Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:19:16 (16145): wrapper (7.7.26015): starting
22:19:16 (16145): wrapper: running run_atlas (--nthreads 8)
[2026-03-30 22:19:16] Arguments: --nthreads 8
[2026-03-30 22:19:16] Threads: 8
[2026-03-30 22:19:16] Checking for CVMFS
[2026-03-30 22:19:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 22:19:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 22:19:17] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 22:19:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 22:19:17] 2.11.2.0 31396 297048 143060 157903 2 50 17651601 18432000 1833 130560 0 187637570 99.983 11009161 27602 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-30 22:19:17] CVMFS is ok
[2026-03-30 22:19:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 22:19:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 22:19:17] Further information can be found at the LHC@home message board.
[2026-03-30 22:19:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 22:19:17] Checking for apptainer binary...
[2026-03-30 22:19:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 22:19:17] Running /usr/bin/apptainer --version
[2026-03-30 22:19:17] apptainer version 1.3.2-1.el7
[2026-03-30 22:19:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 22:19:18] c-206-10.aglt2.org
[2026-03-30 22:19:18] apptainer works
[2026-03-30 22:19:18] Set ATHENA_PROC_NUMBER=8
[2026-03-30 22:19:18] Set ATHENA_CORE_NUMBER=8
[2026-03-30 22:19:18] Starting ATLAS job with PandaID=7072604160
[2026-03-30 22:19:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 01:37:59]  *** The last 200 lines of the pilot log: ***
[2026-03-31 01:37:59] 2026-03-31 05:37:10,755 | INFO     | mean x (centered): 0.0
[2026-03-31 01:37:59] 2026-03-31 05:37:10,756 | INFO     | mean y: 2467989.7435897435
[2026-03-31 01:37:59] 2026-03-31 05:37:10,756 | INFO     | intersect: 2467989.7435897435
[2026-03-31 01:37:59] 2026-03-31 05:37:10,756 | INFO     | chi2: 2.285609755561439
[2026-03-31 01:37:59] 2026-03-31 05:37:10,757 | INFO     | sum of square deviations: 2126802667.5
[2026-03-31 01:37:59] 2026-03-31 05:37:10,758 | INFO     | sum of deviations: 26261896564.5
[2026-03-31 01:37:59] 2026-03-31 05:37:10,758 | INFO     | mean x (centered): 0.0
[2026-03-31 01:37:59] 2026-03-31 05:37:10,759 | INFO     | mean y: 2478710.3210526314
[2026-03-31 01:37:59] 2026-03-31 05:37:10,759 | INFO     | intersect: 2478710.3210526314
[2026-03-31 01:37:59] 2026-03-31 05:37:10,759 | INFO     | chi2: 1.5149244385634764
[2026-03-31 01:37:59] 2026-03-31 05:37:10,759 | INFO     | current chi2=1.5149244385634764 (change=33.71902465513632 %)
[2026-03-31 01:37:59] 2026-03-31 05:37:10,760 | INFO     | sum of square deviations: 1963274020.0
[2026-03-31 01:37:59] 2026-03-31 05:37:10,761 | INFO     | sum of deviations: 25577241806.000004
[2026-03-31 01:37:59] 2026-03-31 05:37:10,762 | INFO     | mean x (centered): 0.0
[2026-03-31 01:37:59] 2026-03-31 05:37:10,762 | INFO     | mean y: 2478071.8540540542
[2026-03-31 01:37:59] 2026-03-31 05:37:10,762 | INFO     | intersect: 2478071.8540540542
[2026-03-31 01:37:59] 2026-03-31 05:37:10,762 | INFO     | chi2: 1.5158591845238742
[2026-03-31 01:37:59] 2026-03-31 05:37:10,763 | INFO     | current chi2=1.5158591845238742 (change=-0.06170248077087315 %)
[2026-03-31 01:37:59] 2026-03-31 05:37:10,763 | INFO     | right removable region: 184
[2026-03-31 01:37:59] 2026-03-31 05:37:10,763 | INFO     | sum of square deviations: 2126802667.5
[2026-03-31 01:37:59] 2026-03-31 05:37:10,765 | INFO     | sum of deviations: -17905503026.5
[2026-03-31 01:37:59] 2026-03-31 05:37:10,765 | INFO     | mean x (centered): 0.0
[2026-03-31 01:37:59] 2026-03-31 05:37:10,765 | INFO     | mean y: 2495846.205263158
[2026-03-31 01:37:59] 2026-03-31 05:37:10,765 | INFO     | intersect: 2495846.205263158
[2026-03-31 01:37:59] 2026-03-31 05:37:10,766 | INFO     | chi2: 0.8420165980063973
[2026-03-31 01:37:59] 2026-03-31 05:37:10,766 | INFO     | current chi2=0.8420165980063973 (change=63.16008907655526 %)
[2026-03-31 01:37:59] 2026-03-31 05:37:10,766 | INFO     | sum of square deviations: 1963274020.0
[2026-03-31 01:37:59] 2026-03-31 05:37:10,767 | INFO     | sum of deviations: -21807248985.0
[2026-03-31 01:37:59] 2026-03-31 05:37:10,767 | INFO     | mean x (centered): 0.0
[2026-03-31 01:37:59] 2026-03-31 05:37:10,767 | INFO     | mean y: 2499432.1135135135
[2026-03-31 01:37:59] 2026-03-31 05:37:10,768 | INFO     | intersect: 2499432.1135135135
[2026-03-31 01:37:59] 2026-03-31 05:37:10,768 | INFO     | chi2: 0.8030563960703647
[2026-03-31 01:37:59] 2026-03-31 05:37:10,768 | INFO     | current chi2=0.8030563960703647 (change=4.627011157295091 %)
[2026-03-31 01:37:59] 2026-03-31 05:37:10,768 | INFO     | left removable region: 10
[2026-03-31 01:37:59] 2026-03-31 05:37:10,768 | INFO     | sum of square deviations: 1633472487.5
[2026-03-31 01:37:59] 2026-03-31 05:37:10,769 | INFO     | sum of deviations: -8848495757.500002
[2026-03-31 01:37:59] 2026-03-31 05:37:10,769 | INFO     | mean x (centered): 0.0
[2026-03-31 01:37:59] 2026-03-31 05:37:10,769 | INFO     | mean y: 2511945.143678161
[2026-03-31 01:37:59] 2026-03-31 05:37:10,769 | INFO     | intersect: 2511945.143678161
[2026-03-31 01:37:59] 2026-03-31 05:37:10,770 | INFO     | chi2: 0.011035406748565294
[2026-03-31 01:37:59] 2026-03-31 05:37:10,770 | INFO     | current memory leak: -5.42 B/s (using 174 data points, chi2=0.01)
[2026-03-31 01:37:59] 2026-03-31 05:37:10,770 | INFO     | could have reported an average CPU frequency of 2394 MHz (10 samples)
[2026-03-31 01:37:59] 2026-03-31 05:37:10,770 | INFO     | ..............................
[2026-03-31 01:37:59] 2026-03-31 05:37:10,770 | INFO     | . Timing measurements:
[2026-03-31 01:37:59] 2026-03-31 05:37:10,771 | INFO     | . get job = 0 s
[2026-03-31 01:37:59] 2026-03-31 05:37:10,771 | INFO     | . initial setup = 6 s
[2026-03-31 01:37:59] 2026-03-31 05:37:10,771 | INFO     | . payload setup = 8 s
[2026-03-31 01:37:59] 2026-03-31 05:37:10,771 | INFO     | . stage-in = 0 s
[2026-03-31 01:37:59] 2026-03-31 05:37:10,771 | INFO     | . payload execution = 11840 s
[2026-03-31 01:37:59] 2026-03-31 05:37:10,771 | INFO     | . stage-out = 2 s
[2026-03-31 01:37:59] 2026-03-31 05:37:10,771 | INFO     | . log creation = 0 s
[2026-03-31 01:37:59] 2026-03-31 05:37:10,771 | INFO     | ..............................
[2026-03-31 01:37:59] 2026-03-31 05:37:10,873 | INFO     | 
[2026-03-31 01:37:59] 2026-03-31 05:37:10,873 | INFO     | job summary report
[2026-03-31 01:37:59] 2026-03-31 05:37:10,873 | INFO     | --------------------------------------------------
[2026-03-31 01:37:59] 2026-03-31 05:37:10,873 | INFO     | PanDA job id: 7072604160
[2026-03-31 01:37:59] 2026-03-31 05:37:10,873 | INFO     | task id: 49263191
[2026-03-31 01:37:59] 2026-03-31 05:37:10,874 | INFO     | errors: (none)
[2026-03-31 01:37:59] 2026-03-31 05:37:10,874 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 01:37:59] 2026-03-31 05:37:10,874 | INFO     | pilot state: finished 
[2026-03-31 01:37:59] 2026-03-31 05:37:10,874 | INFO     | transexitcode: 0
[2026-03-31 01:37:59] 2026-03-31 05:37:10,874 | INFO     | exeerrorcode: 0
[2026-03-31 01:37:59] 2026-03-31 05:37:10,874 | INFO     | exeerrordiag: 
[2026-03-31 01:37:59] 2026-03-31 05:37:10,875 | INFO     | exitcode: 0
[2026-03-31 01:37:59] 2026-03-31 05:37:10,875 | INFO     | exitmsg: OK
[2026-03-31 01:37:59] 2026-03-31 05:37:10,875 | INFO     | cpuconsumptiontime: 88540 s
[2026-03-31 01:37:59] 2026-03-31 05:37:10,875 | INFO     | nevents: 400
[2026-03-31 01:37:59] 2026-03-31 05:37:10,875 | INFO     | neventsw: 0
[2026-03-31 01:37:59] 2026-03-31 05:37:10,875 | INFO     | pid: 24512
[2026-03-31 01:37:59] 2026-03-31 05:37:10,876 | INFO     | pgrp: 24512
[2026-03-31 01:37:59] 2026-03-31 05:37:10,876 | INFO     | corecount: 8
[2026-03-31 01:37:59] 2026-03-31 05:37:10,876 | INFO     | event service: False
[2026-03-31 01:37:59] 2026-03-31 05:37:10,876 | INFO     | sizes: {0: 2280013, 1: 2281615, 11852: 2310962, 11855: 2320154}
[2026-03-31 01:37:59] 2026-03-31 05:37:10,876 | INFO     | --------------------------------------------------
[2026-03-31 01:37:59] 2026-03-31 05:37:10,876 | INFO     | 
[2026-03-31 01:37:59] 2026-03-31 05:37:10,877 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-31 01:37:59] 2026-03-31 05:37:10,901 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,902 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,902 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,902 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,902 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,903 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,903 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,903 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,903 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,903 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,903 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,904 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,904 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,905 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 01:37:59] 2026-03-31 05:37:10,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,905 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 01:37:59] 2026-03-31 05:37:10,905 | INFO     | job 7072604160 has completed (purged errors)
[2026-03-31 01:37:59] 2026-03-31 05:37:10,906 | INFO     | overall cleanup function is called
[2026-03-31 01:37:59] 2026-03-31 05:37:11,913 | INFO     | --- collectZombieJob: --- 10, [24512]
[2026-03-31 01:37:59] 2026-03-31 05:37:11,914 | INFO     | zombie collector waiting for pid 24512
[2026-03-31 01:37:59] 2026-03-31 05:37:11,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 01:37:59] 2026-03-31 05:37:11,914 | INFO     | collected zombie processes
[2026-03-31 01:37:59] 2026-03-31 05:37:11,914 | INFO     | will attempt to kill all subprocesses of pid=24512
[2026-03-31 01:37:59] 2026-03-31 05:37:12,082 | INFO     | process IDs to be killed: [24512] (in reverse order)
[2026-03-31 01:37:59] 2026-03-31 05:37:12,141 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 01:37:59] 2026-03-31 05:37:12,142 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 01:37:59] 2026-03-31 05:37:12,144 | INFO     | did not find any defunct processes belonging to 24512
[2026-03-31 01:37:59] 2026-03-31 05:37:12,147 | INFO     | did not find any defunct processes belonging to 24512
[2026-03-31 01:37:59] 2026-03-31 05:37:12,147 | INFO     | Ready for new job
[2026-03-31 01:37:59] 2026-03-31 05:37:12,148 | INFO     | **************************************
[2026-03-31 01:37:59] 2026-03-31 05:37:12,148 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 01:37:59] 2026-03-31 05:37:12,148 | INFO     | **************************************
[2026-03-31 01:37:59] 2026-03-31 05:37:12,148 | INFO     | 
[2026-03-31 01:37:59] 2026-03-31 05:37:12,149 | INFO     | architecture information:
[2026-03-31 01:37:59] 2026-03-31 05:37:12,149 | INFO     | executing command: cat /etc/os-release
[2026-03-31 01:37:59] 2026-03-31 05:37:12,159 | INFO     | cat /etc/os-release:
[2026-03-31 01:37:59] NAME="CentOS Linux"
[2026-03-31 01:37:59] VERSION="7 (Core)"
[2026-03-31 01:37:59] ID="centos"
[2026-03-31 01:37:59] ID_LIKE="rhel fedora"
[2026-03-31 01:37:59] VERSION_ID="7"
[2026-03-31 01:37:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 01:37:59] ANSI_COLOR="0;31"
[2026-03-31 01:37:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 01:37:59] HOME_URL="https://www.centos.org/"
[2026-03-31 01:37:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 01:37:59] 
[2026-03-31 01:37:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 01:37:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 01:37:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 01:37:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 01:37:59] 
[2026-03-31 01:37:59] 2026-03-31 05:37:12,159 | INFO     | **************************************
[2026-03-31 01:37:59] 2026-03-31 05:37:12,662 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-31 01:37:59] 2026-03-31 05:37:12,684 | INFO     | sufficient remaining disk space (27767341056 B)
[2026-03-31 01:37:59] 2026-03-31 05:37:12,684 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 01:37:59] 2026-03-31 05:37:12,685 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 01:37:59] 2026-03-31 05:37:12,685 | INFO     | update_server=False
[2026-03-31 01:37:59] 2026-03-31 05:37:12,685 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 01:37:59] 2026-03-31 05:37:12,685 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 01:37:59] 2026-03-31 05:37:12,686 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 01:37:59] 2026-03-31 05:37:13,326 | INFO     | job.realtimelogging is not enabled
[2026-03-31 01:37:59] 2026-03-31 05:37:13,419 | INFO     | all data control threads have been joined
[2026-03-31 01:37:59] 2026-03-31 05:37:13,572 | INFO     | all job control threads have been joined
[2026-03-31 01:37:59] 2026-03-31 05:37:13,651 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 01:37:59] 2026-03-31 05:37:13,690 | INFO     | [job] retrieve thread has finished
[2026-03-31 01:37:59] 2026-03-31 05:37:13,691 | INFO     | [job] queue monitor thread has finished
[2026-03-31 01:37:59] 2026-03-31 05:37:13,706 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 01:37:59] 2026-03-31 05:37:13,795 | INFO     | all payload control threads have been joined
[2026-03-31 01:37:59] 2026-03-31 05:37:14,207 | INFO     | [payload] validate_post thread has finished
[2026-03-31 01:37:59] 2026-03-31 05:37:14,217 | INFO     | [data] copytool_in thread has finished
[2026-03-31 01:37:59] 2026-03-31 05:37:14,331 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 01:37:59] 2026-03-31 05:37:14,345 | INFO     | [job] validate thread has finished
[2026-03-31 01:37:59] 2026-03-31 05:37:14,403 | INFO     | [payload] failed_post thread has finished
[2026-03-31 01:37:59] 2026-03-31 05:37:14,425 | INFO     | [data] control thread has finished
[2026-03-31 01:37:59] 2026-03-31 05:37:14,578 | INFO     | [job] control thread has finished
[2026-03-31 01:37:59] 2026-03-31 05:37:14,708 | WARNING  | process 24512 can no longer be monitored (due to stat problems) - aborting
[2026-03-31 01:37:59] 2026-03-31 05:37:14,803 | INFO     | [payload] control thread has finished
[2026-03-31 01:37:59] 2026-03-31 05:37:14,842 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 01:37:59] 2026-03-31 05:37:14,843 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 01:37:59] 2026-03-31 05:37:14,843 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-31 01:37:59] 2026-03-31 05:37:14,843 | WARNING  | maxPSS not found in memory monitor output
[2026-03-31 01:37:59] 2026-03-31 05:37:14,844 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7072604160/payload.stdout) since it has not been created yet
[2026-03-31 01:37:59] 2026-03-31 05:37:14,844 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-31 01:37:59] 2026-03-31 05:37:14,859 | INFO     | sufficient remaining disk space (27767341056 B)
[2026-03-31 01:37:59] 2026-03-31 05:37:14,860 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-31 01:37:59] 2026-03-31 05:37:14,860 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7072604160/HITS.49263191._010251.pool.root.1 since it does not exist
[2026-03-31 01:37:59] 2026-03-31 05:37:14,932 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 01:37:59] 2026-03-31 05:37:14,934 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 01:37:59] 2026-03-31 05:37:14,975 | INFO     | number of running child processes to parent process 24512: 1
[2026-03-31 01:37:59] 2026-03-31 05:37:14,976 | INFO     | maximum number of monitored processes: 6
[2026-03-31 01:37:59] 2026-03-31 05:37:14,976 | INFO     | aborting job monitoring since job object (job id=7072604160) has expired
[2026-03-31 01:37:59] 2026-03-31 05:37:14,976 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 01:37:59] 2026-03-31 05:37:14,976 | INFO     | will abort loop
[2026-03-31 01:37:59] 2026-03-31 05:37:15,657 | INFO     | [data] copytool_out thread has finished
[2026-03-31 01:37:59] 2026-03-31 05:37:15,981 | INFO     | [job] job monitor thread has finished
[2026-03-31 01:37:59] 2026-03-31 05:37:16,692 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 01:37:59] 2026-03-31 05:37:43,785 | INFO     | PID=20121 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-31 01:37:59] 2026-03-31 05:37:43,785 | INFO     | .. there are 3 such processes running
[2026-03-31 01:37:59] 2026-03-31 05:37:43,785 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 01:37:59] 2026-03-31 05:37:43,785 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 01:37:59] 2026-03-31 05:37:43,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 01:37:59] 2026-03-31 05:37:53,597 | INFO     | [monitor] cgroup control has ended
[2026-03-31 01:37:59] 2026-03-31 05:37:54,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139661251020608)>', '<ExcThread(monitor, started 139660944709376)>']
[2026-03-31 01:37:59] 2026-03-31 05:37:54,838 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 01:37:59] 2026-03-31 05:37:54,839 | INFO     | [monitor] control thread has ended
[2026-03-31 01:37:59] 2026-03-31 05:37:59,627 | INFO     | all workflow threads have been joined
[2026-03-31 01:37:59] 2026-03-31 05:37:59,628 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 01:37:59] 2026-03-31 05:37:59,628 | INFO     | traces error code: 0
[2026-03-31 01:37:59] 2026-03-31 05:37:59,628 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 01:37:59] 2026-03-31 05:37:59,738 [wrapper] ==== pilot stdout END ====
[2026-03-31 01:37:59] 2026-03-31 05:37:59,741 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 01:37:59] 2026-03-31 05:37:59,743 [wrapper] pilotpid: 20121
[2026-03-31 01:37:59] 2026-03-31 05:37:59,745 [wrapper] Pilot exit status: 0
[2026-03-31 01:37:59] 2026-03-31 05:37:59,754 [wrapper] pandaids: 7072604160
[2026-03-31 01:37:59] 2026-03-31 05:37:59,784 [wrapper] cleanup supervisor_pilot 10094 20122
[2026-03-31 01:37:59] 2026-03-31 05:37:59,786 [wrapper] Test setup, not cleaning
[2026-03-31 01:37:59] 2026-03-31 05:37:59,788 [wrapper] apfmon messages muted
[2026-03-31 01:37:59] 2026-03-31 05:37:59,791 [wrapper] ==== wrapper stdout END ====
[2026-03-31 01:37:59] 2026-03-31 05:37:59,793 [wrapper] ==== wrapper stderr END ====
[2026-03-31 01:37:59]  *** Error codes and diagnostics ***
[2026-03-31 01:37:59]     "exeErrorCode": 0,
[2026-03-31 01:37:59]     "pilotErrorCode": 0,
[2026-03-31 01:37:59]  *** Listing of results directory ***
[2026-03-31 01:37:59] total 420636
[2026-03-31 01:37:59] -rw-r--r-- 1 boincer umatlas    644034 Mar 30 19:47 pilot3.tar.gz
[2026-03-31 01:37:59] -rwx------ 1 boincer umatlas     36322 Mar 30 19:48 runpilot2-wrapper.sh
[2026-03-31 01:37:59] -rw-r--r-- 1 boincer umatlas      5118 Mar 30 19:48 queuedata.json
[2026-03-31 01:37:59] -rw-r--r-- 1 boincer umatlas       100 Mar 30 22:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 01:37:59] -rwxr-xr-x 1 boincer umatlas      7986 Mar 30 22:19 run_atlas
[2026-03-31 01:37:59] -rw-r--r-- 1 boincer umatlas       105 Mar 30 22:19 job.xml
[2026-03-31 01:37:59] -rw-r--r-- 2 boincer umatlas 225639951 Mar 30 22:19 EVNT.49263189._000436.pool.root.1
[2026-03-31 01:37:59] -rw-r--r-- 2 boincer umatlas     15845 Mar 30 22:19 start_atlas.sh
[2026-03-31 01:37:59] drwxrwx--x 2 boincer umatlas      4096 Mar 30 22:19 shared
[2026-03-31 01:37:59] -rw-r--r-- 2 boincer umatlas    656745 Mar 30 22:19 input.tar.gz
[2026-03-31 01:37:59] -rw-r--r-- 1 boincer umatlas         0 Mar 30 22:19 boinc_lockfile
[2026-03-31 01:37:59] -rw-r--r-- 1 boincer umatlas      2574 Mar 30 22:19 pandaJob.out
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas        57 Mar 30 22:19 setup.sh.local
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas   1004000 Mar 30 22:19 agis_schedconf.cvmfs.json
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas       434 Mar 30 22:19 workernode_map.json
[2026-03-31 01:37:59] drwx------ 5 boincer umatlas      4096 Mar 30 22:19 pilot3
[2026-03-31 01:37:59] -rw-r--r-- 1 boincer umatlas      5951 Mar 31 01:27 init_data.xml
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas 198104294 Mar 31 01:36 HITS.49263191._010251.pool.root.1
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas        95 Mar 31 01:36 pilot_heartbeat.json
[2026-03-31 01:37:59] -rw-r--r-- 1 boincer umatlas       530 Mar 31 01:36 boinc_task_state.xml
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas      1048 Mar 31 01:37 memory_monitor_summary.json
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas   1511579 Mar 31 01:37 agis_ddmendpoints.agis.ALL.json
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas    361912 Mar 31 01:37 log.49263191._010251.job.log.tgz.1
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas      6428 Mar 31 01:37 heartbeat_new.json
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas      6319 Mar 31 01:37 heartbeat.json
[2026-03-31 01:37:59] -rw-r--r-- 1 boincer umatlas      8192 Mar 31 01:37 boinc_mmap_file
[2026-03-31 01:37:59] -rw-r--r-- 1 boincer umatlas        28 Mar 31 01:37 wrapper_checkpoint.txt
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas      6369 Mar 31 01:37 pilotlog.txt
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas   1099754 Mar 31 01:37 log.49263191._010251.job.log.1
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas       357 Mar 31 01:37 output.list
[2026-03-31 01:37:59] -rw-r--r-- 1 boincer umatlas       620 Mar 31 01:37 runtime_log
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas   1474560 Mar 31 01:37 result.tar.gz
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas       662 Mar 31 01:37 T2MODm9VbR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmNJRKDm38Ni9n.diag
[2026-03-31 01:37:59] -rw-r--r-- 1 boincer umatlas      9342 Mar 31 01:37 runtime_log.err
[2026-03-31 01:37:59] -rw-r--r-- 1 boincer umatlas     21250 Mar 31 01:37 stderr.txt
[2026-03-31 01:37:59] HITS file was successfully produced:
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas 198104294 Mar 31 01:36 shared/HITS.pool.root.1
[2026-03-31 01:37:59]  *** Contents of shared directory: ***
[2026-03-31 01:37:59] total 415920
[2026-03-31 01:37:59] -rw-r--r-- 2 boincer umatlas 225639951 Mar 30 22:19 ATLAS.root_0
[2026-03-31 01:37:59] -rw-r--r-- 2 boincer umatlas     15845 Mar 30 22:19 start_atlas.sh
[2026-03-31 01:37:59] -rw-r--r-- 2 boincer umatlas    656745 Mar 30 22:19 input.tar.gz
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas 198104294 Mar 31 01:36 HITS.pool.root.1
[2026-03-31 01:37:59] -rw------- 1 boincer umatlas   1474560 Mar 31 01:37 result.tar.gz
01:38:01 (16145): run_atlas exited; CPU time 88683.157773
01:38:01 (16145): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN