Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:11:25 (5058): wrapper (7.7.26015): starting
15:11:25 (5058): wrapper: running run_atlas (--nthreads 8)
[2026-03-31 15:11:25] Arguments: --nthreads 8
[2026-03-31 15:11:25] Threads: 8
[2026-03-31 15:11:25] Checking for CVMFS
[2026-03-31 15:11:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 15:11:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 15:11:28] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 15:11:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 15:11:29] 2.11.2.0 23466 152081 140816 157914 3 177 23289354 25165825 4688 130560 157 46745749 99.817 35043901 1040 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-31 15:11:29] CVMFS is ok
[2026-03-31 15:11:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 15:11:29] Checking for apptainer binary...
[2026-03-31 15:11:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 15:11:29] Running /usr/bin/apptainer --version
[2026-03-31 15:11:29] apptainer version 1.3.2-1.el7
[2026-03-31 15:11:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 15:11:35] cg-vwn389.simple-grid.lan
[2026-03-31 15:11:35] apptainer works
[2026-03-31 15:11:35] Set ATHENA_PROC_NUMBER=8
[2026-03-31 15:11:35] Set ATHENA_CORE_NUMBER=8
[2026-03-31 15:11:35] Starting ATLAS job with PandaID=7072726402
[2026-03-31 15:11:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 19:49:18]  *** The last 200 lines of the pilot log: ***
[2026-03-31 19:49:19] 2026-03-31 17:48:16,108 | INFO     | log transfer has been attempted: DONE
[2026-03-31 19:49:19] 2026-03-31 17:48:16,108 | INFO     | job 7072726402 has finished - writing final server update
[2026-03-31 19:49:19] 2026-03-31 17:48:16,108 | INFO     | total number of processed events: 400 (read)
[2026-03-31 19:49:19] 2026-03-31 17:48:16,110 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-7072726402/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 19:49:19] 2026-03-31 17:48:16,111 | INFO     | extracted standard info from prmon json
[2026-03-31 19:49:19] 2026-03-31 17:48:16,111 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 19:49:19] 2026-03-31 17:48:16,112 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 19:49:19] 2026-03-31 17:48:16,112 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 19:49:19] 2026-03-31 17:48:16,117 | INFO     | fitting pss+swap vs Time
[2026-03-31 19:49:19] 2026-03-31 17:48:16,118 | INFO     | sum of square deviations: 5576683165.5
[2026-03-31 19:49:19] 2026-03-31 17:48:16,121 | INFO     | sum of deviations: -7784215703.500019
[2026-03-31 19:49:19] 2026-03-31 17:48:16,121 | INFO     | mean x (centered): 0.0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,122 | INFO     | mean y: 2567920.889312977
[2026-03-31 19:49:19] 2026-03-31 17:48:16,122 | INFO     | intersect: 2567920.889312977
[2026-03-31 19:49:19] 2026-03-31 17:48:16,127 | INFO     | chi2: 7.040493326082543
[2026-03-31 19:49:19] 2026-03-31 17:48:16,127 | INFO     | sum of square deviations: 5263458688.0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,130 | INFO     | sum of deviations: 13016647626.000023
[2026-03-31 19:49:19] 2026-03-31 17:48:16,130 | INFO     | mean x (centered): 0.0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,130 | INFO     | mean y: 2577912.840466926
[2026-03-31 19:49:19] 2026-03-31 17:48:16,130 | INFO     | intersect: 2577912.840466926
[2026-03-31 19:49:19] 2026-03-31 17:48:16,131 | INFO     | chi2: 6.266017606810057
[2026-03-31 19:49:19] 2026-03-31 17:48:16,131 | INFO     | current chi2=6.266017606810057 (change=11.000304714491053 %)
[2026-03-31 19:49:19] 2026-03-31 17:48:16,135 | INFO     | right removable region: 256
[2026-03-31 19:49:19] 2026-03-31 17:48:16,136 | INFO     | sum of square deviations: 5263458688.0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,138 | INFO     | sum of deviations: -103548996634.99998
[2026-03-31 19:49:19] 2026-03-31 17:48:16,138 | INFO     | mean x (centered): 0.0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,138 | INFO     | mean y: 2614513.5447470816
[2026-03-31 19:49:19] 2026-03-31 17:48:16,139 | INFO     | intersect: 2614513.5447470816
[2026-03-31 19:49:19] 2026-03-31 17:48:16,139 | INFO     | chi2: 2.1906574929006553
[2026-03-31 19:49:19] 2026-03-31 17:48:16,139 | INFO     | current chi2=2.1906574929006553 (change=68.88488644985938 %)
[2026-03-31 19:49:19] 2026-03-31 17:48:16,140 | INFO     | sum of square deviations: 4962187923.0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,142 | INFO     | sum of deviations: -140586466736.0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,142 | INFO     | mean x (centered): 0.0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,142 | INFO     | mean y: 2633132.198412698
[2026-03-31 19:49:19] 2026-03-31 17:48:16,143 | INFO     | intersect: 2633132.198412698
[2026-03-31 19:49:19] 2026-03-31 17:48:16,143 | INFO     | chi2: 1.108305189084016
[2026-03-31 19:49:19] 2026-03-31 17:48:16,143 | INFO     | current chi2=1.108305189084016 (change=49.407646212347586 %)
[2026-03-31 19:49:19] 2026-03-31 17:48:16,144 | INFO     | sum of square deviations: 4672638308.0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,146 | INFO     | sum of deviations: -142292675471.0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,146 | INFO     | mean x (centered): 0.0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,147 | INFO     | mean y: 2634002.7408906883
[2026-03-31 19:49:19] 2026-03-31 17:48:16,147 | INFO     | intersect: 2634002.7408906883
[2026-03-31 19:49:19] 2026-03-31 17:48:16,147 | INFO     | chi2: 1.0571207436502594
[2026-03-31 19:49:19] 2026-03-31 17:48:16,147 | INFO     | current chi2=1.0571207436502594 (change=4.618262725635996 %)
[2026-03-31 19:49:19] 2026-03-31 17:48:16,147 | INFO     | left removable region: 15
[2026-03-31 19:49:19] 2026-03-31 17:48:16,148 | INFO     | sum of square deviations: 4340323240.0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,150 | INFO     | sum of deviations: -119204876117.0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,150 | INFO     | mean x (centered): 0.0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,150 | INFO     | mean y: 2646526.136929461
[2026-03-31 19:49:19] 2026-03-31 17:48:16,151 | INFO     | intersect: 2646526.136929461
[2026-03-31 19:49:19] 2026-03-31 17:48:16,151 | INFO     | chi2: 0.20980164459696635
[2026-03-31 19:49:19] 2026-03-31 17:48:16,151 | INFO     | current memory leak: -27.46 B/s (using 241 data points, chi2=0.21)
[2026-03-31 19:49:19] 2026-03-31 17:48:16,152 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-31 19:49:19] 2026-03-31 17:48:16,152 | INFO     | ..............................
[2026-03-31 19:49:19] 2026-03-31 17:48:16,152 | INFO     | . Timing measurements:
[2026-03-31 19:49:19] 2026-03-31 17:48:16,152 | INFO     | . get job = 0 s
[2026-03-31 19:49:19] 2026-03-31 17:48:16,152 | INFO     | . initial setup = 101 s
[2026-03-31 19:49:19] 2026-03-31 17:48:16,152 | INFO     | . payload setup = 167 s
[2026-03-31 19:49:19] 2026-03-31 17:48:16,153 | INFO     | . stage-in = 0 s
[2026-03-31 19:49:19] 2026-03-31 17:48:16,153 | INFO     | . payload execution = 16100 s
[2026-03-31 19:49:19] 2026-03-31 17:48:16,153 | INFO     | . stage-out = 3 s
[2026-03-31 19:49:19] 2026-03-31 17:48:16,153 | INFO     | . log creation = 1 s
[2026-03-31 19:49:19] 2026-03-31 17:48:16,153 | INFO     | ..............................
[2026-03-31 19:49:19] 2026-03-31 17:48:16,506 | INFO     | 
[2026-03-31 19:49:19] 2026-03-31 17:48:16,506 | INFO     | job summary report
[2026-03-31 19:49:19] 2026-03-31 17:48:16,506 | INFO     | --------------------------------------------------
[2026-03-31 19:49:19] 2026-03-31 17:48:16,506 | INFO     | PanDA job id: 7072726402
[2026-03-31 19:49:19] 2026-03-31 17:48:16,507 | INFO     | task id: 49263191
[2026-03-31 19:49:19] 2026-03-31 17:48:16,507 | INFO     | errors: (none)
[2026-03-31 19:49:19] 2026-03-31 17:48:16,507 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 19:49:19] 2026-03-31 17:48:16,507 | INFO     | pilot state: finished 
[2026-03-31 19:49:19] 2026-03-31 17:48:16,507 | INFO     | transexitcode: 0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,507 | INFO     | exeerrorcode: 0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,507 | INFO     | exeerrordiag: 
[2026-03-31 19:49:19] 2026-03-31 17:48:16,507 | INFO     | exitcode: 0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,507 | INFO     | exitmsg: OK
[2026-03-31 19:49:19] 2026-03-31 17:48:16,508 | INFO     | cpuconsumptiontime: 61323 s
[2026-03-31 19:49:19] 2026-03-31 17:48:16,508 | INFO     | nevents: 400
[2026-03-31 19:49:19] 2026-03-31 17:48:16,508 | INFO     | neventsw: 0
[2026-03-31 19:49:19] 2026-03-31 17:48:16,508 | INFO     | pid: 13732
[2026-03-31 19:49:19] 2026-03-31 17:48:16,508 | INFO     | pgrp: 13732
[2026-03-31 19:49:19] 2026-03-31 17:48:16,508 | INFO     | corecount: 8
[2026-03-31 19:49:19] 2026-03-31 17:48:16,508 | INFO     | event service: False
[2026-03-31 19:49:19] 2026-03-31 17:48:16,508 | INFO     | sizes: {0: 2279135, 1: 2280194, 2: 2281622, 12: 2281650, 16273: 2312927, 16277: 2321927, 16281: 2322139, 16283: 2322333}
[2026-03-31 19:49:19] 2026-03-31 17:48:16,508 | INFO     | --------------------------------------------------
[2026-03-31 19:49:19] 2026-03-31 17:48:16,509 | INFO     | 
[2026-03-31 19:49:19] 2026-03-31 17:48:16,509 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2026-03-31 19:49:19] 2026-03-31 17:48:16,861 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,861 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,861 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,861 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,862 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,862 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,862 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,862 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,862 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,862 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,862 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,862 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,863 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,863 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,863 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,863 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,863 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,863 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 19:49:19] 2026-03-31 17:48:16,863 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,863 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 19:49:19] 2026-03-31 17:48:16,864 | INFO     | job 7072726402 has completed (purged errors)
[2026-03-31 19:49:19] 2026-03-31 17:48:16,864 | INFO     | overall cleanup function is called
[2026-03-31 19:49:19] 2026-03-31 17:48:17,873 | INFO     | --- collectZombieJob: --- 10, [13732]
[2026-03-31 19:49:19] 2026-03-31 17:48:17,873 | INFO     | zombie collector waiting for pid 13732
[2026-03-31 19:49:19] 2026-03-31 17:48:17,873 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 19:49:19] 2026-03-31 17:48:17,873 | INFO     | collected zombie processes
[2026-03-31 19:49:19] 2026-03-31 17:48:17,874 | INFO     | will attempt to kill all subprocesses of pid=13732
[2026-03-31 19:49:19] 2026-03-31 17:48:17,986 | INFO     | process IDs to be killed: [13732] (in reverse order)
[2026-03-31 19:49:19] 2026-03-31 17:48:18,627 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 19:49:19] 2026-03-31 17:48:18,627 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 19:49:19] 2026-03-31 17:48:18,630 | INFO     | did not find any defunct processes belonging to 13732
[2026-03-31 19:49:19] 2026-03-31 17:48:18,634 | INFO     | did not find any defunct processes belonging to 13732
[2026-03-31 19:49:19] 2026-03-31 17:48:18,634 | INFO     | Ready for new job
[2026-03-31 19:49:19] 2026-03-31 17:48:18,636 | INFO     | **************************************
[2026-03-31 19:49:19] 2026-03-31 17:48:18,636 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 19:49:19] 2026-03-31 17:48:18,636 | INFO     | **************************************
[2026-03-31 19:49:19] 2026-03-31 17:48:18,636 | INFO     | 
[2026-03-31 19:49:19] 2026-03-31 17:48:18,637 | INFO     | pilot is running in a VM
[2026-03-31 19:49:19] 2026-03-31 17:48:18,637 | INFO     | architecture information:
[2026-03-31 19:49:19] 2026-03-31 17:48:18,646 | INFO     | executing command: cat /etc/os-release
[2026-03-31 19:49:19] 2026-03-31 17:48:18,912 | INFO     | cat /etc/os-release:
[2026-03-31 19:49:19] NAME="CentOS Linux"
[2026-03-31 19:49:19] VERSION="7 (Core)"
[2026-03-31 19:49:19] ID="centos"
[2026-03-31 19:49:19] ID_LIKE="rhel fedora"
[2026-03-31 19:49:19] VERSION_ID="7"
[2026-03-31 19:49:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 19:49:19] ANSI_COLOR="0;31"
[2026-03-31 19:49:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 19:49:19] HOME_URL="https://www.centos.org/"
[2026-03-31 19:49:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 19:49:19] 
[2026-03-31 19:49:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 19:49:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 19:49:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 19:49:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 19:49:19] 
[2026-03-31 19:49:19] 2026-03-31 17:48:18,912 | INFO     | **************************************
[2026-03-31 19:49:19] 2026-03-31 17:48:19,415 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2026-03-31 19:49:19] 2026-03-31 17:48:19,596 | INFO     | sufficient remaining disk space (496627613696 B)
[2026-03-31 19:49:19] 2026-03-31 17:48:19,596 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 19:49:19] 2026-03-31 17:48:19,596 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 19:49:19] 2026-03-31 17:48:19,596 | INFO     | update_server=False
[2026-03-31 19:49:19] 2026-03-31 17:48:19,596 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 19:49:19] 2026-03-31 17:48:19,598 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 19:49:19] 2026-03-31 17:48:19,829 | INFO     | all data control threads have been joined
[2026-03-31 19:49:19] 2026-03-31 17:48:19,879 | INFO     | all payload control threads have been joined
[2026-03-31 19:49:19] 2026-03-31 17:48:19,880 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-31 19:49:19] 2026-03-31 17:48:19,880 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-31 19:49:19] 2026-03-31 17:48:19,880 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 19:49:19] 2026-03-31 17:48:19,881 | INFO     | will abort loop
[2026-03-31 19:49:19] 2026-03-31 17:48:19,954 | INFO     | all job control threads have been joined
[2026-03-31 19:49:19] 2026-03-31 17:48:20,250 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 19:49:19] 2026-03-31 17:48:20,601 | INFO     | [job] retrieve thread has finished
[2026-03-31 19:49:19] 2026-03-31 17:48:20,719 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 19:49:19] 2026-03-31 17:48:20,835 | INFO     | [data] control thread has finished
[2026-03-31 19:49:19] 2026-03-31 17:48:20,885 | INFO     | [payload] control thread has finished
[2026-03-31 19:49:19] 2026-03-31 17:48:20,886 | INFO     | [job] job monitor thread has finished
[2026-03-31 19:49:19] 2026-03-31 17:48:20,960 | INFO     | [job] control thread has finished
[2026-03-31 19:49:19] 2026-03-31 17:48:21,003 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 19:49:19] 2026-03-31 17:48:21,073 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 19:49:19] 2026-03-31 17:48:21,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 19:49:19] 2026-03-31 17:48:21,346 | INFO     | [data] copytool_in thread has finished
[2026-03-31 19:49:19] 2026-03-31 17:48:21,493 | INFO     | [job] validate thread has finished
[2026-03-31 19:49:19] 2026-03-31 17:48:21,605 | INFO     | [data] copytool_out thread has finished
[2026-03-31 19:49:19] 2026-03-31 17:48:21,748 | INFO     | [payload] validate_post thread has finished
[2026-03-31 19:49:19] 2026-03-31 17:48:21,883 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 19:49:19] 2026-03-31 17:48:22,073 | INFO     | [payload] failed_post thread has finished
[2026-03-31 19:49:19] 2026-03-31 17:48:22,331 | INFO     | [job] queue monitor thread has finished
[2026-03-31 19:49:19] 2026-03-31 17:48:24,259 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 19:49:19] 2026-03-31 17:48:49,896 | INFO     | PID=9214 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-31 19:49:19] 2026-03-31 17:48:49,896 | INFO     | .. there are 9 such processes running
[2026-03-31 19:49:19] 2026-03-31 17:48:49,897 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 19:49:19] 2026-03-31 17:48:49,897 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 19:49:19] 2026-03-31 17:48:49,897 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 19:49:19] 2026-03-31 17:49:08,798 | INFO     | [monitor] cgroup control has ended
[2026-03-31 19:49:19] 2026-03-31 17:49:09,630 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140271932630848)>', '<ExcThread(monitor, started 140271417292544)>']
[2026-03-31 19:49:19] 2026-03-31 17:49:10,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 19:49:19] 2026-03-31 17:49:10,017 | INFO     | [monitor] control thread has ended
[2026-03-31 19:49:19] 2026-03-31 17:49:14,656 | INFO     | all workflow threads have been joined
[2026-03-31 19:49:19] 2026-03-31 17:49:14,656 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 19:49:19] 2026-03-31 17:49:14,656 | INFO     | traces error code: 0
[2026-03-31 19:49:19] 2026-03-31 17:49:14,657 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 19:49:19] 2026-03-31 17:49:14,911 [wrapper] ==== pilot stdout END ====
[2026-03-31 19:49:19] 2026-03-31 17:49:14,953 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 19:49:19] 2026-03-31 17:49:14,969 [wrapper] pilotpid: 9214
[2026-03-31 19:49:19] 2026-03-31 17:49:15,031 [wrapper] Pilot exit status: 0
[2026-03-31 19:49:19] 2026-03-31 17:49:15,418 [wrapper] pandaids: 7072726402
[2026-03-31 19:49:19] 2026-03-31 17:49:16,360 [wrapper] cleanup supervisor_pilot  5299 9215
[2026-03-31 19:49:19] 2026-03-31 17:49:16,438 [wrapper] Test setup, not cleaning
[2026-03-31 19:49:19] 2026-03-31 17:49:16,548 [wrapper] apfmon messages muted
[2026-03-31 19:49:19] 2026-03-31 17:49:16,624 [wrapper] ==== wrapper stdout END ====
[2026-03-31 19:49:19] 2026-03-31 17:49:16,726 [wrapper] ==== wrapper stderr END ====
[2026-03-31 19:49:19]  *** Error codes and diagnostics ***
[2026-03-31 19:49:19]     "exeErrorCode": 0,
[2026-03-31 19:49:19]     "pilotErrorCode": 0,
[2026-03-31 19:49:19]  *** Listing of results directory ***
[2026-03-31 19:49:19] total 416848
[2026-03-31 19:49:19] -rw-r--r--. 1 boinc boinc    644034 Mar 31 04:18 pilot3.tar.gz
[2026-03-31 19:49:19] -rw-r--r--. 1 boinc boinc      5118 Mar 31 04:18 queuedata.json
[2026-03-31 19:49:19] -rwx------. 1 boinc boinc     36322 Mar 31 04:18 runpilot2-wrapper.sh
[2026-03-31 19:49:19] -rw-r--r--. 1 boinc boinc       100 Mar 31 15:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 19:49:19] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 15:11 run_atlas
[2026-03-31 19:49:19] -rw-r--r--. 1 boinc boinc       105 Mar 31 15:11 job.xml
[2026-03-31 19:49:19] -rw-r--r--. 2 boinc boinc 222860592 Mar 31 15:11 EVNT.49263189._000286.pool.root.1
[2026-03-31 19:49:19] -rw-r--r--. 2 boinc boinc    656748 Mar 31 15:11 input.tar.gz
[2026-03-31 19:49:19] -rw-r--r--. 1 boinc boinc      6391 Mar 31 15:11 init_data.xml
[2026-03-31 19:49:19] -rw-r--r--. 2 boinc boinc     15845 Mar 31 15:11 start_atlas.sh
[2026-03-31 19:49:19] drwxrwx--x. 2 boinc boinc        68 Mar 31 15:11 shared
[2026-03-31 19:49:19] -rw-r--r--. 1 boinc boinc         0 Mar 31 15:11 boinc_lockfile
[2026-03-31 19:49:19] -rw-r--r--. 1 boinc boinc      2577 Mar 31 15:11 pandaJob.out
[2026-03-31 19:49:19] -rw-------. 1 boinc boinc       415 Mar 31 15:16 workernode_map.json
[2026-03-31 19:49:19] -rw-------. 1 boinc boinc   1003225 Mar 31 15:16 agis_schedconf.cvmfs.json
[2026-03-31 19:49:19] drwx------. 5 boinc boinc      4096 Mar 31 15:16 pilot3
[2026-03-31 19:49:19] -rw-------. 1 boinc boinc 196148959 Mar 31 19:46 HITS.49263191._012261.pool.root.1
[2026-03-31 19:49:19] -rw-r--r--. 1 boinc boinc       530 Mar 31 19:47 boinc_task_state.xml
[2026-03-31 19:49:19] -rw-------. 1 boinc boinc      1013 Mar 31 19:48 memory_monitor_summary.json
[2026-03-31 19:49:19] -rw-------. 1 boinc boinc   1511579 Mar 31 19:48 agis_ddmendpoints.agis.ALL.json
[2026-03-31 19:49:19] -rw-------. 1 boinc boinc        95 Mar 31 19:48 pilot_heartbeat.json
[2026-03-31 19:49:19] -rw-------. 1 boinc boinc    410198 Mar 31 19:48 log.49263191._012261.job.log.tgz.1
[2026-03-31 19:49:19] -rw-------. 1 boinc boinc      6343 Mar 31 19:48 heartbeat_new.json
[2026-03-31 19:49:19] -rw-------. 1 boinc boinc      6234 Mar 31 19:48 heartbeat.json
[2026-03-31 19:49:19] -rw-r--r--. 1 boinc boinc      8192 Mar 31 19:49 boinc_mmap_file
[2026-03-31 19:49:19] -rw-r--r--. 1 boinc boinc        28 Mar 31 19:49 wrapper_checkpoint.txt
[2026-03-31 19:49:19] -rw-------. 1 boinc boinc      5065 Mar 31 19:49 pilotlog.txt
[2026-03-31 19:49:19] -rw-------. 1 boinc boinc   1486494 Mar 31 19:49 log.49263191._012261.job.log.1
[2026-03-31 19:49:19] -rw-------. 1 boinc boinc       357 Mar 31 19:49 output.list
[2026-03-31 19:49:19] -rw-r--r--. 1 boinc boinc       620 Mar 31 19:49 runtime_log
[2026-03-31 19:49:19] -rw-------. 1 boinc boinc   1914880 Mar 31 19:49 result.tar.gz
[2026-03-31 19:49:19] -rw-------. 1 boinc boinc       655 Mar 31 19:49 ssvKDmSrdR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmldRKDmkhTjSo.diag
[2026-03-31 19:49:19] -rw-r--r--. 1 boinc boinc      8832 Mar 31 19:49 runtime_log.err
[2026-03-31 19:49:19] -rw-r--r--. 1 boinc boinc     20635 Mar 31 19:49 stderr.txt
[2026-03-31 19:49:19] HITS file was successfully produced:
[2026-03-31 19:49:19] -rw-------. 1 boinc boinc 196148959 Mar 31 19:46 shared/HITS.pool.root.1
[2026-03-31 19:49:19]  *** Contents of shared directory: ***
[2026-03-31 19:49:19] total 411724
[2026-03-31 19:49:19] -rw-r--r--. 2 boinc boinc 222860592 Mar 31 15:11 ATLAS.root_0
[2026-03-31 19:49:19] -rw-r--r--. 2 boinc boinc    656748 Mar 31 15:11 input.tar.gz
[2026-03-31 19:49:19] -rw-r--r--. 2 boinc boinc     15845 Mar 31 15:11 start_atlas.sh
[2026-03-31 19:49:19] -rw-------. 1 boinc boinc 196148959 Mar 31 19:46 HITS.pool.root.1
[2026-03-31 19:49:19] -rw-------. 1 boinc boinc   1914880 Mar 31 19:49 result.tar.gz
19:49:20 (5058): run_atlas exited; CPU time 61574.332850
19:49:20 (5058): called boinc_finish(0)

</stderr_txt>
]]>

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