Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:19:44 (30353): wrapper (7.7.26015): starting
19:19:44 (30353): wrapper: running run_atlas (--nthreads 8)
[2026-03-31 19:19:44] Arguments: --nthreads 8
[2026-03-31 19:19:44] Threads: 8
[2026-03-31 19:19:44] Checking for CVMFS
[2026-03-31 19:19:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 19:19:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 19:19:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 19:19:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 19:19:48] 2.11.2.0 21086 152345 138460 157925 2 53 24714663 25165824 4838 130560 159 45401250 99.852 29166029 965 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-31 19:19:48] CVMFS is ok
[2026-03-31 19:19:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 19:19:48] Checking for apptainer binary...
[2026-03-31 19:19:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 19:19:48] Running /usr/bin/apptainer --version
[2026-03-31 19:19:48] apptainer version 1.3.2-1.el7
[2026-03-31 19:19:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 19:19:54] cg-vwn408.simple-grid.lan
[2026-03-31 19:19:54] apptainer works
[2026-03-31 19:19:54] Set ATHENA_PROC_NUMBER=8
[2026-03-31 19:19:54] Set ATHENA_CORE_NUMBER=8
[2026-03-31 19:19:54] Starting ATLAS job with PandaID=7072875918
[2026-03-31 19:19:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 23:39:11]  *** The last 200 lines of the pilot log: ***
[2026-03-31 23:39:11] 2026-03-31 21:38:23,222 | INFO     | this job has now completed (state=finished)
[2026-03-31 23:39:11] 2026-03-31 21:38:23,222 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 23:39:11] 2026-03-31 21:38:23,222 | INFO     | log transfer has been attempted: DONE
[2026-03-31 23:39:11] 2026-03-31 21:38:23,222 | INFO     | job 7072875918 has finished - writing final server update
[2026-03-31 23:39:11] 2026-03-31 21:38:23,225 | INFO     | total number of processed events: 400 (read)
[2026-03-31 23:39:11] 2026-03-31 21:38:23,227 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7072875918/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 23:39:11] 2026-03-31 21:38:23,228 | INFO     | extracted standard info from prmon json
[2026-03-31 23:39:11] 2026-03-31 21:38:23,228 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 23:39:11] 2026-03-31 21:38:23,228 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 23:39:11] 2026-03-31 21:38:23,228 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 23:39:11] 2026-03-31 21:38:23,234 | INFO     | fitting pss+swap vs Time
[2026-03-31 23:39:11] 2026-03-31 21:38:23,234 | INFO     | sum of square deviations: 4560048290.0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,237 | INFO     | sum of deviations: 46178490413.0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,237 | INFO     | mean x (centered): 0.0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,237 | INFO     | mean y: 2467699.5346938777
[2026-03-31 23:39:11] 2026-03-31 21:38:23,237 | INFO     | intersect: 2467699.5346938777
[2026-03-31 23:39:11] 2026-03-31 21:38:23,238 | INFO     | chi2: 5.720966753209936
[2026-03-31 23:39:11] 2026-03-31 21:38:23,238 | INFO     | sum of square deviations: 4286517580.0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,240 | INFO     | sum of deviations: 61437265964.50001
[2026-03-31 23:39:11] 2026-03-31 21:38:23,241 | INFO     | mean x (centered): 0.0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,241 | INFO     | mean y: 2476056.8958333335
[2026-03-31 23:39:11] 2026-03-31 21:38:23,241 | INFO     | intersect: 2476056.8958333335
[2026-03-31 23:39:11] 2026-03-31 21:38:23,241 | INFO     | chi2: 4.996120171914508
[2026-03-31 23:39:11] 2026-03-31 21:38:23,241 | INFO     | current chi2=4.996120171914508 (change=12.670001637201075 %)
[2026-03-31 23:39:11] 2026-03-31 21:38:23,242 | INFO     | right removable region: 239
[2026-03-31 23:39:11] 2026-03-31 21:38:23,242 | INFO     | sum of square deviations: 4286517580.0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,244 | INFO     | sum of deviations: -35532918765.0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,244 | INFO     | mean x (centered): 0.0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,245 | INFO     | mean y: 2513188.683333333
[2026-03-31 23:39:11] 2026-03-31 21:38:23,245 | INFO     | intersect: 2513188.683333333
[2026-03-31 23:39:11] 2026-03-31 21:38:23,245 | INFO     | chi2: 1.3857019646673145
[2026-03-31 23:39:11] 2026-03-31 21:38:23,245 | INFO     | current chi2=1.3857019646673145 (change=75.77853491475334 %)
[2026-03-31 23:39:11] 2026-03-31 21:38:23,246 | INFO     | sum of square deviations: 4024149870.0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,248 | INFO     | sum of deviations: -54447613934.999985
[2026-03-31 23:39:11] 2026-03-31 21:38:23,248 | INFO     | mean x (centered): 0.0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,248 | INFO     | mean y: 2524081.0425531915
[2026-03-31 23:39:11] 2026-03-31 21:38:23,249 | INFO     | intersect: 2524081.0425531915
[2026-03-31 23:39:11] 2026-03-31 21:38:23,249 | INFO     | chi2: 0.9704011364340023
[2026-03-31 23:39:11] 2026-03-31 21:38:23,249 | INFO     | current chi2=0.9704011364340023 (change=29.970429343586847 %)
[2026-03-31 23:39:11] 2026-03-31 21:38:23,250 | INFO     | sum of square deviations: 3772712597.5
[2026-03-31 23:39:11] 2026-03-31 21:38:23,252 | INFO     | sum of deviations: -47697266156.0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,252 | INFO     | mean x (centered): 0.0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,252 | INFO     | mean y: 2519981.0782608697
[2026-03-31 23:39:11] 2026-03-31 21:38:23,252 | INFO     | intersect: 2519981.0782608697
[2026-03-31 23:39:11] 2026-03-31 21:38:23,253 | INFO     | chi2: 0.9609740983460225
[2026-03-31 23:39:11] 2026-03-31 21:38:23,253 | INFO     | current chi2=0.9609740983460225 (change=0.9714578573786402 %)
[2026-03-31 23:39:11] 2026-03-31 21:38:23,253 | INFO     | left removable region: 15
[2026-03-31 23:39:11] 2026-03-31 21:38:23,253 | INFO     | sum of square deviations: 3485088600.0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,255 | INFO     | sum of deviations: -31386988098.5
[2026-03-31 23:39:11] 2026-03-31 21:38:23,256 | INFO     | mean x (centered): 0.0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,256 | INFO     | mean y: 2530145.46875
[2026-03-31 23:39:11] 2026-03-31 21:38:23,256 | INFO     | intersect: 2530145.46875
[2026-03-31 23:39:11] 2026-03-31 21:38:23,256 | INFO     | chi2: 0.1713171600534471
[2026-03-31 23:39:11] 2026-03-31 21:38:23,257 | INFO     | current memory leak: -9.01 B/s (using 224 data points, chi2=0.17)
[2026-03-31 23:39:11] 2026-03-31 21:38:23,259 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-03-31 23:39:11] 2026-03-31 21:38:23,260 | INFO     | ..............................
[2026-03-31 23:39:11] 2026-03-31 21:38:23,260 | INFO     | . Timing measurements:
[2026-03-31 23:39:11] 2026-03-31 21:38:23,260 | INFO     | . get job = 0 s
[2026-03-31 23:39:11] 2026-03-31 21:38:23,260 | INFO     | . initial setup = 102 s
[2026-03-31 23:39:11] 2026-03-31 21:38:23,260 | INFO     | . payload setup = 156 s
[2026-03-31 23:39:11] 2026-03-31 21:38:23,260 | INFO     | . stage-in = 0 s
[2026-03-31 23:39:11] 2026-03-31 21:38:23,260 | INFO     | . payload execution = 15045 s
[2026-03-31 23:39:11] 2026-03-31 21:38:23,260 | INFO     | . stage-out = 3 s
[2026-03-31 23:39:11] 2026-03-31 21:38:23,261 | INFO     | . log creation = 1 s
[2026-03-31 23:39:11] 2026-03-31 21:38:23,261 | INFO     | ..............................
[2026-03-31 23:39:11] 2026-03-31 21:38:23,395 | INFO     | 
[2026-03-31 23:39:11] 2026-03-31 21:38:23,395 | INFO     | job summary report
[2026-03-31 23:39:11] 2026-03-31 21:38:23,396 | INFO     | --------------------------------------------------
[2026-03-31 23:39:11] 2026-03-31 21:38:23,396 | INFO     | PanDA job id: 7072875918
[2026-03-31 23:39:11] 2026-03-31 21:38:23,396 | INFO     | task id: 49263200
[2026-03-31 23:39:11] 2026-03-31 21:38:23,396 | INFO     | errors: (none)
[2026-03-31 23:39:11] 2026-03-31 21:38:23,396 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 23:39:11] 2026-03-31 21:38:23,396 | INFO     | pilot state: finished 
[2026-03-31 23:39:11] 2026-03-31 21:38:23,396 | INFO     | transexitcode: 0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,396 | INFO     | exeerrorcode: 0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,397 | INFO     | exeerrordiag: 
[2026-03-31 23:39:11] 2026-03-31 21:38:23,397 | INFO     | exitcode: 0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,397 | INFO     | exitmsg: OK
[2026-03-31 23:39:11] 2026-03-31 21:38:23,397 | INFO     | cpuconsumptiontime: 58679 s
[2026-03-31 23:39:11] 2026-03-31 21:38:23,397 | INFO     | nevents: 400
[2026-03-31 23:39:11] 2026-03-31 21:38:23,397 | INFO     | neventsw: 0
[2026-03-31 23:39:11] 2026-03-31 21:38:23,397 | INFO     | pid: 6593
[2026-03-31 23:39:11] 2026-03-31 21:38:23,397 | INFO     | pgrp: 6593
[2026-03-31 23:39:11] 2026-03-31 21:38:23,398 | INFO     | corecount: 8
[2026-03-31 23:39:11] 2026-03-31 21:38:23,398 | INFO     | event service: False
[2026-03-31 23:39:11] 2026-03-31 21:38:23,398 | INFO     | sizes: {0: 2279732, 1: 2279816, 2: 2281645, 12: 2281645, 15206: 2312623, 15211: 2321621, 15212: 2321805, 15214: 2321999}
[2026-03-31 23:39:11] 2026-03-31 21:38:23,398 | INFO     | --------------------------------------------------
[2026-03-31 23:39:11] 2026-03-31 21:38:23,398 | INFO     | 
[2026-03-31 23:39:11] 2026-03-31 21:38:23,398 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-31 23:39:11] 2026-03-31 21:38:23,514 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,514 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,514 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,514 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,514 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,514 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,515 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,515 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,515 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,515 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,515 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,515 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,515 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,515 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,516 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 23:39:11] 2026-03-31 21:38:23,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,516 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 23:39:11] 2026-03-31 21:38:23,516 | INFO     | job 7072875918 has completed (purged errors)
[2026-03-31 23:39:11] 2026-03-31 21:38:23,516 | INFO     | overall cleanup function is called
[2026-03-31 23:39:11] 2026-03-31 21:38:24,525 | INFO     | --- collectZombieJob: --- 10, [6593]
[2026-03-31 23:39:11] 2026-03-31 21:38:24,525 | INFO     | zombie collector waiting for pid 6593
[2026-03-31 23:39:11] 2026-03-31 21:38:24,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 23:39:11] 2026-03-31 21:38:24,526 | INFO     | collected zombie processes
[2026-03-31 23:39:11] 2026-03-31 21:38:24,526 | INFO     | will attempt to kill all subprocesses of pid=6593
[2026-03-31 23:39:11] 2026-03-31 21:38:24,630 | INFO     | process IDs to be killed: [6593] (in reverse order)
[2026-03-31 23:39:11] 2026-03-31 21:38:25,470 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 23:39:11] 2026-03-31 21:38:25,470 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 23:39:11] 2026-03-31 21:38:25,473 | INFO     | did not find any defunct processes belonging to 6593
[2026-03-31 23:39:11] 2026-03-31 21:38:25,476 | INFO     | did not find any defunct processes belonging to 6593
[2026-03-31 23:39:11] 2026-03-31 21:38:25,476 | INFO     | Ready for new job
[2026-03-31 23:39:11] 2026-03-31 21:38:25,478 | INFO     | **************************************
[2026-03-31 23:39:11] 2026-03-31 21:38:25,478 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 23:39:11] 2026-03-31 21:38:25,478 | INFO     | **************************************
[2026-03-31 23:39:11] 2026-03-31 21:38:25,478 | INFO     | 
[2026-03-31 23:39:11] 2026-03-31 21:38:25,479 | INFO     | pilot is running in a VM
[2026-03-31 23:39:11] 2026-03-31 21:38:25,479 | INFO     | architecture information:
[2026-03-31 23:39:11] 2026-03-31 21:38:25,485 | INFO     | executing command: cat /etc/os-release
[2026-03-31 23:39:11] 2026-03-31 21:38:25,653 | INFO     | cat /etc/os-release:
[2026-03-31 23:39:11] NAME="CentOS Linux"
[2026-03-31 23:39:11] VERSION="7 (Core)"
[2026-03-31 23:39:11] ID="centos"
[2026-03-31 23:39:11] ID_LIKE="rhel fedora"
[2026-03-31 23:39:11] VERSION_ID="7"
[2026-03-31 23:39:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 23:39:11] ANSI_COLOR="0;31"
[2026-03-31 23:39:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 23:39:11] HOME_URL="https://www.centos.org/"
[2026-03-31 23:39:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 23:39:11] 
[2026-03-31 23:39:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 23:39:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 23:39:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 23:39:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 23:39:11] 
[2026-03-31 23:39:11] 2026-03-31 21:38:25,653 | INFO     | **************************************
[2026-03-31 23:39:11] 2026-03-31 21:38:26,156 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-31 23:39:11] 2026-03-31 21:38:26,340 | INFO     | sufficient remaining disk space (496795385856 B)
[2026-03-31 23:39:11] 2026-03-31 21:38:26,340 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 23:39:11] 2026-03-31 21:38:26,340 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 23:39:11] 2026-03-31 21:38:26,340 | INFO     | update_server=False
[2026-03-31 23:39:11] 2026-03-31 21:38:26,340 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 23:39:11] 2026-03-31 21:38:26,341 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 23:39:11] 2026-03-31 21:38:26,342 | INFO     | aborting loop
[2026-03-31 23:39:11] 2026-03-31 21:38:26,347 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 23:39:11] 2026-03-31 21:38:26,604 | INFO     | all data control threads have been joined
[2026-03-31 23:39:11] 2026-03-31 21:38:26,994 | INFO     | all job control threads have been joined
[2026-03-31 23:39:11] 2026-03-31 21:38:27,346 | INFO     | [job] retrieve thread has finished
[2026-03-31 23:39:11] 2026-03-31 21:38:27,347 | INFO     | [job] job monitor thread has finished
[2026-03-31 23:39:11] 2026-03-31 21:38:27,369 | INFO     | [data] copytool_in thread has finished
[2026-03-31 23:39:11] 2026-03-31 21:38:27,408 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 23:39:11] 2026-03-31 21:38:27,489 | INFO     | all payload control threads have been joined
[2026-03-31 23:39:11] 2026-03-31 21:38:27,546 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 23:39:11] 2026-03-31 21:38:27,610 | INFO     | [data] control thread has finished
[2026-03-31 23:39:11] 2026-03-31 21:38:28,000 | INFO     | [job] control thread has finished
[2026-03-31 23:39:11] 2026-03-31 21:38:28,037 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 23:39:11] 2026-03-31 21:38:28,056 | INFO     | [payload] failed_post thread has finished
[2026-03-31 23:39:11] 2026-03-31 21:38:28,061 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 23:39:11] 2026-03-31 21:38:28,202 | INFO     | [payload] validate_post thread has finished
[2026-03-31 23:39:11] 2026-03-31 21:38:28,307 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 23:39:11] 2026-03-31 21:38:28,354 | INFO     | [data] copytool_out thread has finished
[2026-03-31 23:39:11] 2026-03-31 21:38:28,408 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 23:39:11] 2026-03-31 21:38:28,495 | INFO     | [payload] control thread has finished
[2026-03-31 23:39:11] 2026-03-31 21:38:28,567 | INFO     | [job] validate thread has finished
[2026-03-31 23:39:11] 2026-03-31 21:38:29,414 | INFO     | [job] queue monitor thread has finished
[2026-03-31 23:39:11] 2026-03-31 21:38:32,047 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 23:39:11] 2026-03-31 21:38:55,327 | INFO     | PID=2095 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-31 23:39:11] 2026-03-31 21:38:55,327 | INFO     | .. there are 9 such processes running
[2026-03-31 23:39:11] 2026-03-31 21:38:55,328 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 23:39:11] 2026-03-31 21:38:55,328 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 23:39:11] 2026-03-31 21:38:55,328 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 23:39:11] 2026-03-31 21:39:03,100 | INFO     | [monitor] cgroup control has ended
[2026-03-31 23:39:11] 2026-03-31 21:39:03,338 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140536645678912)>', '<ExcThread(monitor, started 140536212084480)>']
[2026-03-31 23:39:11] 2026-03-31 21:39:03,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 23:39:11] 2026-03-31 21:39:03,376 | INFO     | [monitor] control thread has ended
[2026-03-31 23:39:11] 2026-03-31 21:39:08,364 | INFO     | all workflow threads have been joined
[2026-03-31 23:39:11] 2026-03-31 21:39:08,364 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 23:39:11] 2026-03-31 21:39:08,365 | INFO     | traces error code: 0
[2026-03-31 23:39:11] 2026-03-31 21:39:08,365 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 23:39:11] 2026-03-31 21:39:08,689 [wrapper] ==== pilot stdout END ====
[2026-03-31 23:39:11] 2026-03-31 21:39:08,779 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 23:39:11] 2026-03-31 21:39:08,929 [wrapper] pilotpid: 2095
[2026-03-31 23:39:11] 2026-03-31 21:39:09,087 [wrapper] Pilot exit status: 0
[2026-03-31 23:39:11] 2026-03-31 21:39:09,553 [wrapper] pandaids: 7072875918
[2026-03-31 23:39:11] 2026-03-31 21:39:10,127 [wrapper] cleanup supervisor_pilot 14769 2096
[2026-03-31 23:39:11] 2026-03-31 21:39:10,180 [wrapper] Test setup, not cleaning
[2026-03-31 23:39:11] 2026-03-31 21:39:10,252 [wrapper] apfmon messages muted
[2026-03-31 23:39:11] 2026-03-31 21:39:10,342 [wrapper] ==== wrapper stdout END ====
[2026-03-31 23:39:11] 2026-03-31 21:39:10,424 [wrapper] ==== wrapper stderr END ====
[2026-03-31 23:39:11]  *** Error codes and diagnostics ***
[2026-03-31 23:39:11]     "exeErrorCode": 0,
[2026-03-31 23:39:11]     "pilotErrorCode": 0,
[2026-03-31 23:39:11]  *** Listing of results directory ***
[2026-03-31 23:39:11] total 419592
[2026-03-31 23:39:11] -rw-r--r--. 1 boinc boinc    644034 Mar 31 07:48 pilot3.tar.gz
[2026-03-31 23:39:11] -rw-r--r--. 1 boinc boinc      5118 Mar 31 07:54 queuedata.json
[2026-03-31 23:39:11] -rwx------. 1 boinc boinc     36322 Mar 31 07:54 runpilot2-wrapper.sh
[2026-03-31 23:39:11] -rw-r--r--. 1 boinc boinc       100 Mar 31 19:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 23:39:11] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 19:19 run_atlas
[2026-03-31 23:39:11] -rw-r--r--. 1 boinc boinc       105 Mar 31 19:19 job.xml
[2026-03-31 23:39:11] -rw-r--r--. 1 boinc boinc      6391 Mar 31 19:19 init_data.xml
[2026-03-31 23:39:11] -rw-r--r--. 2 boinc boinc 227519439 Mar 31 19:19 EVNT.49263198._000494.pool.root.1
[2026-03-31 23:39:11] -rw-r--r--. 2 boinc boinc     15845 Mar 31 19:19 start_atlas.sh
[2026-03-31 23:39:11] drwxrwx--x. 2 boinc boinc        68 Mar 31 19:19 shared
[2026-03-31 23:39:11] -rw-r--r--. 2 boinc boinc    656757 Mar 31 19:19 input.tar.gz
[2026-03-31 23:39:11] -rw-r--r--. 1 boinc boinc         0 Mar 31 19:19 boinc_lockfile
[2026-03-31 23:39:11] -rw-r--r--. 1 boinc boinc      2574 Mar 31 19:19 pandaJob.out
[2026-03-31 23:39:11] -rw-------. 1 boinc boinc       415 Mar 31 19:24 workernode_map.json
[2026-03-31 23:39:11] -rw-------. 1 boinc boinc   1005014 Mar 31 19:24 agis_schedconf.cvmfs.json
[2026-03-31 23:39:11] drwx------. 5 boinc boinc      4096 Mar 31 19:24 pilot3
[2026-03-31 23:39:11] -rw-------. 1 boinc boinc 194544184 Mar 31 23:36 HITS.49263200._012327.pool.root.1
[2026-03-31 23:39:11] -rw-r--r--. 1 boinc boinc       530 Mar 31 23:36 boinc_task_state.xml
[2026-03-31 23:39:11] -rw-------. 1 boinc boinc      1012 Mar 31 23:38 memory_monitor_summary.json
[2026-03-31 23:39:11] -rw-------. 1 boinc boinc   1511579 Mar 31 23:38 agis_ddmendpoints.agis.ALL.json
[2026-03-31 23:39:11] -rw-------. 1 boinc boinc    387549 Mar 31 23:38 log.49263200._012327.job.log.tgz.1
[2026-03-31 23:39:11] -rw-------. 1 boinc boinc      6338 Mar 31 23:38 heartbeat_new.json
[2026-03-31 23:39:11] -rw-------. 1 boinc boinc      6229 Mar 31 23:38 heartbeat.json
[2026-03-31 23:39:11] -rw-r--r--. 1 boinc boinc      8192 Mar 31 23:38 boinc_mmap_file
[2026-03-31 23:39:11] -rw-r--r--. 1 boinc boinc        28 Mar 31 23:38 wrapper_checkpoint.txt
[2026-03-31 23:39:11] -rw-------. 1 boinc boinc        95 Mar 31 23:38 pilot_heartbeat.json
[2026-03-31 23:39:11] -rw-------. 1 boinc boinc      4878 Mar 31 23:39 pilotlog.txt
[2026-03-31 23:39:11] -rw-------. 1 boinc boinc   1384130 Mar 31 23:39 log.49263200._012327.job.log.1
[2026-03-31 23:39:11] -rw-------. 1 boinc boinc       357 Mar 31 23:39 output.list
[2026-03-31 23:39:11] -rw-r--r--. 1 boinc boinc       620 Mar 31 23:39 runtime_log
[2026-03-31 23:39:11] -rw-------. 1 boinc boinc   1792000 Mar 31 23:39 result.tar.gz
[2026-03-31 23:39:11] -rw-------. 1 boinc boinc       655 Mar 31 23:39 u6WMDmAFhR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmi9RKDmEO5r0n.diag
[2026-03-31 23:39:11] -rw-r--r--. 1 boinc boinc      8816 Mar 31 23:39 runtime_log.err
[2026-03-31 23:39:11] -rw-r--r--. 1 boinc boinc     20620 Mar 31 23:39 stderr.txt
[2026-03-31 23:39:11] HITS file was successfully produced:
[2026-03-31 23:39:11] -rw-------. 1 boinc boinc 194544184 Mar 31 23:36 shared/HITS.pool.root.1
[2026-03-31 23:39:11]  *** Contents of shared directory: ***
[2026-03-31 23:39:11] total 414588
[2026-03-31 23:39:11] -rw-r--r--. 2 boinc boinc 227519439 Mar 31 19:19 ATLAS.root_0
[2026-03-31 23:39:11] -rw-r--r--. 2 boinc boinc     15845 Mar 31 19:19 start_atlas.sh
[2026-03-31 23:39:11] -rw-r--r--. 2 boinc boinc    656757 Mar 31 19:19 input.tar.gz
[2026-03-31 23:39:11] -rw-------. 1 boinc boinc 194544184 Mar 31 23:36 HITS.pool.root.1
[2026-03-31 23:39:11] -rw-------. 1 boinc boinc   1792000 Mar 31 23:39 result.tar.gz
23:39:13 (30353): run_atlas exited; CPU time 58915.921347
23:39:13 (30353): called boinc_finish(0)

</stderr_txt>
]]>

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