Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:37:41 (512655): wrapper (7.7.26015): starting
00:37:41 (512655): wrapper: running run_atlas (--nthreads 12)
[2026-04-01 00:37:41] Arguments: --nthreads 12
[2026-04-01 00:37:41] Threads: 12
[2026-04-01 00:37:41] Checking for CVMFS
[2026-04-01 00:37:41] No cvmfs_config command found, will try listing directly
[2026-04-01 00:37:41] CVMFS is ok
[2026-04-01 00:37:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-01 00:37:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-01 00:37:41] Further information can be found at the LHC@home message board.
[2026-04-01 00:37:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 00:37:41] Checking for apptainer binary...
[2026-04-01 00:37:41] which: no apptainer in ((null))
[2026-04-01 00:37:41] apptainer is not installed, using version from CVMFS
[2026-04-01 00:37:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 00:37:41] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-04-01 00:37:41] apptainer works
[2026-04-01 00:37:41] Set ATHENA_PROC_NUMBER=12
[2026-04-01 00:37:41] Set ATHENA_CORE_NUMBER=12
[2026-04-01 00:37:41] Starting ATLAS job with PandaID=7072603525
[2026-04-01 00:37:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 01:05:59]  *** The last 200 lines of the pilot log: ***
[2026-04-01 01:05:59]  domain=
[2026-04-01 01:05:59]  filesize=348283
[2026-04-01 01:05:59]  filetype=log
[2026-04-01 01:05:59]  guid=c760da7f-b03d-4829-bb7b-7d279df3a279
[2026-04-01 01:05:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-01 01:05:59]  is_altstaged=None
[2026-04-01 01:05:59]  is_tar=False
[2026-04-01 01:05:59]  lfn=log.49263191._009950.job.log.tgz.1
[2026-04-01 01:05:59]  mtime=0
[2026-04-01 01:05:59]  protocol_id=None
[2026-04-01 01:05:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-01 01:05:59]  replicas=None
[2026-04-01 01:05:59]  scope=mc23_13p6TeV
[2026-04-01 01:05:59]  status=None
[2026-04-01 01:05:59]  status_code=0
[2026-04-01 01:05:59]  storage_token=
[2026-04-01 01:05:59]  surl=/var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7072603525/log.49263191._009950.job.log.tgz.1
[2026-04-01 01:05:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/60/log.49263191._009950.job.log.tgz.1
[2026-04-01 01:05:59]  workdir=None
[2026-04-01 01:05:59] ]
[2026-04-01 01:05:59] 2026-03-31 23:04:47,666 | INFO     | transferring file log.49263191._009950.job.log.tgz.1 from /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7072603525/log.49263191._009950.job.log.tgz.1 to /var/lib/
[2026-04-01 01:05:59] 2026-03-31 23:04:47,666 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7072603525/log.49263191._009950.job.log.tgz.1 /var/lib/boinc/var/slot216/slots/1/
[2026-04-01 01:05:59] 2026-03-31 23:04:47,681 | INFO     | adding to output.list: log.49263191._009950.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/60/log.49263191._009950.job.log.tg
[2026-04-01 01:05:59] 2026-03-31 23:04:47,682 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-01 01:05:59] 2026-03-31 23:04:47,682 | INFO     | summary of transferred files:
[2026-04-01 01:05:59] 2026-03-31 23:04:47,682 | INFO     |  -- lfn=log.49263191._009950.job.log.tgz.1, status_code=0, status=transferred
[2026-04-01 01:05:59] 2026-03-31 23:04:47,682 | INFO     | stage-out finished correctly
[2026-04-01 01:05:59] 2026-03-31 23:04:50,525 | WARNING  | process 522991 can no longer be monitored (due to stat problems) - aborting
[2026-04-01 01:05:59] 2026-03-31 23:04:50,525 | INFO     | using path: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7072603525/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 01:05:59] 2026-03-31 23:04:50,531 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-01 01:05:59] 2026-03-31 23:04:50,910 | INFO     | number of running child processes to parent process 522991: 1
[2026-04-01 01:05:59] 2026-03-31 23:04:50,910 | INFO     | maximum number of monitored processes: 6
[2026-04-01 01:05:59] 2026-03-31 23:04:52,379 | INFO     | job 7072603525 has state=finished
[2026-04-01 01:05:59] 2026-03-31 23:04:52,380 | INFO     | preparing for final server update for job 7072603525 in state='finished'
[2026-04-01 01:05:59] 2026-03-31 23:04:52,380 | INFO     | reading metadata from: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7072603525/jobReport.json
[2026-04-01 01:05:59] 2026-03-31 23:04:52,381 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot216/slots/1/workernode_map.json
[2026-04-01 01:05:59] 2026-03-31 23:04:52,381 | INFO     | this job has now completed (state=finished)
[2026-04-01 01:05:59] 2026-03-31 23:04:52,381 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-01 01:05:59] 2026-03-31 23:04:52,381 | INFO     | log transfer has been attempted: DONE
[2026-04-01 01:05:59] 2026-03-31 23:04:52,381 | INFO     | job 7072603525 has finished - writing final server update
[2026-04-01 01:05:59] 2026-03-31 23:04:52,382 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1400890/.job.ad'
[2026-04-01 01:05:59] 2026-03-31 23:04:52,382 | INFO     | total number of processed events: 400 (read)
[2026-04-01 01:05:59] 2026-03-31 23:04:52,399 | INFO     | using path: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7072603525/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 01:05:59] 2026-03-31 23:04:52,399 | INFO     | extracted standard info from prmon json
[2026-04-01 01:05:59] 2026-03-31 23:04:52,399 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 01:05:59] 2026-03-31 23:04:52,399 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 01:05:59] 2026-03-31 23:04:52,399 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 01:05:59] 2026-03-31 23:04:52,400 | INFO     | fitting pss+swap vs Time
[2026-04-01 01:05:59] 2026-03-31 23:04:52,400 | INFO     | sum of square deviations: 2474465.0
[2026-04-01 01:05:59] 2026-03-31 23:04:52,400 | INFO     | sum of deviations: 60151185.0
[2026-04-01 01:05:59] 2026-03-31 23:04:52,400 | INFO     | mean x (centered): 0.0
[2026-04-01 01:05:59] 2026-03-31 23:04:52,400 | INFO     | mean y: 2708313.8
[2026-04-01 01:05:59] 2026-03-31 23:04:52,400 | INFO     | intersect: 2708313.8
[2026-04-01 01:05:59] 2026-03-31 23:04:52,400 | INFO     | chi2: 0.0001554978612521211
[2026-04-01 01:05:59] 2026-03-31 23:04:52,400 | INFO     | current memory leak: 24.31 B/s (using 20 data points, chi2=0.00)
[2026-04-01 01:05:59] 2026-03-31 23:04:52,401 | INFO     | could have reported an average CPU frequency of 3638 MHz (4 samples)
[2026-04-01 01:05:59] 2026-03-31 23:04:52,401 | INFO     | ..............................
[2026-04-01 01:05:59] 2026-03-31 23:04:52,401 | INFO     | . Timing measurements:
[2026-04-01 01:05:59] 2026-03-31 23:04:52,401 | INFO     | . get job = 0 s
[2026-04-01 01:05:59] 2026-03-31 23:04:52,401 | INFO     | . initial setup = 4 s
[2026-04-01 01:05:59] 2026-03-31 23:04:52,401 | INFO     | . payload setup = 6 s
[2026-04-01 01:05:59] 2026-03-31 23:04:52,401 | INFO     | . stage-in = 0 s
[2026-04-01 01:05:59] 2026-03-31 23:04:52,401 | INFO     | . payload execution = 1594 s
[2026-04-01 01:05:59] 2026-03-31 23:04:52,401 | INFO     | . stage-out = 0 s
[2026-04-01 01:05:59] 2026-03-31 23:04:52,401 | INFO     | . log creation = 0 s
[2026-04-01 01:05:59] 2026-03-31 23:04:52,401 | INFO     | ..............................
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | 
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | job summary report
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | --------------------------------------------------
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | PanDA job id: 7072603525
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | task id: 49263191
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | errors: (none)
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | pilot state: finished 
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | transexitcode: 0
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | exeerrorcode: 0
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | exeerrordiag: 
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | exitcode: 0
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | exitmsg: OK
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | cpuconsumptiontime: 17037 s
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | nevents: 400
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | neventsw: 0
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | pid: 522991
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | pgrp: 522991
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | corecount: 12
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | event service: False
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | sizes: {0: 2281601, 10: 2281601, 1604: 2306410, 1605: 2315432, 1608: 2315488, 1610: 2315682}
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | --------------------------------------------------
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | 
[2026-04-01 01:05:59] 2026-03-31 23:04:52,447 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/1
[2026-04-01 01:05:59] 2026-03-31 23:04:52,466 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | job 7072603525 has completed (purged errors)
[2026-04-01 01:05:59] 2026-03-31 23:04:52,467 | INFO     | overall cleanup function is called
[2026-04-01 01:05:59] 2026-03-31 23:04:53,474 | INFO     | --- collectZombieJob: --- 10, [522991]
[2026-04-01 01:05:59] 2026-03-31 23:04:53,475 | INFO     | zombie collector waiting for pid 522991
[2026-04-01 01:05:59] 2026-03-31 23:04:53,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 01:05:59] 2026-03-31 23:04:53,475 | INFO     | collected zombie processes
[2026-04-01 01:05:59] 2026-03-31 23:04:53,475 | INFO     | will attempt to kill all subprocesses of pid=522991
[2026-04-01 01:05:59] 2026-03-31 23:04:53,847 | INFO     | process IDs to be killed: [522991] (in reverse order)
[2026-04-01 01:05:59] 2026-03-31 23:04:53,989 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 01:05:59] 2026-03-31 23:04:53,989 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 01:05:59] 2026-03-31 23:04:54,014 | INFO     | did not find any defunct processes belonging to 522991
[2026-04-01 01:05:59] 2026-03-31 23:04:54,038 | INFO     | did not find any defunct processes belonging to 522991
[2026-04-01 01:05:59] 2026-03-31 23:04:54,039 | INFO     | Ready for new job
[2026-04-01 01:05:59] 2026-03-31 23:04:54,040 | INFO     | **************************************
[2026-04-01 01:05:59] 2026-03-31 23:04:54,040 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-01 01:05:59] 2026-03-31 23:04:54,040 | INFO     | **************************************
[2026-04-01 01:05:59] 2026-03-31 23:04:54,040 | INFO     | 
[2026-04-01 01:05:59] 2026-03-31 23:04:54,045 | INFO     | architecture information:
[2026-04-01 01:05:59] 2026-03-31 23:04:54,046 | INFO     | executing command: cat /etc/os-release
[2026-04-01 01:05:59] 2026-03-31 23:04:54,056 | INFO     | cat /etc/os-release:
[2026-04-01 01:05:59] NAME="CentOS Linux"
[2026-04-01 01:05:59] VERSION="7 (Core)"
[2026-04-01 01:05:59] ID="centos"
[2026-04-01 01:05:59] ID_LIKE="rhel fedora"
[2026-04-01 01:05:59] VERSION_ID="7"
[2026-04-01 01:05:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 01:05:59] ANSI_COLOR="0;31"
[2026-04-01 01:05:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 01:05:59] HOME_URL="https://www.centos.org/"
[2026-04-01 01:05:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 01:05:59] 
[2026-04-01 01:05:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 01:05:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 01:05:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 01:05:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 01:05:59] 
[2026-04-01 01:05:59] 2026-03-31 23:04:54,056 | INFO     | **************************************
[2026-04-01 01:05:59] 2026-03-31 23:04:54,559 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/1
[2026-04-01 01:05:59] 2026-03-31 23:04:54,571 | INFO     | sufficient remaining disk space (233659432960 B)
[2026-04-01 01:05:59] 2026-03-31 23:04:54,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 01:05:59] 2026-03-31 23:04:54,572 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 01:05:59] 2026-03-31 23:04:54,572 | INFO     | update_server=False
[2026-04-01 01:05:59] 2026-03-31 23:04:54,572 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-01 01:05:59] 2026-03-31 23:04:54,572 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 01:05:59] 2026-03-31 23:04:54,572 | INFO     | aborting loop
[2026-04-01 01:05:59] 2026-03-31 23:04:54,987 | INFO     | all payload control threads have been joined
[2026-04-01 01:05:59] 2026-03-31 23:04:55,141 | INFO     | all job control threads have been joined
[2026-04-01 01:05:59] 2026-03-31 23:04:55,242 | INFO     | all data control threads have been joined
[2026-04-01 01:05:59] 2026-03-31 23:04:55,577 | INFO     | [job] retrieve thread has finished
[2026-04-01 01:05:59] 2026-03-31 23:04:55,577 | INFO     | [job] job monitor thread has finished
[2026-04-01 01:05:59] 2026-03-31 23:04:55,722 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 01:05:59] 2026-03-31 23:04:55,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 01:05:59] 2026-03-31 23:04:55,892 | INFO     | [job] validate thread has finished
[2026-04-01 01:05:59] 2026-03-31 23:04:55,929 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 01:05:59] 2026-03-31 23:04:55,993 | INFO     | [payload] control thread has finished
[2026-04-01 01:05:59] 2026-03-31 23:04:56,042 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 01:05:59] 2026-03-31 23:04:56,147 | INFO     | [job] control thread has finished
[2026-04-01 01:05:59] 2026-03-31 23:04:56,222 | INFO     | [data] copytool_in thread has finished
[2026-04-01 01:05:59] 2026-03-31 23:04:56,247 | INFO     | [data] control thread has finished
[2026-04-01 01:05:59] 2026-03-31 23:04:56,394 | INFO     | [payload] failed_post thread has finished
[2026-04-01 01:05:59] 2026-03-31 23:04:56,516 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 01:05:59] 2026-03-31 23:04:56,582 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 01:05:59] 2026-03-31 23:04:57,161 | INFO     | [payload] validate_post thread has finished
[2026-04-01 01:05:59] 2026-03-31 23:04:57,454 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 01:05:59] 2026-03-31 23:04:57,741 | INFO     | [data] copytool_out thread has finished
[2026-04-01 01:05:59] 2026-03-31 23:04:58,460 | INFO     | [job] queue monitor thread has finished
[2026-04-01 01:05:59] 2026-03-31 23:05:00,588 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 01:05:59] 2026-03-31 23:05:24,361 | INFO     | PID=517217 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-01 01:05:59] 2026-03-31 23:05:24,362 | INFO     | .. there are 14 such processes running
[2026-04-01 01:05:59] 2026-03-31 23:05:24,362 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 01:05:59] 2026-03-31 23:05:24,362 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 01:05:59] 2026-03-31 23:05:24,362 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 01:05:59] 2026-03-31 23:05:53,836 | INFO     | [monitor] cgroup control has ended
[2026-04-01 01:05:59] 2026-03-31 23:05:54,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22780091680576)>', '<ExcThread(monitor, started 22779853551360)>']
[2026-04-01 01:05:59] 2026-03-31 23:05:55,505 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 01:05:59] 2026-03-31 23:05:55,506 | INFO     | [monitor] control thread has ended
[2026-04-01 01:05:59] 2026-03-31 23:05:59,635 | INFO     | all workflow threads have been joined
[2026-04-01 01:05:59] 2026-03-31 23:05:59,635 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 01:05:59] 2026-03-31 23:05:59,635 | INFO     | traces error code: 0
[2026-04-01 01:05:59] 2026-03-31 23:05:59,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 01:05:59] 2026-03-31 23:05:59,760 [wrapper] ==== pilot stdout END ====
[2026-04-01 01:05:59] 2026-03-31 23:05:59,762 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 01:05:59] 2026-03-31 23:05:59,764 [wrapper] pilotpid: 517217
[2026-04-01 01:05:59] 2026-03-31 23:05:59,765 [wrapper] Pilot exit status: 0
[2026-04-01 01:05:59] 2026-03-31 23:05:59,771 [wrapper] pandaids: 7072603525
[2026-04-01 01:05:59] 2026-03-31 23:05:59,869 [wrapper] cleanup supervisor_pilot  655285 517218
[2026-04-01 01:05:59] 2026-03-31 23:05:59,871 [wrapper] Test setup, not cleaning
[2026-04-01 01:05:59] 2026-03-31 23:05:59,873 [wrapper] apfmon messages muted
[2026-04-01 01:05:59] 2026-03-31 23:05:59,874 [wrapper] ==== wrapper stdout END ====
[2026-04-01 01:05:59] 2026-03-31 23:05:59,875 [wrapper] ==== wrapper stderr END ====
[2026-04-01 01:05:59]  *** Error codes and diagnostics ***
[2026-04-01 01:05:59]     "exeErrorCode": 0,
[2026-04-01 01:05:59]     "pilotErrorCode": 0,
[2026-04-01 01:05:59]  *** Listing of results directory ***
[2026-04-01 01:05:59] total 413496
[2026-04-01 01:05:59] -rw-r--r--. 1 boinc boinc    644034 Mar 31 01:47 pilot3.tar.gz
[2026-04-01 01:05:59] -rwx------. 1 boinc boinc     36322 Mar 31 01:47 runpilot2-wrapper.sh
[2026-04-01 01:05:59] -rw-r--r--. 1 boinc boinc      5118 Mar 31 01:48 queuedata.json
[2026-04-01 01:05:59] -rw-r--r--. 1 boinc boinc       100 Apr  1 00:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 01:05:59] -rwxr-xr-x. 1 boinc boinc      7986 Apr  1 00:37 run_atlas
[2026-04-01 01:05:59] -rw-r--r--. 1 boinc boinc       105 Apr  1 00:37 job.xml
[2026-04-01 01:05:59] -rw-r--r--. 2 boinc boinc 222376470 Apr  1 00:37 EVNT.49263189._000423.pool.root.1
[2026-04-01 01:05:59] -rw-r--r--. 2 boinc boinc     15845 Apr  1 00:37 start_atlas.sh
[2026-04-01 01:05:59] drwxrwx--x. 2 boinc boinc      4096 Apr  1 00:37 shared
[2026-04-01 01:05:59] -rw-r--r--. 2 boinc boinc    656748 Apr  1 00:37 input.tar.gz
[2026-04-01 01:05:59] -rw-r--r--. 1 boinc boinc      6712 Apr  1 00:37 init_data.xml
[2026-04-01 01:05:59] -rw-r--r--. 1 boinc boinc         0 Apr  1 00:37 boinc_lockfile
[2026-04-01 01:05:59] -rw-r--r--. 1 boinc boinc      2575 Apr  1 00:37 pandaJob.out
[2026-04-01 01:05:59] -rw-------. 1 boinc boinc   1005014 Apr  1 00:37 agis_schedconf.cvmfs.json
[2026-04-01 01:05:59] -rw-------. 1 boinc boinc   1511579 Apr  1 00:37 agis_ddmendpoints.agis.ALL.json
[2026-04-01 01:05:59] -rw-------. 1 boinc boinc       445 Apr  1 00:37 workernode_map.json
[2026-04-01 01:05:59] drwx------. 5 boinc boinc      4096 Apr  1 00:37 pilot3
[2026-04-01 01:05:59] -rw-------. 1 boinc boinc 195877819 Apr  1 01:04 HITS.49263191._009950.pool.root.1
[2026-04-01 01:05:59] -rw-r--r--. 1 boinc boinc       529 Apr  1 01:04 boinc_task_state.xml
[2026-04-01 01:05:59] -rw-------. 1 boinc boinc      1031 Apr  1 01:04 memory_monitor_summary.json
[2026-04-01 01:05:59] -rw-------. 1 boinc boinc    348283 Apr  1 01:04 log.49263191._009950.job.log.tgz.1
[2026-04-01 01:05:59] -rw-------. 1 boinc boinc      6380 Apr  1 01:04 heartbeat_new.json
[2026-04-01 01:05:59] -rw-------. 1 boinc boinc      6271 Apr  1 01:04 heartbeat.json
[2026-04-01 01:05:59] -rw-------. 1 boinc boinc        95 Apr  1 01:05 pilot_heartbeat.json
[2026-04-01 01:05:59] -rw-r--r--. 1 boinc boinc      8192 Apr  1 01:05 boinc_mmap_file
[2026-04-01 01:05:59] -rw-r--r--. 1 boinc boinc        27 Apr  1 01:05 wrapper_checkpoint.txt
[2026-04-01 01:05:59] -rw-------. 1 boinc boinc      4829 Apr  1 01:05 pilotlog.txt
[2026-04-01 01:05:59] -rw-------. 1 boinc boinc    198023 Apr  1 01:05 log.49263191._009950.job.log.1
[2026-04-01 01:05:59] -rw-------. 1 boinc boinc       357 Apr  1 01:05 output.list
[2026-04-01 01:05:59] -rw-r--r--. 1 boinc boinc       620 Apr  1 01:05 runtime_log
[2026-04-01 01:05:59] -rw-------. 1 boinc boinc    563200 Apr  1 01:05 result.tar.gz
[2026-04-01 01:05:59] -rw-r--r--. 1 boinc boinc      9223 Apr  1 01:05 runtime_log.err
[2026-04-01 01:05:59] -rw-------. 1 boinc boinc       658 Apr  1 01:05 VdfLDmxVbR9n9Rq4apOajLDm4fhM0noT9bVoINGKDm3HRKDmMacHnn.diag
[2026-04-01 01:05:59] -rw-r--r--. 1 boinc boinc     20939 Apr  1 01:05 stderr.txt
[2026-04-01 01:05:59] HITS file was successfully produced:
[2026-04-01 01:05:59] -rw-------. 1 boinc boinc 195877819 Apr  1 01:04 shared/HITS.pool.root.1
[2026-04-01 01:05:59]  *** Contents of shared directory: ***
[2026-04-01 01:05:59] total 409676
[2026-04-01 01:05:59] -rw-r--r--. 2 boinc boinc 222376470 Apr  1 00:37 ATLAS.root_0
[2026-04-01 01:05:59] -rw-r--r--. 2 boinc boinc     15845 Apr  1 00:37 start_atlas.sh
[2026-04-01 01:05:59] -rw-r--r--. 2 boinc boinc    656748 Apr  1 00:37 input.tar.gz
[2026-04-01 01:05:59] -rw-------. 1 boinc boinc 195877819 Apr  1 01:04 HITS.pool.root.1
[2026-04-01 01:05:59] -rw-------. 1 boinc boinc    563200 Apr  1 01:05 result.tar.gz
01:06:01 (512655): run_atlas exited; CPU time 17077.736509
01:06:01 (512655): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN