Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:38:36 (28974): wrapper (7.7.26015): starting
21:38:36 (28974): wrapper: running run_atlas (--nthreads 8)
[2026-03-30 21:38:36] Arguments: --nthreads 8
[2026-03-30 21:38:36] Threads: 8
[2026-03-30 21:38:36] Checking for CVMFS
[2026-03-30 21:38:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 21:38:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 21:38:37] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 21:38:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 21:38:37] 2.11.2.0 23418 255815 153340 157902 3 50 15690915 18432001 1833 130560 0 154913127 99.984 9267438 25721 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-30 21:38:37] CVMFS is ok
[2026-03-30 21:38:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 21:38:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 21:38:37] Further information can be found at the LHC@home message board.
[2026-03-30 21:38:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 21:38:37] Checking for apptainer binary...
[2026-03-30 21:38:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 21:38:37] Running /usr/bin/apptainer --version
[2026-03-30 21:38:37] apptainer version 1.3.2-1.el7
[2026-03-30 21:38:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 21:38:38] c-206-24.aglt2.org
[2026-03-30 21:38:38] apptainer works
[2026-03-30 21:38:38] Set ATHENA_PROC_NUMBER=8
[2026-03-30 21:38:38] Set ATHENA_CORE_NUMBER=8
[2026-03-30 21:38:38] Starting ATLAS job with PandaID=7072576296
[2026-03-30 21:38:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 00:38:28]  *** The last 200 lines of the pilot log: ***
[2026-03-31 00:38:28] 2026-03-31 04:37:53,660 | INFO     | monitor loop #792: job 0:7072576296 is in state 'finished'
[2026-03-31 00:38:28] 2026-03-31 04:37:53,660 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-31 00:38:28] 2026-03-31 04:37:55,322 | INFO     | job 7072576296 has state=finished
[2026-03-31 00:38:28] 2026-03-31 04:37:55,322 | INFO     | preparing for final server update for job 7072576296 in state='finished'
[2026-03-31 00:38:28] 2026-03-31 04:37:55,323 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7072576296/jobReport.json
[2026-03-31 00:38:28] 2026-03-31 04:37:55,326 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-03-31 00:38:28] 2026-03-31 04:37:55,326 | INFO     | this job has now completed (state=finished)
[2026-03-31 00:38:28] 2026-03-31 04:37:55,326 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 00:38:28] 2026-03-31 04:37:55,327 | INFO     | log transfer has been attempted: DONE
[2026-03-31 00:38:28] 2026-03-31 04:37:55,327 | INFO     | job 7072576296 has finished - writing final server update
[2026-03-31 00:38:28] 2026-03-31 04:37:55,327 | INFO     | total number of processed events: 400 (read)
[2026-03-31 00:38:28] 2026-03-31 04:37:55,332 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7072576296/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 00:38:28] 2026-03-31 04:37:55,333 | INFO     | extracted standard info from prmon json
[2026-03-31 00:38:28] 2026-03-31 04:37:55,333 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 00:38:28] 2026-03-31 04:37:55,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 00:38:28] 2026-03-31 04:37:55,334 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 00:38:28] 2026-03-31 04:37:55,339 | INFO     | fitting pss+swap vs Time
[2026-03-31 00:38:28] 2026-03-31 04:37:55,339 | INFO     | sum of square deviations: 1690450300.0
[2026-03-31 00:38:28] 2026-03-31 04:37:55,341 | INFO     | sum of deviations: 3041204989.5000024
[2026-03-31 00:38:28] 2026-03-31 04:37:55,341 | INFO     | mean x (centered): 0.0
[2026-03-31 00:38:28] 2026-03-31 04:37:55,341 | INFO     | mean y: 2510336.6079545454
[2026-03-31 00:38:28] 2026-03-31 04:37:55,341 | INFO     | intersect: 2510336.6079545454
[2026-03-31 00:38:28] 2026-03-31 04:37:55,342 | INFO     | chi2: 1.4858575618299101
[2026-03-31 00:38:28] 2026-03-31 04:37:55,342 | INFO     | sum of square deviations: 1550429070.0
[2026-03-31 00:38:28] 2026-03-31 04:37:55,344 | INFO     | sum of deviations: 2997252140.999995
[2026-03-31 00:38:28] 2026-03-31 04:37:55,344 | INFO     | mean x (centered): 0.0
[2026-03-31 00:38:28] 2026-03-31 04:37:55,344 | INFO     | mean y: 2510288.7251461986
[2026-03-31 00:38:28] 2026-03-31 04:37:55,344 | INFO     | intersect: 2510288.7251461986
[2026-03-31 00:38:28] 2026-03-31 04:37:55,345 | INFO     | chi2: 1.4863335180722672
[2026-03-31 00:38:28] 2026-03-31 04:37:55,345 | INFO     | current chi2=1.4863335180722672 (change=-0.03203242723824172 %)
[2026-03-31 00:38:28] 2026-03-31 04:37:55,345 | INFO     | right removable region: 170
[2026-03-31 00:38:28] 2026-03-31 04:37:55,345 | INFO     | sum of square deviations: 1550429070.0
[2026-03-31 00:38:28] 2026-03-31 04:37:55,347 | INFO     | sum of deviations: -22073172567.999996
[2026-03-31 00:38:28] 2026-03-31 04:37:55,347 | INFO     | mean x (centered): 0.0
[2026-03-31 00:38:28] 2026-03-31 04:37:55,347 | INFO     | mean y: 2537317.169590643
[2026-03-31 00:38:28] 2026-03-31 04:37:55,347 | INFO     | intersect: 2537317.169590643
[2026-03-31 00:38:28] 2026-03-31 04:37:55,348 | INFO     | chi2: 0.11892705294955694
[2026-03-31 00:38:28] 2026-03-31 04:37:55,348 | INFO     | current chi2=0.11892705294955694 (change=91.99606637912909 %)
[2026-03-31 00:38:28] 2026-03-31 04:37:55,348 | INFO     | sum of square deviations: 1418361477.5
[2026-03-31 00:38:28] 2026-03-31 04:37:55,350 | INFO     | sum of deviations: -19241372678.999996
[2026-03-31 00:38:28] 2026-03-31 04:37:55,350 | INFO     | mean x (centered): 0.0
[2026-03-31 00:38:28] 2026-03-31 04:37:55,350 | INFO     | mean y: 2533999.265060241
[2026-03-31 00:38:28] 2026-03-31 04:37:55,350 | INFO     | intersect: 2533999.265060241
[2026-03-31 00:38:28] 2026-03-31 04:37:55,351 | INFO     | chi2: 0.10732424825618583
[2026-03-31 00:38:28] 2026-03-31 04:37:55,351 | INFO     | current chi2=0.10732424825618583 (change=9.756236622034558 %)
[2026-03-31 00:38:28] 2026-03-31 04:37:55,351 | INFO     | left removable region: 10
[2026-03-31 00:38:28] 2026-03-31 04:37:55,352 | INFO     | sum of square deviations: 1270051720.0
[2026-03-31 00:38:28] 2026-03-31 04:37:55,353 | INFO     | sum of deviations: -18572308880.0
[2026-03-31 00:38:28] 2026-03-31 04:37:55,353 | INFO     | mean x (centered): 0.0
[2026-03-31 00:38:28] 2026-03-31 04:37:55,353 | INFO     | mean y: 2534825.1875
[2026-03-31 00:38:28] 2026-03-31 04:37:55,353 | INFO     | intersect: 2534825.1875
[2026-03-31 00:38:28] 2026-03-31 04:37:55,354 | INFO     | chi2: 0.10515578411700334
[2026-03-31 00:38:28] 2026-03-31 04:37:55,354 | INFO     | current memory leak: -14.62 B/s (using 160 data points, chi2=0.11)
[2026-03-31 00:38:28] 2026-03-31 04:37:55,355 | INFO     | could have reported an average CPU frequency of 2422 MHz (9 samples)
[2026-03-31 00:38:28] 2026-03-31 04:37:55,355 | INFO     | ..............................
[2026-03-31 00:38:28] 2026-03-31 04:37:55,355 | INFO     | . Timing measurements:
[2026-03-31 00:38:28] 2026-03-31 04:37:55,355 | INFO     | . get job = 0 s
[2026-03-31 00:38:28] 2026-03-31 04:37:55,355 | INFO     | . initial setup = 6 s
[2026-03-31 00:38:28] 2026-03-31 04:37:55,356 | INFO     | . payload setup = 7 s
[2026-03-31 00:38:28] 2026-03-31 04:37:55,356 | INFO     | . stage-in = 0 s
[2026-03-31 00:38:28] 2026-03-31 04:37:55,356 | INFO     | . payload execution = 10719 s
[2026-03-31 00:38:28] 2026-03-31 04:37:55,356 | INFO     | . stage-out = 1 s
[2026-03-31 00:38:28] 2026-03-31 04:37:55,356 | INFO     | . log creation = 0 s
[2026-03-31 00:38:28] 2026-03-31 04:37:55,356 | INFO     | ..............................
[2026-03-31 00:38:28] 2026-03-31 04:37:55,492 | INFO     | 
[2026-03-31 00:38:28] 2026-03-31 04:37:55,492 | INFO     | job summary report
[2026-03-31 00:38:28] 2026-03-31 04:37:55,492 | INFO     | --------------------------------------------------
[2026-03-31 00:38:28] 2026-03-31 04:37:55,492 | INFO     | PanDA job id: 7072576296
[2026-03-31 00:38:28] 2026-03-31 04:37:55,493 | INFO     | task id: 49263191
[2026-03-31 00:38:28] 2026-03-31 04:37:55,493 | INFO     | errors: (none)
[2026-03-31 00:38:28] 2026-03-31 04:37:55,493 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 00:38:28] 2026-03-31 04:37:55,493 | INFO     | pilot state: finished 
[2026-03-31 00:38:28] 2026-03-31 04:37:55,493 | INFO     | transexitcode: 0
[2026-03-31 00:38:28] 2026-03-31 04:37:55,493 | INFO     | exeerrorcode: 0
[2026-03-31 00:38:28] 2026-03-31 04:37:55,494 | INFO     | exeerrordiag: 
[2026-03-31 00:38:28] 2026-03-31 04:37:55,494 | INFO     | exitcode: 0
[2026-03-31 00:38:28] 2026-03-31 04:37:55,494 | INFO     | exitmsg: OK
[2026-03-31 00:38:28] 2026-03-31 04:37:55,494 | INFO     | cpuconsumptiontime: 79945 s
[2026-03-31 00:38:28] 2026-03-31 04:37:55,494 | INFO     | nevents: 400
[2026-03-31 00:38:28] 2026-03-31 04:37:55,494 | INFO     | neventsw: 0
[2026-03-31 00:38:28] 2026-03-31 04:37:55,495 | INFO     | pid: 5149
[2026-03-31 00:38:28] 2026-03-31 04:37:55,495 | INFO     | pgrp: 5149
[2026-03-31 00:38:28] 2026-03-31 04:37:55,495 | INFO     | corecount: 8
[2026-03-31 00:38:28] 2026-03-31 04:37:55,495 | INFO     | event service: False
[2026-03-31 00:38:28] 2026-03-31 04:37:55,495 | INFO     | sizes: {0: 2279845, 1: 2281617, 10731: 2310548, 10733: 2319546, 10737: 2319602, 10740: 2319860}
[2026-03-31 00:38:28] 2026-03-31 04:37:55,495 | INFO     | --------------------------------------------------
[2026-03-31 00:38:28] 2026-03-31 04:37:55,495 | INFO     | 
[2026-03-31 00:38:28] 2026-03-31 04:37:55,496 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-31 00:38:28] 2026-03-31 04:37:55,515 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,515 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,515 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,515 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,517 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,518 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,518 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,518 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 00:38:28] 2026-03-31 04:37:55,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,518 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 00:38:28] 2026-03-31 04:37:55,519 | INFO     | job 7072576296 has completed (purged errors)
[2026-03-31 00:38:28] 2026-03-31 04:37:55,519 | INFO     | overall cleanup function is called
[2026-03-31 00:38:28] 2026-03-31 04:37:56,010 | INFO     | PID=568 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-31 00:38:28] 2026-03-31 04:37:56,011 | INFO     | .. there are 3 such processes running
[2026-03-31 00:38:28] 2026-03-31 04:37:56,527 | INFO     | --- collectZombieJob: --- 10, [5149]
[2026-03-31 00:38:28] 2026-03-31 04:37:56,527 | INFO     | zombie collector waiting for pid 5149
[2026-03-31 00:38:28] 2026-03-31 04:37:56,527 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 00:38:28] 2026-03-31 04:37:56,528 | INFO     | collected zombie processes
[2026-03-31 00:38:28] 2026-03-31 04:37:56,528 | INFO     | will attempt to kill all subprocesses of pid=5149
[2026-03-31 00:38:28] 2026-03-31 04:37:56,649 | INFO     | process IDs to be killed: [5149] (in reverse order)
[2026-03-31 00:38:28] 2026-03-31 04:37:56,705 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 00:38:28] 2026-03-31 04:37:56,706 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 00:38:28] 2026-03-31 04:37:56,711 | INFO     | did not find any defunct processes belonging to 5149
[2026-03-31 00:38:28] 2026-03-31 04:37:56,716 | INFO     | did not find any defunct processes belonging to 5149
[2026-03-31 00:38:28] 2026-03-31 04:37:56,716 | INFO     | Ready for new job
[2026-03-31 00:38:28] 2026-03-31 04:37:56,718 | INFO     | **************************************
[2026-03-31 00:38:28] 2026-03-31 04:37:56,718 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 00:38:28] 2026-03-31 04:37:56,718 | INFO     | **************************************
[2026-03-31 00:38:28] 2026-03-31 04:37:56,718 | INFO     | 
[2026-03-31 00:38:28] 2026-03-31 04:37:56,719 | INFO     | architecture information:
[2026-03-31 00:38:28] 2026-03-31 04:37:56,720 | INFO     | executing command: cat /etc/os-release
[2026-03-31 00:38:28] 2026-03-31 04:37:56,732 | INFO     | cat /etc/os-release:
[2026-03-31 00:38:28] NAME="CentOS Linux"
[2026-03-31 00:38:28] VERSION="7 (Core)"
[2026-03-31 00:38:28] ID="centos"
[2026-03-31 00:38:28] ID_LIKE="rhel fedora"
[2026-03-31 00:38:28] VERSION_ID="7"
[2026-03-31 00:38:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 00:38:28] ANSI_COLOR="0;31"
[2026-03-31 00:38:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 00:38:28] HOME_URL="https://www.centos.org/"
[2026-03-31 00:38:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 00:38:28] 
[2026-03-31 00:38:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 00:38:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 00:38:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 00:38:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 00:38:28] 
[2026-03-31 00:38:28] 2026-03-31 04:37:56,733 | INFO     | **************************************
[2026-03-31 00:38:28] 2026-03-31 04:37:57,235 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-31 00:38:28] 2026-03-31 04:37:57,251 | INFO     | sufficient remaining disk space (27909947392 B)
[2026-03-31 00:38:28] 2026-03-31 04:37:57,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 00:38:28] 2026-03-31 04:37:57,252 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 00:38:28] 2026-03-31 04:37:57,252 | INFO     | update_server=False
[2026-03-31 00:38:28] 2026-03-31 04:37:57,253 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 00:38:28] 2026-03-31 04:37:57,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 00:38:28] 2026-03-31 04:37:57,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 00:38:28] 2026-03-31 04:37:57,254 | INFO     | aborting loop
[2026-03-31 00:38:28] 2026-03-31 04:37:57,353 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 00:38:28] 2026-03-31 04:37:57,548 | INFO     | all data control threads have been joined
[2026-03-31 00:38:28] 2026-03-31 04:37:57,714 | INFO     | all job control threads have been joined
[2026-03-31 00:38:28] 2026-03-31 04:37:58,258 | INFO     | [job] retrieve thread has finished
[2026-03-31 00:38:28] 2026-03-31 04:37:58,259 | INFO     | [job] queue monitor thread has finished
[2026-03-31 00:38:28] 2026-03-31 04:37:58,260 | INFO     | [job] job monitor thread has finished
[2026-03-31 00:38:28] 2026-03-31 04:37:58,282 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 00:38:28] 2026-03-31 04:37:58,310 | INFO     | [job] validate thread has finished
[2026-03-31 00:38:28] 2026-03-31 04:37:58,426 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 00:38:28] 2026-03-31 04:37:58,493 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 00:38:28] 2026-03-31 04:37:58,554 | INFO     | [data] control thread has finished
[2026-03-31 00:38:28] 2026-03-31 04:37:58,644 | INFO     | all payload control threads have been joined
[2026-03-31 00:38:28] 2026-03-31 04:37:58,719 | INFO     | [job] control thread has finished
[2026-03-31 00:38:28] 2026-03-31 04:37:58,819 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 00:38:28] 2026-03-31 04:37:58,863 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 00:38:28] 2026-03-31 04:37:59,180 | INFO     | [data] copytool_in thread has finished
[2026-03-31 00:38:28] 2026-03-31 04:37:59,304 | INFO     | [payload] failed_post thread has finished
[2026-03-31 00:38:28] 2026-03-31 04:37:59,359 | INFO     | [data] copytool_out thread has finished
[2026-03-31 00:38:28] 2026-03-31 04:37:59,533 | INFO     | [payload] validate_post thread has finished
[2026-03-31 00:38:28] 2026-03-31 04:37:59,649 | INFO     | [payload] control thread has finished
[2026-03-31 00:38:28] 2026-03-31 04:38:02,431 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 00:38:28] 2026-03-31 04:38:10,859 | INFO     | [monitor] cgroup control has ended
[2026-03-31 00:38:28] 2026-03-31 04:38:12,383 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140309358466880)>', '<ExcThread(monitor, started 140308897576704)>']
[2026-03-31 00:38:28] 2026-03-31 04:38:17,409 | INFO     | all workflow threads have been joined
[2026-03-31 00:38:28] 2026-03-31 04:38:17,409 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 00:38:28] 2026-03-31 04:38:17,409 | INFO     | traces error code: 0
[2026-03-31 00:38:28] 2026-03-31 04:38:17,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 00:38:28] 2026-03-31 04:38:28,221 | INFO     | PID=568 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-03-31 00:38:28] 2026-03-31 04:38:28,221 | INFO     | .. there are 3 such processes running
[2026-03-31 00:38:28] 2026-03-31 04:38:28,222 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 00:38:28] 2026-03-31 04:38:28,222 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 00:38:28] 2026-03-31 04:38:28,222 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 00:38:28] 2026-03-31 04:38:28,222 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 00:38:28] 2026-03-31 04:38:28,222 | INFO     | [monitor] control thread has ended
[2026-03-31 00:38:28] 2026-03-31 04:38:28,344 [wrapper] ==== pilot stdout END ====
[2026-03-31 00:38:28] 2026-03-31 04:38:28,352 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 00:38:28] 2026-03-31 04:38:28,354 [wrapper] pilotpid: 568
[2026-03-31 00:38:28] 2026-03-31 04:38:28,357 [wrapper] Pilot exit status: 0
[2026-03-31 00:38:28] 2026-03-31 04:38:28,367 [wrapper] pandaids: 7072576296
[2026-03-31 00:38:28] 2026-03-31 04:38:28,404 [wrapper] cleanup supervisor_pilot  7815 569
[2026-03-31 00:38:28] 2026-03-31 04:38:28,407 [wrapper] Test setup, not cleaning
[2026-03-31 00:38:28] 2026-03-31 04:38:28,410 [wrapper] apfmon messages muted
[2026-03-31 00:38:28] 2026-03-31 04:38:28,412 [wrapper] ==== wrapper stdout END ====
[2026-03-31 00:38:28] 2026-03-31 04:38:28,414 [wrapper] ==== wrapper stderr END ====
[2026-03-31 00:38:28]  *** Error codes and diagnostics ***
[2026-03-31 00:38:28]     "exeErrorCode": 0,
[2026-03-31 00:38:28]     "pilotErrorCode": 0,
[2026-03-31 00:38:28]  *** Listing of results directory ***
[2026-03-31 00:38:28] total 420084
[2026-03-31 00:38:28] -rw-r--r-- 1 boincer umatlas    644034 Mar 30 18:27 pilot3.tar.gz
[2026-03-31 00:38:28] -rwx------ 1 boincer umatlas     36322 Mar 30 18:31 runpilot2-wrapper.sh
[2026-03-31 00:38:28] -rw-r--r-- 1 boincer umatlas      5118 Mar 30 18:33 queuedata.json
[2026-03-31 00:38:28] -rw-r--r-- 1 boincer umatlas       100 Mar 30 21:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 00:38:28] -rwxr-xr-x 1 boincer umatlas      7986 Mar 30 21:38 run_atlas
[2026-03-31 00:38:28] -rw-r--r-- 1 boincer umatlas       105 Mar 30 21:38 job.xml
[2026-03-31 00:38:28] -rw-r--r-- 2 boincer umatlas 223013867 Mar 30 21:38 EVNT.49263189._000407.pool.root.1
[2026-03-31 00:38:28] drwxrwx--x 2 boincer umatlas      4096 Mar 30 21:38 shared
[2026-03-31 00:38:28] -rw-r--r-- 2 boincer umatlas    656750 Mar 30 21:38 input.tar.gz
[2026-03-31 00:38:28] -rw-r--r-- 2 boincer umatlas     15845 Mar 30 21:38 start_atlas.sh
[2026-03-31 00:38:28] -rw-r--r-- 1 boincer umatlas         0 Mar 30 21:38 boinc_lockfile
[2026-03-31 00:38:28] -rw-r--r-- 1 boincer umatlas      2575 Mar 30 21:38 pandaJob.out
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas        57 Mar 30 21:38 setup.sh.local
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas   1004000 Mar 30 21:38 agis_schedconf.cvmfs.json
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas   1511579 Mar 30 21:38 agis_ddmendpoints.agis.ALL.json
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas       445 Mar 30 21:38 workernode_map.json
[2026-03-31 00:38:28] drwx------ 5 boincer umatlas      4096 Mar 30 21:38 pilot3
[2026-03-31 00:38:28] -rw-r--r-- 1 boincer umatlas      5952 Mar 31 00:28 init_data.xml
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas 200337926 Mar 31 00:37 HITS.49263191._009547.pool.root.1
[2026-03-31 00:38:28] -rw-r--r-- 1 boincer umatlas       530 Mar 31 00:37 boinc_task_state.xml
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas      1054 Mar 31 00:37 memory_monitor_summary.json
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas    375514 Mar 31 00:37 log.49263191._009547.job.log.tgz.1
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas      6443 Mar 31 00:37 heartbeat_new.json
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas      6334 Mar 31 00:37 heartbeat.json
[2026-03-31 00:38:28] -rw-r--r-- 1 boincer umatlas      8192 Mar 31 00:38 boinc_mmap_file
[2026-03-31 00:38:28] -rw-r--r-- 1 boincer umatlas        28 Mar 31 00:38 wrapper_checkpoint.txt
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas       818 Mar 31 00:38 pilotlog.txt
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas        95 Mar 31 00:38 pilot_heartbeat.json
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas    998867 Mar 31 00:38 log.49263191._009547.job.log.1
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas       357 Mar 31 00:38 output.list
[2026-03-31 00:38:28] -rw-r--r-- 1 boincer umatlas       620 Mar 31 00:38 runtime_log
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas   1392640 Mar 31 00:38 result.tar.gz
[2026-03-31 00:38:28] -rw-r--r-- 1 boincer umatlas      9342 Mar 31 00:38 runtime_log.err
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas       662 Mar 31 00:38 NFgNDmZJaR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmXCPKDmrmCKjn.diag
[2026-03-31 00:38:28] -rw-r--r-- 1 boincer umatlas     21243 Mar 31 00:38 stderr.txt
[2026-03-31 00:38:28] HITS file was successfully produced:
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas 200337926 Mar 31 00:37 shared/HITS.pool.root.1
[2026-03-31 00:38:28]  *** Contents of shared directory: ***
[2026-03-31 00:38:28] total 415460
[2026-03-31 00:38:28] -rw-r--r-- 2 boincer umatlas 223013867 Mar 30 21:38 ATLAS.root_0
[2026-03-31 00:38:28] -rw-r--r-- 2 boincer umatlas    656750 Mar 30 21:38 input.tar.gz
[2026-03-31 00:38:28] -rw-r--r-- 2 boincer umatlas     15845 Mar 30 21:38 start_atlas.sh
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas 200337926 Mar 31 00:37 HITS.pool.root.1
[2026-03-31 00:38:28] -rw------- 1 boincer umatlas   1392640 Mar 31 00:38 result.tar.gz
00:38:29 (28974): run_atlas exited; CPU time 80094.568516
00:38:29 (28974): called boinc_finish(0)

</stderr_txt>
]]>

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