Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:50:09 (10640): wrapper (7.7.26015): starting
16:50:09 (10640): wrapper: running run_atlas (--nthreads 8)
[2026-03-31 16:50:09] Arguments: --nthreads 8
[2026-03-31 16:50:09] Threads: 8
[2026-03-31 16:50:09] Checking for CVMFS
[2026-03-31 16:50:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 16:50:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 16:50:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 16:50:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 16:50:13] 2.11.2.0 32411 152196 137740 157914 1 192 19716402 25165824 4688 130560 153 53826937 99.841 34936725 1151 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-31 16:50:13] CVMFS is ok
[2026-03-31 16:50:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 16:50:13] Checking for apptainer binary...
[2026-03-31 16:50:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 16:50:13] Running /usr/bin/apptainer --version
[2026-03-31 16:50:14] apptainer version 1.3.2-1.el7
[2026-03-31 16:50:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 16:50:30] cg-vwn431.simple-grid.lan
[2026-03-31 16:50:30] apptainer works
[2026-03-31 16:50:30] Set ATHENA_PROC_NUMBER=8
[2026-03-31 16:50:30] Set ATHENA_CORE_NUMBER=8
[2026-03-31 16:50:30] Starting ATLAS job with PandaID=7074778588
[2026-03-31 16:50:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 20:43:55]  *** The last 200 lines of the pilot log: ***
[2026-03-31 20:43:55] 2026-03-31 18:42:44,458 | INFO     | total number of processed events: 400 (read)
[2026-03-31 20:43:55] 2026-03-31 18:42:44,460 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-7074778588/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 20:43:55] 2026-03-31 18:42:44,460 | INFO     | extracted standard info from prmon json
[2026-03-31 20:43:55] 2026-03-31 18:42:44,460 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 20:43:55] 2026-03-31 18:42:44,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 20:43:55] 2026-03-31 18:42:44,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 20:43:55] 2026-03-31 18:42:44,465 | INFO     | fitting pss+swap vs Time
[2026-03-31 20:43:55] 2026-03-31 18:42:44,466 | INFO     | sum of square deviations: 3301699115.0
[2026-03-31 20:43:55] 2026-03-31 18:42:44,468 | INFO     | sum of deviations: 88213219990.49997
[2026-03-31 20:43:55] 2026-03-31 18:42:44,468 | INFO     | mean x (centered): 0.0
[2026-03-31 20:43:55] 2026-03-31 18:42:44,468 | INFO     | mean y: 2442430.6136363638
[2026-03-31 20:43:55] 2026-03-31 18:42:44,468 | INFO     | intersect: 2442430.6136363638
[2026-03-31 20:43:55] 2026-03-31 18:42:44,469 | INFO     | chi2: 8.174574303579977
[2026-03-31 20:43:55] 2026-03-31 18:42:44,469 | INFO     | sum of square deviations: 3081657780.0
[2026-03-31 20:43:55] 2026-03-31 18:42:44,471 | INFO     | sum of deviations: 100768550328.00002
[2026-03-31 20:43:55] 2026-03-31 18:42:44,471 | INFO     | mean x (centered): 0.0
[2026-03-31 20:43:55] 2026-03-31 18:42:44,471 | INFO     | mean y: 2450944.8186046514
[2026-03-31 20:43:55] 2026-03-31 18:42:44,471 | INFO     | intersect: 2450944.8186046514
[2026-03-31 20:43:55] 2026-03-31 18:42:44,472 | INFO     | chi2: 7.48545947869209
[2026-03-31 20:43:55] 2026-03-31 18:42:44,472 | INFO     | current chi2=7.48545947869209 (change=8.42997811624387 %)
[2026-03-31 20:43:55] 2026-03-31 18:42:44,472 | INFO     | right removable region: 214
[2026-03-31 20:43:55] 2026-03-31 18:42:44,473 | INFO     | sum of square deviations: 3081657780.0
[2026-03-31 20:43:55] 2026-03-31 18:42:44,474 | INFO     | sum of deviations: 11684854268.000004
[2026-03-31 20:43:55] 2026-03-31 18:42:44,475 | INFO     | mean x (centered): 0.0
[2026-03-31 20:43:55] 2026-03-31 18:42:44,475 | INFO     | mean y: 2495427.1581395348
[2026-03-31 20:43:55] 2026-03-31 18:42:44,475 | INFO     | intersect: 2495427.1581395348
[2026-03-31 20:43:55] 2026-03-31 18:42:44,475 | INFO     | chi2: 3.134852321864653
[2026-03-31 20:43:55] 2026-03-31 18:42:44,476 | INFO     | current chi2=3.134852321864653 (change=61.65118567101685 %)
[2026-03-31 20:43:55] 2026-03-31 18:42:44,476 | INFO     | sum of square deviations: 2871616632.5
[2026-03-31 20:43:55] 2026-03-31 18:42:44,478 | INFO     | sum of deviations: -37412419777.00001
[2026-03-31 20:43:55] 2026-03-31 18:42:44,478 | INFO     | mean x (centered): 0.0
[2026-03-31 20:43:55] 2026-03-31 18:42:44,478 | INFO     | mean y: 2530926.780952381
[2026-03-31 20:43:55] 2026-03-31 18:42:44,478 | INFO     | intersect: 2530926.780952381
[2026-03-31 20:43:55] 2026-03-31 18:42:44,479 | INFO     | chi2: 0.9947152158808295
[2026-03-31 20:43:55] 2026-03-31 18:42:44,479 | INFO     | current chi2=0.9947152158808295 (change=68.26915229967965 %)
[2026-03-31 20:43:55] 2026-03-31 18:42:44,479 | INFO     | sum of square deviations: 2671343110.0
[2026-03-31 20:43:55] 2026-03-31 18:42:44,481 | INFO     | sum of deviations: -41760400652.0
[2026-03-31 20:43:55] 2026-03-31 18:42:44,481 | INFO     | mean x (centered): 0.0
[2026-03-31 20:43:55] 2026-03-31 18:42:44,481 | INFO     | mean y: 2534179.156097561
[2026-03-31 20:43:55] 2026-03-31 18:42:44,481 | INFO     | intersect: 2534179.156097561
[2026-03-31 20:43:55] 2026-03-31 18:42:44,482 | INFO     | chi2: 0.9366748427893297
[2026-03-31 20:43:55] 2026-03-31 18:42:44,482 | INFO     | current chi2=0.9366748427893297 (change=5.834873355194884 %)
[2026-03-31 20:43:55] 2026-03-31 18:42:44,482 | INFO     | left removable region: 15
[2026-03-31 20:43:55] 2026-03-31 18:42:44,482 | INFO     | sum of square deviations: 2443580700.0
[2026-03-31 20:43:55] 2026-03-31 18:42:44,487 | INFO     | sum of deviations: -27034456288.0
[2026-03-31 20:43:55] 2026-03-31 18:42:44,487 | INFO     | mean x (centered): 0.0
[2026-03-31 20:43:55] 2026-03-31 18:42:44,487 | INFO     | mean y: 2545740.8090452263
[2026-03-31 20:43:55] 2026-03-31 18:42:44,487 | INFO     | intersect: 2545740.8090452263
[2026-03-31 20:43:55] 2026-03-31 18:42:44,488 | INFO     | chi2: 0.14409753792030056
[2026-03-31 20:43:55] 2026-03-31 18:42:44,488 | INFO     | current memory leak: -11.06 B/s (using 199 data points, chi2=0.14)
[2026-03-31 20:43:55] 2026-03-31 18:42:44,489 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-31 20:43:55] 2026-03-31 18:42:44,489 | INFO     | ..............................
[2026-03-31 20:43:55] 2026-03-31 18:42:44,489 | INFO     | . Timing measurements:
[2026-03-31 20:43:55] 2026-03-31 18:42:44,489 | INFO     | . get job = 0 s
[2026-03-31 20:43:55] 2026-03-31 18:42:44,489 | INFO     | . initial setup = 100 s
[2026-03-31 20:43:55] 2026-03-31 18:42:44,489 | INFO     | . payload setup = 142 s
[2026-03-31 20:43:55] 2026-03-31 18:42:44,489 | INFO     | . stage-in = 0 s
[2026-03-31 20:43:55] 2026-03-31 18:42:44,490 | INFO     | . payload execution = 13483 s
[2026-03-31 20:43:55] 2026-03-31 18:42:44,490 | INFO     | . stage-out = 5 s
[2026-03-31 20:43:55] 2026-03-31 18:42:44,490 | INFO     | . log creation = 1 s
[2026-03-31 20:43:55] 2026-03-31 18:42:44,490 | INFO     | ..............................
[2026-03-31 20:43:55] 2026-03-31 18:42:44,625 | INFO     | 
[2026-03-31 20:43:55] 2026-03-31 18:42:44,625 | INFO     | job summary report
[2026-03-31 20:43:55] 2026-03-31 18:42:44,625 | INFO     | --------------------------------------------------
[2026-03-31 20:43:55] 2026-03-31 18:42:44,625 | INFO     | PanDA job id: 7074778588
[2026-03-31 20:43:55] 2026-03-31 18:42:44,625 | INFO     | task id: 49499835
[2026-03-31 20:43:55] 2026-03-31 18:42:44,625 | INFO     | errors: (none)
[2026-03-31 20:43:55] 2026-03-31 18:42:44,625 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 20:43:55] 2026-03-31 18:42:44,626 | INFO     | pilot state: finished 
[2026-03-31 20:43:55] 2026-03-31 18:42:44,626 | INFO     | transexitcode: 0
[2026-03-31 20:43:55] 2026-03-31 18:42:44,626 | INFO     | exeerrorcode: 0
[2026-03-31 20:43:55] 2026-03-31 18:42:44,626 | INFO     | exeerrordiag: 
[2026-03-31 20:43:55] 2026-03-31 18:42:44,626 | INFO     | exitcode: 0
[2026-03-31 20:43:55] 2026-03-31 18:42:44,626 | INFO     | exitmsg: OK
[2026-03-31 20:43:55] 2026-03-31 18:42:44,626 | INFO     | cpuconsumptiontime: 51268 s
[2026-03-31 20:43:55] 2026-03-31 18:42:44,626 | INFO     | nevents: 400
[2026-03-31 20:43:55] 2026-03-31 18:42:44,626 | INFO     | neventsw: 0
[2026-03-31 20:43:55] 2026-03-31 18:42:44,626 | INFO     | pid: 19284
[2026-03-31 20:43:55] 2026-03-31 18:42:44,626 | INFO     | pgrp: 19284
[2026-03-31 20:43:55] 2026-03-31 18:42:44,627 | INFO     | corecount: 8
[2026-03-31 20:43:55] 2026-03-31 18:42:44,627 | INFO     | event service: False
[2026-03-31 20:43:55] 2026-03-31 18:42:44,627 | INFO     | sizes: {0: 2279115, 1: 2279801, 2: 2281630, 13630: 2311857, 13636: 2320857, 13640: 2320913, 13641: 2321235}
[2026-03-31 20:43:55] 2026-03-31 18:42:44,627 | INFO     | --------------------------------------------------
[2026-03-31 20:43:55] 2026-03-31 18:42:44,627 | INFO     | 
[2026-03-31 20:43:55] 2026-03-31 18:42:44,627 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-03-31 20:43:55] 2026-03-31 18:42:45,048 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,049 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,049 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,049 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,049 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,049 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,049 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,049 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,049 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,049 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,050 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,050 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,050 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,050 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,050 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,050 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,050 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,050 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 20:43:55] 2026-03-31 18:42:45,050 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,050 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 20:43:55] 2026-03-31 18:42:45,051 | INFO     | job 7074778588 has completed (purged errors)
[2026-03-31 20:43:55] 2026-03-31 18:42:45,051 | INFO     | overall cleanup function is called
[2026-03-31 20:43:55] 2026-03-31 18:42:45,909 | INFO     | PID=14748 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-31 20:43:55] 2026-03-31 18:42:45,909 | INFO     | .. there are 9 such processes running
[2026-03-31 20:43:55] 2026-03-31 18:42:46,060 | INFO     | --- collectZombieJob: --- 10, [19284]
[2026-03-31 20:43:55] 2026-03-31 18:42:46,060 | INFO     | zombie collector waiting for pid 19284
[2026-03-31 20:43:55] 2026-03-31 18:42:46,060 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 20:43:55] 2026-03-31 18:42:46,060 | INFO     | collected zombie processes
[2026-03-31 20:43:55] 2026-03-31 18:42:46,060 | INFO     | will attempt to kill all subprocesses of pid=19284
[2026-03-31 20:43:55] 2026-03-31 18:42:46,183 | INFO     | process IDs to be killed: [19284] (in reverse order)
[2026-03-31 20:43:55] 2026-03-31 18:42:46,956 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 20:43:55] 2026-03-31 18:42:46,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 20:43:55] 2026-03-31 18:42:46,960 | INFO     | did not find any defunct processes belonging to 19284
[2026-03-31 20:43:55] 2026-03-31 18:42:46,963 | INFO     | did not find any defunct processes belonging to 19284
[2026-03-31 20:43:55] 2026-03-31 18:42:46,963 | INFO     | Ready for new job
[2026-03-31 20:43:55] 2026-03-31 18:42:46,965 | INFO     | **************************************
[2026-03-31 20:43:55] 2026-03-31 18:42:46,965 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 20:43:55] 2026-03-31 18:42:46,966 | INFO     | **************************************
[2026-03-31 20:43:55] 2026-03-31 18:42:46,966 | INFO     | 
[2026-03-31 20:43:55] 2026-03-31 18:42:46,966 | INFO     | pilot is running in a VM
[2026-03-31 20:43:55] 2026-03-31 18:42:46,966 | INFO     | architecture information:
[2026-03-31 20:43:55] 2026-03-31 18:42:46,970 | INFO     | executing command: cat /etc/os-release
[2026-03-31 20:43:55] 2026-03-31 18:42:47,228 | INFO     | cat /etc/os-release:
[2026-03-31 20:43:55] NAME="CentOS Linux"
[2026-03-31 20:43:55] VERSION="7 (Core)"
[2026-03-31 20:43:55] ID="centos"
[2026-03-31 20:43:55] ID_LIKE="rhel fedora"
[2026-03-31 20:43:55] VERSION_ID="7"
[2026-03-31 20:43:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 20:43:55] ANSI_COLOR="0;31"
[2026-03-31 20:43:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 20:43:55] HOME_URL="https://www.centos.org/"
[2026-03-31 20:43:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 20:43:55] 
[2026-03-31 20:43:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 20:43:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 20:43:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 20:43:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 20:43:55] 
[2026-03-31 20:43:55] 2026-03-31 18:42:47,228 | INFO     | **************************************
[2026-03-31 20:43:55] 2026-03-31 18:42:47,732 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-03-31 20:43:55] 2026-03-31 18:42:47,981 | INFO     | sufficient remaining disk space (496604545024 B)
[2026-03-31 20:43:55] 2026-03-31 18:42:47,981 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 20:43:55] 2026-03-31 18:42:47,981 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 20:43:55] 2026-03-31 18:42:47,981 | INFO     | update_server=False
[2026-03-31 20:43:55] 2026-03-31 18:42:47,981 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 20:43:55] 2026-03-31 18:42:48,106 | INFO     | all job control threads have been joined
[2026-03-31 20:43:55] 2026-03-31 18:42:48,244 | INFO     | all data control threads have been joined
[2026-03-31 20:43:55] 2026-03-31 18:42:48,330 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-31 20:43:55] 2026-03-31 18:42:48,330 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-31 20:43:55] 2026-03-31 18:42:48,330 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 20:43:55] 2026-03-31 18:42:48,330 | INFO     | will abort loop
[2026-03-31 20:43:55] 2026-03-31 18:42:48,609 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 20:43:55] 2026-03-31 18:42:48,987 | INFO     | [job] retrieve thread has finished
[2026-03-31 20:43:55] 2026-03-31 18:42:49,075 | INFO     | all payload control threads have been joined
[2026-03-31 20:43:55] 2026-03-31 18:42:49,088 | INFO     | [data] copytool_in thread has finished
[2026-03-31 20:43:55] 2026-03-31 18:42:49,112 | INFO     | [job] control thread has finished
[2026-03-31 20:43:55] 2026-03-31 18:42:49,250 | INFO     | [data] control thread has finished
[2026-03-31 20:43:55] 2026-03-31 18:42:49,287 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 20:43:55] 2026-03-31 18:42:49,335 | INFO     | [job] job monitor thread has finished
[2026-03-31 20:43:55] 2026-03-31 18:42:49,341 | INFO     | [payload] validate_post thread has finished
[2026-03-31 20:43:55] 2026-03-31 18:42:49,585 | INFO     | [job] validate thread has finished
[2026-03-31 20:43:55] 2026-03-31 18:42:49,640 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 20:43:55] 2026-03-31 18:42:49,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 20:43:55] 2026-03-31 18:42:49,796 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 20:43:55] 2026-03-31 18:42:49,943 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 20:43:55] 2026-03-31 18:42:50,078 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 20:43:55] 2026-03-31 18:42:50,081 | INFO     | [payload] control thread has finished
[2026-03-31 20:43:55] 2026-03-31 18:42:50,392 | INFO     | [payload] failed_post thread has finished
[2026-03-31 20:43:55] 2026-03-31 18:42:50,616 | INFO     | [data] copytool_out thread has finished
[2026-03-31 20:43:55] 2026-03-31 18:42:50,646 | INFO     | [job] queue monitor thread has finished
[2026-03-31 20:43:55] 2026-03-31 18:42:53,701 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 20:43:55] 2026-03-31 18:43:18,176 | INFO     | PID=14748 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-31 20:43:55] 2026-03-31 18:43:18,177 | INFO     | .. there are 9 such processes running
[2026-03-31 20:43:55] 2026-03-31 18:43:18,178 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 20:43:55] 2026-03-31 18:43:18,178 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 20:43:55] 2026-03-31 18:43:18,178 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 20:43:55] 2026-03-31 18:43:45,482 | INFO     | [monitor] cgroup control has ended
[2026-03-31 20:43:55] 2026-03-31 18:43:46,538 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139737656444736)>', '<ExcThread(monitor, started 139737062946560)>']
[2026-03-31 20:43:55] 2026-03-31 18:43:47,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 20:43:55] 2026-03-31 18:43:47,352 | INFO     | [monitor] control thread has ended
[2026-03-31 20:43:55] 2026-03-31 18:43:51,564 | INFO     | all workflow threads have been joined
[2026-03-31 20:43:55] 2026-03-31 18:43:51,564 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 20:43:55] 2026-03-31 18:43:51,564 | INFO     | traces error code: 0
[2026-03-31 20:43:55] 2026-03-31 18:43:51,564 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 20:43:55] 2026-03-31 18:43:51,994 [wrapper] ==== pilot stdout END ====
[2026-03-31 20:43:55] 2026-03-31 18:43:52,079 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 20:43:55] 2026-03-31 18:43:52,171 [wrapper] pilotpid: 14748
[2026-03-31 20:43:55] 2026-03-31 18:43:52,293 [wrapper] Pilot exit status: 0
[2026-03-31 20:43:55] 2026-03-31 18:43:52,672 [wrapper] pandaids: 7074778588
[2026-03-31 20:43:55] 2026-03-31 18:43:53,496 [wrapper] cleanup supervisor_pilot 27329 14749
[2026-03-31 20:43:55] 2026-03-31 18:43:53,574 [wrapper] Test setup, not cleaning
[2026-03-31 20:43:55] 2026-03-31 18:43:53,618 [wrapper] apfmon messages muted
[2026-03-31 20:43:55] 2026-03-31 18:43:53,687 [wrapper] ==== wrapper stdout END ====
[2026-03-31 20:43:55] 2026-03-31 18:43:53,767 [wrapper] ==== wrapper stderr END ====
[2026-03-31 20:43:55]  *** Error codes and diagnostics ***
[2026-03-31 20:43:55]     "exeErrorCode": 0,
[2026-03-31 20:43:55]     "pilotErrorCode": 0,
[2026-03-31 20:43:55]  *** Listing of results directory ***
[2026-03-31 20:43:55] total 458884
[2026-03-31 20:43:55] -rw-r--r--. 1 boinc boinc      5118 Mar 31 05:30 queuedata.json
[2026-03-31 20:43:55] -rw-r--r--. 1 boinc boinc    644034 Mar 31 05:30 pilot3.tar.gz
[2026-03-31 20:43:55] -rwx------. 1 boinc boinc     36322 Mar 31 05:31 runpilot2-wrapper.sh
[2026-03-31 20:43:55] -rw-r--r--. 1 boinc boinc       100 Mar 31 16:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 20:43:55] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 16:50 run_atlas
[2026-03-31 20:43:55] -rw-r--r--. 1 boinc boinc       105 Mar 31 16:50 job.xml
[2026-03-31 20:43:55] -rw-r--r--. 2 boinc boinc 292858840 Mar 31 16:50 EVNT.49475052._000001.pool.root.1
[2026-03-31 20:43:55] -rw-r--r--. 1 boinc boinc      6393 Mar 31 16:50 init_data.xml
[2026-03-31 20:43:55] -rw-r--r--. 2 boinc boinc     15845 Mar 31 16:50 start_atlas.sh
[2026-03-31 20:43:55] drwxrwx--x. 2 boinc boinc        68 Mar 31 16:50 shared
[2026-03-31 20:43:55] -rw-r--r--. 2 boinc boinc    656739 Mar 31 16:50 input.tar.gz
[2026-03-31 20:43:55] -rw-r--r--. 1 boinc boinc         0 Mar 31 16:50 boinc_lockfile
[2026-03-31 20:43:55] -rw-r--r--. 1 boinc boinc      2568 Mar 31 16:50 pandaJob.out
[2026-03-31 20:43:55] -rw-------. 1 boinc boinc       415 Mar 31 16:55 workernode_map.json
[2026-03-31 20:43:55] -rw-------. 1 boinc boinc   1003225 Mar 31 16:55 agis_schedconf.cvmfs.json
[2026-03-31 20:43:55] drwx------. 5 boinc boinc      4096 Mar 31 16:55 pilot3
[2026-03-31 20:43:55] -rw-------. 1 boinc boinc 169710668 Mar 31 20:41 HITS.49499835._000011.pool.root.1
[2026-03-31 20:43:55] -rw-r--r--. 1 boinc boinc       531 Mar 31 20:41 boinc_task_state.xml
[2026-03-31 20:43:55] -rw-------. 1 boinc boinc      1011 Mar 31 20:42 memory_monitor_summary.json
[2026-03-31 20:43:55] -rw-------. 1 boinc boinc   1511579 Mar 31 20:42 agis_ddmendpoints.agis.ALL.json
[2026-03-31 20:43:55] -rw-------. 1 boinc boinc    383756 Mar 31 20:42 log.49499835._000011.job.log.tgz.1
[2026-03-31 20:43:55] -rw-------. 1 boinc boinc      6324 Mar 31 20:42 heartbeat_new.json
[2026-03-31 20:43:55] -rw-------. 1 boinc boinc      6215 Mar 31 20:42 heartbeat.json
[2026-03-31 20:43:55] -rw-------. 1 boinc boinc        95 Mar 31 20:43 pilot_heartbeat.json
[2026-03-31 20:43:55] -rw-r--r--. 1 boinc boinc      8192 Mar 31 20:43 boinc_mmap_file
[2026-03-31 20:43:55] -rw-r--r--. 1 boinc boinc        28 Mar 31 20:43 wrapper_checkpoint.txt
[2026-03-31 20:43:55] -rw-------. 1 boinc boinc      5066 Mar 31 20:43 pilotlog.txt
[2026-03-31 20:43:55] -rw-------. 1 boinc boinc   1254617 Mar 31 20:43 log.49499835._000011.job.log.1
[2026-03-31 20:43:55] -rw-------. 1 boinc boinc       357 Mar 31 20:43 output.list
[2026-03-31 20:43:55] -rw-r--r--. 1 boinc boinc       620 Mar 31 20:43 runtime_log
[2026-03-31 20:43:55] -rw-------. 1 boinc boinc   1658880 Mar 31 20:43 result.tar.gz
[2026-03-31 20:43:55] -rw-r--r--. 1 boinc boinc      8832 Mar 31 20:43 runtime_log.err
[2026-03-31 20:43:55] -rw-------. 1 boinc boinc       655 Mar 31 20:43 BYTMDmM0eR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmRsPKDm7Uv6qn.diag
[2026-03-31 20:43:55] -rw-r--r--. 1 boinc boinc     20670 Mar 31 20:43 stderr.txt
[2026-03-31 20:43:55] HITS file was successfully produced:
[2026-03-31 20:43:55] -rw-------. 1 boinc boinc 169710668 Mar 31 20:41 shared/HITS.pool.root.1
[2026-03-31 20:43:55]  *** Contents of shared directory: ***
[2026-03-31 20:43:55] total 454012
[2026-03-31 20:43:55] -rw-r--r--. 2 boinc boinc 292858840 Mar 31 16:50 ATLAS.root_0
[2026-03-31 20:43:55] -rw-r--r--. 2 boinc boinc     15845 Mar 31 16:50 start_atlas.sh
[2026-03-31 20:43:55] -rw-r--r--. 2 boinc boinc    656739 Mar 31 16:50 input.tar.gz
[2026-03-31 20:43:55] -rw-------. 1 boinc boinc 169710668 Mar 31 20:41 HITS.pool.root.1
[2026-03-31 20:43:55] -rw-------. 1 boinc boinc   1658880 Mar 31 20:43 result.tar.gz
20:43:57 (10640): run_atlas exited; CPU time 51464.872359
20:43:57 (10640): called boinc_finish(0)

</stderr_txt>
]]>

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