Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:20:16 (207561): wrapper (7.7.26015): starting
03:20:16 (207561): wrapper: running run_atlas (--nthreads 4)
[2026-04-06 03:20:16] Arguments: --nthreads 4
[2026-04-06 03:20:16] Threads: 4
[2026-04-06 03:20:16] Checking for CVMFS
[2026-04-06 03:20:16] No cvmfs_config command found, will try listing directly
[2026-04-06 03:20:16] CVMFS is ok
[2026-04-06 03:20:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-06 03:20:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-06 03:20:16] Further information can be found at the LHC@home message board.
[2026-04-06 03:20:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-06 03:20:16] Checking for apptainer binary...
[2026-04-06 03:20:16] which: no apptainer in ((null))
[2026-04-06 03:20:16] apptainer is not installed, using version from CVMFS
[2026-04-06 03:20:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-06 03:20:16] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-04-06 03:20:16] apptainer works
[2026-04-06 03:20:16] Set ATHENA_PROC_NUMBER=4
[2026-04-06 03:20:16] Set ATHENA_CORE_NUMBER=4
[2026-04-06 03:20:16] Starting ATLAS job with PandaID=7072605499
[2026-04-06 03:20:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-06 04:49:42]  *** The last 200 lines of the pilot log: ***
[2026-04-06 04:49:42]  filesize=253597
[2026-04-06 04:49:42]  filetype=log
[2026-04-06 04:49:42]  guid=ead6b23d-c04c-46e4-8a9d-a58dd8b07dbd
[2026-04-06 04:49:42]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-06 04:49:42]  is_altstaged=None
[2026-04-06 04:49:42]  is_tar=False
[2026-04-06 04:49:42]  lfn=log.49263191._010889.job.log.tgz.1
[2026-04-06 04:49:42]  mtime=0
[2026-04-06 04:49:42]  protocol_id=None
[2026-04-06 04:49:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-06 04:49:42]  replicas=None
[2026-04-06 04:49:42]  scope=mc23_13p6TeV
[2026-04-06 04:49:42]  status=None
[2026-04-06 04:49:42]  status_code=0
[2026-04-06 04:49:42]  storage_token=
[2026-04-06 04:49:42]  surl=/var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7072605499/log.49263191._010889.job.log.tgz.1
[2026-04-06 04:49:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/41/log.49263191._010889.job.log.tgz.1
[2026-04-06 04:49:42]  workdir=None
[2026-04-06 04:49:42] ]
[2026-04-06 04:49:42] 2026-04-06 02:48:57,467 | INFO     | transferring file log.49263191._010889.job.log.tgz.1 from /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7072605499/log.49263191._010889.job.log.tgz.1 to /var/lib/b
[2026-04-06 04:49:42] 2026-04-06 02:48:57,468 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7072605499/log.49263191._010889.job.log.tgz.1 /var/lib/boinc/var/slot44/slots/7/lo
[2026-04-06 04:49:42] 2026-04-06 02:48:57,486 | INFO     | adding to output.list: log.49263191._010889.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/41/log.49263191._010889.job.log.tg
[2026-04-06 04:49:42] 2026-04-06 02:48:57,487 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-06 04:49:42] 2026-04-06 02:48:57,487 | INFO     | summary of transferred files:
[2026-04-06 04:49:42] 2026-04-06 02:48:57,487 | INFO     |  -- lfn=log.49263191._010889.job.log.tgz.1, status_code=0, status=transferred
[2026-04-06 04:49:42] 2026-04-06 02:48:57,487 | INFO     | stage-out finished correctly
[2026-04-06 04:49:42] 2026-04-06 02:48:57,541 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-06 04:49:42] 2026-04-06 02:48:59,372 | INFO     | job 7072605499 has state=finished
[2026-04-06 04:49:42] 2026-04-06 02:48:59,373 | INFO     | preparing for final server update for job 7072605499 in state='finished'
[2026-04-06 04:49:42] 2026-04-06 02:48:59,373 | INFO     | reading metadata from: /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7072605499/jobReport.json
[2026-04-06 04:49:42] 2026-04-06 02:48:59,374 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot44/slots/7/workernode_map.json
[2026-04-06 04:49:42] 2026-04-06 02:48:59,375 | INFO     | this job has now completed (state=finished)
[2026-04-06 04:49:42] 2026-04-06 02:48:59,375 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-06 04:49:42] 2026-04-06 02:48:59,375 | INFO     | log transfer has been attempted: DONE
[2026-04-06 04:49:42] 2026-04-06 02:48:59,375 | INFO     | job 7072605499 has finished - writing final server update
[2026-04-06 04:49:42] 2026-04-06 02:48:59,375 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3812366/.job.ad'
[2026-04-06 04:49:42] 2026-04-06 02:48:59,375 | INFO     | total number of processed events: 400 (read)
[2026-04-06 04:49:42] 2026-04-06 02:48:59,392 | INFO     | using path: /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7072605499/memory_monitor_summary.json (trf name=prmon)
[2026-04-06 04:49:42] 2026-04-06 02:48:59,393 | INFO     | extracted standard info from prmon json
[2026-04-06 04:49:42] 2026-04-06 02:48:59,393 | INFO     | extracted standard memory fields from prmon json
[2026-04-06 04:49:42] 2026-04-06 02:48:59,393 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-06 04:49:42] 2026-04-06 02:48:59,393 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-06 04:49:42] 2026-04-06 02:48:59,394 | INFO     | fitting pss+swap vs Time
[2026-04-06 04:49:42] 2026-04-06 02:48:59,394 | INFO     | sum of square deviations: 158737860.0
[2026-04-06 04:49:42] 2026-04-06 02:48:59,394 | INFO     | sum of deviations: -20225744593.5
[2026-04-06 04:49:42] 2026-04-06 02:48:59,394 | INFO     | mean x (centered): 0.0
[2026-04-06 04:49:42] 2026-04-06 02:48:59,395 | INFO     | mean y: 2592728.1125
[2026-04-06 04:49:42] 2026-04-06 02:48:59,395 | INFO     | intersect: 2592728.1125
[2026-04-06 04:49:42] 2026-04-06 02:48:59,395 | INFO     | chi2: 0.15207311797063247
[2026-04-06 04:49:42] 2026-04-06 02:48:59,395 | INFO     | current memory leak: -127.42 B/s (using 80 data points, chi2=0.15)
[2026-04-06 04:49:42] 2026-04-06 02:48:59,395 | INFO     | could have reported an average CPU frequency of 2770 MHz (6 samples)
[2026-04-06 04:49:42] 2026-04-06 02:48:59,395 | INFO     | ..............................
[2026-04-06 04:49:42] 2026-04-06 02:48:59,395 | INFO     | . Timing measurements:
[2026-04-06 04:49:42] 2026-04-06 02:48:59,395 | INFO     | . get job = 0 s
[2026-04-06 04:49:42] 2026-04-06 02:48:59,395 | INFO     | . initial setup = 4 s
[2026-04-06 04:49:42] 2026-04-06 02:48:59,395 | INFO     | . payload setup = 8 s
[2026-04-06 04:49:42] 2026-04-06 02:48:59,395 | INFO     | . stage-in = 0 s
[2026-04-06 04:49:42] 2026-04-06 02:48:59,396 | INFO     | . payload execution = 5284 s
[2026-04-06 04:49:42] 2026-04-06 02:48:59,396 | INFO     | . stage-out = 0 s
[2026-04-06 04:49:42] 2026-04-06 02:48:59,396 | INFO     | . log creation = 0 s
[2026-04-06 04:49:42] 2026-04-06 02:48:59,396 | INFO     | ..............................
[2026-04-06 04:49:42] 2026-04-06 02:48:59,450 | INFO     | 
[2026-04-06 04:49:42] 2026-04-06 02:48:59,451 | INFO     | job summary report
[2026-04-06 04:49:42] 2026-04-06 02:48:59,451 | INFO     | --------------------------------------------------
[2026-04-06 04:49:42] 2026-04-06 02:48:59,451 | INFO     | PanDA job id: 7072605499
[2026-04-06 04:49:42] 2026-04-06 02:48:59,451 | INFO     | task id: 49263191
[2026-04-06 04:49:42] 2026-04-06 02:48:59,451 | INFO     | errors: (none)
[2026-04-06 04:49:42] 2026-04-06 02:48:59,451 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-06 04:49:42] 2026-04-06 02:48:59,451 | INFO     | pilot state: finished 
[2026-04-06 04:49:42] 2026-04-06 02:48:59,451 | INFO     | transexitcode: 0
[2026-04-06 04:49:42] 2026-04-06 02:48:59,451 | INFO     | exeerrorcode: 0
[2026-04-06 04:49:42] 2026-04-06 02:48:59,451 | INFO     | exeerrordiag: 
[2026-04-06 04:49:42] 2026-04-06 02:48:59,451 | INFO     | exitcode: 0
[2026-04-06 04:49:42] 2026-04-06 02:48:59,451 | INFO     | exitmsg: OK
[2026-04-06 04:49:42] 2026-04-06 02:48:59,451 | INFO     | cpuconsumptiontime: 20307 s
[2026-04-06 04:49:42] 2026-04-06 02:48:59,451 | INFO     | nevents: 400
[2026-04-06 04:49:42] 2026-04-06 02:48:59,451 | INFO     | neventsw: 0
[2026-04-06 04:49:42] 2026-04-06 02:48:59,451 | INFO     | pid: 217118
[2026-04-06 04:49:42] 2026-04-06 02:48:59,452 | INFO     | pgrp: 217118
[2026-04-06 04:49:42] 2026-04-06 02:48:59,452 | INFO     | corecount: 4
[2026-04-06 04:49:42] 2026-04-06 02:48:59,452 | INFO     | event service: False
[2026-04-06 04:49:42] 2026-04-06 02:48:59,452 | INFO     | sizes: {0: 2281604, 11: 2281604, 5296: 2308126, 5297: 2317202, 5298: 2317340}
[2026-04-06 04:49:42] 2026-04-06 02:48:59,452 | INFO     | --------------------------------------------------
[2026-04-06 04:49:42] 2026-04-06 02:48:59,452 | INFO     | 
[2026-04-06 04:49:42] 2026-04-06 02:48:59,452 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/7
[2026-04-06 04:49:42] 2026-04-06 02:48:59,477 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,477 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,477 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,477 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,477 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,477 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,477 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,477 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,477 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,478 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,478 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,478 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,478 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,478 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,478 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,478 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,478 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,478 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-06 04:49:42] 2026-04-06 02:48:59,478 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,478 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-06 04:49:42] 2026-04-06 02:48:59,478 | INFO     | job 7072605499 has completed (purged errors)
[2026-04-06 04:49:42] 2026-04-06 02:48:59,478 | INFO     | overall cleanup function is called
[2026-04-06 04:49:42] 2026-04-06 02:48:59,674 | WARNING  | process 217118 can no longer be monitored (due to stat problems) - aborting
[2026-04-06 04:49:42] 2026-04-06 02:48:59,936 | INFO     | using path: /var/lib/boinc/var/slot44/slots/7/memory_monitor_summary.json (trf name=prmon)
[2026-04-06 04:49:42] 2026-04-06 02:49:00,274 | INFO     | number of running child processes to parent process 217118: 1
[2026-04-06 04:49:42] 2026-04-06 02:49:00,274 | INFO     | maximum number of monitored processes: 6
[2026-04-06 04:49:42] 2026-04-06 02:49:00,274 | INFO     | aborting job monitoring since job object (job id=7072605499) has expired
[2026-04-06 04:49:42] 2026-04-06 02:49:00,486 | INFO     | --- collectZombieJob: --- 10, [217118]
[2026-04-06 04:49:42] 2026-04-06 02:49:00,486 | INFO     | zombie collector waiting for pid 217118
[2026-04-06 04:49:42] 2026-04-06 02:49:00,487 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-06 04:49:42] 2026-04-06 02:49:00,487 | INFO     | collected zombie processes
[2026-04-06 04:49:42] 2026-04-06 02:49:00,487 | INFO     | will attempt to kill all subprocesses of pid=217118
[2026-04-06 04:49:42] 2026-04-06 02:49:00,817 | INFO     | process IDs to be killed: [217118] (in reverse order)
[2026-04-06 04:49:42] 2026-04-06 02:49:00,951 | WARNING  | found no corresponding commands to process id(s)
[2026-04-06 04:49:42] 2026-04-06 02:49:00,952 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-06 04:49:42] 2026-04-06 02:49:00,971 | INFO     | did not find any defunct processes belonging to 217118
[2026-04-06 04:49:42] 2026-04-06 02:49:00,984 | INFO     | did not find any defunct processes belonging to 217118
[2026-04-06 04:49:42] 2026-04-06 02:49:00,984 | INFO     | Ready for new job
[2026-04-06 04:49:42] 2026-04-06 02:49:00,985 | INFO     | **************************************
[2026-04-06 04:49:42] 2026-04-06 02:49:00,985 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-06 04:49:42] 2026-04-06 02:49:00,985 | INFO     | **************************************
[2026-04-06 04:49:42] 2026-04-06 02:49:00,985 | INFO     | 
[2026-04-06 04:49:42] 2026-04-06 02:49:00,990 | INFO     | architecture information:
[2026-04-06 04:49:42] 2026-04-06 02:49:00,990 | INFO     | executing command: cat /etc/os-release
[2026-04-06 04:49:42] 2026-04-06 02:49:01,005 | INFO     | cat /etc/os-release:
[2026-04-06 04:49:42] NAME="CentOS Linux"
[2026-04-06 04:49:42] VERSION="7 (Core)"
[2026-04-06 04:49:42] ID="centos"
[2026-04-06 04:49:42] ID_LIKE="rhel fedora"
[2026-04-06 04:49:42] VERSION_ID="7"
[2026-04-06 04:49:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-06 04:49:42] ANSI_COLOR="0;31"
[2026-04-06 04:49:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-06 04:49:42] HOME_URL="https://www.centos.org/"
[2026-04-06 04:49:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-06 04:49:42] 
[2026-04-06 04:49:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-06 04:49:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-06 04:49:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-06 04:49:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-06 04:49:42] 
[2026-04-06 04:49:42] 2026-04-06 02:49:01,005 | INFO     | **************************************
[2026-04-06 04:49:42] 2026-04-06 02:49:01,508 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/7
[2026-04-06 04:49:42] 2026-04-06 02:49:01,526 | INFO     | sufficient remaining disk space (333872889856 B)
[2026-04-06 04:49:42] 2026-04-06 02:49:01,527 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-06 04:49:42] 2026-04-06 02:49:01,527 | INFO     | current server update state: UPDATING_FINAL
[2026-04-06 04:49:42] 2026-04-06 02:49:01,527 | INFO     | update_server=False
[2026-04-06 04:49:42] 2026-04-06 02:49:01,527 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-06 04:49:42] 2026-04-06 02:49:01,527 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-06 04:49:42] 2026-04-06 02:49:01,527 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-06 04:49:42] 2026-04-06 02:49:01,528 | INFO     | aborting loop
[2026-04-06 04:49:42] 2026-04-06 02:49:02,253 | INFO     | all job control threads have been joined
[2026-04-06 04:49:42] 2026-04-06 02:49:02,458 | INFO     | all data control threads have been joined
[2026-04-06 04:49:42] 2026-04-06 02:49:02,532 | INFO     | [job] retrieve thread has finished
[2026-04-06 04:49:42] 2026-04-06 02:49:02,533 | INFO     | [job] job monitor thread has finished
[2026-04-06 04:49:42] 2026-04-06 02:49:02,764 | INFO     | all payload control threads have been joined
[2026-04-06 04:49:42] 2026-04-06 02:49:02,842 | INFO     | [payload] validate_post thread has finished
[2026-04-06 04:49:42] 2026-04-06 02:49:03,222 | INFO     | [job] create_data_payload thread has finished
[2026-04-06 04:49:42] 2026-04-06 02:49:03,259 | INFO     | [job] control thread has finished
[2026-04-06 04:49:42] 2026-04-06 02:49:03,314 | INFO     | [job] validate thread has finished
[2026-04-06 04:49:42] 2026-04-06 02:49:03,339 | INFO     | [payload] validate_pre thread has finished
[2026-04-06 04:49:42] 2026-04-06 02:49:03,463 | INFO     | [data] control thread has finished
[2026-04-06 04:49:42] 2026-04-06 02:49:03,479 | INFO     | [payload] failed_post thread has finished
[2026-04-06 04:49:42] 2026-04-06 02:49:03,520 | INFO     | [data] copytool_in thread has finished
[2026-04-06 04:49:42] 2026-04-06 02:49:03,533 | INFO     | [data] copytool_out thread has finished
[2026-04-06 04:49:42] 2026-04-06 02:49:03,602 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-06 04:49:42] 2026-04-06 02:49:03,769 | INFO     | [payload] control thread has finished
[2026-04-06 04:49:42] 2026-04-06 02:49:03,986 | INFO     | [payload] execute_payloads thread has finished
[2026-04-06 04:49:42] 2026-04-06 02:49:04,461 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-06 04:49:42] 2026-04-06 02:49:05,466 | INFO     | [job] queue monitor thread has finished
[2026-04-06 04:49:42] 2026-04-06 02:49:07,608 | INFO     | [data] queue_monitor thread has finished
[2026-04-06 04:49:42] 2026-04-06 02:49:11,981 | INFO     | job.realtimelogging is not enabled
[2026-04-06 04:49:42] 2026-04-06 02:49:12,986 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-06 04:49:42] 2026-04-06 02:49:32,650 | INFO     | PID=211912 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-06 04:49:42] 2026-04-06 02:49:32,652 | INFO     | found 0 job(s) in 20 queues
[2026-04-06 04:49:42] 2026-04-06 02:49:32,652 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-06 04:49:42] 2026-04-06 02:49:32,652 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-06 04:49:42] 2026-04-06 02:49:36,518 | INFO     | [monitor] cgroup control has ended
[2026-04-06 04:49:42] 2026-04-06 02:49:36,743 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22845190981440)>', '<ExcThread(monitor, started 22844944938752)>']
[2026-04-06 04:49:42] 2026-04-06 02:49:37,677 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-06 04:49:42] 2026-04-06 02:49:37,678 | INFO     | [monitor] control thread has ended
[2026-04-06 04:49:42] 2026-04-06 02:49:41,767 | INFO     | all workflow threads have been joined
[2026-04-06 04:49:42] 2026-04-06 02:49:41,767 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-06 04:49:42] 2026-04-06 02:49:41,767 | INFO     | traces error code: 0
[2026-04-06 04:49:42] 2026-04-06 02:49:41,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-06 04:49:42] 2026-04-06 02:49:41,855 [wrapper] ==== pilot stdout END ====
[2026-04-06 04:49:42] 2026-04-06 02:49:41,857 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-06 04:49:42] 2026-04-06 02:49:41,859 [wrapper] pilotpid: 211912
[2026-04-06 04:49:42] 2026-04-06 02:49:41,861 [wrapper] Pilot exit status: 0
[2026-04-06 04:49:42] 2026-04-06 02:49:41,870 [wrapper] pandaids: 7072605499
[2026-04-06 04:49:42] 2026-04-06 02:49:41,967 [wrapper] cleanup supervisor_pilot  307655 211913
[2026-04-06 04:49:42] 2026-04-06 02:49:41,970 [wrapper] Test setup, not cleaning
[2026-04-06 04:49:42] 2026-04-06 02:49:41,973 [wrapper] apfmon messages muted
[2026-04-06 04:49:42] 2026-04-06 02:49:41,976 [wrapper] ==== wrapper stdout END ====
[2026-04-06 04:49:42] 2026-04-06 02:49:41,979 [wrapper] ==== wrapper stderr END ====
[2026-04-06 04:49:42]  *** Error codes and diagnostics ***
[2026-04-06 04:49:42]     "exeErrorCode": 0,
[2026-04-06 04:49:42]     "pilotErrorCode": 0,
[2026-04-06 04:49:42]  *** Listing of results directory ***
[2026-04-06 04:49:42] total 415720
[2026-04-06 04:49:42] -rw-r--r--. 1 boinc boinc      5118 Mar 31 03:06 queuedata.json
[2026-04-06 04:49:42] -rw-r--r--. 1 boinc boinc    644034 Mar 31 03:06 pilot3.tar.gz
[2026-04-06 04:49:42] -rwx------. 1 boinc boinc     36322 Mar 31 03:07 runpilot2-wrapper.sh
[2026-04-06 04:49:42] -rw-r--r--. 1 boinc boinc       100 Apr  6 03:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-06 04:49:42] -rwxr-xr-x. 1 boinc boinc      7986 Apr  6 03:20 run_atlas
[2026-04-06 04:49:42] -rw-r--r--. 1 boinc boinc       105 Apr  6 03:20 job.xml
[2026-04-06 04:49:42] -rw-r--r--. 1 boinc boinc      6623 Apr  6 03:20 init_data.xml
[2026-04-06 04:49:42] -rw-r--r--. 2 boinc boinc 223344815 Apr  6 03:20 EVNT.49263189._000461.pool.root.1
[2026-04-06 04:49:42] -rw-r--r--. 2 boinc boinc     15845 Apr  6 03:20 start_atlas.sh
[2026-04-06 04:49:42] drwxrwx--x. 2 boinc boinc      4096 Apr  6 03:20 shared
[2026-04-06 04:49:42] -rw-r--r--. 2 boinc boinc    656754 Apr  6 03:20 input.tar.gz
[2026-04-06 04:49:42] -rw-r--r--. 1 boinc boinc         0 Apr  6 03:20 boinc_lockfile
[2026-04-06 04:49:42] -rw-r--r--. 1 boinc boinc      2577 Apr  6 03:20 pandaJob.out
[2026-04-06 04:49:42] -rw-------. 1 boinc boinc   1005404 Apr  6 03:20 agis_schedconf.cvmfs.json
[2026-04-06 04:49:42] -rw-------. 1 boinc boinc   1511579 Apr  6 03:20 agis_ddmendpoints.agis.ALL.json
[2026-04-06 04:49:42] -rw-------. 1 boinc boinc       443 Apr  6 03:20 workernode_map.json
[2026-04-06 04:49:42] drwx------. 5 boinc boinc      4096 Apr  6 03:20 pilot3
[2026-04-06 04:49:42] -rw-------. 1 boinc boinc 196764368 Apr  6 04:48 HITS.49263191._010889.pool.root.1
[2026-04-06 04:49:42] -rw-r--r--. 1 boinc boinc       529 Apr  6 04:48 boinc_task_state.xml
[2026-04-06 04:49:42] -rw-------. 1 boinc boinc      1026 Apr  6 04:48 memory_monitor_summary.json
[2026-04-06 04:49:42] -rw-------. 1 boinc boinc    253597 Apr  6 04:48 log.49263191._010889.job.log.tgz.1
[2026-04-06 04:49:42] -rw-------. 1 boinc boinc      6376 Apr  6 04:48 heartbeat_new.json
[2026-04-06 04:49:42] -rw-------. 1 boinc boinc      6267 Apr  6 04:48 heartbeat.json
[2026-04-06 04:49:42] -rw-r--r--. 1 boinc boinc      8192 Apr  6 04:49 boinc_mmap_file
[2026-04-06 04:49:42] -rw-r--r--. 1 boinc boinc        27 Apr  6 04:49 wrapper_checkpoint.txt
[2026-04-06 04:49:42] -rw-------. 1 boinc boinc        95 Apr  6 04:49 pilot_heartbeat.json
[2026-04-06 04:49:42] -rw-------. 1 boinc boinc      4824 Apr  6 04:49 pilotlog.txt
[2026-04-06 04:49:42] -rw-------. 1 boinc boinc    504790 Apr  6 04:49 log.49263191._010889.job.log.1
[2026-04-06 04:49:42] -rw-------. 1 boinc boinc       357 Apr  6 04:49 output.list
[2026-04-06 04:49:42] -rw-r--r--. 1 boinc boinc       620 Apr  6 04:49 runtime_log
[2026-04-06 04:49:42] -rw-------. 1 boinc boinc    778240 Apr  6 04:49 result.tar.gz
[2026-04-06 04:49:42] -rw-r--r--. 1 boinc boinc      9204 Apr  6 04:49 runtime_log.err
[2026-04-06 04:49:42] -rw-------. 1 boinc boinc       661 Apr  6 04:49 RfWMDmhkcR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmSRPKDmK23Dkm.diag
[2026-04-06 04:49:42] -rw-r--r--. 1 boinc boinc     20995 Apr  6 04:49 stderr.txt
[2026-04-06 04:49:42] HITS file was successfully produced:
[2026-04-06 04:49:42] -rw-------. 1 boinc boinc 196764368 Apr  6 04:48 shared/HITS.pool.root.1
[2026-04-06 04:49:42]  *** Contents of shared directory: ***
[2026-04-06 04:49:42] total 411696
[2026-04-06 04:49:42] -rw-r--r--. 2 boinc boinc 223344815 Apr  6 03:20 ATLAS.root_0
[2026-04-06 04:49:42] -rw-r--r--. 2 boinc boinc     15845 Apr  6 03:20 start_atlas.sh
[2026-04-06 04:49:42] -rw-r--r--. 2 boinc boinc    656754 Apr  6 03:20 input.tar.gz
[2026-04-06 04:49:42] -rw-------. 1 boinc boinc 196764368 Apr  6 04:48 HITS.pool.root.1
[2026-04-06 04:49:42] -rw-------. 1 boinc boinc    778240 Apr  6 04:49 result.tar.gz
04:49:43 (207561): run_atlas exited; CPU time 20459.856117
04:49:43 (207561): called boinc_finish(0)

</stderr_txt>
]]>

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