Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:45:12 (216077): wrapper (7.7.26015): starting
10:45:12 (216077): wrapper: running run_atlas (--nthreads 4)
[2026-03-31 10:45:12] Arguments: --nthreads 4
[2026-03-31 10:45:12] Threads: 4
[2026-03-31 10:45:12] Checking for CVMFS
[2026-03-31 10:45:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 10:45:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 10:45:13] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 10:45:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 10:45:13] 2.9.2.0 6139 1138 86712 157913 3 50 18671824 36864000 0 130560 0 809977 99.980 44910 6173 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-31 10:45:13] CVMFS is ok
[2026-03-31 10:45:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 10:45:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 10:45:13] Further information can be found at the LHC@home message board.
[2026-03-31 10:45:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 10:45:13] Checking for apptainer binary...
[2026-03-31 10:45:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 10:45:13] Running /usr/bin/apptainer --version
[2026-03-31 10:45:13] apptainer version 1.4.1-1.1
[2026-03-31 10:45:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 10:45:13] thA373a
[2026-03-31 10:45:13] apptainer works
[2026-03-31 10:45:13] Set ATHENA_PROC_NUMBER=4
[2026-03-31 10:45:13] Set ATHENA_CORE_NUMBER=4
[2026-03-31 10:45:13] Starting ATLAS job with PandaID=7074759224
[2026-03-31 10:45:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 10:49:31]  *** The last 200 lines of the pilot log: ***
[2026-03-31 10:49:31] 
[2026-03-31 10:49:31] 2026-03-31 08:48:37,912 | INFO     | **************************************
[2026-03-31 10:49:31] 2026-03-31 08:48:38,415 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-31 10:49:31] 2026-03-31 08:48:38,433 | INFO     | sufficient remaining disk space (342511058944 B)
[2026-03-31 10:49:31] 2026-03-31 08:48:38,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 10:49:31] 2026-03-31 08:48:38,434 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 10:49:31] 2026-03-31 08:48:38,434 | INFO     | update_server=False
[2026-03-31 10:49:31] 2026-03-31 08:48:38,434 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 10:49:31] 2026-03-31 08:48:38,434 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 10:49:31] 2026-03-31 08:48:38,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 10:49:31] 2026-03-31 08:48:38,501 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 10:49:31] 2026-03-31 08:48:38,511 | INFO     | all job control threads have been joined
[2026-03-31 10:49:31] 2026-03-31 08:48:38,754 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-31 10:49:31] 2026-03-31 08:48:38,754 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-31 10:49:31] 2026-03-31 08:48:38,754 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 10:49:31] 2026-03-31 08:48:38,754 | INFO     | will abort loop
[2026-03-31 10:49:31] 2026-03-31 08:48:38,816 | INFO     | all data control threads have been joined
[2026-03-31 10:49:31] 2026-03-31 08:48:39,439 | INFO     | [job] retrieve thread has finished
[2026-03-31 10:49:31] 2026-03-31 08:48:39,439 | INFO     | [job] queue monitor thread has finished
[2026-03-31 10:49:31] 2026-03-31 08:48:39,505 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 10:49:31] 2026-03-31 08:48:39,516 | INFO     | [job] control thread has finished
[2026-03-31 10:49:31] 2026-03-31 08:48:39,638 | INFO     | [data] copytool_in thread has finished
[2026-03-31 10:49:31] 2026-03-31 08:48:39,708 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 10:49:31] 2026-03-31 08:48:39,760 | INFO     | [job] job monitor thread has finished
[2026-03-31 10:49:31] 2026-03-31 08:48:39,822 | INFO     | [data] control thread has finished
[2026-03-31 10:49:31] 2026-03-31 08:48:39,883 | INFO     | [payload] failed_post thread has finished
[2026-03-31 10:49:31] 2026-03-31 08:48:39,884 | INFO     | all payload control threads have been joined
[2026-03-31 10:49:31] 2026-03-31 08:48:40,176 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 10:49:31] 2026-03-31 08:48:40,339 | INFO     | [payload] validate_post thread has finished
[2026-03-31 10:49:31] 2026-03-31 08:48:40,440 | INFO     | [data] copytool_out thread has finished
[2026-03-31 10:49:31] 2026-03-31 08:48:40,831 | INFO     | [job] validate thread has finished
[2026-03-31 10:49:31] 2026-03-31 08:48:40,890 | INFO     | [payload] control thread has finished
[2026-03-31 10:49:31] 2026-03-31 08:48:40,924 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 10:49:31] 2026-03-31 08:48:42,508 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 10:49:31] 2026-03-31 08:49:08,466 | INFO     | PID=220188 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-31 10:49:31] 2026-03-31 08:49:08,466 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 10:49:31] 2026-03-31 08:49:08,466 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 10:49:31] 2026-03-31 08:49:08,466 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 10:49:31] 2026-03-31 08:49:25,513 | INFO     | [monitor] cgroup control has ended
[2026-03-31 10:49:31] 2026-03-31 08:49:26,580 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140303552268096)>', '<ExcThread(monitor, started 140302597736192)>']
[2026-03-31 10:49:31] 2026-03-31 08:49:27,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 10:49:31] 2026-03-31 08:49:27,564 | INFO     | [monitor] control thread has ended
[2026-03-31 10:49:31] 2026-03-31 08:49:31,606 | INFO     | all workflow threads have been joined
[2026-03-31 10:49:31] 2026-03-31 08:49:31,606 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 10:49:31] 2026-03-31 08:49:31,606 | INFO     | traces error code: 0
[2026-03-31 10:49:31] 2026-03-31 08:49:31,607 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 10:49:31] 2026-03-31 08:49:31,685 [wrapper] ==== pilot stdout END ====
[2026-03-31 10:49:31] 2026-03-31 08:49:31,689 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 10:49:31] 2026-03-31 08:49:31,693 [wrapper] pilotpid: 220188
[2026-03-31 10:49:31] 2026-03-31 08:49:31,696 [wrapper] Pilot exit status: 0
[2026-03-31 10:49:31] 2026-03-31 08:49:31,708 [wrapper] pandaids: 7074759224
[2026-03-31 10:49:31] 2026-03-31 08:49:31,731 [wrapper] cleanup supervisor_pilot  220194 220189
[2026-03-31 10:49:31] 2026-03-31 08:49:31,735 [wrapper] Test setup, not cleaning
[2026-03-31 10:49:31] 2026-03-31 08:49:31,739 [wrapper] apfmon messages muted
[2026-03-31 10:49:31] 2026-03-31 08:49:31,743 [wrapper] ==== wrapper stdout END ====
[2026-03-31 10:49:31] 2026-03-31 08:49:31,746 [wrapper] ==== wrapper stderr END ====
[2026-03-31 10:49:31]  *** Error codes and diagnostics ***
[2026-03-31 10:49:31]     "exeErrorCode": 65,
[2026-03-31 10:49:31]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
[2026-03-31 10:49:31]     "pilotErrorCode": 1305,
[2026-03-31 10:49:31]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
[2026-03-31 10:49:31]  *** Listing of results directory ***
[2026-03-31 10:49:31] total 259008
[2026-03-31 10:49:31] -rw-r--r-- 1 boinc boinc      5118 Mar 31 05:30 queuedata.json
[2026-03-31 10:49:31] -rw-r--r-- 1 boinc boinc    644034 Mar 31 05:30 pilot3.tar.gz
[2026-03-31 10:49:31] -rwx------ 1 boinc boinc     36322 Mar 31 05:31 runpilot2-wrapper.sh
[2026-03-31 10:49:31] -rw-r--r-- 1 boinc boinc       100 Mar 31 10:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 10:49:31] -rwxr-xr-x 1 boinc boinc      7986 Mar 31 10:45 run_atlas
[2026-03-31 10:49:31] -rw-r--r-- 1 boinc boinc       105 Mar 31 10:45 job.xml
[2026-03-31 10:49:31] -rw-r--r-- 2 boinc boinc 260951062 Mar 31 10:45 EVNT.49474218._000008.pool.root.1
[2026-03-31 10:49:31] -rw-r--r-- 2 boinc boinc    656747 Mar 31 10:45 input.tar.gz
[2026-03-31 10:49:31] -rw-r--r-- 2 boinc boinc     15845 Mar 31 10:45 start_atlas.sh
[2026-03-31 10:49:31] drwxrwx--x 2 boinc boinc      4096 Mar 31 10:45 shared
[2026-03-31 10:49:31] -rw-r--r-- 1 boinc boinc         0 Mar 31 10:45 boinc_setup_complete
[2026-03-31 10:49:31] -rw-r--r-- 1 boinc boinc      6377 Mar 31 10:45 init_data.xml
[2026-03-31 10:49:31] -rw-r--r-- 1 boinc boinc         0 Mar 31 10:45 boinc_lockfile
[2026-03-31 10:49:31] -rw-r--r-- 1 boinc boinc      2601 Mar 31 10:45 pandaJob.out
[2026-03-31 10:49:31] -rw------- 1 boinc boinc   1003225 Mar 31 10:45 agis_schedconf.cvmfs.json
[2026-03-31 10:49:31] -rw------- 1 boinc boinc   1511579 Mar 31 10:45 agis_ddmendpoints.agis.ALL.json
[2026-03-31 10:49:31] -rw------- 1 boinc boinc       427 Mar 31 10:45 workernode_map.json
[2026-03-31 10:49:31] drwx------ 5 boinc boinc      4096 Mar 31 10:45 pilot3
[2026-03-31 10:49:31] -rw-r--r-- 1 boinc boinc       523 Mar 31 10:46 boinc_task_state.xml
[2026-03-31 10:49:31] -rw------- 1 boinc boinc       964 Mar 31 10:46 memory_monitor_summary.json
[2026-03-31 10:49:31] -rw------- 1 boinc boinc     33709 Mar 31 10:46 log.49499447._000179.job.log.tgz.1
[2026-03-31 10:49:31] -rw------- 1 boinc boinc        95 Mar 31 10:48 pilot_heartbeat.json
[2026-03-31 10:49:31] -rw------- 1 boinc boinc      7057 Mar 31 10:48 heartbeat_new.json
[2026-03-31 10:49:31] -rw------- 1 boinc boinc      7019 Mar 31 10:48 heartbeat.json
[2026-03-31 10:49:31] -rw-r--r-- 1 boinc boinc      8192 Mar 31 10:49 boinc_mmap_file
[2026-03-31 10:49:31] -rw-r--r-- 1 boinc boinc        23 Mar 31 10:49 wrapper_checkpoint.txt
[2026-03-31 10:49:31] -rw------- 1 boinc boinc      4932 Mar 31 10:49 pilotlog.txt
[2026-03-31 10:49:31] -rw------- 1 boinc boinc     76434 Mar 31 10:49 log.49499447._000179.job.log.1
[2026-03-31 10:49:31] -rw------- 1 boinc boinc       188 Mar 31 10:49 output.list
[2026-03-31 10:49:31] -rw-r--r-- 1 boinc boinc       620 Mar 31 10:49 runtime_log
[2026-03-31 10:49:31] -rw------- 1 boinc boinc    133120 Mar 31 10:49 result.tar.gz
[2026-03-31 10:49:31] -rw-r--r-- 1 boinc boinc      8748 Mar 31 10:49 runtime_log.err
[2026-03-31 10:49:31] -rw------- 1 boinc boinc       648 Mar 31 10:49 lXhMDmrzeR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmrmRKDmv51gLm.diag
[2026-03-31 10:49:31] -rw-r--r-- 1 boinc boinc      8427 Mar 31 10:49 stderr.txt
[2026-03-31 10:49:31] No HITS result produced
[2026-03-31 10:49:31]  *** Contents of shared directory: ***
[2026-03-31 10:49:31] total 255632
[2026-03-31 10:49:31] -rw-r--r-- 2 boinc boinc 260951062 Mar 31 10:45 ATLAS.root_0
[2026-03-31 10:49:31] -rw-r--r-- 2 boinc boinc    656747 Mar 31 10:45 input.tar.gz
[2026-03-31 10:49:31] -rw-r--r-- 2 boinc boinc     15845 Mar 31 10:45 start_atlas.sh
[2026-03-31 10:49:31] -rw------- 1 boinc boinc    133120 Mar 31 10:49 result.tar.gz
10:49:33 (216077): run_atlas exited; CPU time 32.981001
10:49:33 (216077): called boinc_finish(0)

</stderr_txt>
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