Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
11:53:20 (3348782): wrapper (7.7.26015): starting
11:53:20 (3348782): wrapper: running run_atlas (--nthreads 4)
[2026-03-31 11:53:20] Arguments: --nthreads 4
[2026-03-31 11:53:20] Threads: 4
[2026-03-31 11:53:20] Checking for CVMFS
[2026-03-31 11:53:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 11:53:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 11:53:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 11:53:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 11:53:21] 2.13.3.0 6294 5300 56068 157915 0 50 2403390 4096001 6454 130560 0 13973548 99.978 269325 1300 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-31 11:53:21] CVMFS is ok
[2026-03-31 11:53:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 11:53:21] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-31 11:53:21] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-31 11:53:21] Further information can be found at the LHC@home message board.
[2026-03-31 11:53:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 11:53:21] Checking for apptainer binary...
[2026-03-31 11:53:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 11:53:21] Running /usr/bin/apptainer --version
[2026-03-31 11:53:21] apptainer version 1.4.5
[2026-03-31 11:53:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 11:53:21] X-32-ubuntu
[2026-03-31 11:53:21] apptainer works
[2026-03-31 11:53:21] Set ATHENA_PROC_NUMBER=4
[2026-03-31 11:53:21] Set ATHENA_CORE_NUMBER=4
[2026-03-31 11:53:21] Starting ATLAS job with PandaID=7074878313
[2026-03-31 11:53:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 13:46:55]  *** The last 200 lines of the pilot log: ***
[2026-03-31 13:46:55] 2026-03-31 17:46:22,920 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7074878313/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 13:46:55] 2026-03-31 17:46:23,079 | INFO     | number of running child processes to parent process 3357530: 1
[2026-03-31 13:46:55] 2026-03-31 17:46:23,079 | INFO     | maximum number of monitored processes: 6
[2026-03-31 13:46:55] 2026-03-31 17:46:23,579 | INFO     | job 7074878313 has state=finished
[2026-03-31 13:46:55] 2026-03-31 17:46:23,579 | INFO     | preparing for final server update for job 7074878313 in state='finished'
[2026-03-31 13:46:55] 2026-03-31 17:46:23,579 | INFO     | reading metadata from: /var/lib/boinc/slots/7/PanDA_Pilot-7074878313/jobReport.json
[2026-03-31 13:46:55] 2026-03-31 17:46:23,581 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/7/workernode_map.json
[2026-03-31 13:46:55] 2026-03-31 17:46:23,581 | INFO     | this job has now completed (state=finished)
[2026-03-31 13:46:55] 2026-03-31 17:46:23,581 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 13:46:55] 2026-03-31 17:46:23,581 | INFO     | log transfer has been attempted: DONE
[2026-03-31 13:46:55] 2026-03-31 17:46:23,581 | INFO     | job 7074878313 has finished - writing final server update
[2026-03-31 13:46:55] 2026-03-31 17:46:23,582 | INFO     | total number of processed events: 400 (read)
[2026-03-31 13:46:55] 2026-03-31 17:46:23,586 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7074878313/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 13:46:55] 2026-03-31 17:46:23,586 | INFO     | extracted standard info from prmon json
[2026-03-31 13:46:55] 2026-03-31 17:46:23,586 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 13:46:55] 2026-03-31 17:46:23,587 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 13:46:55] 2026-03-31 17:46:23,587 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 13:46:55] 2026-03-31 17:46:23,588 | INFO     | fitting pss+swap vs Time
[2026-03-31 13:46:55] 2026-03-31 17:46:23,588 | INFO     | sum of square deviations: 424045160.0
[2026-03-31 13:46:55] 2026-03-31 17:46:23,589 | INFO     | sum of deviations: -11156486846.999994
[2026-03-31 13:46:55] 2026-03-31 17:46:23,589 | INFO     | mean x (centered): 0.0
[2026-03-31 13:46:55] 2026-03-31 17:46:23,589 | INFO     | mean y: 2378420.864864865
[2026-03-31 13:46:55] 2026-03-31 17:46:23,589 | INFO     | intersect: 2378420.864864865
[2026-03-31 13:46:55] 2026-03-31 17:46:23,589 | INFO     | chi2: 1.3417560658183987
[2026-03-31 13:46:55] 2026-03-31 17:46:23,589 | INFO     | sum of square deviations: 369281342.5
[2026-03-31 13:46:55] 2026-03-31 17:46:23,590 | INFO     | sum of deviations: -10336080736.5
[2026-03-31 13:46:55] 2026-03-31 17:46:23,590 | INFO     | mean x (centered): 0.0
[2026-03-31 13:46:55] 2026-03-31 17:46:23,590 | INFO     | mean y: 2380707.9905660376
[2026-03-31 13:46:55] 2026-03-31 17:46:23,590 | INFO     | intersect: 2380707.9905660376
[2026-03-31 13:46:55] 2026-03-31 17:46:23,590 | INFO     | chi2: 1.3366093714636131
[2026-03-31 13:46:55] 2026-03-31 17:46:23,590 | INFO     | current chi2=1.3366093714636131 (change=0.38357898919922795 %)
[2026-03-31 13:46:55] 2026-03-31 17:46:23,590 | INFO     | right removable region: 105
[2026-03-31 13:46:55] 2026-03-31 17:46:23,590 | INFO     | sum of square deviations: 369281342.5
[2026-03-31 13:46:55] 2026-03-31 17:46:23,591 | INFO     | sum of deviations: -20270931349.999996
[2026-03-31 13:46:55] 2026-03-31 17:46:23,591 | INFO     | mean x (centered): 0.0
[2026-03-31 13:46:55] 2026-03-31 17:46:23,591 | INFO     | mean y: 2402775.2641509436
[2026-03-31 13:46:55] 2026-03-31 17:46:23,591 | INFO     | intersect: 2402775.2641509436
[2026-03-31 13:46:55] 2026-03-31 17:46:23,591 | INFO     | chi2: 0.1768348647877614
[2026-03-31 13:46:55] 2026-03-31 17:46:23,591 | INFO     | current chi2=0.1768348647877614 (change=86.82063980982254 %)
[2026-03-31 13:46:55] 2026-03-31 17:46:23,591 | INFO     | sum of square deviations: 319447850.0
[2026-03-31 13:46:55] 2026-03-31 17:46:23,592 | INFO     | sum of deviations: -15324086635.000002
[2026-03-31 13:46:55] 2026-03-31 17:46:23,592 | INFO     | mean x (centered): 0.0
[2026-03-31 13:46:55] 2026-03-31 17:46:23,592 | INFO     | mean y: 2387612.8514851485
[2026-03-31 13:46:55] 2026-03-31 17:46:23,592 | INFO     | intersect: 2387612.8514851485
[2026-03-31 13:46:55] 2026-03-31 17:46:23,592 | INFO     | chi2: 0.1590775824051646
[2026-03-31 13:46:55] 2026-03-31 17:46:23,592 | INFO     | current chi2=0.1590775824051646 (change=10.041731535186363 %)
[2026-03-31 13:46:55] 2026-03-31 17:46:23,592 | INFO     | left removable region: 10
[2026-03-31 13:46:55] 2026-03-31 17:46:23,592 | INFO     | sum of square deviations: 265828240.0
[2026-03-31 13:46:55] 2026-03-31 17:46:23,593 | INFO     | sum of deviations: -14255052423.999998
[2026-03-31 13:46:55] 2026-03-31 17:46:23,593 | INFO     | mean x (centered): 0.0
[2026-03-31 13:46:55] 2026-03-31 17:46:23,593 | INFO     | mean y: 2391267.642105263
[2026-03-31 13:46:55] 2026-03-31 17:46:23,593 | INFO     | intersect: 2391267.642105263
[2026-03-31 13:46:55] 2026-03-31 17:46:23,593 | INFO     | chi2: 0.15035172860462864
[2026-03-31 13:46:55] 2026-03-31 17:46:23,593 | INFO     | current memory leak: -53.63 B/s (using 95 data points, chi2=0.15)
[2026-03-31 13:46:55] 2026-03-31 17:46:23,593 | INFO     | could have reported an average CPU frequency of 3913 MHz (7 samples)
[2026-03-31 13:46:55] 2026-03-31 17:46:23,593 | INFO     | ..............................
[2026-03-31 13:46:55] 2026-03-31 17:46:23,593 | INFO     | . Timing measurements:
[2026-03-31 13:46:55] 2026-03-31 17:46:23,594 | INFO     | . get job = 0 s
[2026-03-31 13:46:55] 2026-03-31 17:46:23,594 | INFO     | . initial setup = 4 s
[2026-03-31 13:46:55] 2026-03-31 17:46:23,594 | INFO     | . payload setup = 8 s
[2026-03-31 13:46:55] 2026-03-31 17:46:23,594 | INFO     | . stage-in = 0 s
[2026-03-31 13:46:55] 2026-03-31 17:46:23,594 | INFO     | . payload execution = 6742 s
[2026-03-31 13:46:55] 2026-03-31 17:46:23,594 | INFO     | . stage-out = 0 s
[2026-03-31 13:46:55] 2026-03-31 17:46:23,594 | INFO     | . log creation = 0 s
[2026-03-31 13:46:55] 2026-03-31 17:46:23,594 | INFO     | ..............................
[2026-03-31 13:46:55] 2026-03-31 17:46:23,915 | INFO     | 
[2026-03-31 13:46:55] 2026-03-31 17:46:23,915 | INFO     | job summary report
[2026-03-31 13:46:55] 2026-03-31 17:46:23,915 | INFO     | --------------------------------------------------
[2026-03-31 13:46:55] 2026-03-31 17:46:23,915 | INFO     | PanDA job id: 7074878313
[2026-03-31 13:46:55] 2026-03-31 17:46:23,915 | INFO     | task id: 49499874
[2026-03-31 13:46:55] 2026-03-31 17:46:23,915 | INFO     | errors: (none)
[2026-03-31 13:46:55] 2026-03-31 17:46:23,915 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 13:46:55] 2026-03-31 17:46:23,915 | INFO     | pilot state: finished 
[2026-03-31 13:46:55] 2026-03-31 17:46:23,915 | INFO     | transexitcode: 0
[2026-03-31 13:46:55] 2026-03-31 17:46:23,915 | INFO     | exeerrorcode: 0
[2026-03-31 13:46:55] 2026-03-31 17:46:23,915 | INFO     | exeerrordiag: 
[2026-03-31 13:46:55] 2026-03-31 17:46:23,915 | INFO     | exitcode: 0
[2026-03-31 13:46:55] 2026-03-31 17:46:23,915 | INFO     | exitmsg: OK
[2026-03-31 13:46:55] 2026-03-31 17:46:23,916 | INFO     | cpuconsumptiontime: 25849 s
[2026-03-31 13:46:55] 2026-03-31 17:46:23,916 | INFO     | nevents: 400
[2026-03-31 13:46:55] 2026-03-31 17:46:23,916 | INFO     | neventsw: 0
[2026-03-31 13:46:55] 2026-03-31 17:46:23,916 | INFO     | pid: 3357530
[2026-03-31 13:46:55] 2026-03-31 17:46:23,916 | INFO     | pgrp: 3357530
[2026-03-31 13:46:55] 2026-03-31 17:46:23,916 | INFO     | corecount: 4
[2026-03-31 13:46:55] 2026-03-31 17:46:23,916 | INFO     | event service: False
[2026-03-31 13:46:55] 2026-03-31 17:46:23,916 | INFO     | sizes: {0: 2279977, 1: 2281551, 11: 2281579, 6754: 2308814, 6755: 2317868, 6757: 2318006}
[2026-03-31 13:46:55] 2026-03-31 17:46:23,916 | INFO     | --------------------------------------------------
[2026-03-31 13:46:55] 2026-03-31 17:46:23,916 | INFO     | 
[2026-03-31 13:46:55] 2026-03-31 17:46:23,916 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-03-31 13:46:55] 2026-03-31 17:46:23,938 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,939 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,939 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,939 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,939 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,939 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,939 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,939 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,939 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,939 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,939 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,939 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,939 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,939 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,939 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,939 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,940 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,940 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 13:46:55] 2026-03-31 17:46:23,940 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,940 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 13:46:55] 2026-03-31 17:46:23,940 | INFO     | job 7074878313 has completed (purged errors)
[2026-03-31 13:46:55] 2026-03-31 17:46:23,940 | INFO     | overall cleanup function is called
[2026-03-31 13:46:55] 2026-03-31 17:46:24,947 | INFO     | --- collectZombieJob: --- 10, [3357530]
[2026-03-31 13:46:55] 2026-03-31 17:46:24,948 | INFO     | zombie collector waiting for pid 3357530
[2026-03-31 13:46:55] 2026-03-31 17:46:24,948 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 13:46:55] 2026-03-31 17:46:24,948 | INFO     | collected zombie processes
[2026-03-31 13:46:55] 2026-03-31 17:46:24,948 | INFO     | will attempt to kill all subprocesses of pid=3357530
[2026-03-31 13:46:55] 2026-03-31 17:46:25,115 | INFO     | process IDs to be killed: [3357530] (in reverse order)
[2026-03-31 13:46:55] 2026-03-31 17:46:25,177 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 13:46:55] 2026-03-31 17:46:25,177 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 13:46:55] 2026-03-31 17:46:25,181 | INFO     | did not find any defunct processes belonging to 3357530
[2026-03-31 13:46:55] 2026-03-31 17:46:25,186 | INFO     | did not find any defunct processes belonging to 3357530
[2026-03-31 13:46:55] 2026-03-31 17:46:25,186 | INFO     | Ready for new job
[2026-03-31 13:46:55] 2026-03-31 17:46:25,187 | INFO     | **************************************
[2026-03-31 13:46:55] 2026-03-31 17:46:25,187 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 13:46:55] 2026-03-31 17:46:25,187 | INFO     | **************************************
[2026-03-31 13:46:55] 2026-03-31 17:46:25,187 | INFO     | 
[2026-03-31 13:46:55] 2026-03-31 17:46:25,189 | INFO     | architecture information:
[2026-03-31 13:46:55] 2026-03-31 17:46:25,189 | INFO     | executing command: cat /etc/os-release
[2026-03-31 13:46:55] 2026-03-31 17:46:25,202 | INFO     | cat /etc/os-release:
[2026-03-31 13:46:55] NAME="CentOS Linux"
[2026-03-31 13:46:55] VERSION="7 (Core)"
[2026-03-31 13:46:55] ID="centos"
[2026-03-31 13:46:55] ID_LIKE="rhel fedora"
[2026-03-31 13:46:55] VERSION_ID="7"
[2026-03-31 13:46:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 13:46:55] ANSI_COLOR="0;31"
[2026-03-31 13:46:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 13:46:55] HOME_URL="https://www.centos.org/"
[2026-03-31 13:46:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 13:46:55] 
[2026-03-31 13:46:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 13:46:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 13:46:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 13:46:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 13:46:55] 
[2026-03-31 13:46:55] 2026-03-31 17:46:25,202 | INFO     | **************************************
[2026-03-31 13:46:55] 2026-03-31 17:46:25,705 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-03-31 13:46:55] 2026-03-31 17:46:25,720 | INFO     | sufficient remaining disk space (1801184083968 B)
[2026-03-31 13:46:55] 2026-03-31 17:46:25,721 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 13:46:55] 2026-03-31 17:46:25,721 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 13:46:55] 2026-03-31 17:46:25,721 | INFO     | update_server=False
[2026-03-31 13:46:55] 2026-03-31 17:46:25,721 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 13:46:55] 2026-03-31 17:46:25,721 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 13:46:55] 2026-03-31 17:46:26,154 | INFO     | all data control threads have been joined
[2026-03-31 13:46:55] 2026-03-31 17:46:26,587 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 13:46:55] 2026-03-31 17:46:26,587 | INFO     | aborting loop
[2026-03-31 13:46:55] 2026-03-31 17:46:26,726 | INFO     | [job] retrieve thread has finished
[2026-03-31 13:46:55] 2026-03-31 17:46:26,770 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 13:46:55] 2026-03-31 17:46:26,948 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 13:46:55] 2026-03-31 17:46:26,983 | INFO     | [payload] validate_post thread has finished
[2026-03-31 13:46:55] 2026-03-31 17:46:27,056 | INFO     | all payload control threads have been joined
[2026-03-31 13:46:55] 2026-03-31 17:46:27,072 | INFO     | [data] copytool_in thread has finished
[2026-03-31 13:46:55] 2026-03-31 17:46:27,079 | INFO     | [payload] failed_post thread has finished
[2026-03-31 13:46:55] 2026-03-31 17:46:27,140 | INFO     | all job control threads have been joined
[2026-03-31 13:46:55] 2026-03-31 17:46:27,160 | INFO     | [data] control thread has finished
[2026-03-31 13:46:55] 2026-03-31 17:46:27,592 | INFO     | [job] job monitor thread has finished
[2026-03-31 13:46:55] 2026-03-31 17:46:27,727 | INFO     | [data] copytool_out thread has finished
[2026-03-31 13:46:55] 2026-03-31 17:46:27,804 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 13:46:55] 2026-03-31 17:46:28,061 | INFO     | [payload] control thread has finished
[2026-03-31 13:46:55] 2026-03-31 17:46:28,076 | INFO     | [job] validate thread has finished
[2026-03-31 13:46:55] 2026-03-31 17:46:28,123 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 13:46:55] 2026-03-31 17:46:28,125 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 13:46:55] 2026-03-31 17:46:28,145 | INFO     | [job] control thread has finished
[2026-03-31 13:46:55] 2026-03-31 17:46:28,672 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 13:46:55] 2026-03-31 17:46:29,677 | INFO     | [job] queue monitor thread has finished
[2026-03-31 13:46:55] 2026-03-31 17:46:31,811 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 13:46:55] 2026-03-31 17:46:46,425 | INFO     | [monitor] cgroup control has ended
[2026-03-31 13:46:55] 2026-03-31 17:46:48,208 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124359543994176)>', '<ExcThread(monitor, started 124358815110912)>']
[2026-03-31 13:46:55] 2026-03-31 17:46:53,233 | INFO     | all workflow threads have been joined
[2026-03-31 13:46:55] 2026-03-31 17:46:53,233 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 13:46:55] 2026-03-31 17:46:53,233 | INFO     | traces error code: 0
[2026-03-31 13:46:55] 2026-03-31 17:46:53,233 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 13:46:55] 2026-03-31 17:46:55,277 | INFO     | PID=3352962 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-31 13:46:55] 2026-03-31 17:46:55,278 | INFO     | .. there are 8 such processes running
[2026-03-31 13:46:55] 2026-03-31 17:46:55,278 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 13:46:55] 2026-03-31 17:46:55,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 13:46:55] 2026-03-31 17:46:55,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 13:46:55] 2026-03-31 17:46:55,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 13:46:55] 2026-03-31 17:46:55,278 | CRITICAL | thread 'MainThread' is not alive
[2026-03-31 13:46:55] 2026-03-31 17:46:55,278 | INFO     | [monitor] control thread has ended
[2026-03-31 13:46:55] 2026-03-31 17:46:55,360 [wrapper] ==== pilot stdout END ====
[2026-03-31 13:46:55] 2026-03-31 17:46:55,363 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 13:46:55] 2026-03-31 17:46:55,365 [wrapper] pilotpid: 3352962
[2026-03-31 13:46:55] 2026-03-31 17:46:55,367 [wrapper] Pilot exit status: 0
[2026-03-31 13:46:55] 2026-03-31 17:46:55,375 [wrapper] pandaids: 7074878313
[2026-03-31 13:46:55] 2026-03-31 17:46:55,417 [wrapper] cleanup supervisor_pilot 3456446 3352963
[2026-03-31 13:46:55] 2026-03-31 17:46:55,419 [wrapper] Test setup, not cleaning
[2026-03-31 13:46:55] 2026-03-31 17:46:55,421 [wrapper] apfmon messages muted
[2026-03-31 13:46:55] 2026-03-31 17:46:55,424 [wrapper] ==== wrapper stdout END ====
[2026-03-31 13:46:55] 2026-03-31 17:46:55,426 [wrapper] ==== wrapper stderr END ====
[2026-03-31 13:46:55]  *** Error codes and diagnostics ***
[2026-03-31 13:46:55]     "exeErrorCode": 0,
[2026-03-31 13:46:55]     "pilotErrorCode": 0,
[2026-03-31 13:46:55]  *** Listing of results directory ***
[2026-03-31 13:46:55] total 468724
[2026-03-31 13:46:55] -rw-r--r-- 1 boinc boinc    644034 Mar 31 01:48 pilot3.tar.gz
[2026-03-31 13:46:55] -rwx------ 1 boinc boinc     36322 Mar 31 01:54 runpilot2-wrapper.sh
[2026-03-31 13:46:55] -rw-r--r-- 1 boinc boinc      5118 Mar 31 01:54 queuedata.json
[2026-03-31 13:46:55] -rw-r--r-- 1 boinc boinc       100 Mar 31 11:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 13:46:55] -rwxr-xr-x 1 boinc boinc      7986 Mar 31 11:53 run_atlas
[2026-03-31 13:46:55] -rw-r--r-- 1 boinc boinc       105 Mar 31 11:53 job.xml
[2026-03-31 13:46:55] -rw-r--r-- 1 boinc boinc      9669 Mar 31 11:53 init_data.xml
[2026-03-31 13:46:55] -rw-r--r-- 2 boinc boinc 294886050 Mar 31 11:53 EVNT.49475292._000001.pool.root.1
[2026-03-31 13:46:55] -rw-r--r-- 2 boinc boinc     15845 Mar 31 11:53 start_atlas.sh
[2026-03-31 13:46:55] drwxrwx--x 2 boinc boinc      4096 Mar 31 11:53 shared
[2026-03-31 13:46:55] -rw-r--r-- 2 boinc boinc    656719 Mar 31 11:53 input.tar.gz
[2026-03-31 13:46:55] -rw-r--r-- 1 boinc boinc         0 Mar 31 11:53 boinc_lockfile
[2026-03-31 13:46:55] -rw-r--r-- 1 boinc boinc      2546 Mar 31 11:53 pandaJob.out
[2026-03-31 13:46:55] -rw------- 1 boinc boinc   1003225 Mar 31 11:53 agis_schedconf.cvmfs.json
[2026-03-31 13:46:55] -rw------- 1 boinc boinc   1511579 Mar 31 11:53 agis_ddmendpoints.agis.ALL.json
[2026-03-31 13:46:55] -rw------- 1 boinc boinc       426 Mar 31 11:53 workernode_map.json
[2026-03-31 13:46:55] drwx------ 5 boinc boinc      4096 Mar 31 11:53 pilot3
[2026-03-31 13:46:55] -rw-r--r-- 1 boinc boinc       529 Mar 31 13:45 boinc_task_state.xml
[2026-03-31 13:46:55] -rw------- 1 boinc boinc 179179571 Mar 31 13:45 HITS.49499874._000013.pool.root.1
[2026-03-31 13:46:55] -rw------- 1 boinc boinc        95 Mar 31 13:46 pilot_heartbeat.json
[2026-03-31 13:46:55] -rw------- 1 boinc boinc      1022 Mar 31 13:46 memory_monitor_summary.json
[2026-03-31 13:46:55] -rw------- 1 boinc boinc    265711 Mar 31 13:46 log.49499874._000013.job.log.tgz.1
[2026-03-31 13:46:55] -rw------- 1 boinc boinc      6303 Mar 31 13:46 heartbeat_new.json
[2026-03-31 13:46:55] -rw------- 1 boinc boinc      6194 Mar 31 13:46 heartbeat.json
[2026-03-31 13:46:55] -rw-r--r-- 1 boinc boinc      8192 Mar 31 13:46 boinc_mmap_file
[2026-03-31 13:46:55] -rw-r--r-- 1 boinc boinc        27 Mar 31 13:46 wrapper_checkpoint.txt
[2026-03-31 13:46:55] -rw------- 1 boinc boinc       892 Mar 31 13:46 pilotlog.txt
[2026-03-31 13:46:55] -rw------- 1 boinc boinc    654693 Mar 31 13:46 log.49499874._000013.job.log.1
[2026-03-31 13:46:55] -rw------- 1 boinc boinc       357 Mar 31 13:46 output.list
[2026-03-31 13:46:55] -rw-r--r-- 1 boinc boinc       620 Mar 31 13:46 runtime_log
[2026-03-31 13:46:55] -rw------- 1 boinc boinc    942080 Mar 31 13:46 result.tar.gz
[2026-03-31 13:46:55] -rw-r--r-- 1 boinc boinc      8784 Mar 31 13:46 runtime_log.err
[2026-03-31 13:46:55] -rw------- 1 boinc boinc       644 Mar 31 13:46 H8bLDmfEhR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmv5RKDm2rgxHn.diag
[2026-03-31 13:46:55] -rw-r--r-- 1 boinc boinc     21226 Mar 31 13:46 stderr.txt
[2026-03-31 13:46:55] HITS file was successfully produced:
[2026-03-31 13:46:55] -rw------- 1 boinc boinc 179179571 Mar 31 13:45 shared/HITS.pool.root.1
[2026-03-31 13:46:55]  *** Contents of shared directory: ***
[2026-03-31 13:46:55] total 464548
[2026-03-31 13:46:55] -rw-r--r-- 2 boinc boinc 294886050 Mar 31 11:53 ATLAS.root_0
[2026-03-31 13:46:55] -rw-r--r-- 2 boinc boinc     15845 Mar 31 11:53 start_atlas.sh
[2026-03-31 13:46:55] -rw-r--r-- 2 boinc boinc    656719 Mar 31 11:53 input.tar.gz
[2026-03-31 13:46:55] -rw------- 1 boinc boinc 179179571 Mar 31 13:45 HITS.pool.root.1
[2026-03-31 13:46:55] -rw------- 1 boinc boinc    942080 Mar 31 13:46 result.tar.gz
13:46:56 (3348782): run_atlas exited; CPU time 25955.412713
13:46:56 (3348782): called boinc_finish(0)

</stderr_txt>
]]>

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