Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:38:39 (13881): wrapper (7.7.26015): starting
19:38:39 (13881): wrapper: running run_atlas (--nthreads 8)
[2026-03-31 19:38:39] Arguments: --nthreads 8
[2026-03-31 19:38:39] Threads: 8
[2026-03-31 19:38:39] Checking for CVMFS
[2026-03-31 19:38:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 19:38:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 19:38:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 19:38:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 19:38:42] 2.11.2.0 7147 152364 137316 157925 1 54 13079093 25165825 899 130560 155 41655895 99.817 28897947 842 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-31 19:38:42] CVMFS is ok
[2026-03-31 19:38:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 19:38:42] Checking for apptainer binary...
[2026-03-31 19:38:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 19:38:42] Running /usr/bin/apptainer --version
[2026-03-31 19:38:42] apptainer version 1.3.2-1.el7
[2026-03-31 19:38:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 19:39:03] cg-vwn412.simple-grid.lan
[2026-03-31 19:39:03] apptainer works
[2026-03-31 19:39:03] Set ATHENA_PROC_NUMBER=8
[2026-03-31 19:39:03] Set ATHENA_CORE_NUMBER=8
[2026-03-31 19:39:04] Starting ATLAS job with PandaID=7072876333
[2026-03-31 19:39:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 00:09:21]  *** The last 200 lines of the pilot log: ***
[2026-04-01 00:09:21] 2026-03-31 22:08:09,318 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-01 00:09:21] 2026-03-31 22:08:09,318 | INFO     | log transfer has been attempted: DONE
[2026-04-01 00:09:21] 2026-03-31 22:08:09,318 | INFO     | job 7072876333 has finished - writing final server update
[2026-04-01 00:09:21] 2026-03-31 22:08:09,318 | INFO     | total number of processed events: 400 (read)
[2026-04-01 00:09:21] 2026-03-31 22:08:09,320 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7072876333/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 00:09:21] 2026-03-31 22:08:09,321 | INFO     | extracted standard info from prmon json
[2026-04-01 00:09:21] 2026-03-31 22:08:09,321 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 00:09:21] 2026-03-31 22:08:09,321 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 00:09:21] 2026-03-31 22:08:09,321 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 00:09:21] 2026-03-31 22:08:09,326 | INFO     | fitting pss+swap vs Time
[2026-04-01 00:09:21] 2026-03-31 22:08:09,327 | INFO     | sum of square deviations: 4962187923.0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,329 | INFO     | sum of deviations: 162004312888.0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,330 | INFO     | mean x (centered): 0.0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,330 | INFO     | mean y: 2378450.396825397
[2026-04-01 00:09:21] 2026-03-31 22:08:09,330 | INFO     | intersect: 2378450.396825397
[2026-04-01 00:09:21] 2026-03-31 22:08:09,330 | INFO     | chi2: 10.698925199768642
[2026-04-01 00:09:21] 2026-03-31 22:08:09,331 | INFO     | sum of square deviations: 4672638308.0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,333 | INFO     | sum of deviations: 191841619868.0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,333 | INFO     | mean x (centered): 0.0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,333 | INFO     | mean y: 2393952.4615384615
[2026-04-01 00:09:21] 2026-03-31 22:08:09,333 | INFO     | intersect: 2393952.4615384615
[2026-04-01 00:09:21] 2026-03-31 22:08:09,334 | INFO     | chi2: 9.24562348944433
[2026-04-01 00:09:21] 2026-03-31 22:08:09,334 | INFO     | current chi2=9.24562348944433 (change=13.583623431218475 %)
[2026-04-01 00:09:21] 2026-03-31 22:08:09,334 | INFO     | right removable region: 246
[2026-04-01 00:09:21] 2026-03-31 22:08:09,335 | INFO     | sum of square deviations: 4672638308.0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,340 | INFO     | sum of deviations: 73320885590.99997
[2026-04-01 00:09:21] 2026-03-31 22:08:09,340 | INFO     | mean x (centered): 0.0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,340 | INFO     | mean y: 2425144.882591093
[2026-04-01 00:09:21] 2026-03-31 22:08:09,340 | INFO     | intersect: 2425144.882591093
[2026-04-01 00:09:21] 2026-03-31 22:08:09,341 | INFO     | chi2: 5.306454234286598
[2026-04-01 00:09:21] 2026-03-31 22:08:09,341 | INFO     | current chi2=5.306454234286598 (change=50.40198772114655 %)
[2026-04-01 00:09:21] 2026-03-31 22:08:09,341 | INFO     | sum of square deviations: 4394577280.5
[2026-04-01 00:09:21] 2026-03-31 22:08:09,343 | INFO     | sum of deviations: 2579348125.499998
[2026-04-01 00:09:21] 2026-03-31 22:08:09,344 | INFO     | mean x (centered): 0.0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,344 | INFO     | mean y: 2463906.987603306
[2026-04-01 00:09:21] 2026-03-31 22:08:09,344 | INFO     | intersect: 2463906.987603306
[2026-04-01 00:09:21] 2026-03-31 22:08:09,344 | INFO     | chi2: 2.1716845846197046
[2026-04-01 00:09:21] 2026-03-31 22:08:09,345 | INFO     | current chi2=2.1716845846197046 (change=59.074657224257265 %)
[2026-04-01 00:09:21] 2026-03-31 22:08:09,345 | INFO     | sum of square deviations: 4127772278.0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,347 | INFO     | sum of deviations: -22859425297.0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,347 | INFO     | mean x (centered): 0.0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,347 | INFO     | mean y: 2478366.3966244725
[2026-04-01 00:09:21] 2026-03-31 22:08:09,347 | INFO     | intersect: 2478366.3966244725
[2026-04-01 00:09:21] 2026-03-31 22:08:09,348 | INFO     | chi2: 1.6481580309215382
[2026-04-01 00:09:21] 2026-03-31 22:08:09,348 | INFO     | current chi2=1.6481580309215382 (change=24.10693327225712 %)
[2026-04-01 00:09:21] 2026-03-31 22:08:09,348 | INFO     | left removable region: 15
[2026-04-01 00:09:21] 2026-03-31 22:08:09,348 | INFO     | sum of square deviations: 3822136780.0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,350 | INFO     | sum of deviations: 8769529275.0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,350 | INFO     | mean x (centered): 0.0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,351 | INFO     | mean y: 2496982.6363636362
[2026-04-01 00:09:21] 2026-03-31 22:08:09,351 | INFO     | intersect: 2496982.6363636362
[2026-04-01 00:09:21] 2026-03-31 22:08:09,351 | INFO     | chi2: 0.015850860808202256
[2026-04-01 00:09:21] 2026-03-31 22:08:09,351 | INFO     | current memory leak: 2.29 B/s (using 231 data points, chi2=0.02)
[2026-04-01 00:09:21] 2026-03-31 22:08:09,352 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-01 00:09:21] 2026-03-31 22:08:09,352 | INFO     | ..............................
[2026-04-01 00:09:21] 2026-03-31 22:08:09,352 | INFO     | . Timing measurements:
[2026-04-01 00:09:21] 2026-03-31 22:08:09,352 | INFO     | . get job = 0 s
[2026-04-01 00:09:21] 2026-03-31 22:08:09,352 | INFO     | . initial setup = 122 s
[2026-04-01 00:09:21] 2026-03-31 22:08:09,352 | INFO     | . payload setup = 286 s
[2026-04-01 00:09:21] 2026-03-31 22:08:09,352 | INFO     | . stage-in = 0 s
[2026-04-01 00:09:21] 2026-03-31 22:08:09,353 | INFO     | . payload execution = 15435 s
[2026-04-01 00:09:21] 2026-03-31 22:08:09,353 | INFO     | . stage-out = 3 s
[2026-04-01 00:09:21] 2026-03-31 22:08:09,353 | INFO     | . log creation = 1 s
[2026-04-01 00:09:21] 2026-03-31 22:08:09,353 | INFO     | ..............................
[2026-04-01 00:09:21] 2026-03-31 22:08:09,465 | INFO     | 
[2026-04-01 00:09:21] 2026-03-31 22:08:09,465 | INFO     | job summary report
[2026-04-01 00:09:21] 2026-03-31 22:08:09,465 | INFO     | --------------------------------------------------
[2026-04-01 00:09:21] 2026-03-31 22:08:09,465 | INFO     | PanDA job id: 7072876333
[2026-04-01 00:09:21] 2026-03-31 22:08:09,465 | INFO     | task id: 49263191
[2026-04-01 00:09:21] 2026-03-31 22:08:09,465 | INFO     | errors: (none)
[2026-04-01 00:09:21] 2026-03-31 22:08:09,465 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 00:09:21] 2026-03-31 22:08:09,466 | INFO     | pilot state: finished 
[2026-04-01 00:09:21] 2026-03-31 22:08:09,466 | INFO     | transexitcode: 0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,466 | INFO     | exeerrorcode: 0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,466 | INFO     | exeerrordiag: 
[2026-04-01 00:09:21] 2026-03-31 22:08:09,466 | INFO     | exitcode: 0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,466 | INFO     | exitmsg: OK
[2026-04-01 00:09:21] 2026-03-31 22:08:09,466 | INFO     | cpuconsumptiontime: 56838 s
[2026-04-01 00:09:21] 2026-03-31 22:08:09,466 | INFO     | nevents: 400
[2026-04-01 00:09:21] 2026-03-31 22:08:09,466 | INFO     | neventsw: 0
[2026-04-01 00:09:21] 2026-03-31 22:08:09,466 | INFO     | pid: 22312
[2026-04-01 00:09:21] 2026-03-31 22:08:09,466 | INFO     | pgrp: 22312
[2026-04-01 00:09:21] 2026-03-31 22:08:09,466 | INFO     | corecount: 8
[2026-04-01 00:09:21] 2026-03-31 22:08:09,467 | INFO     | event service: False
[2026-04-01 00:09:21] 2026-03-31 22:08:09,470 | INFO     | sizes: {0: 2279736, 1: 2280193, 2: 2281621, 12: 2281649, 15726: 2312829, 15729: 2321827, 15730: 2322011, 15733: 2322205}
[2026-04-01 00:09:21] 2026-03-31 22:08:09,470 | INFO     | --------------------------------------------------
[2026-04-01 00:09:21] 2026-03-31 22:08:09,470 | INFO     | 
[2026-04-01 00:09:21] 2026-03-31 22:08:09,470 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-04-01 00:09:21] 2026-03-31 22:08:09,979 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,979 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,979 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,979 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,980 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,980 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,980 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,980 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,980 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,980 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,980 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,980 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,980 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,980 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,980 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,980 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,980 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,980 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 00:09:21] 2026-03-31 22:08:09,980 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,981 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 00:09:21] 2026-03-31 22:08:09,981 | INFO     | job 7072876333 has completed (purged errors)
[2026-04-01 00:09:21] 2026-03-31 22:08:09,981 | INFO     | overall cleanup function is called
[2026-04-01 00:09:21] 2026-03-31 22:08:10,989 | INFO     | --- collectZombieJob: --- 10, [22312]
[2026-04-01 00:09:21] 2026-03-31 22:08:10,989 | INFO     | zombie collector waiting for pid 22312
[2026-04-01 00:09:21] 2026-03-31 22:08:10,989 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 00:09:21] 2026-03-31 22:08:10,989 | INFO     | collected zombie processes
[2026-04-01 00:09:21] 2026-03-31 22:08:10,989 | INFO     | will attempt to kill all subprocesses of pid=22312
[2026-04-01 00:09:21] 2026-03-31 22:08:11,068 | INFO     | process IDs to be killed: [22312] (in reverse order)
[2026-04-01 00:09:21] 2026-03-31 22:08:11,871 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 00:09:21] 2026-03-31 22:08:11,872 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 00:09:21] 2026-03-31 22:08:11,874 | INFO     | did not find any defunct processes belonging to 22312
[2026-04-01 00:09:21] 2026-03-31 22:08:11,875 | INFO     | did not find any defunct processes belonging to 22312
[2026-04-01 00:09:21] 2026-03-31 22:08:11,876 | INFO     | Ready for new job
[2026-04-01 00:09:21] 2026-03-31 22:08:11,877 | INFO     | **************************************
[2026-04-01 00:09:21] 2026-03-31 22:08:11,878 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-01 00:09:21] 2026-03-31 22:08:11,878 | INFO     | **************************************
[2026-04-01 00:09:21] 2026-03-31 22:08:11,878 | INFO     | 
[2026-04-01 00:09:21] 2026-03-31 22:08:11,878 | INFO     | pilot is running in a VM
[2026-04-01 00:09:21] 2026-03-31 22:08:11,879 | INFO     | architecture information:
[2026-04-01 00:09:21] 2026-03-31 22:08:11,886 | INFO     | executing command: cat /etc/os-release
[2026-04-01 00:09:21] 2026-03-31 22:08:12,084 | INFO     | cat /etc/os-release:
[2026-04-01 00:09:21] NAME="CentOS Linux"
[2026-04-01 00:09:21] VERSION="7 (Core)"
[2026-04-01 00:09:21] ID="centos"
[2026-04-01 00:09:21] ID_LIKE="rhel fedora"
[2026-04-01 00:09:21] VERSION_ID="7"
[2026-04-01 00:09:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 00:09:21] ANSI_COLOR="0;31"
[2026-04-01 00:09:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 00:09:21] HOME_URL="https://www.centos.org/"
[2026-04-01 00:09:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 00:09:21] 
[2026-04-01 00:09:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 00:09:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 00:09:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 00:09:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 00:09:21] 
[2026-04-01 00:09:21] 2026-03-31 22:08:12,085 | INFO     | **************************************
[2026-04-01 00:09:21] 2026-03-31 22:08:12,588 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-04-01 00:09:21] 2026-03-31 22:08:12,835 | INFO     | sufficient remaining disk space (496652779520 B)
[2026-04-01 00:09:21] 2026-03-31 22:08:12,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 00:09:21] 2026-03-31 22:08:12,835 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 00:09:21] 2026-03-31 22:08:12,836 | INFO     | update_server=False
[2026-04-01 00:09:21] 2026-03-31 22:08:12,836 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-01 00:09:21] 2026-03-31 22:08:12,837 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 00:09:21] 2026-03-31 22:08:12,837 | INFO     | aborting loop
[2026-04-01 00:09:21] 2026-03-31 22:08:12,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 00:09:21] 2026-03-31 22:08:13,613 | INFO     | all data control threads have been joined
[2026-04-01 00:09:21] 2026-03-31 22:08:13,645 | INFO     | all job control threads have been joined
[2026-04-01 00:09:21] 2026-03-31 22:08:13,842 | INFO     | [job] retrieve thread has finished
[2026-04-01 00:09:21] 2026-03-31 22:08:13,843 | INFO     | [job] job monitor thread has finished
[2026-04-01 00:09:21] 2026-03-31 22:08:13,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 00:09:21] 2026-03-31 22:08:14,067 | INFO     | all payload control threads have been joined
[2026-04-01 00:09:21] 2026-03-31 22:08:14,220 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 00:09:21] 2026-03-31 22:08:14,277 | INFO     | [data] copytool_in thread has finished
[2026-04-01 00:09:21] 2026-03-31 22:08:14,444 | INFO     | [payload] validate_post thread has finished
[2026-04-01 00:09:21] 2026-03-31 22:08:14,459 | INFO     | [payload] failed_post thread has finished
[2026-04-01 00:09:21] 2026-03-31 22:08:14,482 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 00:09:21] 2026-03-31 22:08:14,601 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 00:09:21] 2026-03-31 22:08:14,619 | INFO     | [data] control thread has finished
[2026-04-01 00:09:21] 2026-03-31 22:08:14,651 | INFO     | [job] control thread has finished
[2026-04-01 00:09:21] 2026-03-31 22:08:14,785 | INFO     | [job] validate thread has finished
[2026-04-01 00:09:21] 2026-03-31 22:08:15,034 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 00:09:21] 2026-03-31 22:08:15,073 | INFO     | [payload] control thread has finished
[2026-04-01 00:09:21] 2026-03-31 22:08:15,488 | INFO     | [job] queue monitor thread has finished
[2026-04-01 00:09:21] 2026-03-31 22:08:15,946 | INFO     | [data] copytool_out thread has finished
[2026-04-01 00:09:21] 2026-03-31 22:08:16,848 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 00:09:21] 2026-03-31 22:08:23,676 | INFO     | job.realtimelogging is not enabled
[2026-04-01 00:09:21] 2026-03-31 22:08:24,682 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 00:09:21] 2026-03-31 22:08:41,910 | INFO     | PID=17871 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-01 00:09:21] 2026-03-31 22:08:41,910 | INFO     | .. there are 2 such processes running
[2026-04-01 00:09:21] 2026-03-31 22:08:41,911 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 00:09:21] 2026-03-31 22:08:41,911 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 00:09:21] 2026-03-31 22:08:41,911 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 00:09:21] 2026-03-31 22:09:10,571 | INFO     | [monitor] cgroup control has ended
[2026-04-01 00:09:21] 2026-03-31 22:09:10,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139674457085760)>', '<ExcThread(monitor, started 139673879967488)>']
[2026-04-01 00:09:21] 2026-03-31 22:09:11,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 00:09:21] 2026-03-31 22:09:11,085 | INFO     | [monitor] control thread has ended
[2026-04-01 00:09:21] 2026-03-31 22:09:15,731 | INFO     | all workflow threads have been joined
[2026-04-01 00:09:21] 2026-03-31 22:09:15,731 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 00:09:21] 2026-03-31 22:09:15,731 | INFO     | traces error code: 0
[2026-04-01 00:09:21] 2026-03-31 22:09:15,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 00:09:21] 2026-03-31 22:09:16,473 [wrapper] ==== pilot stdout END ====
[2026-04-01 00:09:21] 2026-03-31 22:09:16,612 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 00:09:21] 2026-03-31 22:09:16,703 [wrapper] pilotpid: 17871
[2026-04-01 00:09:21] 2026-03-31 22:09:16,818 [wrapper] Pilot exit status: 0
[2026-04-01 00:09:21] 2026-03-31 22:09:17,381 [wrapper] pandaids: 7072876333
[2026-04-01 00:09:21] 2026-03-31 22:09:18,645 [wrapper] cleanup supervisor_pilot 28297 17872
[2026-04-01 00:09:21] 2026-03-31 22:09:18,735 [wrapper] Test setup, not cleaning
[2026-04-01 00:09:21] 2026-03-31 22:09:18,768 [wrapper] apfmon messages muted
[2026-04-01 00:09:21] 2026-03-31 22:09:18,908 [wrapper] ==== wrapper stdout END ====
[2026-04-01 00:09:21] 2026-03-31 22:09:19,021 [wrapper] ==== wrapper stderr END ====
[2026-04-01 00:09:21]  *** Error codes and diagnostics ***
[2026-04-01 00:09:21]     "exeErrorCode": 0,
[2026-04-01 00:09:21]     "pilotErrorCode": 0,
[2026-04-01 00:09:21]  *** Listing of results directory ***
[2026-04-01 00:09:21] total 417880
[2026-04-01 00:09:21] -rw-r--r--. 1 boinc boinc    644034 Mar 31 07:48 pilot3.tar.gz
[2026-04-01 00:09:21] -rw-r--r--. 1 boinc boinc      5118 Mar 31 07:54 queuedata.json
[2026-04-01 00:09:21] -rwx------. 1 boinc boinc     36322 Mar 31 07:54 runpilot2-wrapper.sh
[2026-04-01 00:09:21] -rw-r--r--. 1 boinc boinc       100 Mar 31 19:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 00:09:21] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 19:38 run_atlas
[2026-04-01 00:09:21] -rw-r--r--. 1 boinc boinc       105 Mar 31 19:38 job.xml
[2026-04-01 00:09:21] -rw-r--r--. 1 boinc boinc      6391 Mar 31 19:38 init_data.xml
[2026-04-01 00:09:21] -rw-r--r--. 2 boinc boinc 225634386 Mar 31 19:38 EVNT.49263189._000538.pool.root.1
[2026-04-01 00:09:21] -rw-r--r--. 2 boinc boinc     15845 Mar 31 19:38 start_atlas.sh
[2026-04-01 00:09:21] drwxrwx--x. 2 boinc boinc        68 Mar 31 19:38 shared
[2026-04-01 00:09:21] -rw-r--r--. 2 boinc boinc    656755 Mar 31 19:38 input.tar.gz
[2026-04-01 00:09:21] -rw-r--r--. 1 boinc boinc         0 Mar 31 19:38 boinc_lockfile
[2026-04-01 00:09:21] -rw-r--r--. 1 boinc boinc      2577 Mar 31 19:39 pandaJob.out
[2026-04-01 00:09:21] -rw-------. 1 boinc boinc       415 Mar 31 19:45 workernode_map.json
[2026-04-01 00:09:21] -rw-------. 1 boinc boinc   1005014 Mar 31 19:45 agis_schedconf.cvmfs.json
[2026-04-01 00:09:21] drwx------. 5 boinc boinc      4096 Mar 31 19:45 pilot3
[2026-04-01 00:09:21] -rw-------. 1 boinc boinc 194487701 Apr  1 00:06 HITS.49263191._013433.pool.root.1
[2026-04-01 00:09:21] -rw-r--r--. 1 boinc boinc       530 Apr  1 00:06 boinc_task_state.xml
[2026-04-01 00:09:21] -rw-------. 1 boinc boinc      1012 Apr  1 00:07 memory_monitor_summary.json
[2026-04-01 00:09:21] -rw-------. 1 boinc boinc        95 Apr  1 00:07 pilot_heartbeat.json
[2026-04-01 00:09:21] -rw-------. 1 boinc boinc   1511579 Apr  1 00:08 agis_ddmendpoints.agis.ALL.json
[2026-04-01 00:09:21] -rw-------. 1 boinc boinc    401229 Apr  1 00:08 log.49263191._013433.job.log.tgz.1
[2026-04-01 00:09:21] -rw-------. 1 boinc boinc      6338 Apr  1 00:08 heartbeat_new.json
[2026-04-01 00:09:21] -rw-------. 1 boinc boinc      6229 Apr  1 00:08 heartbeat.json
[2026-04-01 00:09:21] -rw-r--r--. 1 boinc boinc      8192 Apr  1 00:08 boinc_mmap_file
[2026-04-01 00:09:21] -rw-r--r--. 1 boinc boinc        28 Apr  1 00:08 wrapper_checkpoint.txt
[2026-04-01 00:09:21] -rw-------. 1 boinc boinc      4951 Apr  1 00:09 pilotlog.txt
[2026-04-01 00:09:21] -rw-------. 1 boinc boinc   1463427 Apr  1 00:09 log.49263191._013433.job.log.1
[2026-04-01 00:09:21] -rw-------. 1 boinc boinc       357 Apr  1 00:09 output.list
[2026-04-01 00:09:21] -rw-r--r--. 1 boinc boinc       620 Apr  1 00:09 runtime_log
[2026-04-01 00:09:21] -rw-------. 1 boinc boinc   1884160 Apr  1 00:09 result.tar.gz
[2026-04-01 00:09:21] -rw-r--r--. 1 boinc boinc      8816 Apr  1 00:09 runtime_log.err
[2026-04-01 00:09:21] -rw-------. 1 boinc boinc       656 Apr  1 00:09 o7rLDmAFhR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmK9RKDmLXRaFn.diag
[2026-04-01 00:09:21] -rw-r--r--. 1 boinc boinc     20619 Apr  1 00:09 stderr.txt
[2026-04-01 00:09:21] HITS file was successfully produced:
[2026-04-01 00:09:21] -rw-------. 1 boinc boinc 194487701 Apr  1 00:06 shared/HITS.pool.root.1
[2026-04-01 00:09:21]  *** Contents of shared directory: ***
[2026-04-01 00:09:21] total 412780
[2026-04-01 00:09:21] -rw-r--r--. 2 boinc boinc 225634386 Mar 31 19:38 ATLAS.root_0
[2026-04-01 00:09:21] -rw-r--r--. 2 boinc boinc     15845 Mar 31 19:38 start_atlas.sh
[2026-04-01 00:09:21] -rw-r--r--. 2 boinc boinc    656755 Mar 31 19:38 input.tar.gz
[2026-04-01 00:09:21] -rw-------. 1 boinc boinc 194487701 Apr  1 00:06 HITS.pool.root.1
[2026-04-01 00:09:21] -rw-------. 1 boinc boinc   1884160 Apr  1 00:09 result.tar.gz
00:09:22 (13881): run_atlas exited; CPU time 56987.179744
00:09:22 (13881): called boinc_finish(0)

</stderr_txt>
]]>

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