,791 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 09:03:41] 2026-03-31 13:03:02,814 | INFO     | all payload control threads have been joined
[2026-03-31 09:03:41] 2026-03-31 13:03:02,837 | INFO     | [data] copytool_in thread has finished
[2026-03-31 09:03:41] 2026-03-31 13:03:02,860 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 09:03:41] 2026-03-31 13:03:02,882 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 09:03:41] 2026-03-31 13:03:03,131 | INFO     | [data] control thread has finished
[2026-03-31 09:03:41] 2026-03-31 13:03:03,153 | INFO     | [job] validate thread has finished
[2026-03-31 09:03:41] 2026-03-31 13:03:03,161 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 09:03:41] 2026-03-31 13:03:03,331 | INFO     | [job] control thread has finished
[2026-03-31 09:03:41] 2026-03-31 13:03:03,338 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 09:03:41] 2026-03-31 13:03:03,356 | INFO     | [payload] validate_post thread has finished
[2026-03-31 09:03:41] 2026-03-31 13:03:03,515 | INFO     | [job] job monitor thread has finished
[2026-03-31 09:03:41] 2026-03-31 13:03:03,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 09:03:41] 2026-03-31 13:03:03,817 | INFO     | [payload] control thread has finished
[2026-03-31 09:03:41] 2026-03-31 13:03:03,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 09:03:41] 2026-03-31 13:03:03,917 | INFO     | [payload] failed_post thread has finished
[2026-03-31 09:03:41] 2026-03-31 13:03:04,889 | INFO     | [job] queue monitor thread has finished
[2026-03-31 09:03:41] 2026-03-31 13:03:05,167 | INFO     | [data] copytool_out thread has finished
[2026-03-31 09:03:41] 2026-03-31 13:03:07,737 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 09:03:41] 2026-03-31 13:03:20,471 [wrapper] supervise_pilot (15 min periods counter: 7)
[2026-03-31 09:03:41] 2026-03-31 13:03:35,565 | INFO     | [monitor] cgroup control has ended
[2026-03-31 09:03:41] 2026-03-31 13:03:36,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140414620714816)>', '<ExcThread(monitor, started 140414132668160)>']
[2026-03-31 09:03:41] 2026-03-31 13:03:36,912 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 09:03:41] 2026-03-31 13:03:36,913 | INFO     | [monitor] control thread has ended
[2026-03-31 09:03:41] 2026-03-31 13:03:41,039 | INFO     | all workflow threads have been joined
[2026-03-31 09:03:41] 2026-03-31 13:03:41,039 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 09:03:41] 2026-03-31 13:03:41,039 | INFO     | traces error code: 0
[2026-03-31 09:03:41] 2026-03-31 13:03:41,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 09:03:41] 2026-03-31 13:03:41,254 [wrapper] ==== pilot stdout END ====
[2026-03-31 09:03:41] 2026-03-31 13:03:41,257 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 09:03:41] 2026-03-31 13:03:41,260 [wrapper] pilotpid: 4103413
[2026-03-31 09:03:41] 2026-03-31 13:03:41,264 [wrapper] Pilot exit status: 0
[2026-03-31 09:03:41] 2026-03-31 13:03:41,276 [wrapper] pandaids: 7072964981
[2026-03-31 09:03:41] 2026-03-31 13:03:41,361 [wrapper] cleanup supervisor_pilot  239769 4103414
[2026-03-31 09:03:41] 2026-03-31 13:03:41,364 [wrapper] Test setup, not cleaning
[2026-03-31 09:03:41] 2026-03-31 13:03:41,367 [wrapper] apfmon messages muted
[2026-03-31 09:03:41] 2026-03-31 13:03:41,370 [wrapper] ==== wrapper stdout END ====
[2026-03-31 09:03:41] 2026-03-31 13:03:41,374 [wrapper] ==== wrapper stderr END ====
[2026-03-31 09:03:41]  *** Error codes and diagnostics ***
[2026-03-31 09:03:41]     "exeErrorCode": 0,
[2026-03-31 09:03:41]     "pilotErrorCode": 0,
[2026-03-31 09:03:41]  *** Listing of results directory ***
[2026-03-31 09:03:41] total 417420
[2026-03-31 09:03:41] -rw-r--r--. 1 boincer umatlas    644034 Mar 31 01:48 pilot3.tar.gz
[2026-03-31 09:03:41] -rw-r--r--. 1 boincer umatlas      5118 Mar 31 01:54 queuedata.json
[2026-03-31 09:03:41] -rwx------. 1 boincer umatlas     36322 Mar 31 01:55 runpilot2-wrapper.sh
[2026-03-31 09:03:41] -rw-r--r--. 1 boincer umatlas       100 Mar 31 07:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 09:03:41] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 31 07:33 run_atlas
[2026-03-31 09:03:41] -rw-r--r--. 1 boincer umatlas       105 Mar 31 07:33 job.xml
[2026-03-31 09:03:41] -rw-r--r--. 2 boincer umatlas 221133312 Mar 31 07:33 EVNT.49263206._000532.pool.root.1
[2026-03-31 09:03:41] -rw-r--r--. 2 boincer umatlas     15845 Mar 31 07:33 start_atlas.sh
[2026-03-31 09:03:41] drwxrwx--x. 2 boincer umatlas      4096 Mar 31 07:33 shared
[2026-03-31 09:03:41] -rw-r--r--. 2 boincer umatlas    656744 Mar 31 07:33 input.tar.gz
[2026-03-31 09:03:41] -rw-r--r--. 1 boincer umatlas         0 Mar 31 07:33 boinc_lockfile
[2026-03-31 09:03:41] -rw-r--r--. 1 boincer umatlas      2575 Mar 31 07:33 pandaJob.out
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas        57 Mar 31 07:33 setup.sh.local
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas   1003225 Mar 31 07:33 agis_schedconf.cvmfs.json
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas   1511579 Mar 31 07:33 agis_ddmendpoints.agis.ALL.json
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas       442 Mar 31 07:33 workernode_map.json
[2026-03-31 09:03:41] drwx------. 5 boincer umatlas      4096 Mar 31 07:33 pilot3
[2026-03-31 09:03:41] -rw-r--r--. 1 boincer umatlas      6842 Mar 31 09:01 init_data.xml
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas        95 Mar 31 09:02 pilot_heartbeat.json
[2026-03-31 09:03:41] -rw-r--r--. 1 boincer umatlas       529 Mar 31 09:02 boinc_task_state.xml
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas 200538828 Mar 31 09:02 HITS.49263208._012055.pool.root.1
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas      1039 Mar 31 09:02 memory_monitor_summary.json
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas    331701 Mar 31 09:02 log.49263208._012055.job.log.tgz.1
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas      6401 Mar 31 09:02 heartbeat_new.json
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas      6292 Mar 31 09:02 heartbeat.json
[2026-03-31 09:03:41] -rw-r--r--. 1 boincer umatlas      8192 Mar 31 09:03 boinc_mmap_file
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas      4547 Mar 31 09:03 pilotlog.txt
[2026-03-31 09:03:41] -rw-r--r--. 1 boincer umatlas        27 Mar 31 09:03 wrapper_checkpoint.txt
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas    516100 Mar 31 09:03 log.49263208._012055.job.log.1
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas       357 Mar 31 09:03 output.list
[2026-03-31 09:03:41] -rw-r--r--. 1 boincer umatlas       620 Mar 31 09:03 runtime_log
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas    870400 Mar 31 09:03 result.tar.gz
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas       654 Mar 31 09:03 xo0LDmfFhR9n9Rq4apOajLDm4fhM0noT9bVoINGKDm6BSKDm7yD6Eo.diag
[2026-03-31 09:03:41] -rw-r--r--. 1 boincer umatlas      9348 Mar 31 09:03 runtime_log.err
[2026-03-31 09:03:41] -rw-r--r--. 1 boincer umatlas     21014 Mar 31 09:03 stderr.txt
[2026-03-31 09:03:41] HITS file was successfully produced:
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas 200538828 Mar 31 09:02 shared/HITS.pool.root.1
[2026-03-31 09:03:41]  *** Contents of shared directory: ***
[2026-03-31 09:03:41] total 413308
[2026-03-31 09:03:41] -rw-r--r--. 2 boincer umatlas 221133312 Mar 31 07:33 ATLAS.root_0
[2026-03-31 09:03:41] -rw-r--r--. 2 boincer umatlas     15845 Mar 31 07:33 start_atlas.sh
[2026-03-31 09:03:41] -rw-r--r--. 2 boincer umatlas    656744 Mar 31 07:33 input.tar.gz
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas 200538828 Mar 31 09:02 HITS.pool.root.1
[2026-03-31 09:03:41] -rw-------. 1 boincer umatlas    870400 Mar 31 09:03 result.tar.gz
09:03:43 (4097739): run_atlas exited; CPU time 38455.762568
09:03:43 (4097739): called boinc_finish(0)

</stderr_txt>
]]>

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