Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:58:56 (24721): wrapper (7.7.26015): starting
22:58:56 (24721): wrapper: running run_atlas (--nthreads 12)
[2026-03-30 22:58:56] Arguments: --nthreads 12
[2026-03-30 22:58:56] Threads: 12
[2026-03-30 22:58:56] Checking for CVMFS
[2026-03-30 22:58:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 22:58:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 22:58:56] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 22:58:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 22:58:57] 2.11.2.0 2937 467112 98440 157904 1 52 16401638 20275200 1 130560 1 200813767 99.954 26812084 17571 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-30 22:58:57] CVMFS is ok
[2026-03-30 22:58:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 22:58:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 22:58:57] Further information can be found at the LHC@home message board.
[2026-03-30 22:58:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 22:58:57] Checking for apptainer binary...
[2026-03-30 22:58:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 22:58:57] Running /usr/bin/apptainer --version
[2026-03-30 22:58:57] apptainer version 1.3.2-1.el7
[2026-03-30 22:58:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 22:58:58] c-205-8.aglt2.org
[2026-03-30 22:58:58] apptainer works
[2026-03-30 22:58:58] Set ATHENA_PROC_NUMBER=12
[2026-03-30 22:58:58] Set ATHENA_CORE_NUMBER=12
[2026-03-30 22:58:58] Starting ATLAS job with PandaID=7072602839
[2026-03-30 22:58:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 00:12:54]  *** The last 200 lines of the pilot log: ***
[2026-03-31 00:12:54]  filetype=log
[2026-03-31 00:12:54]  guid=9b99fdec-e72b-450e-a65b-aaf422b49c10
[2026-03-31 00:12:54]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-31 00:12:54]  is_altstaged=None
[2026-03-31 00:12:54]  is_tar=False
[2026-03-31 00:12:54]  lfn=log.49263191._009700.job.log.tgz.1
[2026-03-31 00:12:54]  mtime=0
[2026-03-31 00:12:54]  protocol_id=None
[2026-03-31 00:12:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-31 00:12:54]  replicas=None
[2026-03-31 00:12:54]  scope=mc23_13p6TeV
[2026-03-31 00:12:54]  status=None
[2026-03-31 00:12:54]  status_code=0
[2026-03-31 00:12:54]  storage_token=
[2026-03-31 00:12:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7072602839/log.49263191._009700.job.log.tgz.1
[2026-03-31 00:12:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/23/log.49263191._009700.job.log.tgz.1
[2026-03-31 00:12:54]  workdir=None
[2026-03-31 00:12:54] ]
[2026-03-31 00:12:54] 2026-03-31 04:12:18,107 | INFO     | transferring file log.49263191._009700.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7072602839/log.49263191._009700.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-31 00:12:54] 2026-03-31 04:12:18,108 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7072602839/log.49263191._009700.job.log.tgz.1 /tmp/boinchome/slots/0/log.49263191._009700.job
[2026-03-31 00:12:54] 2026-03-31 04:12:18,129 | INFO     | adding to output.list: log.49263191._009700.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/23/log.49263191._009700.job.log.tg
[2026-03-31 00:12:54] 2026-03-31 04:12:18,130 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-31 00:12:54] 2026-03-31 04:12:18,131 | INFO     | summary of transferred files:
[2026-03-31 00:12:54] 2026-03-31 04:12:18,131 | INFO     |  -- lfn=log.49263191._009700.job.log.tgz.1, status_code=0, status=transferred
[2026-03-31 00:12:54] 2026-03-31 04:12:18,131 | INFO     | stage-out finished correctly
[2026-03-31 00:12:54] 2026-03-31 04:12:18,295 | WARNING  | process 680 can no longer be monitored (due to stat problems) - aborting
[2026-03-31 00:12:54] 2026-03-31 04:12:18,295 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7072602839/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 00:12:54] 2026-03-31 04:12:18,382 | INFO     | number of running child processes to parent process 680: 1
[2026-03-31 00:12:54] 2026-03-31 04:12:18,382 | INFO     | maximum number of monitored processes: 6
[2026-03-31 00:12:54] 2026-03-31 04:12:18,568 | INFO     | 4386s have passed since pilot start - server update state is 'RUNNING'
[2026-03-31 00:12:54] 2026-03-31 04:12:20,865 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-31 00:12:54] 2026-03-31 04:12:20,891 | INFO     | monitor loop #334: job 0:7072602839 is in state 'finished'
[2026-03-31 00:12:54] 2026-03-31 04:12:20,891 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-31 00:12:54] 2026-03-31 04:12:21,816 | INFO     | job 7072602839 has state=finished
[2026-03-31 00:12:54] 2026-03-31 04:12:21,817 | INFO     | preparing for final server update for job 7072602839 in state='finished'
[2026-03-31 00:12:54] 2026-03-31 04:12:21,817 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7072602839/jobReport.json
[2026-03-31 00:12:54] 2026-03-31 04:12:21,820 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-31 00:12:54] 2026-03-31 04:12:21,820 | INFO     | this job has now completed (state=finished)
[2026-03-31 00:12:54] 2026-03-31 04:12:21,820 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 00:12:54] 2026-03-31 04:12:21,820 | INFO     | log transfer has been attempted: DONE
[2026-03-31 00:12:54] 2026-03-31 04:12:21,820 | INFO     | job 7072602839 has finished - writing final server update
[2026-03-31 00:12:54] 2026-03-31 04:12:21,821 | INFO     | total number of processed events: 400 (read)
[2026-03-31 00:12:54] 2026-03-31 04:12:21,822 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7072602839/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 00:12:54] 2026-03-31 04:12:21,823 | INFO     | extracted standard info from prmon json
[2026-03-31 00:12:54] 2026-03-31 04:12:21,823 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 00:12:54] 2026-03-31 04:12:21,823 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 00:12:54] 2026-03-31 04:12:21,823 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 00:12:54] 2026-03-31 04:12:21,825 | INFO     | fitting pss+swap vs Time
[2026-03-31 00:12:54] 2026-03-31 04:12:21,825 | INFO     | sum of square deviations: 85136480.0
[2026-03-31 00:12:54] 2026-03-31 04:12:21,825 | INFO     | sum of deviations: -58742267.999999985
[2026-03-31 00:12:54] 2026-03-31 04:12:21,825 | INFO     | mean x (centered): 0.0
[2026-03-31 00:12:54] 2026-03-31 04:12:21,825 | INFO     | mean y: 2679007.3384615383
[2026-03-31 00:12:54] 2026-03-31 04:12:21,826 | INFO     | intersect: 2679007.3384615383
[2026-03-31 00:12:54] 2026-03-31 04:12:21,826 | INFO     | chi2: 0.06684962326340486
[2026-03-31 00:12:54] 2026-03-31 04:12:21,826 | INFO     | current memory leak: -0.69 B/s (using 65 data points, chi2=0.07)
[2026-03-31 00:12:54] 2026-03-31 04:12:21,826 | INFO     | could have reported an average CPU frequency of 1773 MHz (6 samples)
[2026-03-31 00:12:54] 2026-03-31 04:12:21,826 | INFO     | ..............................
[2026-03-31 00:12:54] 2026-03-31 04:12:21,826 | INFO     | . Timing measurements:
[2026-03-31 00:12:54] 2026-03-31 04:12:21,826 | INFO     | . get job = 0 s
[2026-03-31 00:12:54] 2026-03-31 04:12:21,827 | INFO     | . initial setup = 7 s
[2026-03-31 00:12:54] 2026-03-31 04:12:21,827 | INFO     | . payload setup = 10 s
[2026-03-31 00:12:54] 2026-03-31 04:12:21,827 | INFO     | . stage-in = 0 s
[2026-03-31 00:12:54] 2026-03-31 04:12:21,827 | INFO     | . payload execution = 4351 s
[2026-03-31 00:12:54] 2026-03-31 04:12:21,827 | INFO     | . stage-out = 0 s
[2026-03-31 00:12:54] 2026-03-31 04:12:21,827 | INFO     | . log creation = 0 s
[2026-03-31 00:12:54] 2026-03-31 04:12:21,827 | INFO     | ..............................
[2026-03-31 00:12:54] 2026-03-31 04:12:21,907 | INFO     | 
[2026-03-31 00:12:54] 2026-03-31 04:12:21,907 | INFO     | job summary report
[2026-03-31 00:12:54] 2026-03-31 04:12:21,907 | INFO     | --------------------------------------------------
[2026-03-31 00:12:54] 2026-03-31 04:12:21,907 | INFO     | PanDA job id: 7072602839
[2026-03-31 00:12:54] 2026-03-31 04:12:21,908 | INFO     | task id: 49263191
[2026-03-31 00:12:54] 2026-03-31 04:12:21,908 | INFO     | errors: (none)
[2026-03-31 00:12:54] 2026-03-31 04:12:21,908 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 00:12:54] 2026-03-31 04:12:21,908 | INFO     | pilot state: finished 
[2026-03-31 00:12:54] 2026-03-31 04:12:21,908 | INFO     | transexitcode: 0
[2026-03-31 00:12:54] 2026-03-31 04:12:21,908 | INFO     | exeerrorcode: 0
[2026-03-31 00:12:54] 2026-03-31 04:12:21,908 | INFO     | exeerrordiag: 
[2026-03-31 00:12:54] 2026-03-31 04:12:21,908 | INFO     | exitcode: 0
[2026-03-31 00:12:54] 2026-03-31 04:12:21,908 | INFO     | exitmsg: OK
[2026-03-31 00:12:54] 2026-03-31 04:12:21,909 | INFO     | cpuconsumptiontime: 45145 s
[2026-03-31 00:12:54] 2026-03-31 04:12:21,909 | INFO     | nevents: 400
[2026-03-31 00:12:54] 2026-03-31 04:12:21,909 | INFO     | neventsw: 0
[2026-03-31 00:12:54] 2026-03-31 04:12:21,909 | INFO     | pid: 680
[2026-03-31 00:12:54] 2026-03-31 04:12:21,909 | INFO     | pgrp: 680
[2026-03-31 00:12:54] 2026-03-31 04:12:21,909 | INFO     | corecount: 12
[2026-03-31 00:12:54] 2026-03-31 04:12:21,909 | INFO     | event service: False
[2026-03-31 00:12:54] 2026-03-31 04:12:21,909 | INFO     | sizes: {0: 2279788, 1: 2281617, 11: 2281617, 4366: 2307773, 4367: 2316771, 4370: 2316827, 4371: 2317149}
[2026-03-31 00:12:54] 2026-03-31 04:12:21,909 | INFO     | --------------------------------------------------
[2026-03-31 00:12:54] 2026-03-31 04:12:21,910 | INFO     | 
[2026-03-31 00:12:54] 2026-03-31 04:12:21,910 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-31 00:12:54] 2026-03-31 04:12:21,935 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,935 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,935 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,936 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,938 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 00:12:54] 2026-03-31 04:12:21,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,938 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 00:12:54] 2026-03-31 04:12:21,939 | INFO     | job 7072602839 has completed (purged errors)
[2026-03-31 00:12:54] 2026-03-31 04:12:21,939 | INFO     | overall cleanup function is called
[2026-03-31 00:12:54] 2026-03-31 04:12:22,947 | INFO     | --- collectZombieJob: --- 10, [680]
[2026-03-31 00:12:54] 2026-03-31 04:12:22,947 | INFO     | zombie collector waiting for pid 680
[2026-03-31 00:12:54] 2026-03-31 04:12:22,947 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 00:12:54] 2026-03-31 04:12:22,948 | INFO     | collected zombie processes
[2026-03-31 00:12:54] 2026-03-31 04:12:22,948 | INFO     | will attempt to kill all subprocesses of pid=680
[2026-03-31 00:12:54] 2026-03-31 04:12:23,036 | INFO     | process IDs to be killed: [680] (in reverse order)
[2026-03-31 00:12:54] 2026-03-31 04:12:23,088 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 00:12:54] 2026-03-31 04:12:23,089 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 00:12:54] 2026-03-31 04:12:23,093 | INFO     | did not find any defunct processes belonging to 680
[2026-03-31 00:12:54] 2026-03-31 04:12:23,096 | INFO     | did not find any defunct processes belonging to 680
[2026-03-31 00:12:54] 2026-03-31 04:12:23,096 | INFO     | Ready for new job
[2026-03-31 00:12:54] 2026-03-31 04:12:23,098 | INFO     | **************************************
[2026-03-31 00:12:54] 2026-03-31 04:12:23,098 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 00:12:54] 2026-03-31 04:12:23,098 | INFO     | **************************************
[2026-03-31 00:12:54] 2026-03-31 04:12:23,098 | INFO     | 
[2026-03-31 00:12:54] 2026-03-31 04:12:23,099 | INFO     | architecture information:
[2026-03-31 00:12:54] 2026-03-31 04:12:23,100 | INFO     | executing command: cat /etc/os-release
[2026-03-31 00:12:54] 2026-03-31 04:12:23,114 | INFO     | cat /etc/os-release:
[2026-03-31 00:12:54] NAME="CentOS Linux"
[2026-03-31 00:12:54] VERSION="7 (Core)"
[2026-03-31 00:12:54] ID="centos"
[2026-03-31 00:12:54] ID_LIKE="rhel fedora"
[2026-03-31 00:12:54] VERSION_ID="7"
[2026-03-31 00:12:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 00:12:54] ANSI_COLOR="0;31"
[2026-03-31 00:12:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 00:12:54] HOME_URL="https://www.centos.org/"
[2026-03-31 00:12:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 00:12:54] 
[2026-03-31 00:12:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 00:12:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 00:12:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 00:12:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 00:12:54] 
[2026-03-31 00:12:54] 2026-03-31 04:12:23,115 | INFO     | **************************************
[2026-03-31 00:12:54] 2026-03-31 04:12:23,618 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-31 00:12:54] 2026-03-31 04:12:23,634 | INFO     | sufficient remaining disk space (29327622144 B)
[2026-03-31 00:12:54] 2026-03-31 04:12:23,634 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 00:12:54] 2026-03-31 04:12:23,635 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 00:12:54] 2026-03-31 04:12:23,635 | INFO     | update_server=False
[2026-03-31 00:12:54] 2026-03-31 04:12:23,635 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 00:12:54] 2026-03-31 04:12:23,635 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 00:12:54] 2026-03-31 04:12:23,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 00:12:54] 2026-03-31 04:12:24,192 | INFO     | all job control threads have been joined
[2026-03-31 00:12:54] 2026-03-31 04:12:24,404 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 00:12:54] 2026-03-31 04:12:24,405 | INFO     | aborting loop
[2026-03-31 00:12:54] 2026-03-31 04:12:24,480 | INFO     | all data control threads have been joined
[2026-03-31 00:12:54] 2026-03-31 04:12:24,636 | INFO     | [job] queue monitor thread has finished
[2026-03-31 00:12:54] 2026-03-31 04:12:24,640 | INFO     | [job] retrieve thread has finished
[2026-03-31 00:12:54] 2026-03-31 04:12:24,953 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 00:12:54] 2026-03-31 04:12:24,992 | INFO     | all payload control threads have been joined
[2026-03-31 00:12:54] 2026-03-31 04:12:25,184 | INFO     | [job] validate thread has finished
[2026-03-31 00:12:54] 2026-03-31 04:12:25,198 | INFO     | [job] control thread has finished
[2026-03-31 00:12:54] 2026-03-31 04:12:25,260 | INFO     | [payload] failed_post thread has finished
[2026-03-31 00:12:54] 2026-03-31 04:12:25,327 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 00:12:54] 2026-03-31 04:12:25,410 | INFO     | [job] job monitor thread has finished
[2026-03-31 00:12:54] 2026-03-31 04:12:25,485 | INFO     | [data] control thread has finished
[2026-03-31 00:12:54] 2026-03-31 04:12:25,731 | INFO     | [data] copytool_out thread has finished
[2026-03-31 00:12:54] 2026-03-31 04:12:25,757 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 00:12:54] 2026-03-31 04:12:25,852 | INFO     | [payload] validate_post thread has finished
[2026-03-31 00:12:54] 2026-03-31 04:12:25,938 | INFO     | [data] copytool_in thread has finished
[2026-03-31 00:12:54] 2026-03-31 04:12:25,994 | INFO     | [payload] control thread has finished
[2026-03-31 00:12:54] 2026-03-31 04:12:26,256 | INFO     | [monitor] cgroup control has ended
[2026-03-31 00:12:54] 2026-03-31 04:12:26,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 00:12:54] 2026-03-31 04:12:30,959 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 00:12:54] 2026-03-31 04:12:33,846 | INFO     | job.realtimelogging is not enabled
[2026-03-31 00:12:54] 2026-03-31 04:12:34,851 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 00:12:54] 2026-03-31 04:12:35,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365557655360)>', '<ExcThread(monitor, started 140364782475008)>']
[2026-03-31 00:12:54] 2026-03-31 04:12:40,849 | INFO     | all workflow threads have been joined
[2026-03-31 00:12:54] 2026-03-31 04:12:40,849 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 00:12:54] 2026-03-31 04:12:40,850 | INFO     | traces error code: 0
[2026-03-31 00:12:54] 2026-03-31 04:12:40,850 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 00:12:54] 2026-03-31 04:12:53,826 | INFO     | PID=28749 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-31 00:12:54] 2026-03-31 04:12:53,827 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 00:12:54] 2026-03-31 04:12:53,827 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 00:12:54] 2026-03-31 04:12:53,827 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 00:12:54] 2026-03-31 04:12:53,827 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 00:12:54] 2026-03-31 04:12:53,827 | INFO     | [monitor] control thread has ended
[2026-03-31 00:12:54] 2026-03-31 04:12:53,941 [wrapper] ==== pilot stdout END ====
[2026-03-31 00:12:54] 2026-03-31 04:12:53,945 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 00:12:54] 2026-03-31 04:12:53,948 [wrapper] pilotpid: 28749
[2026-03-31 00:12:54] 2026-03-31 04:12:53,953 [wrapper] Pilot exit status: 0
[2026-03-31 00:12:54] 2026-03-31 04:12:53,968 [wrapper] pandaids: 7072602839
[2026-03-31 00:12:54] 2026-03-31 04:12:54,016 [wrapper] cleanup supervisor_pilot 19225 28750
[2026-03-31 00:12:54] 2026-03-31 04:12:54,020 [wrapper] Test setup, not cleaning
[2026-03-31 00:12:54] 2026-03-31 04:12:54,024 [wrapper] apfmon messages muted
[2026-03-31 00:12:54] 2026-03-31 04:12:54,027 [wrapper] ==== wrapper stdout END ====
[2026-03-31 00:12:54] 2026-03-31 04:12:54,031 [wrapper] ==== wrapper stderr END ====
[2026-03-31 00:12:54]  *** Error codes and diagnostics ***
[2026-03-31 00:12:54]     "exeErrorCode": 0,
[2026-03-31 00:12:54]     "pilotErrorCode": 0,
[2026-03-31 00:12:54]  *** Listing of results directory ***
[2026-03-31 00:12:54] total 409136
[2026-03-31 00:12:54] -rw-r--r-- 1 boincer umatlas    644034 Mar 30 19:47 pilot3.tar.gz
[2026-03-31 00:12:54] -rw-r--r-- 1 boincer umatlas      5118 Mar 30 19:50 queuedata.json
[2026-03-31 00:12:54] -rwx------ 1 boincer umatlas     36322 Mar 30 19:50 runpilot2-wrapper.sh
[2026-03-31 00:12:54] -rw-r--r-- 1 boincer umatlas       100 Mar 30 22:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 00:12:54] -rwxr-xr-x 1 boincer umatlas      7986 Mar 30 22:58 run_atlas
[2026-03-31 00:12:54] -rw-r--r-- 1 boincer umatlas       105 Mar 30 22:58 job.xml
[2026-03-31 00:12:54] -rw-r--r-- 2 boincer umatlas 222729422 Mar 30 22:58 EVNT.49263189._000413.pool.root.1
[2026-03-31 00:12:54] -rw-r--r-- 2 boincer umatlas     15845 Mar 30 22:58 start_atlas.sh
[2026-03-31 00:12:54] drwxrwx--x 2 boincer umatlas      4096 Mar 30 22:58 shared
[2026-03-31 00:12:54] -rw-r--r-- 2 boincer umatlas    656745 Mar 30 22:58 input.tar.gz
[2026-03-31 00:12:54] -rw-r--r-- 1 boincer umatlas         0 Mar 30 22:58 boinc_lockfile
[2026-03-31 00:12:54] -rw-r--r-- 1 boincer umatlas      2575 Mar 30 22:58 pandaJob.out
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas        57 Mar 30 22:58 setup.sh.local
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas   1004000 Mar 30 22:59 agis_schedconf.cvmfs.json
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas   1511579 Mar 30 22:59 agis_ddmendpoints.agis.ALL.json
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas       432 Mar 30 22:59 workernode_map.json
[2026-03-31 00:12:54] drwx------ 5 boincer umatlas      4096 Mar 30 22:59 pilot3
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas 190557013 Mar 31 00:11 HITS.49263191._009700.pool.root.1
[2026-03-31 00:12:54] -rw-r--r-- 1 boincer umatlas       529 Mar 31 00:11 boinc_task_state.xml
[2026-03-31 00:12:54] -rw-r--r-- 1 boincer umatlas      5952 Mar 31 00:11 init_data.xml
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas        95 Mar 31 00:12 pilot_heartbeat.json
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas      1055 Mar 31 00:12 memory_monitor_summary.json
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas    376539 Mar 31 00:12 log.49263191._009700.job.log.tgz.1
[2026-03-31 00:12:54] -rw-r--r-- 1 boincer umatlas      8192 Mar 31 00:12 boinc_mmap_file
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas      6429 Mar 31 00:12 heartbeat_new.json
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas      6320 Mar 31 00:12 heartbeat.json
[2026-03-31 00:12:54] -rw-r--r-- 1 boincer umatlas        27 Mar 31 00:12 wrapper_checkpoint.txt
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas       745 Mar 31 00:12 pilotlog.txt
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas    427036 Mar 31 00:12 log.49263191._009700.job.log.1
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas       357 Mar 31 00:12 output.list
[2026-03-31 00:12:54] -rw-r--r-- 1 boincer umatlas       620 Mar 31 00:12 runtime_log
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas    819200 Mar 31 00:12 result.tar.gz
[2026-03-31 00:12:54] -rw-r--r-- 1 boincer umatlas      9338 Mar 31 00:12 runtime_log.err
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas       658 Mar 31 00:12 diPLDmfYbR9n9Rq4apOajLDm4fhM0noT9bVoINGKDm3NRKDmQLphMn.diag
[2026-03-31 00:12:54] -rw-r--r-- 1 boincer umatlas     21232 Mar 31 00:12 stderr.txt
[2026-03-31 00:12:54] HITS file was successfully produced:
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas 190557013 Mar 31 00:11 shared/HITS.pool.root.1
[2026-03-31 00:12:54]  *** Contents of shared directory: ***
[2026-03-31 00:12:54] total 405068
[2026-03-31 00:12:54] -rw-r--r-- 2 boincer umatlas 222729422 Mar 30 22:58 ATLAS.root_0
[2026-03-31 00:12:54] -rw-r--r-- 2 boincer umatlas     15845 Mar 30 22:58 start_atlas.sh
[2026-03-31 00:12:54] -rw-r--r-- 2 boincer umatlas    656745 Mar 30 22:58 input.tar.gz
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas 190557013 Mar 31 00:11 HITS.pool.root.1
[2026-03-31 00:12:54] -rw------- 1 boincer umatlas    819200 Mar 31 00:12 result.tar.gz
00:12:56 (24721): run_atlas exited; CPU time 45119.355965
00:12:56 (24721): called boinc_finish(0)

</stderr_txt>
]]>

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