Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:47:49 (630188): wrapper (7.7.26015): starting
19:47:49 (630188): wrapper: running run_atlas (--nthreads 4)
[2026-04-03 19:47:49] Arguments: --nthreads 4
[2026-04-03 19:47:49] Threads: 4
[2026-04-03 19:47:49] Checking for CVMFS
[2026-04-03 19:47:49] No cvmfs_config command found, will try listing directly
[2026-04-03 19:47:49] CVMFS is ok
[2026-04-03 19:47:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-03 19:47:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-03 19:47:49] Further information can be found at the LHC@home message board.
[2026-04-03 19:47:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-03 19:47:49] Checking for apptainer binary...
[2026-04-03 19:47:49] which: no apptainer in ((null))
[2026-04-03 19:47:49] apptainer is not installed, using version from CVMFS
[2026-04-03 19:47:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-03 19:47:49] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot20/slots/13/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-04-03 19:47:49] apptainer works
[2026-04-03 19:47:49] Set ATHENA_PROC_NUMBER=4
[2026-04-03 19:47:49] Set ATHENA_CORE_NUMBER=4
[2026-04-03 19:47:49] Starting ATLAS job with PandaID=7072540690
[2026-04-03 19:47:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot20/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-03 21:26:14]  *** The last 200 lines of the pilot log: ***
[2026-04-03 21:26:14]  status=None
[2026-04-03 21:26:14]  status_code=0
[2026-04-03 21:26:14]  storage_token=
[2026-04-03 21:26:14]  surl=/var/lib/boinc/var/slot20/slots/13/PanDA_Pilot-7072540690/log.49263200._011242.job.log.tgz.1
[2026-04-03 21:26:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/89/log.49263200._011242.job.log.tgz.1
[2026-04-03 21:26:14]  workdir=None
[2026-04-03 21:26:14] ]
[2026-04-03 21:26:14] 2026-04-03 19:25:33,726 | INFO     | transferring file log.49263200._011242.job.log.tgz.1 from /var/lib/boinc/var/slot20/slots/13/PanDA_Pilot-7072540690/log.49263200._011242.job.log.tgz.1 to /var/lib/
[2026-04-03 21:26:14] 2026-04-03 19:25:33,726 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot20/slots/13/PanDA_Pilot-7072540690/log.49263200._011242.job.log.tgz.1 /var/lib/boinc/var/slot20/slots/13/
[2026-04-03 21:26:14] 2026-04-03 19:25:33,738 | INFO     | adding to output.list: log.49263200._011242.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/89/log.49263200._011242.job.log.tg
[2026-04-03 21:26:14] 2026-04-03 19:25:33,739 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-03 21:26:14] 2026-04-03 19:25:33,739 | INFO     | summary of transferred files:
[2026-04-03 21:26:14] 2026-04-03 19:25:33,739 | INFO     |  -- lfn=log.49263200._011242.job.log.tgz.1, status_code=0, status=transferred
[2026-04-03 21:26:14] 2026-04-03 19:25:33,739 | INFO     | stage-out finished correctly
[2026-04-03 21:26:14] 2026-04-03 19:25:35,874 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-03 21:26:14] 2026-04-03 19:25:36,832 | WARNING  | process 639216 can no longer be monitored (due to stat problems) - aborting
[2026-04-03 21:26:14] 2026-04-03 19:25:36,833 | INFO     | using path: /var/lib/boinc/var/slot20/slots/13/PanDA_Pilot-7072540690/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 21:26:14] 2026-04-03 19:25:36,834 | INFO     | using path: /var/lib/boinc/var/slot20/slots/13/PanDA_Pilot-7072540690/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 21:26:14] 2026-04-03 19:25:36,834 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-03 21:26:14] 2026-04-03 19:25:36,834 | WARNING  | maxPSS not found in memory monitor output
[2026-04-03 21:26:14] 2026-04-03 19:25:36,834 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2557924 B
[2026-04-03 21:26:14] 2026-04-03 19:25:36,834 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15715 B
[2026-04-03 21:26:14] 2026-04-03 19:25:36,834 | INFO     | executing command: df -mP /var/lib/boinc/var/slot20/slots/13
[2026-04-03 21:26:14] 2026-04-03 19:25:36,844 | INFO     | sufficient remaining disk space (72857157632 B)
[2026-04-03 21:26:14] 2026-04-03 19:25:36,844 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-04-03 21:26:14] 2026-04-03 19:25:36,845 | INFO     | size of work directory /var/lib/boinc/var/slot20/slots/13/PanDA_Pilot-7072540690: 2863904 B (within 5033164800 B limit)
[2026-04-03 21:26:14] 2026-04-03 19:25:36,845 | INFO     | pfn file=/var/lib/boinc/var/slot20/slots/13/PanDA_Pilot-7072540690/HITS.49263200._011242.pool.root.1 does not exist (skip from workdir size calculation)
[2026-04-03 21:26:14] 2026-04-03 19:25:36,845 | INFO     | total size of present files: 0 B (workdir size: 2863904 B)
[2026-04-03 21:26:14] 2026-04-03 19:25:36,845 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot20/slots/13/PanDA_Pilot-7072540690/HITS.49263200._011242.pool.root.1 since it does not exist
[2026-04-03 21:26:14] 2026-04-03 19:25:36,994 | INFO     | number of running child processes to parent process 639216: 1
[2026-04-03 21:26:14] 2026-04-03 19:25:36,995 | INFO     | maximum number of monitored processes: 6
[2026-04-03 21:26:14] 2026-04-03 19:25:37,490 | INFO     | PID=634252 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-03 21:26:14] 2026-04-03 19:25:38,001 | INFO     | job 7072540690 has state=finished
[2026-04-03 21:26:14] 2026-04-03 19:25:38,002 | INFO     | preparing for final server update for job 7072540690 in state='finished'
[2026-04-03 21:26:14] 2026-04-03 19:25:38,002 | INFO     | reading metadata from: /var/lib/boinc/var/slot20/slots/13/PanDA_Pilot-7072540690/jobReport.json
[2026-04-03 21:26:14] 2026-04-03 19:25:38,004 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot20/slots/13/workernode_map.json
[2026-04-03 21:26:14] 2026-04-03 19:25:38,004 | INFO     | this job has now completed (state=finished)
[2026-04-03 21:26:14] 2026-04-03 19:25:38,005 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-03 21:26:14] 2026-04-03 19:25:38,005 | INFO     | log transfer has been attempted: DONE
[2026-04-03 21:26:14] 2026-04-03 19:25:38,005 | INFO     | job 7072540690 has finished - writing final server update
[2026-04-03 21:26:14] 2026-04-03 19:25:38,005 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4151552/.job.ad'
[2026-04-03 21:26:14] 2026-04-03 19:25:38,005 | INFO     | total number of processed events: 400 (read)
[2026-04-03 21:26:14] 2026-04-03 19:25:38,015 | INFO     | using path: /var/lib/boinc/var/slot20/slots/13/PanDA_Pilot-7072540690/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 21:26:14] 2026-04-03 19:25:38,016 | INFO     | extracted standard info from prmon json
[2026-04-03 21:26:14] 2026-04-03 19:25:38,016 | INFO     | extracted standard memory fields from prmon json
[2026-04-03 21:26:14] 2026-04-03 19:25:38,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-03 21:26:14] 2026-04-03 19:25:38,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-03 21:26:14] 2026-04-03 19:25:38,018 | INFO     | fitting pss+swap vs Time
[2026-04-03 21:26:14] 2026-04-03 19:25:38,018 | INFO     | sum of square deviations: 218571540.0
[2026-04-03 21:26:14] 2026-04-03 19:25:38,018 | INFO     | sum of deviations: -19426938522.0
[2026-04-03 21:26:14] 2026-04-03 19:25:38,018 | INFO     | mean x (centered): 0.0
[2026-04-03 21:26:14] 2026-04-03 19:25:38,019 | INFO     | mean y: 2511028.3033707864
[2026-04-03 21:26:14] 2026-04-03 19:25:38,019 | INFO     | intersect: 2511028.3033707864
[2026-04-03 21:26:14] 2026-04-03 19:25:38,019 | INFO     | chi2: 0.19647016863652678
[2026-04-03 21:26:14] 2026-04-03 19:25:38,019 | INFO     | current memory leak: -88.88 B/s (using 89 data points, chi2=0.20)
[2026-04-03 21:26:14] 2026-04-03 19:25:38,019 | INFO     | could have reported an average CPU frequency of 3178 MHz (7 samples)
[2026-04-03 21:26:14] 2026-04-03 19:25:38,019 | INFO     | ..............................
[2026-04-03 21:26:14] 2026-04-03 19:25:38,019 | INFO     | . Timing measurements:
[2026-04-03 21:26:14] 2026-04-03 19:25:38,019 | INFO     | . get job = 0 s
[2026-04-03 21:26:14] 2026-04-03 19:25:38,019 | INFO     | . initial setup = 3 s
[2026-04-03 21:26:14] 2026-04-03 19:25:38,019 | INFO     | . payload setup = 6 s
[2026-04-03 21:26:14] 2026-04-03 19:25:38,020 | INFO     | . stage-in = 0 s
[2026-04-03 21:26:14] 2026-04-03 19:25:38,020 | INFO     | . payload execution = 5833 s
[2026-04-03 21:26:14] 2026-04-03 19:25:38,020 | INFO     | . stage-out = 0 s
[2026-04-03 21:26:14] 2026-04-03 19:25:38,020 | INFO     | . log creation = 0 s
[2026-04-03 21:26:14] 2026-04-03 19:25:38,020 | INFO     | ..............................
[2026-04-03 21:26:14] 2026-04-03 19:25:38,095 | INFO     | 
[2026-04-03 21:26:14] 2026-04-03 19:25:38,095 | INFO     | job summary report
[2026-04-03 21:26:14] 2026-04-03 19:25:38,095 | INFO     | --------------------------------------------------
[2026-04-03 21:26:14] 2026-04-03 19:25:38,095 | INFO     | PanDA job id: 7072540690
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | task id: 49263200
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | errors: (none)
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | pilot state: finished 
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | transexitcode: 0
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | exeerrorcode: 0
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | exeerrordiag: 
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | exitcode: 0
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | exitmsg: OK
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | cpuconsumptiontime: 22203 s
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | nevents: 400
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | neventsw: 0
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | pid: 639216
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | pgrp: 639216
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | corecount: 4
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | event service: False
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | sizes: {0: 2281603, 11: 2281603, 5842: 2308437, 5843: 2317459, 5845: 2317515, 5847: 2317737}
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | --------------------------------------------------
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | 
[2026-04-03 21:26:14] 2026-04-03 19:25:38,096 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot20/slots/13
[2026-04-03 21:26:14] 2026-04-03 19:25:38,109 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,109 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,109 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,109 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,109 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,109 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,110 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,110 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,110 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,110 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,110 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,110 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,110 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,110 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,110 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,110 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,110 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,110 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-03 21:26:14] 2026-04-03 19:25:38,110 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,110 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-03 21:26:14] 2026-04-03 19:25:38,110 | INFO     | job 7072540690 has completed (purged errors)
[2026-04-03 21:26:14] 2026-04-03 19:25:38,110 | INFO     | overall cleanup function is called
[2026-04-03 21:26:14] 2026-04-03 19:25:39,117 | INFO     | --- collectZombieJob: --- 10, [639216]
[2026-04-03 21:26:14] 2026-04-03 19:25:39,117 | INFO     | zombie collector waiting for pid 639216
[2026-04-03 21:26:14] 2026-04-03 19:25:39,117 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-03 21:26:14] 2026-04-03 19:25:39,118 | INFO     | collected zombie processes
[2026-04-03 21:26:14] 2026-04-03 19:25:39,118 | INFO     | will attempt to kill all subprocesses of pid=639216
[2026-04-03 21:26:14] 2026-04-03 19:25:39,265 | INFO     | process IDs to be killed: [639216] (in reverse order)
[2026-04-03 21:26:14] 2026-04-03 19:25:39,323 | WARNING  | found no corresponding commands to process id(s)
[2026-04-03 21:26:14] 2026-04-03 19:25:39,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-03 21:26:14] 2026-04-03 19:25:39,329 | INFO     | did not find any defunct processes belonging to 639216
[2026-04-03 21:26:14] 2026-04-03 19:25:39,335 | INFO     | did not find any defunct processes belonging to 639216
[2026-04-03 21:26:14] 2026-04-03 19:25:39,335 | INFO     | Ready for new job
[2026-04-03 21:26:14] 2026-04-03 19:25:39,336 | INFO     | **************************************
[2026-04-03 21:26:14] 2026-04-03 19:25:39,336 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-03 21:26:14] 2026-04-03 19:25:39,336 | INFO     | **************************************
[2026-04-03 21:26:14] 2026-04-03 19:25:39,336 | INFO     | 
[2026-04-03 21:26:14] 2026-04-03 19:25:39,338 | INFO     | architecture information:
[2026-04-03 21:26:14] 2026-04-03 19:25:39,339 | INFO     | executing command: cat /etc/os-release
[2026-04-03 21:26:14] 2026-04-03 19:25:39,348 | INFO     | cat /etc/os-release:
[2026-04-03 21:26:14] NAME="CentOS Linux"
[2026-04-03 21:26:14] VERSION="7 (Core)"
[2026-04-03 21:26:14] ID="centos"
[2026-04-03 21:26:14] ID_LIKE="rhel fedora"
[2026-04-03 21:26:14] VERSION_ID="7"
[2026-04-03 21:26:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-03 21:26:14] ANSI_COLOR="0;31"
[2026-04-03 21:26:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-03 21:26:14] HOME_URL="https://www.centos.org/"
[2026-04-03 21:26:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-03 21:26:14] 
[2026-04-03 21:26:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-03 21:26:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-03 21:26:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-03 21:26:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-03 21:26:14] 
[2026-04-03 21:26:14] 2026-04-03 19:25:39,348 | INFO     | **************************************
[2026-04-03 21:26:14] 2026-04-03 19:25:39,851 | INFO     | executing command: df -mP /var/lib/boinc/var/slot20/slots/13
[2026-04-03 21:26:14] 2026-04-03 19:25:39,861 | INFO     | sufficient remaining disk space (72860303360 B)
[2026-04-03 21:26:14] 2026-04-03 19:25:39,861 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-03 21:26:14] 2026-04-03 19:25:39,861 | INFO     | current server update state: UPDATING_FINAL
[2026-04-03 21:26:14] 2026-04-03 19:25:39,861 | INFO     | update_server=False
[2026-04-03 21:26:14] 2026-04-03 19:25:39,861 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-03 21:26:14] 2026-04-03 19:25:39,861 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-03 21:26:14] 2026-04-03 19:25:39,861 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-03 21:26:14] 2026-04-03 19:25:39,879 | INFO     | all payload control threads have been joined
[2026-04-03 21:26:14] 2026-04-03 19:25:40,503 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-03 21:26:14] 2026-04-03 19:25:40,503 | INFO     | aborting loop
[2026-04-03 21:26:14] 2026-04-03 19:25:40,866 | INFO     | [job] retrieve thread has finished
[2026-04-03 21:26:14] 2026-04-03 19:25:40,867 | INFO     | [job] queue monitor thread has finished
[2026-04-03 21:26:14] 2026-04-03 19:25:40,885 | INFO     | [payload] control thread has finished
[2026-04-03 21:26:14] 2026-04-03 19:25:40,924 | INFO     | all data control threads have been joined
[2026-04-03 21:26:14] 2026-04-03 19:25:41,017 | INFO     | all job control threads have been joined
[2026-04-03 21:26:14] 2026-04-03 19:25:41,393 | INFO     | [job] validate thread has finished
[2026-04-03 21:26:14] 2026-04-03 19:25:41,508 | INFO     | [job] job monitor thread has finished
[2026-04-03 21:26:14] 2026-04-03 19:25:41,560 | INFO     | [job] create_data_payload thread has finished
[2026-04-03 21:26:14] 2026-04-03 19:25:41,649 | INFO     | [payload] validate_pre thread has finished
[2026-04-03 21:26:14] 2026-04-03 19:25:41,683 | INFO     | [payload] failed_post thread has finished
[2026-04-03 21:26:14] 2026-04-03 19:25:41,798 | INFO     | [data] copytool_in thread has finished
[2026-04-03 21:26:14] 2026-04-03 19:25:41,812 | INFO     | [payload] execute_payloads thread has finished
[2026-04-03 21:26:14] 2026-04-03 19:25:41,867 | INFO     | [data] copytool_out thread has finished
[2026-04-03 21:26:14] 2026-04-03 19:25:41,918 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-03 21:26:14] 2026-04-03 19:25:41,929 | INFO     | [data] control thread has finished
[2026-04-03 21:26:14] 2026-04-03 19:25:42,023 | INFO     | [job] control thread has finished
[2026-04-03 21:26:14] 2026-04-03 19:25:42,360 | INFO     | [payload] validate_post thread has finished
[2026-04-03 21:26:14] 2026-04-03 19:25:45,924 | INFO     | [data] queue_monitor thread has finished
[2026-04-03 21:26:14] 2026-04-03 19:25:50,548 | INFO     | job.realtimelogging is not enabled
[2026-04-03 21:26:14] 2026-04-03 19:25:51,554 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-03 21:26:14] 2026-04-03 19:26:07,881 | INFO     | [monitor] cgroup control has ended
[2026-04-03 21:26:14] 2026-04-03 19:26:09,562 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22865520502592)>', '<ExcThread(monitor, started 22865281033984)>']
[2026-04-03 21:26:14] 2026-04-03 19:26:09,776 | INFO     | PID=634252 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-03 21:26:14] 2026-04-03 19:26:09,776 | INFO     | found 0 job(s) in 20 queues
[2026-04-03 21:26:14] 2026-04-03 19:26:09,777 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-03 21:26:14] 2026-04-03 19:26:09,777 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-03 21:26:14] 2026-04-03 19:26:09,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-03 21:26:14] 2026-04-03 19:26:09,777 | INFO     | [monitor] control thread has ended
[2026-04-03 21:26:14] 2026-04-03 19:26:14,588 | INFO     | all workflow threads have been joined
[2026-04-03 21:26:14] 2026-04-03 19:26:14,588 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-03 21:26:14] 2026-04-03 19:26:14,588 | INFO     | traces error code: 0
[2026-04-03 21:26:14] 2026-04-03 19:26:14,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-03 21:26:14] 2026-04-03 19:26:14,669 [wrapper] ==== pilot stdout END ====
[2026-04-03 21:26:14] 2026-04-03 19:26:14,671 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-03 21:26:14] 2026-04-03 19:26:14,673 [wrapper] pilotpid: 634252
[2026-04-03 21:26:14] 2026-04-03 19:26:14,675 [wrapper] Pilot exit status: 0
[2026-04-03 21:26:14] 2026-04-03 19:26:14,682 [wrapper] pandaids: 7072540690
[2026-04-03 21:26:14] 2026-04-03 19:26:14,726 [wrapper] cleanup supervisor_pilot  692110 634253
[2026-04-03 21:26:14] 2026-04-03 19:26:14,728 [wrapper] Test setup, not cleaning
[2026-04-03 21:26:14] 2026-04-03 19:26:14,730 [wrapper] apfmon messages muted
[2026-04-03 21:26:14] 2026-04-03 19:26:14,732 [wrapper] ==== wrapper stdout END ====
[2026-04-03 21:26:14] 2026-04-03 19:26:14,734 [wrapper] ==== wrapper stderr END ====
[2026-04-03 21:26:14]  *** Error codes and diagnostics ***
[2026-04-03 21:26:14]     "exeErrorCode": 0,
[2026-04-03 21:26:14]     "pilotErrorCode": 0,
[2026-04-03 21:26:14]  *** Listing of results directory ***
[2026-04-03 21:26:14] total 418232
[2026-04-03 21:26:14] -rw-r--r--. 1 boinc boinc    644034 Mar 31 00:27 pilot3.tar.gz
[2026-04-03 21:26:14] -rw-r--r--. 1 boinc boinc      5118 Mar 31 00:28 queuedata.json
[2026-04-03 21:26:14] -rwx------. 1 boinc boinc     36322 Mar 31 00:28 runpilot2-wrapper.sh
[2026-04-03 21:26:14] -rw-r--r--. 1 boinc boinc       100 Apr  3 19:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-03 21:26:14] -rwxr-xr-x. 1 boinc boinc      7986 Apr  3 19:47 run_atlas
[2026-04-03 21:26:14] -rw-r--r--. 1 boinc boinc       105 Apr  3 19:47 job.xml
[2026-04-03 21:26:14] -rw-r--r--. 1 boinc boinc      6564 Apr  3 19:47 init_data.xml
[2026-04-03 21:26:14] -rw-r--r--. 2 boinc boinc 225506118 Apr  3 19:47 EVNT.49263198._000450.pool.root.1
[2026-04-03 21:26:14] -rw-r--r--. 2 boinc boinc     15845 Apr  3 19:47 start_atlas.sh
[2026-04-03 21:26:14] drwxrwx--x. 2 boinc boinc      4096 Apr  3 19:47 shared
[2026-04-03 21:26:14] -rw-r--r--. 2 boinc boinc    656752 Apr  3 19:47 input.tar.gz
[2026-04-03 21:26:14] -rw-r--r--. 1 boinc boinc         0 Apr  3 19:47 boinc_lockfile
[2026-04-03 21:26:14] -rw-r--r--. 1 boinc boinc      2575 Apr  3 19:47 pandaJob.out
[2026-04-03 21:26:14] -rw-------. 1 boinc boinc   1005111 Apr  3 19:47 agis_schedconf.cvmfs.json
[2026-04-03 21:26:14] -rw-------. 1 boinc boinc   1511579 Apr  3 19:47 agis_ddmendpoints.agis.ALL.json
[2026-04-03 21:26:14] -rw-------. 1 boinc boinc       452 Apr  3 19:47 workernode_map.json
[2026-04-03 21:26:14] drwx------. 5 boinc boinc      4096 Apr  3 19:47 pilot3
[2026-04-03 21:26:14] -rw-------. 1 boinc boinc 197030785 Apr  3 21:25 HITS.49263200._011242.pool.root.1
[2026-04-03 21:26:14] -rw-r--r--. 1 boinc boinc       529 Apr  3 21:25 boinc_task_state.xml
[2026-04-03 21:26:14] -rw-------. 1 boinc boinc      1030 Apr  3 21:25 memory_monitor_summary.json
[2026-04-03 21:26:14] -rw-------. 1 boinc boinc    260557 Apr  3 21:25 log.49263200._011242.job.log.tgz.1
[2026-04-03 21:26:14] -rw-------. 1 boinc boinc      6422 Apr  3 21:25 heartbeat_new.json
[2026-04-03 21:26:14] -rw-------. 1 boinc boinc      6313 Apr  3 21:25 heartbeat.json
[2026-04-03 21:26:14] -rw-r--r--. 1 boinc boinc      8192 Apr  3 21:26 boinc_mmap_file
[2026-04-03 21:26:14] -rw-------. 1 boinc boinc        95 Apr  3 21:26 pilot_heartbeat.json
[2026-04-03 21:26:14] -rw-r--r--. 1 boinc boinc        27 Apr  3 21:26 wrapper_checkpoint.txt
[2026-04-03 21:26:14] -rw-------. 1 boinc boinc      4824 Apr  3 21:26 pilotlog.txt
[2026-04-03 21:26:14] -rw-------. 1 boinc boinc    569243 Apr  3 21:26 log.49263200._011242.job.log.1
[2026-04-03 21:26:14] -rw-------. 1 boinc boinc       357 Apr  3 21:26 output.list
[2026-04-03 21:26:14] -rw-r--r--. 1 boinc boinc       620 Apr  3 21:26 runtime_log
[2026-04-03 21:26:14] -rw-------. 1 boinc boinc    849920 Apr  3 21:26 result.tar.gz
[2026-04-03 21:26:14] -rw-r--r--. 1 boinc boinc      9221 Apr  3 21:26 runtime_log.err
[2026-04-03 21:26:14] -rw-------. 1 boinc boinc       661 Apr  3 21:26 FqPNDmyGaR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmi8OKDmUZiu8m.diag
[2026-04-03 21:26:14] -rw-r--r--. 1 boinc boinc     22302 Apr  3 21:26 stderr.txt
[2026-04-03 21:26:14] HITS file was successfully produced:
[2026-04-03 21:26:14] -rw-------. 1 boinc boinc 197030785 Apr  3 21:25 shared/HITS.pool.root.1
[2026-04-03 21:26:14]  *** Contents of shared directory: ***
[2026-04-03 21:26:14] total 414140
[2026-04-03 21:26:14] -rw-r--r--. 2 boinc boinc 225506118 Apr  3 19:47 ATLAS.root_0
[2026-04-03 21:26:14] -rw-r--r--. 2 boinc boinc     15845 Apr  3 19:47 start_atlas.sh
[2026-04-03 21:26:14] -rw-r--r--. 2 boinc boinc    656752 Apr  3 19:47 input.tar.gz
[2026-04-03 21:26:14] -rw-------. 1 boinc boinc 197030785 Apr  3 21:25 HITS.pool.root.1
[2026-04-03 21:26:14] -rw-------. 1 boinc boinc    849920 Apr  3 21:26 result.tar.gz
21:26:15 (630188): run_atlas exited; CPU time 22306.924637
21:26:15 (630188): called boinc_finish(0)

</stderr_txt>
]]>

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