Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:45:46 (269939): wrapper (7.7.26015): starting
03:45:46 (269939): wrapper: running run_atlas (--nthreads 12)
[2026-04-01 03:45:46] Arguments: --nthreads 12
[2026-04-01 03:45:46] Threads: 12
[2026-04-01 03:45:46] Checking for CVMFS
[2026-04-01 03:45:46] No cvmfs_config command found, will try listing directly
[2026-04-01 03:45:46] CVMFS is ok
[2026-04-01 03:45:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-01 03:45:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-01 03:45:46] Further information can be found at the LHC@home message board.
[2026-04-01 03:45:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 03:45:46] Checking for apptainer binary...
[2026-04-01 03:45:46] which: no apptainer in ((null))
[2026-04-01 03:45:46] apptainer is not installed, using version from CVMFS
[2026-04-01 03:45:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 03:45:47] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot108/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-04-01 03:45:47] apptainer works
[2026-04-01 03:45:47] Set ATHENA_PROC_NUMBER=12
[2026-04-01 03:45:47] Set ATHENA_CORE_NUMBER=12
[2026-04-01 03:45:47] Starting ATLAS job with PandaID=7062586962
[2026-04-01 03:45:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot108/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 04:40:13]  *** The last 200 lines of the pilot log: ***
[2026-04-01 04:40:13]  lfn=log.49271105._000049.job.log.tgz.1
[2026-04-01 04:40:13]  mtime=0
[2026-04-01 04:40:13]  protocol_id=None
[2026-04-01 04:40:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-01 04:40:13]  replicas=None
[2026-04-01 04:40:13]  scope=mc23_13p6TeV
[2026-04-01 04:40:13]  status=None
[2026-04-01 04:40:13]  status_code=0
[2026-04-01 04:40:13]  storage_token=
[2026-04-01 04:40:13]  surl=/var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7062586962/log.49271105._000049.job.log.tgz.1
[2026-04-01 04:40:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/f5/log.49271105._000049.job.log.tgz.1
[2026-04-01 04:40:13]  workdir=None
[2026-04-01 04:40:13] ]
[2026-04-01 04:40:13] 2026-04-01 02:39:37,286 | INFO     | transferring file log.49271105._000049.job.log.tgz.1 from /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7062586962/log.49271105._000049.job.log.tgz.1 to /var/lib/
[2026-04-01 04:40:13] 2026-04-01 02:39:37,286 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7062586962/log.49271105._000049.job.log.tgz.1 /var/lib/boinc/var/slot108/slots/1/
[2026-04-01 04:40:13] 2026-04-01 02:39:37,299 | INFO     | adding to output.list: log.49271105._000049.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/f5/log.49271105._000049.job.log.tg
[2026-04-01 04:40:13] 2026-04-01 02:39:37,299 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-01 04:40:13] 2026-04-01 02:39:37,299 | INFO     | summary of transferred files:
[2026-04-01 04:40:13] 2026-04-01 02:39:37,299 | INFO     |  -- lfn=log.49271105._000049.job.log.tgz.1, status_code=0, status=transferred
[2026-04-01 04:40:13] 2026-04-01 02:39:37,299 | INFO     | stage-out finished correctly
[2026-04-01 04:40:13] 2026-04-01 02:39:38,453 | INFO     | PID=277216 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-01 04:40:13] 2026-04-01 02:39:38,453 | INFO     | .. there are 14 such processes running
[2026-04-01 04:40:13] 2026-04-01 02:39:39,057 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-01 04:40:13] 2026-04-01 02:39:39,453 | INFO     | time since job start (3222s) is within the limit (345600.0s)
[2026-04-01 04:40:13] 2026-04-01 02:39:39,692 | INFO     | job 7062586962 has state=finished
[2026-04-01 04:40:13] 2026-04-01 02:39:39,692 | INFO     | preparing for final server update for job 7062586962 in state='finished'
[2026-04-01 04:40:13] 2026-04-01 02:39:39,693 | INFO     | reading metadata from: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7062586962/jobReport.json
[2026-04-01 04:40:13] 2026-04-01 02:39:39,694 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot108/slots/1/workernode_map.json
[2026-04-01 04:40:13] 2026-04-01 02:39:39,694 | INFO     | this job has now completed (state=finished)
[2026-04-01 04:40:13] 2026-04-01 02:39:39,694 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-01 04:40:13] 2026-04-01 02:39:39,694 | INFO     | log transfer has been attempted: DONE
[2026-04-01 04:40:13] 2026-04-01 02:39:39,694 | INFO     | job 7062586962 has finished - writing final server update
[2026-04-01 04:40:13] 2026-04-01 02:39:39,695 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3081345/.job.ad'
[2026-04-01 04:40:13] 2026-04-01 02:39:39,695 | INFO     | total number of processed events: 400 (read)
[2026-04-01 04:40:13] 2026-04-01 02:39:39,712 | INFO     | using path: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7062586962/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 04:40:13] 2026-04-01 02:39:39,712 | INFO     | extracted standard info from prmon json
[2026-04-01 04:40:13] 2026-04-01 02:39:39,713 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 04:40:13] 2026-04-01 02:39:39,713 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-01 04:40:13] 2026-04-01 02:39:39,713 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 04:40:13] 2026-04-01 02:39:39,713 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | fitting pss+swap vs Time
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | sum of square deviations: 30168007.5
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | sum of deviations: 5255576.999999963
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | mean x: 1775009655.5
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | mean y: 2735310.0434782607
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | intersect: -306489617.0659325
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | chi2: 0.0009874676895590586
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | current memory leak: 0.17 B/s (using 46 data points, chi2=0.00)
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | could have reported an average CPU frequency of 3660 MHz (5 samples)
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | ..............................
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | . Timing measurements:
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | . get job = 0 s
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | . initial setup = 4 s
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | . payload setup = 5 s
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | . stage-in = 0 s
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | . payload execution = 3199 s
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | . stage-out = 0 s
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | . log creation = 0 s
[2026-04-01 04:40:13] 2026-04-01 02:39:39,714 | INFO     | ..............................
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | 
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | job summary report
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | --------------------------------------------------
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | PanDA job id: 7062586962
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | task id: 49271105
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | errors: (none)
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | pilot state: finished 
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | transexitcode: 0
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | exeerrorcode: 0
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | exeerrordiag: 
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | exitcode: 0
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | exitmsg: OK
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | cpuconsumptiontime: 34657 s
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | nevents: 400
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | neventsw: 0
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | pid: 290287
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | pgrp: 290287
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | corecount: 12
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | event service: False
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | sizes: {0: 2280215, 11: 2280215, 3208: 2305732, 3209: 2314754, 3211: 2315036}
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | --------------------------------------------------
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | 
[2026-04-01 04:40:13] 2026-04-01 02:39:39,762 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot108/slots/1
[2026-04-01 04:40:13] 2026-04-01 02:39:39,781 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,781 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,781 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,781 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,781 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,781 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,781 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,781 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,781 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,781 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,781 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,781 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,781 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,781 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,781 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,781 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,782 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,782 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 04:40:13] 2026-04-01 02:39:39,782 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,782 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 04:40:13] 2026-04-01 02:39:39,782 | INFO     | job 7062586962 has completed (purged errors)
[2026-04-01 04:40:13] 2026-04-01 02:39:39,782 | INFO     | overall cleanup function is called
[2026-04-01 04:40:13] 2026-04-01 02:39:40,789 | INFO     | --- collectZombieJob: --- 10, [290287]
[2026-04-01 04:40:13] 2026-04-01 02:39:40,789 | INFO     | zombie collector waiting for pid 290287
[2026-04-01 04:40:13] 2026-04-01 02:39:40,790 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 04:40:13] 2026-04-01 02:39:40,790 | INFO     | collected zombie processes
[2026-04-01 04:40:13] 2026-04-01 02:39:40,790 | INFO     | will attempt to kill all subprocesses of pid=290287
[2026-04-01 04:40:13] 2026-04-01 02:39:41,133 | INFO     | process IDs to be killed: [290287] (in reverse order)
[2026-04-01 04:40:13] 2026-04-01 02:39:41,278 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 04:40:13] 2026-04-01 02:39:41,278 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 04:40:13] 2026-04-01 02:39:41,302 | INFO     | did not find any defunct processes belonging to 290287
[2026-04-01 04:40:13] 2026-04-01 02:39:41,324 | INFO     | did not find any defunct processes belonging to 290287
[2026-04-01 04:40:13] 2026-04-01 02:39:41,325 | INFO     | ready for new job
[2026-04-01 04:40:13] 2026-04-01 02:39:41,325 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-01 04:40:13] 2026-04-01 02:39:41,326 | INFO     | **************************************
[2026-04-01 04:40:13] 2026-04-01 02:39:41,326 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-01 04:40:13] 2026-04-01 02:39:41,326 | INFO     | **************************************
[2026-04-01 04:40:13] 2026-04-01 02:39:41,326 | INFO     | 
[2026-04-01 04:40:13] 2026-04-01 02:39:41,332 | INFO     | architecture information:
[2026-04-01 04:40:13] 2026-04-01 02:39:41,332 | INFO     | executing command: cat /etc/os-release
[2026-04-01 04:40:13] 2026-04-01 02:39:41,344 | INFO     | cat /etc/os-release:
[2026-04-01 04:40:13] NAME="CentOS Linux"
[2026-04-01 04:40:13] VERSION="7 (Core)"
[2026-04-01 04:40:13] ID="centos"
[2026-04-01 04:40:13] ID_LIKE="rhel fedora"
[2026-04-01 04:40:13] VERSION_ID="7"
[2026-04-01 04:40:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 04:40:13] ANSI_COLOR="0;31"
[2026-04-01 04:40:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 04:40:13] HOME_URL="https://www.centos.org/"
[2026-04-01 04:40:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 04:40:13] 
[2026-04-01 04:40:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 04:40:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 04:40:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 04:40:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 04:40:13] 
[2026-04-01 04:40:13] 2026-04-01 02:39:41,344 | INFO     | **************************************
[2026-04-01 04:40:13] 2026-04-01 02:39:41,847 | INFO     | executing command: df -mP /var/lib/boinc/var/slot108/slots/1
[2026-04-01 04:40:13] 2026-04-01 02:39:41,862 | INFO     | sufficient remaining disk space (264058699776 B)
[2026-04-01 04:40:13] 2026-04-01 02:39:41,862 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 04:40:13] 2026-04-01 02:39:41,862 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 04:40:13] 2026-04-01 02:39:41,862 | INFO     | update_server=False
[2026-04-01 04:40:13] 2026-04-01 02:39:41,862 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-01 04:40:13] 2026-04-01 02:39:41,865 | INFO     | all job control threads have been joined
[2026-04-01 04:40:13] 2026-04-01 02:39:42,167 | INFO     | all data control threads have been joined
[2026-04-01 04:40:13] 2026-04-01 02:39:42,780 | INFO     | all payload control threads have been joined
[2026-04-01 04:40:13] 2026-04-01 02:39:42,851 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 04:40:13] 2026-04-01 02:39:42,868 | INFO     | [job] retrieve thread has finished
[2026-04-01 04:40:13] 2026-04-01 02:39:42,871 | INFO     | [job] control thread has finished
[2026-04-01 04:40:13] 2026-04-01 02:39:43,045 | INFO     | [job] validate thread has finished
[2026-04-01 04:40:13] 2026-04-01 02:39:43,054 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 04:40:13] 2026-04-01 02:39:43,160 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 04:40:13] 2026-04-01 02:39:43,168 | INFO     | [data] control thread has finished
[2026-04-01 04:40:13] 2026-04-01 02:39:43,262 | INFO     | [payload] failed_post thread has finished
[2026-04-01 04:40:13] 2026-04-01 02:39:43,334 | INFO     | [data] copytool_in thread has finished
[2026-04-01 04:40:13] 2026-04-01 02:39:43,411 | WARNING  | process 290287 can no longer be monitored (due to stat problems) - aborting
[2026-04-01 04:40:13] 2026-04-01 02:39:43,533 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 04:40:13] 2026-04-01 02:39:43,666 | INFO     | using path: /var/lib/boinc/var/slot108/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 04:40:13] 2026-04-01 02:39:43,785 | INFO     | [payload] control thread has finished
[2026-04-01 04:40:13] 2026-04-01 02:39:43,968 | INFO     | [payload] validate_post thread has finished
[2026-04-01 04:40:13] 2026-04-01 02:39:44,007 | INFO     | number of running child processes to parent process 290287: 1
[2026-04-01 04:40:13] 2026-04-01 02:39:44,007 | INFO     | maximum number of monitored processes: 6
[2026-04-01 04:40:13] 2026-04-01 02:39:44,007 | INFO     | aborting job monitoring since job object (job id=7062586962) has expired
[2026-04-01 04:40:13] 2026-04-01 02:39:44,007 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 04:40:13] 2026-04-01 02:39:44,007 | INFO     | will abort loop
[2026-04-01 04:40:13] 2026-04-01 02:39:44,772 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 04:40:13] 2026-04-01 02:39:44,857 | INFO     | [data] copytool_out thread has finished
[2026-04-01 04:40:13] 2026-04-01 02:39:45,012 | INFO     | [job] job monitor thread has finished
[2026-04-01 04:40:13] 2026-04-01 02:39:45,110 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 04:40:13] 2026-04-01 02:39:45,777 | INFO     | [job] queue monitor thread has finished
[2026-04-01 04:40:13] 2026-04-01 02:39:49,116 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 04:40:13] 2026-04-01 02:39:52,164 | INFO     | job.realtimelogging is not enabled
[2026-04-01 04:40:13] 2026-04-01 02:39:53,169 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 04:40:13] 2026-04-01 02:40:01,737 | INFO     | [monitor] cgroup control has ended
[2026-04-01 04:40:13] 2026-04-01 02:40:03,730 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22837718841152)>', '<ExcThread(monitor, started 22837410649856)>']
[2026-04-01 04:40:13] 2026-04-01 02:40:08,755 | INFO     | all workflow threads have been joined
[2026-04-01 04:40:13] 2026-04-01 02:40:08,755 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 04:40:13] 2026-04-01 02:40:08,755 | INFO     | traces error code: 0
[2026-04-01 04:40:13] 2026-04-01 02:40:08,756 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 04:40:13] 2026-04-01 02:40:12,935 | INFO     | PID=277216 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-01 04:40:13] 2026-04-01 02:40:12,936 | INFO     | .. there are 14 such processes running
[2026-04-01 04:40:13] 2026-04-01 02:40:12,936 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 04:40:13] 2026-04-01 02:40:12,936 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 04:40:13] 2026-04-01 02:40:12,936 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 04:40:13] 2026-04-01 02:40:12,936 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 04:40:13] 2026-04-01 02:40:12,936 | INFO     | [monitor] control thread has ended
[2026-04-01 04:40:13] 2026-04-01 02:40:13,086 [wrapper] ==== pilot stdout END ====
[2026-04-01 04:40:13] 2026-04-01 02:40:13,089 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 04:40:13] 2026-04-01 02:40:13,091 [wrapper] pilotpid: 277216
[2026-04-01 04:40:13] 2026-04-01 02:40:13,093 [wrapper] Pilot exit status: 0
[2026-04-01 04:40:13] 2026-04-01 02:40:13,102 [wrapper] pandaids: 7062586962
[2026-04-01 04:40:13] 2026-04-01 02:40:13,200 [wrapper] cleanup supervisor_pilot  669843 277217
[2026-04-01 04:40:13] 2026-04-01 02:40:13,203 [wrapper] Test setup, not cleaning
[2026-04-01 04:40:13] 2026-04-01 02:40:13,205 [wrapper] apfmon messages muted
[2026-04-01 04:40:13] 2026-04-01 02:40:13,207 [wrapper] ==== wrapper stdout END ====
[2026-04-01 04:40:13] 2026-04-01 02:40:13,209 [wrapper] ==== wrapper stderr END ====
[2026-04-01 04:40:13]  *** Error codes and diagnostics ***
[2026-04-01 04:40:13]     "exeErrorCode": 0,
[2026-04-01 04:40:13]     "exeErrorDiag": "",
[2026-04-01 04:40:13]     "pilotErrorCode": 0,
[2026-04-01 04:40:13]     "pilotErrorDiag": "",
[2026-04-01 04:40:13]  *** Listing of results directory ***
[2026-04-01 04:40:13] total 489520
[2026-04-01 04:40:13] -rwx------. 1 boinc boinc     36322 Mar 23 02:27 runpilot2-wrapper.sh
[2026-04-01 04:40:13] -rw-r--r--. 1 boinc boinc    585013 Mar 23 02:27 pilot3.tar.gz
[2026-04-01 04:40:13] -rw-r--r--. 1 boinc boinc      5111 Mar 23 02:29 queuedata.json
[2026-04-01 04:40:13] -rw-r--r--. 1 boinc boinc       100 Apr  1 03:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 04:40:13] -rwxr-xr-x. 1 boinc boinc      7986 Apr  1 03:45 run_atlas
[2026-04-01 04:40:13] -rw-r--r--. 1 boinc boinc       105 Apr  1 03:45 job.xml
[2026-04-01 04:40:13] -rw-r--r--. 1 boinc boinc      6712 Apr  1 03:45 init_data.xml
[2026-04-01 04:40:13] -rw-r--r--. 2 boinc boinc 259544610 Apr  1 03:45 EVNT.49126606._000001.pool.root.1
[2026-04-01 04:40:13] -rw-r--r--. 2 boinc boinc     15845 Apr  1 03:45 start_atlas.sh
[2026-04-01 04:40:13] drwxrwx--x. 2 boinc boinc      4096 Apr  1 03:45 shared
[2026-04-01 04:40:13] -rw-r--r--. 2 boinc boinc    597529 Apr  1 03:45 input.tar.gz
[2026-04-01 04:40:13] -rw-r--r--. 1 boinc boinc         0 Apr  1 03:45 boinc_lockfile
[2026-04-01 04:40:13] -rw-r--r--. 1 boinc boinc      2579 Apr  1 03:45 pandaJob.out
[2026-04-01 04:40:13] -rw-------. 1 boinc boinc   1005014 Apr  1 03:45 agis_schedconf.cvmfs.json
[2026-04-01 04:40:13] -rw-------. 1 boinc boinc   1511579 Apr  1 03:45 agis_ddmendpoints.agis.ALL.json
[2026-04-01 04:40:13] -rw-------. 1 boinc boinc       444 Apr  1 03:45 workernode_map.json
[2026-04-01 04:40:13] drwx------. 5 boinc boinc      4096 Apr  1 03:45 pilot3
[2026-04-01 04:40:13] -rw-r--r--. 1 boinc boinc       530 Apr  1 04:39 boinc_task_state.xml
[2026-04-01 04:40:13] -rw-------. 1 boinc boinc 236039557 Apr  1 04:39 HITS.49271105._000049.pool.root.1
[2026-04-01 04:40:13] -rw-------. 1 boinc boinc      1029 Apr  1 04:39 memory_monitor_summary.json
[2026-04-01 04:40:13] -rw-------. 1 boinc boinc    378429 Apr  1 04:39 log.49271105._000049.job.log.tgz.1
[2026-04-01 04:40:13] -rw-------. 1 boinc boinc      6343 Apr  1 04:39 heartbeat.json
[2026-04-01 04:40:13] -rw-r--r--. 1 boinc boinc      8192 Apr  1 04:40 boinc_mmap_file
[2026-04-01 04:40:13] -rw-r--r--. 1 boinc boinc        27 Apr  1 04:40 wrapper_checkpoint.txt
[2026-04-01 04:40:13] -rw-------. 1 boinc boinc        95 Apr  1 04:40 pilot_heartbeat.json
[2026-04-01 04:40:13] -rw-------. 1 boinc boinc       822 Apr  1 04:40 pilotlog.txt
[2026-04-01 04:40:13] -rw-------. 1 boinc boinc    495756 Apr  1 04:40 log.49271105._000049.job.log.1
[2026-04-01 04:40:13] -rw-------. 1 boinc boinc       357 Apr  1 04:40 output.list
[2026-04-01 04:40:13] -rw-r--r--. 1 boinc boinc       620 Apr  1 04:40 runtime_log
[2026-04-01 04:40:13] -rw-------. 1 boinc boinc    890880 Apr  1 04:40 result.tar.gz
[2026-04-01 04:40:13] -rw-r--r--. 1 boinc boinc      9223 Apr  1 04:40 runtime_log.err
[2026-04-01 04:40:13] -rw-------. 1 boinc boinc       663 Apr  1 04:40 cTIMDmYFjO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmlM8LDm7QK3rn.diag
[2026-04-01 04:40:13] -rw-r--r--. 1 boinc boinc     21384 Apr  1 04:40 stderr.txt
[2026-04-01 04:40:13] HITS file was successfully produced:
[2026-04-01 04:40:13] -rw-------. 1 boinc boinc 236039557 Apr  1 04:39 shared/HITS.pool.root.1
[2026-04-01 04:40:13]  *** Contents of shared directory: ***
[2026-04-01 04:40:13] total 485452
[2026-04-01 04:40:13] -rw-r--r--. 2 boinc boinc 259544610 Apr  1 03:45 ATLAS.root_0
[2026-04-01 04:40:13] -rw-r--r--. 2 boinc boinc     15845 Apr  1 03:45 start_atlas.sh
[2026-04-01 04:40:13] -rw-r--r--. 2 boinc boinc    597529 Apr  1 03:45 input.tar.gz
[2026-04-01 04:40:13] -rw-------. 1 boinc boinc 236039557 Apr  1 04:39 HITS.pool.root.1
[2026-04-01 04:40:13] -rw-------. 1 boinc boinc    890880 Apr  1 04:40 result.tar.gz
04:40:14 (269939): run_atlas exited; CPU time 34761.579474
04:40:14 (269939): called boinc_finish(0)

</stderr_txt>
]]>

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