Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:32:47 (28808): wrapper (7.7.26015): starting
20:32:47 (28808): wrapper: running run_atlas (--nthreads 12)
[2026-03-30 20:32:47] Arguments: --nthreads 12
[2026-03-30 20:32:47] Threads: 12
[2026-03-30 20:32:47] Checking for CVMFS
[2026-03-30 20:32:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 20:32:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 20:32:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 20:32:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 20:32:48] 2.11.2.0 2937 466966 98032 157901 3 51 16358684 20275200 1 130560 1 200679889 99.954 26808049 17570 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-30 20:32:48] CVMFS is ok
[2026-03-30 20:32:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 20:32:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 20:32:48] Further information can be found at the LHC@home message board.
[2026-03-30 20:32:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 20:32:48] Checking for apptainer binary...
[2026-03-30 20:32:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 20:32:48] Running /usr/bin/apptainer --version
[2026-03-30 20:32:48] apptainer version 1.3.2-1.el7
[2026-03-30 20:32:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 20:32:49] c-205-8.aglt2.org
[2026-03-30 20:32:49] apptainer works
[2026-03-30 20:32:49] Set ATHENA_PROC_NUMBER=12
[2026-03-30 20:32:49] Set ATHENA_CORE_NUMBER=12
[2026-03-30 20:32:49] Starting ATLAS job with PandaID=7072390108
[2026-03-30 20:32:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-30 21:43:24]  *** The last 200 lines of the pilot log: ***
[2026-03-30 21:43:24]  filetype=log
[2026-03-30 21:43:24]  guid=9edaa995-5d89-4585-a909-ef0abb9f46e3
[2026-03-30 21:43:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-30 21:43:24]  is_altstaged=None
[2026-03-30 21:43:24]  is_tar=False
[2026-03-30 21:43:24]  lfn=log.49263208._010473.job.log.tgz.1
[2026-03-30 21:43:24]  mtime=0
[2026-03-30 21:43:24]  protocol_id=None
[2026-03-30 21:43:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-30 21:43:24]  replicas=None
[2026-03-30 21:43:24]  scope=mc23_13p6TeV
[2026-03-30 21:43:24]  status=None
[2026-03-30 21:43:24]  status_code=0
[2026-03-30 21:43:24]  storage_token=
[2026-03-30 21:43:24]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7072390108/log.49263208._010473.job.log.tgz.1
[2026-03-30 21:43:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/1e/log.49263208._010473.job.log.tgz.1
[2026-03-30 21:43:24]  workdir=None
[2026-03-30 21:43:24] ]
[2026-03-30 21:43:24] 2026-03-31 01:42:18,884 | INFO     | transferring file log.49263208._010473.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7072390108/log.49263208._010473.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-30 21:43:24] 2026-03-31 01:42:18,884 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7072390108/log.49263208._010473.job.log.tgz.1 /tmp/boinchome/slots/0/log.49263208._010473.job
[2026-03-30 21:43:24] 2026-03-31 01:42:18,907 | INFO     | adding to output.list: log.49263208._010473.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/1e/log.49263208._010473.job.log.tg
[2026-03-30 21:43:24] 2026-03-31 01:42:18,908 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-30 21:43:24] 2026-03-31 01:42:18,908 | INFO     | summary of transferred files:
[2026-03-30 21:43:24] 2026-03-31 01:42:18,908 | INFO     |  -- lfn=log.49263208._010473.job.log.tgz.1, status_code=0, status=transferred
[2026-03-30 21:43:24] 2026-03-31 01:42:18,908 | INFO     | stage-out finished correctly
[2026-03-30 21:43:24] 2026-03-31 01:42:19,395 | INFO     | monitor loop #319: job 0:7072390108 is in state 'finished'
[2026-03-30 21:43:24] 2026-03-31 01:42:19,395 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-30 21:43:24] 2026-03-31 01:42:21,898 | INFO     | monitor loop #320: job 0:7072390108 is in state 'finished'
[2026-03-30 21:43:24] 2026-03-31 01:42:21,898 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-30 21:43:24] 2026-03-31 01:42:22,387 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-30 21:43:24] 2026-03-31 01:42:24,405 | INFO     | monitor loop #321: job 0:7072390108 is in state 'finished'
[2026-03-30 21:43:24] 2026-03-31 01:42:24,405 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-30 21:43:24] 2026-03-31 01:42:24,829 | INFO     | job 7072390108 has state=finished
[2026-03-30 21:43:24] 2026-03-31 01:42:24,829 | INFO     | preparing for final server update for job 7072390108 in state='finished'
[2026-03-30 21:43:24] 2026-03-31 01:42:24,830 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7072390108/jobReport.json
[2026-03-30 21:43:24] 2026-03-31 01:42:24,833 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-30 21:43:24] 2026-03-31 01:42:24,833 | INFO     | this job has now completed (state=finished)
[2026-03-30 21:43:24] 2026-03-31 01:42:24,833 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-30 21:43:24] 2026-03-31 01:42:24,833 | INFO     | log transfer has been attempted: DONE
[2026-03-30 21:43:24] 2026-03-31 01:42:24,834 | INFO     | job 7072390108 has finished - writing final server update
[2026-03-30 21:43:24] 2026-03-31 01:42:24,834 | INFO     | total number of processed events: 400 (read)
[2026-03-30 21:43:24] 2026-03-31 01:42:24,837 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7072390108/memory_monitor_summary.json (trf name=prmon)
[2026-03-30 21:43:24] 2026-03-31 01:42:24,837 | INFO     | extracted standard info from prmon json
[2026-03-30 21:43:24] 2026-03-31 01:42:24,838 | INFO     | extracted standard memory fields from prmon json
[2026-03-30 21:43:24] 2026-03-31 01:42:24,838 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-30 21:43:24] 2026-03-31 01:42:24,838 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-30 21:43:24] 2026-03-31 01:42:24,839 | INFO     | fitting pss+swap vs Time
[2026-03-30 21:43:24] 2026-03-31 01:42:24,840 | INFO     | sum of square deviations: 70364110.0
[2026-03-30 21:43:24] 2026-03-31 01:42:24,840 | INFO     | sum of deviations: -5934268856.0
[2026-03-30 21:43:24] 2026-03-31 01:42:24,840 | INFO     | mean x (centered): 0.0
[2026-03-30 21:43:24] 2026-03-31 01:42:24,840 | INFO     | mean y: 2833470.9672131147
[2026-03-30 21:43:24] 2026-03-31 01:42:24,840 | INFO     | intersect: 2833470.9672131147
[2026-03-30 21:43:24] 2026-03-31 01:42:24,841 | INFO     | chi2: 0.09122415940095428
[2026-03-30 21:43:24] 2026-03-31 01:42:24,841 | INFO     | current memory leak: -84.34 B/s (using 61 data points, chi2=0.09)
[2026-03-30 21:43:24] 2026-03-31 01:42:24,841 | INFO     | could have reported an average CPU frequency of 1773 MHz (6 samples)
[2026-03-30 21:43:24] 2026-03-31 01:42:24,841 | INFO     | ..............................
[2026-03-30 21:43:24] 2026-03-31 01:42:24,841 | INFO     | . Timing measurements:
[2026-03-30 21:43:24] 2026-03-31 01:42:24,841 | INFO     | . get job = 0 s
[2026-03-30 21:43:24] 2026-03-31 01:42:24,841 | INFO     | . initial setup = 7 s
[2026-03-30 21:43:24] 2026-03-31 01:42:24,842 | INFO     | . payload setup = 14 s
[2026-03-30 21:43:24] 2026-03-31 01:42:24,842 | INFO     | . stage-in = 0 s
[2026-03-30 21:43:24] 2026-03-31 01:42:24,842 | INFO     | . payload execution = 4116 s
[2026-03-30 21:43:24] 2026-03-31 01:42:24,842 | INFO     | . stage-out = 0 s
[2026-03-30 21:43:24] 2026-03-31 01:42:24,842 | INFO     | . log creation = 0 s
[2026-03-30 21:43:24] 2026-03-31 01:42:24,842 | INFO     | ..............................
[2026-03-30 21:43:24] 2026-03-31 01:42:24,921 | INFO     | 
[2026-03-30 21:43:24] 2026-03-31 01:42:24,922 | INFO     | job summary report
[2026-03-30 21:43:24] 2026-03-31 01:42:24,922 | INFO     | --------------------------------------------------
[2026-03-30 21:43:24] 2026-03-31 01:42:24,922 | INFO     | PanDA job id: 7072390108
[2026-03-30 21:43:24] 2026-03-31 01:42:24,922 | INFO     | task id: 49263208
[2026-03-30 21:43:24] 2026-03-31 01:42:24,922 | INFO     | errors: (none)
[2026-03-30 21:43:24] 2026-03-31 01:42:24,922 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-30 21:43:24] 2026-03-31 01:42:24,922 | INFO     | pilot state: finished 
[2026-03-30 21:43:24] 2026-03-31 01:42:24,922 | INFO     | transexitcode: 0
[2026-03-30 21:43:24] 2026-03-31 01:42:24,922 | INFO     | exeerrorcode: 0
[2026-03-30 21:43:24] 2026-03-31 01:42:24,923 | INFO     | exeerrordiag: 
[2026-03-30 21:43:24] 2026-03-31 01:42:24,923 | INFO     | exitcode: 0
[2026-03-30 21:43:24] 2026-03-31 01:42:24,923 | INFO     | exitmsg: OK
[2026-03-30 21:43:24] 2026-03-31 01:42:24,923 | INFO     | cpuconsumptiontime: 43644 s
[2026-03-30 21:43:24] 2026-03-31 01:42:24,923 | INFO     | nevents: 400
[2026-03-30 21:43:24] 2026-03-31 01:42:24,923 | INFO     | neventsw: 0
[2026-03-30 21:43:24] 2026-03-31 01:42:24,923 | INFO     | pid: 4940
[2026-03-30 21:43:24] 2026-03-31 01:42:24,923 | INFO     | pgrp: 4940
[2026-03-30 21:43:24] 2026-03-31 01:42:24,923 | INFO     | corecount: 12
[2026-03-30 21:43:24] 2026-03-31 01:42:24,923 | INFO     | event service: False
[2026-03-30 21:43:24] 2026-03-31 01:42:24,924 | INFO     | sizes: {0: 2279133, 1: 2281619, 12: 2281619, 4134: 2307598, 4136: 2316596, 4140: 2316652, 4142: 2316974}
[2026-03-30 21:43:24] 2026-03-31 01:42:24,924 | INFO     | --------------------------------------------------
[2026-03-30 21:43:24] 2026-03-31 01:42:24,924 | INFO     | 
[2026-03-30 21:43:24] 2026-03-31 01:42:24,924 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-30 21:43:24] 2026-03-31 01:42:24,949 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,949 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,949 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,949 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,950 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,950 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,950 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,950 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,950 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,950 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,951 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,951 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,951 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,951 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,951 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,951 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,952 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,952 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-30 21:43:24] 2026-03-31 01:42:24,952 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,952 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-30 21:43:24] 2026-03-31 01:42:24,952 | INFO     | job 7072390108 has completed (purged errors)
[2026-03-30 21:43:24] 2026-03-31 01:42:24,952 | INFO     | overall cleanup function is called
[2026-03-30 21:43:24] 2026-03-31 01:42:25,961 | INFO     | --- collectZombieJob: --- 10, [4940]
[2026-03-30 21:43:24] 2026-03-31 01:42:25,961 | INFO     | zombie collector waiting for pid 4940
[2026-03-30 21:43:24] 2026-03-31 01:42:25,961 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-30 21:43:24] 2026-03-31 01:42:25,961 | INFO     | collected zombie processes
[2026-03-30 21:43:24] 2026-03-31 01:42:25,962 | INFO     | will attempt to kill all subprocesses of pid=4940
[2026-03-30 21:43:24] 2026-03-31 01:42:26,053 | INFO     | process IDs to be killed: [4940] (in reverse order)
[2026-03-30 21:43:24] 2026-03-31 01:42:26,107 | WARNING  | found no corresponding commands to process id(s)
[2026-03-30 21:43:24] 2026-03-31 01:42:26,108 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-30 21:43:24] 2026-03-31 01:42:26,110 | INFO     | did not find any defunct processes belonging to 4940
[2026-03-30 21:43:24] 2026-03-31 01:42:26,112 | INFO     | did not find any defunct processes belonging to 4940
[2026-03-30 21:43:24] 2026-03-31 01:42:26,113 | INFO     | Ready for new job
[2026-03-30 21:43:24] 2026-03-31 01:42:26,114 | INFO     | **************************************
[2026-03-30 21:43:24] 2026-03-31 01:42:26,114 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-30 21:43:24] 2026-03-31 01:42:26,114 | INFO     | **************************************
[2026-03-30 21:43:24] 2026-03-31 01:42:26,114 | INFO     | 
[2026-03-30 21:43:24] 2026-03-31 01:42:26,114 | INFO     | architecture information:
[2026-03-30 21:43:24] 2026-03-31 01:42:26,115 | INFO     | executing command: cat /etc/os-release
[2026-03-30 21:43:24] 2026-03-31 01:42:26,130 | INFO     | cat /etc/os-release:
[2026-03-30 21:43:24] NAME="CentOS Linux"
[2026-03-30 21:43:24] VERSION="7 (Core)"
[2026-03-30 21:43:24] ID="centos"
[2026-03-30 21:43:24] ID_LIKE="rhel fedora"
[2026-03-30 21:43:24] VERSION_ID="7"
[2026-03-30 21:43:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-30 21:43:24] ANSI_COLOR="0;31"
[2026-03-30 21:43:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-30 21:43:24] HOME_URL="https://www.centos.org/"
[2026-03-30 21:43:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-30 21:43:24] 
[2026-03-30 21:43:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-30 21:43:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-30 21:43:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-30 21:43:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-30 21:43:24] 
[2026-03-30 21:43:24] 2026-03-31 01:42:26,131 | INFO     | **************************************
[2026-03-30 21:43:24] 2026-03-31 01:42:26,634 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-30 21:43:24] 2026-03-31 01:42:26,651 | INFO     | sufficient remaining disk space (29332865024 B)
[2026-03-30 21:43:24] 2026-03-31 01:42:26,651 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-30 21:43:24] 2026-03-31 01:42:26,651 | INFO     | current server update state: UPDATING_FINAL
[2026-03-30 21:43:24] 2026-03-31 01:42:26,652 | INFO     | update_server=False
[2026-03-30 21:43:24] 2026-03-31 01:42:26,652 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-30 21:43:24] 2026-03-31 01:42:26,652 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-30 21:43:24] 2026-03-31 01:42:26,793 | INFO     | all data control threads have been joined
[2026-03-30 21:43:24] 2026-03-31 01:42:26,908 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-30 21:43:24] 2026-03-31 01:42:26,909 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-30 21:43:24] 2026-03-31 01:42:26,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-30 21:43:24] 2026-03-31 01:42:26,917 | INFO     | will abort loop
[2026-03-30 21:43:24] 2026-03-31 01:42:26,998 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-30 21:43:24] 2026-03-31 01:42:27,657 | INFO     | [job] retrieve thread has finished
[2026-03-30 21:43:24] 2026-03-31 01:42:27,658 | INFO     | [job] queue monitor thread has finished
[2026-03-30 21:43:24] 2026-03-31 01:42:27,799 | INFO     | [data] control thread has finished
[2026-03-30 21:43:24] 2026-03-31 01:42:27,910 | INFO     | all payload control threads have been joined
[2026-03-30 21:43:24] 2026-03-31 01:42:27,923 | INFO     | [job] job monitor thread has finished
[2026-03-30 21:43:24] 2026-03-31 01:42:27,926 | INFO     | all job control threads have been joined
[2026-03-30 21:43:24] 2026-03-31 01:42:27,988 | INFO     | [job] validate thread has finished
[2026-03-30 21:43:24] 2026-03-31 01:42:28,179 | INFO     | [job] create_data_payload thread has finished
[2026-03-30 21:43:24] 2026-03-31 01:42:28,228 | INFO     | [payload] execute_payloads thread has finished
[2026-03-30 21:43:24] 2026-03-31 01:42:28,471 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-30 21:43:24] 2026-03-31 01:42:28,477 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-30 21:43:24] 2026-03-31 01:42:28,492 | INFO     | [payload] validate_pre thread has finished
[2026-03-30 21:43:24] 2026-03-31 01:42:28,526 | INFO     | [payload] failed_post thread has finished
[2026-03-30 21:43:24] 2026-03-31 01:42:28,554 | INFO     | [data] copytool_in thread has finished
[2026-03-30 21:43:24] 2026-03-31 01:42:28,915 | INFO     | [payload] control thread has finished
[2026-03-30 21:43:24] 2026-03-31 01:42:28,931 | INFO     | [job] control thread has finished
[2026-03-30 21:43:24] 2026-03-31 01:42:29,003 | INFO     | [data] copytool_out thread has finished
[2026-03-30 21:43:24] 2026-03-31 01:42:29,151 | INFO     | [payload] validate_post thread has finished
[2026-03-30 21:43:24] 2026-03-31 01:42:32,477 | INFO     | [data] queue_monitor thread has finished
[2026-03-30 21:43:24] 2026-03-31 01:42:57,445 | INFO     | PID=364 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-03-30 21:43:24] 2026-03-31 01:42:57,446 | INFO     | found 0 job(s) in 20 queues
[2026-03-30 21:43:24] 2026-03-31 01:42:57,446 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-30 21:43:24] 2026-03-31 01:42:57,446 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-30 21:43:24] 2026-03-31 01:43:17,222 | INFO     | [monitor] cgroup control has ended
[2026-03-30 21:43:24] 2026-03-31 01:43:18,764 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140425503504192)>', '<ExcThread(monitor, started 140425054627584)>']
[2026-03-30 21:43:24] 2026-03-31 01:43:19,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-30 21:43:24] 2026-03-31 01:43:19,554 | INFO     | [monitor] control thread has ended
[2026-03-30 21:43:24] 2026-03-31 01:43:23,776 | INFO     | all workflow threads have been joined
[2026-03-30 21:43:24] 2026-03-31 01:43:23,776 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-30 21:43:24] 2026-03-31 01:43:23,776 | INFO     | traces error code: 0
[2026-03-30 21:43:24] 2026-03-31 01:43:23,777 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-30 21:43:24] 2026-03-31 01:43:23,868 [wrapper] ==== pilot stdout END ====
[2026-03-30 21:43:24] 2026-03-31 01:43:23,872 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-30 21:43:24] 2026-03-31 01:43:23,875 [wrapper] pilotpid: 364
[2026-03-30 21:43:24] 2026-03-31 01:43:23,879 [wrapper] Pilot exit status: 0
[2026-03-30 21:43:24] 2026-03-31 01:43:23,894 [wrapper] pandaids: 7072390108
[2026-03-30 21:43:24] 2026-03-31 01:43:23,942 [wrapper] cleanup supervisor_pilot 23430 365
[2026-03-30 21:43:24] 2026-03-31 01:43:23,946 [wrapper] Test setup, not cleaning
[2026-03-30 21:43:24] 2026-03-31 01:43:23,950 [wrapper] apfmon messages muted
[2026-03-30 21:43:24] 2026-03-31 01:43:23,954 [wrapper] ==== wrapper stdout END ====
[2026-03-30 21:43:24] 2026-03-31 01:43:23,959 [wrapper] ==== wrapper stderr END ====
[2026-03-30 21:43:24]  *** Error codes and diagnostics ***
[2026-03-30 21:43:24]     "exeErrorCode": 0,
[2026-03-30 21:43:24]     "pilotErrorCode": 0,
[2026-03-30 21:43:24]  *** Listing of results directory ***
[2026-03-30 21:43:24] total 404356
[2026-03-30 21:43:24] -rw-r--r-- 1 boincer umatlas    644034 Mar 30 17:19 pilot3.tar.gz
[2026-03-30 21:43:24] -rwx------ 1 boincer umatlas     36322 Mar 30 17:22 runpilot2-wrapper.sh
[2026-03-30 21:43:24] -rw-r--r-- 1 boincer umatlas      5118 Mar 30 17:24 queuedata.json
[2026-03-30 21:43:24] -rw-r--r-- 1 boincer umatlas       100 Mar 30 20:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-30 21:43:24] -rwxr-xr-x 1 boincer umatlas      7986 Mar 30 20:32 run_atlas
[2026-03-30 21:43:24] -rw-r--r-- 1 boincer umatlas       105 Mar 30 20:32 job.xml
[2026-03-30 21:43:24] -rw-r--r-- 2 boincer umatlas 222333901 Mar 30 20:32 EVNT.49263206._000468.pool.root.1
[2026-03-30 21:43:24] -rw-r--r-- 2 boincer umatlas     15845 Mar 30 20:32 start_atlas.sh
[2026-03-30 21:43:24] drwxrwx--x 2 boincer umatlas      4096 Mar 30 20:32 shared
[2026-03-30 21:43:24] -rw-r--r-- 2 boincer umatlas    656745 Mar 30 20:32 input.tar.gz
[2026-03-30 21:43:24] -rw-r--r-- 1 boincer umatlas         0 Mar 30 20:32 boinc_lockfile
[2026-03-30 21:43:24] -rw-r--r-- 1 boincer umatlas      2575 Mar 30 20:32 pandaJob.out
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas        57 Mar 30 20:32 setup.sh.local
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas   1004000 Mar 30 20:33 agis_schedconf.cvmfs.json
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas   1511579 Mar 30 20:33 agis_ddmendpoints.agis.ALL.json
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas       432 Mar 30 20:33 workernode_map.json
[2026-03-30 21:43:24] drwx------ 5 boincer umatlas      4096 Mar 30 20:33 pilot3
[2026-03-30 21:43:24] -rw-r--r-- 1 boincer umatlas      5952 Mar 30 21:38 init_data.xml
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas 186101427 Mar 30 21:41 HITS.49263208._010473.pool.root.1
[2026-03-30 21:43:24] -rw-r--r-- 1 boincer umatlas       529 Mar 30 21:41 boinc_task_state.xml
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas        95 Mar 30 21:41 pilot_heartbeat.json
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas      1056 Mar 30 21:42 memory_monitor_summary.json
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas    372929 Mar 30 21:42 log.49263208._010473.job.log.tgz.1
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas      6437 Mar 30 21:42 heartbeat_new.json
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas      6328 Mar 30 21:42 heartbeat.json
[2026-03-30 21:43:24] -rw-r--r-- 1 boincer umatlas        27 Mar 30 21:43 wrapper_checkpoint.txt
[2026-03-30 21:43:24] -rw-r--r-- 1 boincer umatlas      8192 Mar 30 21:43 boinc_mmap_file
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas      4925 Mar 30 21:43 pilotlog.txt
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas    408583 Mar 30 21:43 log.49263208._010473.job.log.1
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas       357 Mar 30 21:43 output.list
[2026-03-30 21:43:24] -rw-r--r-- 1 boincer umatlas       620 Mar 30 21:43 runtime_log
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas    798720 Mar 30 21:43 result.tar.gz
[2026-03-30 21:43:24] -rw-r--r-- 1 boincer umatlas      9338 Mar 30 21:43 runtime_log.err
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas       658 Mar 30 21:43 jSHKDmHFZR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmT3OKDmbeiFwn.diag
[2026-03-30 21:43:24] -rw-r--r-- 1 boincer umatlas     21239 Mar 30 21:43 stderr.txt
[2026-03-30 21:43:24] HITS file was successfully produced:
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas 186101427 Mar 30 21:41 shared/HITS.pool.root.1
[2026-03-30 21:43:24]  *** Contents of shared directory: ***
[2026-03-30 21:43:24] total 400304
[2026-03-30 21:43:24] -rw-r--r-- 2 boincer umatlas 222333901 Mar 30 20:32 ATLAS.root_0
[2026-03-30 21:43:24] -rw-r--r-- 2 boincer umatlas     15845 Mar 30 20:32 start_atlas.sh
[2026-03-30 21:43:24] -rw-r--r-- 2 boincer umatlas    656745 Mar 30 20:32 input.tar.gz
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas 186101427 Mar 30 21:41 HITS.pool.root.1
[2026-03-30 21:43:24] -rw------- 1 boincer umatlas    798720 Mar 30 21:43 result.tar.gz
21:43:25 (28808): run_atlas exited; CPU time 43615.513236
21:43:25 (28808): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN