Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
15:46:17 (3526480): wrapper (7.7.26015): starting
15:46:17 (3526480): wrapper: running run_atlas (--nthreads 12)
[2026-04-05 15:46:17] Arguments: --nthreads 12
[2026-04-05 15:46:17] Threads: 12
[2026-04-05 15:46:17] Checking for CVMFS
[2026-04-05 15:46:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-05 15:46:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-05 15:46:18] Running cvmfs_config stat atlas.cern.ch
[2026-04-05 15:46:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-05 15:46:19] 2.13.3.0 3021178 16393 74320 158117 2 188 2060877 4096001 9210 130560 0 80672987 99.987 984781 2218 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-05 15:46:19] CVMFS is ok
[2026-04-05 15:46:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 15:46:19] Checking for apptainer binary...
[2026-04-05 15:46:19] apptainer is not installed, using version from CVMFS
[2026-04-05 15:46:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 15:46:20] epyc7v12
[2026-04-05 15:46:20] apptainer works
[2026-04-05 15:46:20] Set ATHENA_PROC_NUMBER=12
[2026-04-05 15:46:20] Set ATHENA_CORE_NUMBER=12
[2026-04-05 15:46:20] Starting ATLAS job with PandaID=7072724535
[2026-04-05 15:46:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31428/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-05 16:55:20]  *** The last 200 lines of the pilot log: ***
[2026-04-05 16:55:20]  filetype=log
[2026-04-05 16:55:20]  guid=c7a7a145-e082-43e2-bd5d-6a6050ab14e3
[2026-04-05 16:55:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-05 16:55:20]  is_altstaged=None
[2026-04-05 16:55:20]  is_tar=False
[2026-04-05 16:55:20]  lfn=log.49263191._011898.job.log.tgz.1
[2026-04-05 16:55:20]  mtime=0
[2026-04-05 16:55:20]  protocol_id=None
[2026-04-05 16:55:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-05 16:55:20]  replicas=None
[2026-04-05 16:55:20]  scope=mc23_13p6TeV
[2026-04-05 16:55:20]  status=None
[2026-04-05 16:55:20]  status_code=0
[2026-04-05 16:55:20]  storage_token=
[2026-04-05 16:55:20]  surl=/opt/boinc/instance_homes/boinc_31428/slots/0/PanDA_Pilot-7072724535/log.49263191._011898.job.log.tgz.1
[2026-04-05 16:55:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/93/log.49263191._011898.job.log.tgz.1
[2026-04-05 16:55:20]  workdir=None
[2026-04-05 16:55:20] ]
[2026-04-05 16:55:20] 2026-04-05 16:54:40,425 | INFO     | transferring file log.49263191._011898.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31428/slots/0/PanDA_Pilot-7072724535/log.49263191._011898.job.log.tgz.1 t
[2026-04-05 16:55:20] 2026-04-05 16:54:40,426 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31428/slots/0/PanDA_Pilot-7072724535/log.49263191._011898.job.log.tgz.1 /opt/boinc/instance_home
[2026-04-05 16:55:20] 2026-04-05 16:54:40,477 | INFO     | adding to output.list: log.49263191._011898.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/93/log.49263191._011898.job.log.tg
[2026-04-05 16:55:20] 2026-04-05 16:54:40,480 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-05 16:55:20] 2026-04-05 16:54:40,480 | INFO     | summary of transferred files:
[2026-04-05 16:55:20] 2026-04-05 16:54:40,480 | INFO     |  -- lfn=log.49263191._011898.job.log.tgz.1, status_code=0, status=transferred
[2026-04-05 16:55:20] 2026-04-05 16:54:40,480 | INFO     | stage-out finished correctly
[2026-04-05 16:55:20] 2026-04-05 16:54:41,706 | INFO     | monitor loop #288: job 0:7072724535 is in state 'finished'
[2026-04-05 16:55:20] 2026-04-05 16:54:41,707 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-05 16:55:20] 2026-04-05 16:54:43,164 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-05 16:55:20] 2026-04-05 16:54:44,209 | INFO     | monitor loop #289: job 0:7072724535 is in state 'finished'
[2026-04-05 16:55:20] 2026-04-05 16:54:44,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-05 16:55:20] 2026-04-05 16:54:45,983 | INFO     | job 7072724535 has state=finished
[2026-04-05 16:55:20] 2026-04-05 16:54:45,984 | INFO     | preparing for final server update for job 7072724535 in state='finished'
[2026-04-05 16:55:20] 2026-04-05 16:54:45,984 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31428/slots/0/PanDA_Pilot-7072724535/jobReport.json
[2026-04-05 16:55:20] 2026-04-05 16:54:45,990 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31428/slots/0/workernode_map.json
[2026-04-05 16:55:20] 2026-04-05 16:54:45,991 | INFO     | this job has now completed (state=finished)
[2026-04-05 16:55:20] 2026-04-05 16:54:45,991 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-05 16:55:20] 2026-04-05 16:54:45,991 | INFO     | log transfer has been attempted: DONE
[2026-04-05 16:55:20] 2026-04-05 16:54:45,991 | INFO     | job 7072724535 has finished - writing final server update
[2026-04-05 16:55:20] 2026-04-05 16:54:45,992 | INFO     | total number of processed events: 400 (read)
[2026-04-05 16:55:20] 2026-04-05 16:54:46,021 | INFO     | using path: /opt/boinc/instance_homes/boinc_31428/slots/0/PanDA_Pilot-7072724535/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 16:55:20] 2026-04-05 16:54:46,021 | INFO     | extracted standard info from prmon json
[2026-04-05 16:55:20] 2026-04-05 16:54:46,021 | INFO     | extracted standard memory fields from prmon json
[2026-04-05 16:55:20] 2026-04-05 16:54:46,022 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-05 16:55:20] 2026-04-05 16:54:46,022 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-05 16:55:20] 2026-04-05 16:54:46,024 | INFO     | fitting pss+swap vs Time
[2026-04-05 16:55:20] 2026-04-05 16:54:46,024 | INFO     | sum of square deviations: 66959395.0
[2026-04-05 16:55:20] 2026-04-05 16:54:46,024 | INFO     | sum of deviations: -869016674.9999999
[2026-04-05 16:55:20] 2026-04-05 16:54:46,024 | INFO     | mean x (centered): 0.0
[2026-04-05 16:55:20] 2026-04-05 16:54:46,024 | INFO     | mean y: 2689951.966666667
[2026-04-05 16:55:20] 2026-04-05 16:54:46,025 | INFO     | intersect: 2689951.966666667
[2026-04-05 16:55:20] 2026-04-05 16:54:46,025 | INFO     | chi2: 0.0031516762644939415
[2026-04-05 16:55:20] 2026-04-05 16:54:46,025 | INFO     | current memory leak: -12.98 B/s (using 60 data points, chi2=0.00)
[2026-04-05 16:55:20] 2026-04-05 16:54:46,025 | INFO     | could have reported an average CPU frequency of 2393 MHz (6 samples)
[2026-04-05 16:55:20] 2026-04-05 16:54:46,025 | INFO     | ..............................
[2026-04-05 16:55:20] 2026-04-05 16:54:46,026 | INFO     | . Timing measurements:
[2026-04-05 16:55:20] 2026-04-05 16:54:46,026 | INFO     | . get job = 0 s
[2026-04-05 16:55:20] 2026-04-05 16:54:46,026 | INFO     | . initial setup = 8 s
[2026-04-05 16:55:20] 2026-04-05 16:54:46,026 | INFO     | . payload setup = 14 s
[2026-04-05 16:55:20] 2026-04-05 16:54:46,026 | INFO     | . stage-in = 0 s
[2026-04-05 16:55:20] 2026-04-05 16:54:46,026 | INFO     | . payload execution = 4044 s
[2026-04-05 16:55:20] 2026-04-05 16:54:46,026 | INFO     | . stage-out = 1 s
[2026-04-05 16:55:20] 2026-04-05 16:54:46,026 | INFO     | . log creation = 0 s
[2026-04-05 16:55:20] 2026-04-05 16:54:46,026 | INFO     | ..............................
[2026-04-05 16:55:20] 2026-04-05 16:54:46,226 | INFO     | 
[2026-04-05 16:55:20] 2026-04-05 16:54:46,226 | INFO     | job summary report
[2026-04-05 16:55:20] 2026-04-05 16:54:46,226 | INFO     | --------------------------------------------------
[2026-04-05 16:55:20] 2026-04-05 16:54:46,227 | INFO     | PanDA job id: 7072724535
[2026-04-05 16:55:20] 2026-04-05 16:54:46,227 | INFO     | task id: 49263191
[2026-04-05 16:55:20] 2026-04-05 16:54:46,227 | INFO     | errors: (none)
[2026-04-05 16:55:20] 2026-04-05 16:54:46,227 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-05 16:55:20] 2026-04-05 16:54:46,227 | INFO     | pilot state: finished 
[2026-04-05 16:55:20] 2026-04-05 16:54:46,227 | INFO     | transexitcode: 0
[2026-04-05 16:55:20] 2026-04-05 16:54:46,227 | INFO     | exeerrorcode: 0
[2026-04-05 16:55:20] 2026-04-05 16:54:46,227 | INFO     | exeerrordiag: 
[2026-04-05 16:55:20] 2026-04-05 16:54:46,227 | INFO     | exitcode: 0
[2026-04-05 16:55:20] 2026-04-05 16:54:46,227 | INFO     | exitmsg: OK
[2026-04-05 16:55:20] 2026-04-05 16:54:46,227 | INFO     | cpuconsumptiontime: 41563 s
[2026-04-05 16:55:20] 2026-04-05 16:54:46,228 | INFO     | nevents: 400
[2026-04-05 16:55:20] 2026-04-05 16:54:46,228 | INFO     | neventsw: 0
[2026-04-05 16:55:20] 2026-04-05 16:54:46,228 | INFO     | pid: 3536029
[2026-04-05 16:55:20] 2026-04-05 16:54:46,228 | INFO     | pgrp: 3536029
[2026-04-05 16:55:20] 2026-04-05 16:54:46,229 | INFO     | corecount: 12
[2026-04-05 16:55:20] 2026-04-05 16:54:46,229 | INFO     | event service: False
[2026-04-05 16:55:20] 2026-04-05 16:54:46,229 | INFO     | sizes: {0: 2279759, 1: 2281644, 12: 2281644, 4062: 2307647, 4064: 2316691, 4066: 2316747, 4069: 2317069}
[2026-04-05 16:55:20] 2026-04-05 16:54:46,229 | INFO     | --------------------------------------------------
[2026-04-05 16:55:20] 2026-04-05 16:54:46,229 | INFO     | 
[2026-04-05 16:55:20] 2026-04-05 16:54:46,230 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31428/slots/0
[2026-04-05 16:55:20] 2026-04-05 16:54:46,290 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,291 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,291 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,291 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,291 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,291 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,291 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,291 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,291 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,292 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,292 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,292 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,292 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,292 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,292 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,292 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,292 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,292 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-05 16:55:20] 2026-04-05 16:54:46,292 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,293 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-05 16:55:20] 2026-04-05 16:54:46,293 | INFO     | job 7072724535 has completed (purged errors)
[2026-04-05 16:55:20] 2026-04-05 16:54:46,293 | INFO     | overall cleanup function is called
[2026-04-05 16:55:20] 2026-04-05 16:54:47,312 | INFO     | --- collectZombieJob: --- 10, [3536029]
[2026-04-05 16:55:20] 2026-04-05 16:54:47,312 | INFO     | zombie collector waiting for pid 3536029
[2026-04-05 16:55:20] 2026-04-05 16:54:47,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-05 16:55:20] 2026-04-05 16:54:47,313 | INFO     | collected zombie processes
[2026-04-05 16:55:20] 2026-04-05 16:54:47,313 | INFO     | will attempt to kill all subprocesses of pid=3536029
[2026-04-05 16:55:20] 2026-04-05 16:54:48,148 | INFO     | process IDs to be killed: [3536029] (in reverse order)
[2026-04-05 16:55:20] 2026-04-05 16:54:48,537 | WARNING  | found no corresponding commands to process id(s)
[2026-04-05 16:55:20] 2026-04-05 16:54:48,537 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-05 16:55:20] 2026-04-05 16:54:48,567 | INFO     | did not find any defunct processes belonging to 3536029
[2026-04-05 16:55:20] 2026-04-05 16:54:48,596 | INFO     | did not find any defunct processes belonging to 3536029
[2026-04-05 16:55:20] 2026-04-05 16:54:48,597 | INFO     | Ready for new job
[2026-04-05 16:55:20] 2026-04-05 16:54:48,601 | INFO     | **************************************
[2026-04-05 16:55:20] 2026-04-05 16:54:48,601 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-05 16:55:20] 2026-04-05 16:54:48,601 | INFO     | **************************************
[2026-04-05 16:55:20] 2026-04-05 16:54:48,601 | INFO     | 
[2026-04-05 16:55:20] 2026-04-05 16:54:48,620 | INFO     | architecture information:
[2026-04-05 16:55:20] 2026-04-05 16:54:48,623 | INFO     | executing command: cat /etc/os-release
[2026-04-05 16:55:20] 2026-04-05 16:54:48,665 | INFO     | cat /etc/os-release:
[2026-04-05 16:55:20] NAME="CentOS Linux"
[2026-04-05 16:55:20] VERSION="7 (Core)"
[2026-04-05 16:55:20] ID="centos"
[2026-04-05 16:55:20] ID_LIKE="rhel fedora"
[2026-04-05 16:55:20] VERSION_ID="7"
[2026-04-05 16:55:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-05 16:55:20] ANSI_COLOR="0;31"
[2026-04-05 16:55:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-05 16:55:20] HOME_URL="https://www.centos.org/"
[2026-04-05 16:55:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-05 16:55:20] 
[2026-04-05 16:55:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-05 16:55:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-05 16:55:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-05 16:55:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-05 16:55:20] 
[2026-04-05 16:55:20] 2026-04-05 16:54:48,666 | INFO     | **************************************
[2026-04-05 16:55:20] 2026-04-05 16:54:49,168 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31428/slots/0
[2026-04-05 16:55:20] 2026-04-05 16:54:49,214 | INFO     | sufficient remaining disk space (409853755392 B)
[2026-04-05 16:55:20] 2026-04-05 16:54:49,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-05 16:55:20] 2026-04-05 16:54:49,214 | INFO     | current server update state: UPDATING_FINAL
[2026-04-05 16:55:20] 2026-04-05 16:54:49,214 | INFO     | update_server=False
[2026-04-05 16:55:20] 2026-04-05 16:54:49,215 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-05 16:55:20] 2026-04-05 16:54:49,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-05 16:55:20] 2026-04-05 16:54:49,219 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-05 16:55:20] 2026-04-05 16:54:49,219 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-05 16:55:20] 2026-04-05 16:54:49,219 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-05 16:55:20] 2026-04-05 16:54:49,220 | INFO     | will abort loop
[2026-04-05 16:55:20] 2026-04-05 16:54:49,278 | INFO     | all payload control threads have been joined
[2026-04-05 16:55:20] 2026-04-05 16:54:49,332 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-05 16:55:20] 2026-04-05 16:54:49,888 | INFO     | all data control threads have been joined
[2026-04-05 16:55:20] 2026-04-05 16:54:50,089 | INFO     | all job control threads have been joined
[2026-04-05 16:55:20] 2026-04-05 16:54:50,220 | INFO     | [job] retrieve thread has finished
[2026-04-05 16:55:20] 2026-04-05 16:54:50,226 | INFO     | [job] job monitor thread has finished
[2026-04-05 16:55:20] 2026-04-05 16:54:50,274 | INFO     | [payload] execute_payloads thread has finished
[2026-04-05 16:55:20] 2026-04-05 16:54:50,283 | INFO     | [payload] control thread has finished
[2026-04-05 16:55:20] 2026-04-05 16:54:50,338 | INFO     | [job] validate thread has finished
[2026-04-05 16:55:20] 2026-04-05 16:54:50,670 | INFO     | [job] create_data_payload thread has finished
[2026-04-05 16:55:20] 2026-04-05 16:54:50,764 | INFO     | [payload] validate_pre thread has finished
[2026-04-05 16:55:20] 2026-04-05 16:54:50,893 | INFO     | [data] control thread has finished
[2026-04-05 16:55:20] 2026-04-05 16:54:51,095 | INFO     | [job] control thread has finished
[2026-04-05 16:55:20] 2026-04-05 16:54:51,155 | INFO     | [payload] validate_post thread has finished
[2026-04-05 16:55:20] 2026-04-05 16:54:51,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-05 16:55:20] 2026-04-05 16:54:51,220 | INFO     | [data] copytool_out thread has finished
[2026-04-05 16:55:20] 2026-04-05 16:54:51,227 | INFO     | [data] copytool_in thread has finished
[2026-04-05 16:55:20] 2026-04-05 16:54:51,291 | INFO     | [payload] failed_post thread has finished
[2026-04-05 16:55:20] 2026-04-05 16:54:51,321 | INFO     | [monitor] cgroup control has ended
[2026-04-05 16:55:20] 2026-04-05 16:54:52,222 | INFO     | [job] queue monitor thread has finished
[2026-04-05 16:55:20] 2026-04-05 16:54:53,338 | INFO     | [data] queue_monitor thread has finished
[2026-04-05 16:55:20] 2026-04-05 16:54:59,901 | INFO     | job.realtimelogging is not enabled
[2026-04-05 16:55:20] 2026-04-05 16:55:00,906 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-05 16:55:20] 2026-04-05 16:55:02,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123952081377088)>', '<ExcThread(monitor, started 123951262979840)>']
[2026-04-05 16:55:20] 2026-04-05 16:55:07,701 | INFO     | all workflow threads have been joined
[2026-04-05 16:55:20] 2026-04-05 16:55:07,701 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-05 16:55:20] 2026-04-05 16:55:07,702 | INFO     | traces error code: 0
[2026-04-05 16:55:20] 2026-04-05 16:55:07,702 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-05 16:55:20] 2026-04-05 16:55:19,351 | INFO     | PID=3531001 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-05 16:55:20] 2026-04-05 16:55:19,352 | INFO     | .. there are 12 such processes running
[2026-04-05 16:55:20] 2026-04-05 16:55:19,352 | INFO     | found 0 job(s) in 20 queues
[2026-04-05 16:55:20] 2026-04-05 16:55:19,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-05 16:55:20] 2026-04-05 16:55:19,352 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-05 16:55:20] 2026-04-05 16:55:19,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-05 16:55:20] 2026-04-05 16:55:19,352 | INFO     | [monitor] control thread has ended
[2026-04-05 16:55:20] 2026-04-05 16:55:19,544 [wrapper] ==== pilot stdout END ====
[2026-04-05 16:55:20] 2026-04-05 16:55:19,556 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-05 16:55:20] 2026-04-05 16:55:19,566 [wrapper] pilotpid: 3531001
[2026-04-05 16:55:20] 2026-04-05 16:55:19,574 [wrapper] Pilot exit status: 0
[2026-04-05 16:55:20] 2026-04-05 16:55:19,607 [wrapper] pandaids: 7072724535
[2026-04-05 16:55:20] 2026-04-05 16:55:19,757 [wrapper] cleanup supervisor_pilot 3699327 3531002
[2026-04-05 16:55:20] 2026-04-05 16:55:19,766 [wrapper] Test setup, not cleaning
[2026-04-05 16:55:20] 2026-04-05 16:55:19,776 [wrapper] apfmon messages muted
[2026-04-05 16:55:20] 2026-04-05 16:55:19,786 [wrapper] ==== wrapper stdout END ====
[2026-04-05 16:55:20] 2026-04-05 16:55:19,795 [wrapper] ==== wrapper stderr END ====
[2026-04-05 16:55:20]  *** Error codes and diagnostics ***
[2026-04-05 16:55:20]     "exeErrorCode": 0,
[2026-04-05 16:55:20]     "pilotErrorCode": 0,
[2026-04-05 16:55:20]  *** Listing of results directory ***
[2026-04-05 16:55:20] total 417720
[2026-04-05 16:55:20] -rw-r--r-- 1 boinc boinc    644034 Mar 31 02:18 pilot3.tar.gz
[2026-04-05 16:55:20] -rwx------ 1 boinc boinc     36322 Mar 31 02:21 runpilot2-wrapper.sh
[2026-04-05 16:55:20] -rw-r--r-- 1 boinc boinc      5118 Mar 31 02:23 queuedata.json
[2026-04-05 16:55:20] -rw-rw-r-- 1 boinc boinc       100 Apr  5 15:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-05 16:55:20] -rwxr-xr-x 1 boinc boinc      7986 Apr  5 15:46 run_atlas
[2026-04-05 16:55:20] -rw-rw-r-- 1 boinc boinc       105 Apr  5 15:46 job.xml
[2026-04-05 16:55:20] -rw-r--r-- 2 boinc boinc 224611357 Apr  5 15:46 EVNT.49263189._000271.pool.root.1
[2026-04-05 16:55:20] -rw-r--r-- 2 boinc boinc     15845 Apr  5 15:46 start_atlas.sh
[2026-04-05 16:55:20] drwxrwx--x 2 boinc boinc      4096 Apr  5 15:46 shared
[2026-04-05 16:55:20] -rw-r--r-- 2 boinc boinc    656755 Apr  5 15:46 input.tar.gz
[2026-04-05 16:55:20] -rw-rw-r-- 1 boinc boinc      6555 Apr  5 15:46 init_data.xml
[2026-04-05 16:55:20] -rw-rw-r-- 1 boinc boinc         0 Apr  5 15:46 boinc_setup_complete
[2026-04-05 16:55:20] -rw-rw-r-- 1 boinc boinc         0 Apr  5 15:46 boinc_lockfile
[2026-04-05 16:55:20] -rw-rw-r-- 1 boinc boinc      2577 Apr  5 15:46 pandaJob.out
[2026-04-05 16:55:20] -rw------- 1 boinc boinc   1005096 Apr  5 15:46 agis_schedconf.cvmfs.json
[2026-04-05 16:55:20] -rw------- 1 boinc boinc   1511579 Apr  5 15:46 agis_ddmendpoints.agis.ALL.json
[2026-04-05 16:55:20] -rw------- 1 boinc boinc       417 Apr  5 15:46 workernode_map.json
[2026-04-05 16:55:20] drwx------ 5 boinc boinc      4096 Apr  5 15:46 pilot3
[2026-04-05 16:55:20] -rw------- 1 boinc boinc 197488002 Apr  5 16:53 HITS.49263191._011898.pool.root.1
[2026-04-05 16:55:20] -rw-rw-r-- 1 boinc boinc       529 Apr  5 16:53 boinc_task_state.xml
[2026-04-05 16:55:20] -rw------- 1 boinc boinc      1020 Apr  5 16:54 memory_monitor_summary.json
[2026-04-05 16:55:20] -rw------- 1 boinc boinc    373267 Apr  5 16:54 log.49263191._011898.job.log.tgz.1
[2026-04-05 16:55:20] -rw------- 1 boinc boinc        95 Apr  5 16:54 pilot_heartbeat.json
[2026-04-05 16:55:20] -rw------- 1 boinc boinc      6296 Apr  5 16:54 heartbeat_new.json
[2026-04-05 16:55:20] -rw------- 1 boinc boinc      6187 Apr  5 16:54 heartbeat.json
[2026-04-05 16:55:20] -rw-rw-r-- 1 boinc boinc        27 Apr  5 16:55 wrapper_checkpoint.txt
[2026-04-05 16:55:20] -rw-rw-r-- 1 boinc boinc      8192 Apr  5 16:55 boinc_mmap_file
[2026-04-05 16:55:20] -rw------- 1 boinc boinc       823 Apr  5 16:55 pilotlog.txt
[2026-04-05 16:55:20] -rw------- 1 boinc boinc    413939 Apr  5 16:55 log.49263191._011898.job.log.1
[2026-04-05 16:55:20] -rw------- 1 boinc boinc       357 Apr  5 16:55 output.list
[2026-04-05 16:55:20] -rw-rw-r-- 1 boinc boinc       620 Apr  5 16:55 runtime_log
[2026-04-05 16:55:20] -rw------- 1 boinc boinc    808960 Apr  5 16:55 result.tar.gz
[2026-04-05 16:55:20] -rw-rw-r-- 1 boinc boinc      9166 Apr  5 16:55 runtime_log.err
[2026-04-05 16:55:20] -rw------- 1 boinc boinc       652 Apr  5 16:55 gusLDmBudR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmXjPKDmM8GIsn.diag
[2026-04-05 16:55:20] -rw-rw-r-- 1 boinc boinc     21085 Apr  5 16:55 stderr.txt
[2026-04-05 16:55:20] HITS file was successfully produced:
[2026-04-05 16:55:20] -rw------- 1 boinc boinc 197488002 Apr  5 16:53 shared/HITS.pool.root.1
[2026-04-05 16:55:20]  *** Contents of shared directory: ***
[2026-04-05 16:55:20] total 413668
[2026-04-05 16:55:20] -rw-r--r-- 2 boinc boinc 224611357 Apr  5 15:46 ATLAS.root_0
[2026-04-05 16:55:20] -rw-r--r-- 2 boinc boinc     15845 Apr  5 15:46 start_atlas.sh
[2026-04-05 16:55:20] -rw-r--r-- 2 boinc boinc    656755 Apr  5 15:46 input.tar.gz
[2026-04-05 16:55:20] -rw------- 1 boinc boinc 197488002 Apr  5 16:53 HITS.pool.root.1
[2026-04-05 16:55:20] -rw------- 1 boinc boinc    808960 Apr  5 16:55 result.tar.gz
16:55:21 (3526480): run_atlas exited; CPU time 41751.718047
16:55:21 (3526480): called boinc_finish(0)

</stderr_txt>
]]>

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