Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:27:38 (989846): wrapper (7.7.26015): starting
23:27:38 (989846): wrapper: running run_atlas (--nthreads 4)
[2026-04-03 23:27:38] Arguments: --nthreads 4
[2026-04-03 23:27:38] Threads: 4
[2026-04-03 23:27:38] Checking for CVMFS
[2026-04-03 23:27:38] No cvmfs_config command found, will try listing directly
[2026-04-03 23:27:38] CVMFS is ok
[2026-04-03 23:27:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-03 23:27:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-03 23:27:38] Further information can be found at the LHC@home message board.
[2026-04-03 23:27:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-03 23:27:38] Checking for apptainer binary...
[2026-04-03 23:27:38] which: no apptainer in ((null))
[2026-04-03 23:27:38] apptainer is not installed, using version from CVMFS
[2026-04-03 23:27:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-03 23:27:38] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-04-03 23:27:38] apptainer works
[2026-04-03 23:27:38] Set ATHENA_PROC_NUMBER=4
[2026-04-03 23:27:38] Set ATHENA_CORE_NUMBER=4
[2026-04-03 23:27:38] Starting ATLAS job with PandaID=7072604904
[2026-04-03 23:27:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-04 01:46:19]  *** The last 200 lines of the pilot log: ***
[2026-04-04 01:46:19] 2026-04-03 23:45:10,487 | INFO     | using path: /var/lib/boinc/var/slot116/slots/0/PanDA_Pilot-7072604904/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 01:46:19] 2026-04-03 23:45:10,487 | INFO     | extracted standard info from prmon json
[2026-04-04 01:46:19] 2026-04-03 23:45:10,487 | INFO     | extracted standard memory fields from prmon json
[2026-04-04 01:46:19] 2026-04-03 23:45:10,488 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-04 01:46:19] 2026-04-03 23:45:10,488 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-04 01:46:19] 2026-04-03 23:45:10,490 | INFO     | fitting pss+swap vs Time
[2026-04-04 01:46:19] 2026-04-03 23:45:10,491 | INFO     | sum of square deviations: 762879420.0
[2026-04-04 01:46:19] 2026-04-03 23:45:10,491 | INFO     | sum of deviations: 5419452889.999997
[2026-04-04 01:46:19] 2026-04-03 23:45:10,492 | INFO     | mean x (centered): 0.0
[2026-04-04 01:46:19] 2026-04-03 23:45:10,492 | INFO     | mean y: 2296671.1481481483
[2026-04-04 01:46:19] 2026-04-03 23:45:10,492 | INFO     | intersect: 2296671.1481481483
[2026-04-04 01:46:19] 2026-04-03 23:45:10,492 | INFO     | chi2: 1.9804885310981493
[2026-04-04 01:46:19] 2026-04-03 23:45:10,492 | INFO     | sum of square deviations: 681212772.5
[2026-04-04 01:46:19] 2026-04-03 23:45:10,493 | INFO     | sum of deviations: 12727573079.000002
[2026-04-04 01:46:19] 2026-04-03 23:45:10,493 | INFO     | mean x (centered): 0.0
[2026-04-04 01:46:19] 2026-04-03 23:45:10,493 | INFO     | mean y: 2309886.3538461537
[2026-04-04 01:46:19] 2026-04-03 23:45:10,493 | INFO     | intersect: 2309886.3538461537
[2026-04-04 01:46:19] 2026-04-03 23:45:10,494 | INFO     | chi2: 1.3171452080652293
[2026-04-04 01:46:19] 2026-04-03 23:45:10,494 | INFO     | current chi2=1.3171452080652293 (change=33.493923979711546 %)
[2026-04-04 01:46:19] 2026-04-03 23:45:10,494 | INFO     | sum of square deviations: 605592750.0
[2026-04-04 01:46:19] 2026-04-03 23:45:10,495 | INFO     | sum of deviations: 12191420289.0
[2026-04-04 01:46:19] 2026-04-03 23:45:10,495 | INFO     | mean x (centered): 0.0
[2026-04-04 01:46:19] 2026-04-03 23:45:10,495 | INFO     | mean y: 2308804.688
[2026-04-04 01:46:19] 2026-04-03 23:45:10,495 | INFO     | intersect: 2308804.688
[2026-04-04 01:46:19] 2026-04-03 23:45:10,495 | INFO     | chi2: 1.3189580051337144
[2026-04-04 01:46:19] 2026-04-03 23:45:10,495 | INFO     | current chi2=1.3189580051337144 (change=-0.13763076822395146 %)
[2026-04-04 01:46:19] 2026-04-03 23:45:10,495 | INFO     | right removable region: 124
[2026-04-04 01:46:19] 2026-04-03 23:45:10,495 | INFO     | sum of square deviations: 681212772.5
[2026-04-04 01:46:19] 2026-04-03 23:45:10,496 | INFO     | sum of deviations: -10890644180.5
[2026-04-04 01:46:19] 2026-04-03 23:45:10,496 | INFO     | mean x (centered): 0.0
[2026-04-04 01:46:19] 2026-04-03 23:45:10,496 | INFO     | mean y: 2326523.8384615383
[2026-04-04 01:46:19] 2026-04-03 23:45:10,496 | INFO     | intersect: 2326523.8384615383
[2026-04-04 01:46:19] 2026-04-03 23:45:10,497 | INFO     | chi2: 0.6940819501333813
[2026-04-04 01:46:19] 2026-04-03 23:45:10,497 | INFO     | current chi2=0.6940819501333813 (change=64.95400305355346 %)
[2026-04-04 01:46:19] 2026-04-03 23:45:10,497 | INFO     | sum of square deviations: 605592750.0
[2026-04-04 01:46:19] 2026-04-03 23:45:10,498 | INFO     | sum of deviations: -10346437835.0
[2026-04-04 01:46:19] 2026-04-03 23:45:10,498 | INFO     | mean x (centered): 0.0
[2026-04-04 01:46:19] 2026-04-03 23:45:10,498 | INFO     | mean y: 2325419.84
[2026-04-04 01:46:19] 2026-04-03 23:45:10,498 | INFO     | intersect: 2325419.84
[2026-04-04 01:46:19] 2026-04-03 23:45:10,498 | INFO     | chi2: 0.6944799959379959
[2026-04-04 01:46:19] 2026-04-03 23:45:10,498 | INFO     | current chi2=0.6944799959379959 (change=-0.057348531328062065 %)
[2026-04-04 01:46:19] 2026-04-03 23:45:10,498 | INFO     | left removable region: 10
[2026-04-04 01:46:19] 2026-04-03 23:45:10,499 | INFO     | sum of square deviations: 459366752.5
[2026-04-04 01:46:19] 2026-04-03 23:45:10,499 | INFO     | sum of deviations: -2926014938.0000005
[2026-04-04 01:46:19] 2026-04-03 23:45:10,499 | INFO     | mean x (centered): 0.0
[2026-04-04 01:46:19] 2026-04-03 23:45:10,499 | INFO     | mean y: 2341145.8771929825
[2026-04-04 01:46:19] 2026-04-03 23:45:10,499 | INFO     | intersect: 2341145.8771929825
[2026-04-04 01:46:19] 2026-04-03 23:45:10,500 | INFO     | chi2: 0.006379623771638857
[2026-04-04 01:46:19] 2026-04-03 23:45:10,500 | INFO     | current memory leak: -6.37 B/s (using 114 data points, chi2=0.01)
[2026-04-04 01:46:19] 2026-04-03 23:45:10,500 | INFO     | could have reported an average CPU frequency of 2753 MHz (8 samples)
[2026-04-04 01:46:19] 2026-04-03 23:45:10,500 | INFO     | ..............................
[2026-04-04 01:46:19] 2026-04-03 23:45:10,500 | INFO     | . Timing measurements:
[2026-04-04 01:46:19] 2026-04-03 23:45:10,500 | INFO     | . get job = 0 s
[2026-04-04 01:46:19] 2026-04-03 23:45:10,501 | INFO     | . initial setup = 7 s
[2026-04-04 01:46:19] 2026-04-03 23:45:10,501 | INFO     | . payload setup = 13 s
[2026-04-04 01:46:19] 2026-04-03 23:45:10,501 | INFO     | . stage-in = 0 s
[2026-04-04 01:46:19] 2026-04-03 23:45:10,501 | INFO     | . payload execution = 8199 s
[2026-04-04 01:46:19] 2026-04-03 23:45:10,501 | INFO     | . stage-out = 0 s
[2026-04-04 01:46:19] 2026-04-03 23:45:10,501 | INFO     | . log creation = 0 s
[2026-04-04 01:46:19] 2026-04-03 23:45:10,501 | INFO     | ..............................
[2026-04-04 01:46:19] 2026-04-03 23:45:10,591 | INFO     | 
[2026-04-04 01:46:19] 2026-04-03 23:45:10,592 | INFO     | job summary report
[2026-04-04 01:46:19] 2026-04-03 23:45:10,592 | INFO     | --------------------------------------------------
[2026-04-04 01:46:19] 2026-04-03 23:45:10,592 | INFO     | PanDA job id: 7072604904
[2026-04-04 01:46:19] 2026-04-03 23:45:10,592 | INFO     | task id: 49263191
[2026-04-04 01:46:19] 2026-04-03 23:45:10,592 | INFO     | errors: (none)
[2026-04-04 01:46:19] 2026-04-03 23:45:10,592 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-04 01:46:19] 2026-04-03 23:45:10,592 | INFO     | pilot state: finished 
[2026-04-04 01:46:19] 2026-04-03 23:45:10,592 | INFO     | transexitcode: 0
[2026-04-04 01:46:19] 2026-04-03 23:45:10,592 | INFO     | exeerrorcode: 0
[2026-04-04 01:46:19] 2026-04-03 23:45:10,592 | INFO     | exeerrordiag: 
[2026-04-04 01:46:19] 2026-04-03 23:45:10,592 | INFO     | exitcode: 0
[2026-04-04 01:46:19] 2026-04-03 23:45:10,593 | INFO     | exitmsg: OK
[2026-04-04 01:46:19] 2026-04-03 23:45:10,593 | INFO     | cpuconsumptiontime: 30856 s
[2026-04-04 01:46:19] 2026-04-03 23:45:10,593 | INFO     | nevents: 400
[2026-04-04 01:46:19] 2026-04-03 23:45:10,593 | INFO     | neventsw: 0
[2026-04-04 01:46:19] 2026-04-03 23:45:10,593 | INFO     | pid: 999318
[2026-04-04 01:46:19] 2026-04-03 23:45:10,593 | INFO     | pgrp: 999318
[2026-04-04 01:46:19] 2026-04-03 23:45:10,593 | INFO     | corecount: 4
[2026-04-04 01:46:19] 2026-04-03 23:45:10,593 | INFO     | event service: False
[2026-04-04 01:46:19] 2026-04-03 23:45:10,593 | INFO     | sizes: {0: 2279975, 1: 2281605, 11: 2281633, 8216: 2309980, 8218: 2319002, 8219: 2319058, 8220: 2319380}
[2026-04-04 01:46:19] 2026-04-03 23:45:10,593 | INFO     | --------------------------------------------------
[2026-04-04 01:46:19] 2026-04-03 23:45:10,593 | INFO     | 
[2026-04-04 01:46:19] 2026-04-03 23:45:10,594 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot116/slots/0
[2026-04-04 01:46:19] 2026-04-03 23:45:10,626 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,626 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,626 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,627 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,627 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,627 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,627 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,627 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,627 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,627 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,627 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,627 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,627 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,627 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,628 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-04 01:46:19] 2026-04-03 23:45:10,628 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,629 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-04 01:46:19] 2026-04-03 23:45:10,629 | INFO     | job 7072604904 has completed (purged errors)
[2026-04-04 01:46:19] 2026-04-03 23:45:10,629 | INFO     | overall cleanup function is called
[2026-04-04 01:46:19] 2026-04-03 23:45:11,638 | INFO     | --- collectZombieJob: --- 10, [999318]
[2026-04-04 01:46:19] 2026-04-03 23:45:11,638 | INFO     | zombie collector waiting for pid 999318
[2026-04-04 01:46:19] 2026-04-03 23:45:11,638 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-04 01:46:19] 2026-04-03 23:45:11,638 | INFO     | collected zombie processes
[2026-04-04 01:46:19] 2026-04-03 23:45:11,639 | INFO     | will attempt to kill all subprocesses of pid=999318
[2026-04-04 01:46:19] 2026-04-03 23:45:12,366 | INFO     | process IDs to be killed: [999318] (in reverse order)
[2026-04-04 01:46:19] 2026-04-03 23:45:12,642 | WARNING  | found no corresponding commands to process id(s)
[2026-04-04 01:46:19] 2026-04-03 23:45:12,642 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-04 01:46:19] 2026-04-03 23:45:12,715 | INFO     | did not find any defunct processes belonging to 999318
[2026-04-04 01:46:19] 2026-04-03 23:45:12,772 | INFO     | did not find any defunct processes belonging to 999318
[2026-04-04 01:46:19] 2026-04-03 23:45:12,773 | INFO     | Ready for new job
[2026-04-04 01:46:19] 2026-04-03 23:45:12,775 | INFO     | **************************************
[2026-04-04 01:46:19] 2026-04-03 23:45:12,775 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-04 01:46:19] 2026-04-03 23:45:12,775 | INFO     | **************************************
[2026-04-04 01:46:19] 2026-04-03 23:45:12,775 | INFO     | 
[2026-04-04 01:46:19] 2026-04-03 23:45:12,785 | INFO     | architecture information:
[2026-04-04 01:46:19] 2026-04-03 23:45:12,786 | INFO     | executing command: cat /etc/os-release
[2026-04-04 01:46:19] 2026-04-03 23:45:12,812 | INFO     | cat /etc/os-release:
[2026-04-04 01:46:19] NAME="CentOS Linux"
[2026-04-04 01:46:19] VERSION="7 (Core)"
[2026-04-04 01:46:19] ID="centos"
[2026-04-04 01:46:19] ID_LIKE="rhel fedora"
[2026-04-04 01:46:19] VERSION_ID="7"
[2026-04-04 01:46:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-04 01:46:19] ANSI_COLOR="0;31"
[2026-04-04 01:46:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-04 01:46:19] HOME_URL="https://www.centos.org/"
[2026-04-04 01:46:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-04 01:46:19] 
[2026-04-04 01:46:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-04 01:46:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-04 01:46:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-04 01:46:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-04 01:46:19] 
[2026-04-04 01:46:19] 2026-04-03 23:45:12,815 | INFO     | **************************************
[2026-04-04 01:46:19] 2026-04-03 23:45:13,317 | INFO     | executing command: df -mP /var/lib/boinc/var/slot116/slots/0
[2026-04-04 01:46:19] 2026-04-03 23:45:13,346 | INFO     | sufficient remaining disk space (311620009984 B)
[2026-04-04 01:46:19] 2026-04-03 23:45:13,347 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-04 01:46:19] 2026-04-03 23:45:13,347 | INFO     | current server update state: UPDATING_FINAL
[2026-04-04 01:46:19] 2026-04-03 23:45:13,347 | INFO     | update_server=False
[2026-04-04 01:46:19] 2026-04-03 23:45:13,347 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-04 01:46:19] 2026-04-03 23:45:13,348 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-04 01:46:19] 2026-04-03 23:45:13,408 | WARNING  | process 999318 can no longer be monitored (due to stat problems) - aborting
[2026-04-04 01:46:19] 2026-04-03 23:45:13,614 | INFO     | all payload control threads have been joined
[2026-04-04 01:46:19] 2026-04-03 23:45:13,739 | INFO     | all data control threads have been joined
[2026-04-04 01:46:19] 2026-04-03 23:45:13,936 | INFO     | using path: /var/lib/boinc/var/slot116/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 01:46:19] 2026-04-03 23:45:14,352 | INFO     | [job] retrieve thread has finished
[2026-04-04 01:46:19] 2026-04-03 23:45:14,564 | INFO     | [job] validate thread has finished
[2026-04-04 01:46:19] 2026-04-03 23:45:14,619 | INFO     | [payload] control thread has finished
[2026-04-04 01:46:19] 2026-04-03 23:45:14,635 | INFO     | number of running child processes to parent process 999318: 1
[2026-04-04 01:46:19] 2026-04-03 23:45:14,635 | INFO     | maximum number of monitored processes: 6
[2026-04-04 01:46:19] 2026-04-03 23:45:14,635 | INFO     | aborting job monitoring since job object (job id=7072604904) has expired
[2026-04-04 01:46:19] 2026-04-03 23:45:14,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-04 01:46:19] 2026-04-03 23:45:14,636 | INFO     | will abort loop
[2026-04-04 01:46:19] 2026-04-03 23:45:14,739 | INFO     | [job] create_data_payload thread has finished
[2026-04-04 01:46:19] 2026-04-03 23:45:14,744 | INFO     | [data] control thread has finished
[2026-04-04 01:46:19] 2026-04-03 23:45:14,843 | INFO     | [payload] validate_post thread has finished
[2026-04-04 01:46:19] 2026-04-03 23:45:15,004 | INFO     | all job control threads have been joined
[2026-04-04 01:46:19] 2026-04-03 23:45:15,010 | INFO     | [payload] validate_pre thread has finished
[2026-04-04 01:46:19] 2026-04-03 23:45:15,281 | INFO     | [payload] failed_post thread has finished
[2026-04-04 01:46:19] 2026-04-03 23:45:15,353 | INFO     | [data] copytool_out thread has finished
[2026-04-04 01:46:19] 2026-04-03 23:45:15,399 | INFO     | [data] copytool_in thread has finished
[2026-04-04 01:46:19] 2026-04-03 23:45:15,601 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-04 01:46:19] 2026-04-03 23:45:15,641 | INFO     | [job] job monitor thread has finished
[2026-04-04 01:46:19] 2026-04-03 23:45:15,852 | INFO     | [payload] execute_payloads thread has finished
[2026-04-04 01:46:19] 2026-04-03 23:45:16,009 | INFO     | [job] control thread has finished
[2026-04-04 01:46:19] 2026-04-03 23:45:16,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-04 01:46:19] 2026-04-03 23:45:16,606 | INFO     | [job] queue monitor thread has finished
[2026-04-04 01:46:19] 2026-04-03 23:45:20,293 | INFO     | [data] queue_monitor thread has finished
[2026-04-04 01:46:19] 2026-04-03 23:45:23,991 | INFO     | job.realtimelogging is not enabled
[2026-04-04 01:46:19] 2026-04-03 23:45:24,996 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-04 01:46:19] 2026-04-03 23:45:44,398 | INFO     | PID=993957 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-04 01:46:19] 2026-04-03 23:45:44,398 | INFO     | .. there are 13 such processes running
[2026-04-04 01:46:19] 2026-04-03 23:45:44,399 | INFO     | found 0 job(s) in 20 queues
[2026-04-04 01:46:19] 2026-04-03 23:45:44,399 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-04 01:46:19] 2026-04-03 23:45:44,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-04 01:46:19] 2026-04-03 23:46:12,043 | INFO     | [monitor] cgroup control has ended
[2026-04-04 01:46:19] 2026-04-03 23:46:13,976 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22385044080448)>', '<ExcThread(monitor, started 22384800433920)>']
[2026-04-04 01:46:19] 2026-04-03 23:46:14,534 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-04 01:46:19] 2026-04-03 23:46:14,534 | INFO     | [monitor] control thread has ended
[2026-04-04 01:46:19] 2026-04-03 23:46:19,001 | INFO     | all workflow threads have been joined
[2026-04-04 01:46:19] 2026-04-03 23:46:19,001 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-04 01:46:19] 2026-04-03 23:46:19,001 | INFO     | traces error code: 0
[2026-04-04 01:46:19] 2026-04-03 23:46:19,002 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-04 01:46:19] 2026-04-03 23:46:19,143 [wrapper] ==== pilot stdout END ====
[2026-04-04 01:46:19] 2026-04-03 23:46:19,147 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-04 01:46:19] 2026-04-03 23:46:19,151 [wrapper] pilotpid: 993957
[2026-04-04 01:46:19] 2026-04-03 23:46:19,155 [wrapper] Pilot exit status: 0
[2026-04-04 01:46:19] 2026-04-03 23:46:19,170 [wrapper] pandaids: 7072604904
[2026-04-04 01:46:19] 2026-04-03 23:46:19,332 [wrapper] cleanup supervisor_pilot 1216768 993958
[2026-04-04 01:46:19] 2026-04-03 23:46:19,336 [wrapper] Test setup, not cleaning
[2026-04-04 01:46:19] 2026-04-03 23:46:19,339 [wrapper] apfmon messages muted
[2026-04-04 01:46:19] 2026-04-03 23:46:19,343 [wrapper] ==== wrapper stdout END ====
[2026-04-04 01:46:19] 2026-04-03 23:46:19,346 [wrapper] ==== wrapper stderr END ====
[2026-04-04 01:46:19]  *** Error codes and diagnostics ***
[2026-04-04 01:46:19]     "exeErrorCode": 0,
[2026-04-04 01:46:19]     "pilotErrorCode": 0,
[2026-04-04 01:46:19]  *** Listing of results directory ***
[2026-04-04 01:46:19] total 417060
[2026-04-04 01:46:19] -rw-r--r--. 1 boinc boinc    644034 Mar 31 01:47 pilot3.tar.gz
[2026-04-04 01:46:19] -rwx------. 1 boinc boinc     36322 Mar 31 01:51 runpilot2-wrapper.sh
[2026-04-04 01:46:19] -rw-r--r--. 1 boinc boinc      5118 Mar 31 01:53 queuedata.json
[2026-04-04 01:46:19] -rw-r--r--. 1 boinc boinc       100 Apr  3 23:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-04 01:46:19] -rwxr-xr-x. 1 boinc boinc      7986 Apr  3 23:27 run_atlas
[2026-04-04 01:46:19] -rw-r--r--. 1 boinc boinc       105 Apr  3 23:27 job.xml
[2026-04-04 01:46:19] -rw-r--r--. 1 boinc boinc      6624 Apr  3 23:27 init_data.xml
[2026-04-04 01:46:19] -rw-r--r--. 2 boinc boinc 223552648 Apr  3 23:27 EVNT.49263189._000452.pool.root.1
[2026-04-04 01:46:19] -rw-r--r--. 2 boinc boinc     15845 Apr  3 23:27 start_atlas.sh
[2026-04-04 01:46:19] drwxrwx--x. 2 boinc boinc      4096 Apr  3 23:27 shared
[2026-04-04 01:46:19] -rw-r--r--. 2 boinc boinc    656746 Apr  3 23:27 input.tar.gz
[2026-04-04 01:46:19] -rw-r--r--. 1 boinc boinc         0 Apr  3 23:27 boinc_lockfile
[2026-04-04 01:46:19] -rw-r--r--. 1 boinc boinc      2577 Apr  3 23:27 pandaJob.out
[2026-04-04 01:46:19] -rw-------. 1 boinc boinc   1005173 Apr  3 23:27 agis_schedconf.cvmfs.json
[2026-04-04 01:46:19] -rw-------. 1 boinc boinc   1511579 Apr  3 23:27 agis_ddmendpoints.agis.ALL.json
[2026-04-04 01:46:19] -rw-------. 1 boinc boinc       444 Apr  3 23:27 workernode_map.json
[2026-04-04 01:46:19] drwx------. 5 boinc boinc      4096 Apr  3 23:27 pilot3
[2026-04-04 01:46:19] -rw-------. 1 boinc boinc 197326855 Apr  4 01:44 HITS.49263191._010663.pool.root.1
[2026-04-04 01:46:19] -rw-------. 1 boinc boinc      1026 Apr  4 01:45 memory_monitor_summary.json
[2026-04-04 01:46:19] -rw-r--r--. 1 boinc boinc       529 Apr  4 01:45 boinc_task_state.xml
[2026-04-04 01:46:19] -rw-------. 1 boinc boinc    281509 Apr  4 01:45 log.49263191._010663.job.log.tgz.1
[2026-04-04 01:46:19] -rw-------. 1 boinc boinc      6371 Apr  4 01:45 heartbeat_new.json
[2026-04-04 01:46:19] -rw-------. 1 boinc boinc      6262 Apr  4 01:45 heartbeat.json
[2026-04-04 01:46:19] -rw-------. 1 boinc boinc        95 Apr  4 01:45 pilot_heartbeat.json
[2026-04-04 01:46:19] -rw-r--r--. 1 boinc boinc      8192 Apr  4 01:46 boinc_mmap_file
[2026-04-04 01:46:19] -rw-r--r--. 1 boinc boinc        27 Apr  4 01:46 wrapper_checkpoint.txt
[2026-04-04 01:46:19] -rw-------. 1 boinc boinc      5433 Apr  4 01:46 pilotlog.txt
[2026-04-04 01:46:19] -rw-------. 1 boinc boinc    780052 Apr  4 01:46 log.49263191._010663.job.log.1
[2026-04-04 01:46:19] -rw-------. 1 boinc boinc       357 Apr  4 01:46 output.list
[2026-04-04 01:46:19] -rw-r--r--. 1 boinc boinc       620 Apr  4 01:46 runtime_log
[2026-04-04 01:46:19] -rw-------. 1 boinc boinc   1075200 Apr  4 01:46 result.tar.gz
[2026-04-04 01:46:19] -rw-r--r--. 1 boinc boinc      9221 Apr  4 01:46 runtime_log.err
[2026-04-04 01:46:19] -rw-------. 1 boinc boinc       662 Apr  4 01:46 GOrMDmfZbR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmsPPKDm0pGN2m.diag
[2026-04-04 01:46:19] -rw-r--r--. 1 boinc boinc     20793 Apr  4 01:46 stderr.txt
[2026-04-04 01:46:19] HITS file was successfully produced:
[2026-04-04 01:46:19] -rw-------. 1 boinc boinc 197326855 Apr  4 01:44 shared/HITS.pool.root.1
[2026-04-04 01:46:19]  *** Contents of shared directory: ***
[2026-04-04 01:46:19] total 412740
[2026-04-04 01:46:19] -rw-r--r--. 2 boinc boinc 223552648 Apr  3 23:27 ATLAS.root_0
[2026-04-04 01:46:19] -rw-r--r--. 2 boinc boinc     15845 Apr  3 23:27 start_atlas.sh
[2026-04-04 01:46:19] -rw-r--r--. 2 boinc boinc    656746 Apr  3 23:27 input.tar.gz
[2026-04-04 01:46:19] -rw-------. 1 boinc boinc 197326855 Apr  4 01:44 HITS.pool.root.1
[2026-04-04 01:46:19] -rw-------. 1 boinc boinc   1075200 Apr  4 01:46 result.tar.gz
01:46:20 (989846): run_atlas exited; CPU time 31362.726820
01:46:20 (989846): called boinc_finish(0)

</stderr_txt>
]]>

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