Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:02:17 (26318): wrapper (7.7.26015): starting
20:02:17 (26318): wrapper: running run_atlas (--nthreads 8)
[2026-03-30 20:02:17] Arguments: --nthreads 8
[2026-03-30 20:02:17] Threads: 8
[2026-03-30 20:02:17] Checking for CVMFS
[2026-03-30 20:02:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 20:02:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 20:02:17] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 20:02:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 20:02:18] 2.11.2.0 23418 255719 152660 157900 0 50 15672233 18432001 1833 130560 0 154843152 99.984 9264747 25719 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-30 20:02:18] CVMFS is ok
[2026-03-30 20:02:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 20:02:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 20:02:18] Further information can be found at the LHC@home message board.
[2026-03-30 20:02:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 20:02:18] Checking for apptainer binary...
[2026-03-30 20:02:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 20:02:18] Running /usr/bin/apptainer --version
[2026-03-30 20:02:18] apptainer version 1.3.2-1.el7
[2026-03-30 20:02:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 20:02:18] c-206-24.aglt2.org
[2026-03-30 20:02:18] apptainer works
[2026-03-30 20:02:18] Set ATHENA_PROC_NUMBER=8
[2026-03-30 20:02:18] Set ATHENA_CORE_NUMBER=8
[2026-03-30 20:02:18] Starting ATLAS job with PandaID=7072267060
[2026-03-30 20:02:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-30 23:03:23]  *** The last 200 lines of the pilot log: ***
[2026-03-30 23:03:23] 2026-03-31 03:02:48,499 | INFO     | PID=30301 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-30 23:03:23] 2026-03-31 03:02:48,500 | INFO     | .. there are 3 such processes running
[2026-03-30 23:03:23] 2026-03-31 03:02:49,530 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-30 23:03:23] 2026-03-31 03:02:49,640 | INFO     | job 7072267060 has state=finished
[2026-03-30 23:03:23] 2026-03-31 03:02:49,641 | INFO     | preparing for final server update for job 7072267060 in state='finished'
[2026-03-30 23:03:23] 2026-03-31 03:02:49,641 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7072267060/jobReport.json
[2026-03-30 23:03:23] 2026-03-31 03:02:49,644 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-03-30 23:03:23] 2026-03-31 03:02:49,645 | INFO     | this job has now completed (state=finished)
[2026-03-30 23:03:23] 2026-03-31 03:02:49,645 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-30 23:03:23] 2026-03-31 03:02:49,645 | INFO     | log transfer has been attempted: DONE
[2026-03-30 23:03:23] 2026-03-31 03:02:49,645 | INFO     | job 7072267060 has finished - writing final server update
[2026-03-30 23:03:23] 2026-03-31 03:02:49,646 | INFO     | total number of processed events: 400 (read)
[2026-03-30 23:03:23] 2026-03-31 03:02:49,651 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7072267060/memory_monitor_summary.json (trf name=prmon)
[2026-03-30 23:03:23] 2026-03-31 03:02:49,651 | INFO     | extracted standard info from prmon json
[2026-03-30 23:03:23] 2026-03-31 03:02:49,652 | INFO     | extracted standard memory fields from prmon json
[2026-03-30 23:03:23] 2026-03-31 03:02:49,652 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-30 23:03:23] 2026-03-31 03:02:49,652 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-30 23:03:23] 2026-03-31 03:02:49,657 | INFO     | fitting pss+swap vs Time
[2026-03-30 23:03:23] 2026-03-31 03:02:49,658 | INFO     | sum of square deviations: 1719429448.0
[2026-03-30 23:03:23] 2026-03-31 03:02:49,659 | INFO     | sum of deviations: 23329632328.999996
[2026-03-30 23:03:23] 2026-03-31 03:02:49,659 | INFO     | mean x (centered): 0.0
[2026-03-30 23:03:23] 2026-03-31 03:02:49,660 | INFO     | mean y: 2467874.514124294
[2026-03-30 23:03:23] 2026-03-31 03:02:49,660 | INFO     | intersect: 2467874.514124294
[2026-03-30 23:03:23] 2026-03-31 03:02:49,660 | INFO     | chi2: 1.4226594564721677
[2026-03-30 23:03:23] 2026-03-31 03:02:49,661 | INFO     | sum of square deviations: 1577789583.0
[2026-03-30 23:03:23] 2026-03-31 03:02:49,662 | INFO     | sum of deviations: 22307667121.0
[2026-03-30 23:03:23] 2026-03-31 03:02:49,662 | INFO     | mean x (centered): 0.0
[2026-03-30 23:03:23] 2026-03-31 03:02:49,662 | INFO     | mean y: 2466773.9418604653
[2026-03-30 23:03:23] 2026-03-31 03:02:49,663 | INFO     | intersect: 2466773.9418604653
[2026-03-30 23:03:23] 2026-03-31 03:02:49,663 | INFO     | chi2: 1.4238329085899726
[2026-03-30 23:03:23] 2026-03-31 03:02:49,663 | INFO     | current chi2=1.4238329085899726 (change=-0.08248299425884409 %)
[2026-03-30 23:03:23] 2026-03-31 03:02:49,663 | INFO     | right removable region: 171
[2026-03-30 23:03:23] 2026-03-31 03:02:49,664 | INFO     | sum of square deviations: 1577789583.0
[2026-03-30 23:03:23] 2026-03-31 03:02:49,665 | INFO     | sum of deviations: -1698240640.5000005
[2026-03-30 23:03:23] 2026-03-31 03:02:49,665 | INFO     | mean x (centered): 0.0
[2026-03-30 23:03:23] 2026-03-31 03:02:49,666 | INFO     | mean y: 2494449.9244186045
[2026-03-30 23:03:23] 2026-03-31 03:02:49,666 | INFO     | intersect: 2494449.9244186045
[2026-03-30 23:03:23] 2026-03-31 03:02:49,666 | INFO     | chi2: 0.061700881434233835
[2026-03-30 23:03:23] 2026-03-31 03:02:49,666 | INFO     | current chi2=0.061700881434233835 (change=95.66299010254806 %)
[2026-03-30 23:03:23] 2026-03-31 03:02:49,667 | INFO     | sum of square deviations: 1444149868.0
[2026-03-30 23:03:23] 2026-03-31 03:02:49,668 | INFO     | sum of deviations: -2592982022.0000014
[2026-03-30 23:03:23] 2026-03-31 03:02:49,668 | INFO     | mean x (centered): 0.0
[2026-03-30 23:03:23] 2026-03-31 03:02:49,669 | INFO     | mean y: 2495433.5808383236
[2026-03-30 23:03:23] 2026-03-31 03:02:49,669 | INFO     | intersect: 2495433.5808383236
[2026-03-30 23:03:23] 2026-03-31 03:02:49,669 | INFO     | chi2: 0.05108230848316437
[2026-03-30 23:03:23] 2026-03-31 03:02:49,669 | INFO     | current chi2=0.05108230848316437 (change=17.209758927654324 %)
[2026-03-30 23:03:23] 2026-03-31 03:02:49,670 | INFO     | left removable region: 10
[2026-03-30 23:03:23] 2026-03-31 03:02:49,670 | INFO     | sum of square deviations: 1294014960.0
[2026-03-30 23:03:23] 2026-03-31 03:02:49,671 | INFO     | sum of deviations: -2907306969.9999995
[2026-03-30 23:03:23] 2026-03-31 03:02:49,671 | INFO     | mean x (centered): 0.0
[2026-03-30 23:03:23] 2026-03-31 03:02:49,672 | INFO     | mean y: 2495050.347826087
[2026-03-30 23:03:23] 2026-03-31 03:02:49,672 | INFO     | intersect: 2495050.347826087
[2026-03-30 23:03:23] 2026-03-31 03:02:49,672 | INFO     | chi2: 0.05062643558945246
[2026-03-30 23:03:23] 2026-03-31 03:02:49,673 | INFO     | current memory leak: -2.25 B/s (using 161 data points, chi2=0.05)
[2026-03-30 23:03:23] 2026-03-31 03:02:49,673 | INFO     | could have reported an average CPU frequency of 2538 MHz (9 samples)
[2026-03-30 23:03:23] 2026-03-31 03:02:49,673 | INFO     | ..............................
[2026-03-30 23:03:23] 2026-03-31 03:02:49,673 | INFO     | . Timing measurements:
[2026-03-30 23:03:23] 2026-03-31 03:02:49,674 | INFO     | . get job = 0 s
[2026-03-30 23:03:23] 2026-03-31 03:02:49,674 | INFO     | . initial setup = 5 s
[2026-03-30 23:03:23] 2026-03-31 03:02:49,674 | INFO     | . payload setup = 8 s
[2026-03-30 23:03:23] 2026-03-31 03:02:49,674 | INFO     | . stage-in = 0 s
[2026-03-30 23:03:23] 2026-03-31 03:02:49,674 | INFO     | . payload execution = 10795 s
[2026-03-30 23:03:23] 2026-03-31 03:02:49,674 | INFO     | . stage-out = 2 s
[2026-03-30 23:03:23] 2026-03-31 03:02:49,675 | INFO     | . log creation = 0 s
[2026-03-30 23:03:23] 2026-03-31 03:02:49,675 | INFO     | ..............................
[2026-03-30 23:03:23] 2026-03-31 03:02:50,090 | INFO     | 
[2026-03-30 23:03:23] 2026-03-31 03:02:50,090 | INFO     | job summary report
[2026-03-30 23:03:23] 2026-03-31 03:02:50,090 | INFO     | --------------------------------------------------
[2026-03-30 23:03:23] 2026-03-31 03:02:50,091 | INFO     | PanDA job id: 7072267060
[2026-03-30 23:03:23] 2026-03-31 03:02:50,091 | INFO     | task id: 49263191
[2026-03-30 23:03:23] 2026-03-31 03:02:50,091 | INFO     | errors: (none)
[2026-03-30 23:03:23] 2026-03-31 03:02:50,091 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-30 23:03:23] 2026-03-31 03:02:50,091 | INFO     | pilot state: finished 
[2026-03-30 23:03:23] 2026-03-31 03:02:50,091 | INFO     | transexitcode: 0
[2026-03-30 23:03:23] 2026-03-31 03:02:50,092 | INFO     | exeerrorcode: 0
[2026-03-30 23:03:23] 2026-03-31 03:02:50,092 | INFO     | exeerrordiag: 
[2026-03-30 23:03:23] 2026-03-31 03:02:50,092 | INFO     | exitcode: 0
[2026-03-30 23:03:23] 2026-03-31 03:02:50,092 | INFO     | exitmsg: OK
[2026-03-30 23:03:23] 2026-03-31 03:02:50,092 | INFO     | cpuconsumptiontime: 80892 s
[2026-03-30 23:03:23] 2026-03-31 03:02:50,092 | INFO     | nevents: 400
[2026-03-30 23:03:23] 2026-03-31 03:02:50,093 | INFO     | neventsw: 0
[2026-03-30 23:03:23] 2026-03-31 03:02:50,093 | INFO     | pid: 2359
[2026-03-30 23:03:23] 2026-03-31 03:02:50,093 | INFO     | pgrp: 2359
[2026-03-30 23:03:23] 2026-03-31 03:02:50,093 | INFO     | corecount: 8
[2026-03-30 23:03:23] 2026-03-31 03:02:50,093 | INFO     | event service: False
[2026-03-30 23:03:23] 2026-03-31 03:02:50,093 | INFO     | sizes: {0: 2279788, 1: 2281617, 2: 2281617, 10807: 2310576, 10810: 2319602, 10813: 2320044}
[2026-03-30 23:03:23] 2026-03-31 03:02:50,094 | INFO     | --------------------------------------------------
[2026-03-30 23:03:23] 2026-03-31 03:02:50,094 | INFO     | 
[2026-03-30 23:03:23] 2026-03-31 03:02:50,094 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-30 23:03:23] 2026-03-31 03:02:50,112 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,113 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,113 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,113 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,113 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,113 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,113 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,114 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,114 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,114 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,114 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,115 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,115 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,115 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,115 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,115 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-30 23:03:23] 2026-03-31 03:02:50,116 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,116 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-30 23:03:23] 2026-03-31 03:02:50,116 | INFO     | job 7072267060 has completed (purged errors)
[2026-03-30 23:03:23] 2026-03-31 03:02:50,116 | INFO     | overall cleanup function is called
[2026-03-30 23:03:23] 2026-03-31 03:02:51,124 | INFO     | --- collectZombieJob: --- 10, [2359]
[2026-03-30 23:03:23] 2026-03-31 03:02:51,124 | INFO     | zombie collector waiting for pid 2359
[2026-03-30 23:03:23] 2026-03-31 03:02:51,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-30 23:03:23] 2026-03-31 03:02:51,124 | INFO     | collected zombie processes
[2026-03-30 23:03:23] 2026-03-31 03:02:51,125 | INFO     | will attempt to kill all subprocesses of pid=2359
[2026-03-30 23:03:23] 2026-03-31 03:02:51,244 | INFO     | process IDs to be killed: [2359] (in reverse order)
[2026-03-30 23:03:23] 2026-03-31 03:02:51,286 | WARNING  | found no corresponding commands to process id(s)
[2026-03-30 23:03:23] 2026-03-31 03:02:51,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-30 23:03:23] 2026-03-31 03:02:51,288 | INFO     | did not find any defunct processes belonging to 2359
[2026-03-30 23:03:23] 2026-03-31 03:02:51,291 | INFO     | did not find any defunct processes belonging to 2359
[2026-03-30 23:03:23] 2026-03-31 03:02:51,291 | INFO     | Ready for new job
[2026-03-30 23:03:23] 2026-03-31 03:02:51,292 | INFO     | **************************************
[2026-03-30 23:03:23] 2026-03-31 03:02:51,292 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-30 23:03:23] 2026-03-31 03:02:51,292 | INFO     | **************************************
[2026-03-30 23:03:23] 2026-03-31 03:02:51,292 | INFO     | 
[2026-03-30 23:03:23] 2026-03-31 03:02:51,293 | INFO     | architecture information:
[2026-03-30 23:03:23] 2026-03-31 03:02:51,294 | INFO     | executing command: cat /etc/os-release
[2026-03-30 23:03:23] 2026-03-31 03:02:51,305 | INFO     | cat /etc/os-release:
[2026-03-30 23:03:23] NAME="CentOS Linux"
[2026-03-30 23:03:23] VERSION="7 (Core)"
[2026-03-30 23:03:23] ID="centos"
[2026-03-30 23:03:23] ID_LIKE="rhel fedora"
[2026-03-30 23:03:23] VERSION_ID="7"
[2026-03-30 23:03:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-30 23:03:23] ANSI_COLOR="0;31"
[2026-03-30 23:03:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-30 23:03:23] HOME_URL="https://www.centos.org/"
[2026-03-30 23:03:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-30 23:03:23] 
[2026-03-30 23:03:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-30 23:03:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-30 23:03:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-30 23:03:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-30 23:03:23] 
[2026-03-30 23:03:23] 2026-03-31 03:02:51,305 | INFO     | **************************************
[2026-03-30 23:03:23] 2026-03-31 03:02:51,808 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-30 23:03:23] 2026-03-31 03:02:51,823 | INFO     | sufficient remaining disk space (28006416384 B)
[2026-03-30 23:03:23] 2026-03-31 03:02:51,823 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-30 23:03:23] 2026-03-31 03:02:51,823 | INFO     | current server update state: UPDATING_FINAL
[2026-03-30 23:03:23] 2026-03-31 03:02:51,823 | INFO     | update_server=False
[2026-03-30 23:03:23] 2026-03-31 03:02:51,823 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-30 23:03:23] 2026-03-31 03:02:51,824 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-30 23:03:23] 2026-03-31 03:02:51,824 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-30 23:03:23] 2026-03-31 03:02:51,824 | INFO     | aborting loop
[2026-03-30 23:03:23] 2026-03-31 03:02:51,842 | INFO     | [monitor] cgroup control has ended
[2026-03-30 23:03:23] 2026-03-31 03:02:52,450 | INFO     | all payload control threads have been joined
[2026-03-30 23:03:23] 2026-03-31 03:02:52,619 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-30 23:03:23] 2026-03-31 03:02:52,730 | INFO     | all data control threads have been joined
[2026-03-30 23:03:23] 2026-03-31 03:02:52,743 | INFO     | all job control threads have been joined
[2026-03-30 23:03:23] 2026-03-31 03:02:52,826 | INFO     | [job] retrieve thread has finished
[2026-03-30 23:03:23] 2026-03-31 03:02:52,829 | INFO     | [job] job monitor thread has finished
[2026-03-30 23:03:23] 2026-03-31 03:02:53,255 | INFO     | [job] create_data_payload thread has finished
[2026-03-30 23:03:23] 2026-03-31 03:02:53,459 | INFO     | [payload] control thread has finished
[2026-03-30 23:03:23] 2026-03-31 03:02:53,577 | INFO     | [payload] validate_pre thread has finished
[2026-03-30 23:03:23] 2026-03-31 03:02:53,625 | INFO     | [job] validate thread has finished
[2026-03-30 23:03:23] 2026-03-31 03:02:53,631 | INFO     | [payload] execute_payloads thread has finished
[2026-03-30 23:03:23] 2026-03-31 03:02:53,736 | INFO     | [data] control thread has finished
[2026-03-30 23:03:23] 2026-03-31 03:02:53,748 | INFO     | [job] control thread has finished
[2026-03-30 23:03:23] 2026-03-31 03:02:53,902 | INFO     | [data] copytool_in thread has finished
[2026-03-30 23:03:23] 2026-03-31 03:02:54,091 | INFO     | [payload] failed_post thread has finished
[2026-03-30 23:03:23] 2026-03-31 03:02:54,368 | INFO     | [payload] validate_post thread has finished
[2026-03-30 23:03:23] 2026-03-31 03:02:54,624 | INFO     | [data] copytool_out thread has finished
[2026-03-30 23:03:23] 2026-03-31 03:02:54,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-30 23:03:23] 2026-03-31 03:02:55,828 | INFO     | [job] queue monitor thread has finished
[2026-03-30 23:03:23] 2026-03-31 03:02:55,829 | INFO     | [data] queue_monitor thread has finished
[2026-03-30 23:03:23] 2026-03-31 03:03:02,422 | INFO     | job.realtimelogging is not enabled
[2026-03-30 23:03:23] 2026-03-31 03:03:03,428 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-30 23:03:23] 2026-03-31 03:03:04,841 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139780219144000)>', '<ExcThread(monitor, started 139779509319424)>']
[2026-03-30 23:03:23] 2026-03-31 03:03:09,852 | INFO     | all workflow threads have been joined
[2026-03-30 23:03:23] 2026-03-31 03:03:09,852 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-30 23:03:23] 2026-03-31 03:03:09,853 | INFO     | traces error code: 0
[2026-03-30 23:03:23] 2026-03-31 03:03:09,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-30 23:03:23] 2026-03-31 03:03:22,747 | INFO     | PID=30301 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-30 23:03:23] 2026-03-31 03:03:22,748 | INFO     | .. there are 3 such processes running
[2026-03-30 23:03:23] 2026-03-31 03:03:22,748 | INFO     | found 0 job(s) in 20 queues
[2026-03-30 23:03:23] 2026-03-31 03:03:22,749 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-30 23:03:23] 2026-03-31 03:03:22,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-30 23:03:23] 2026-03-31 03:03:22,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-30 23:03:23] 2026-03-31 03:03:22,749 | INFO     | [monitor] control thread has ended
[2026-03-30 23:03:23] 2026-03-31 03:03:22,874 [wrapper] ==== pilot stdout END ====
[2026-03-30 23:03:23] 2026-03-31 03:03:22,876 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-30 23:03:23] 2026-03-31 03:03:22,879 [wrapper] pilotpid: 30301
[2026-03-30 23:03:23] 2026-03-31 03:03:22,882 [wrapper] Pilot exit status: 0
[2026-03-30 23:03:23] 2026-03-31 03:03:22,892 [wrapper] pandaids: 7072267060
[2026-03-30 23:03:23] 2026-03-31 03:03:22,924 [wrapper] cleanup supervisor_pilot  7928 30302
[2026-03-30 23:03:23] 2026-03-31 03:03:22,926 [wrapper] Test setup, not cleaning
[2026-03-30 23:03:23] 2026-03-31 03:03:22,928 [wrapper] apfmon messages muted
[2026-03-30 23:03:23] 2026-03-31 03:03:22,931 [wrapper] ==== wrapper stdout END ====
[2026-03-30 23:03:23] 2026-03-31 03:03:22,933 [wrapper] ==== wrapper stderr END ====
[2026-03-30 23:03:23]  *** Error codes and diagnostics ***
[2026-03-30 23:03:23]     "exeErrorCode": 0,
[2026-03-30 23:03:23]     "pilotErrorCode": 0,
[2026-03-30 23:03:23]  *** Listing of results directory ***
[2026-03-30 23:03:23] total 414224
[2026-03-30 23:03:23] -rw-r--r-- 1 boincer umatlas      5118 Mar 30 17:19 queuedata.json
[2026-03-30 23:03:23] -rw-r--r-- 1 boincer umatlas    644034 Mar 30 17:19 pilot3.tar.gz
[2026-03-30 23:03:23] -rwx------ 1 boincer umatlas     36322 Mar 30 17:20 runpilot2-wrapper.sh
[2026-03-30 23:03:23] -rw-r--r-- 1 boincer umatlas       100 Mar 30 20:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-30 23:03:23] -rwxr-xr-x 1 boincer umatlas      7986 Mar 30 20:02 run_atlas
[2026-03-30 23:03:23] -rw-r--r-- 1 boincer umatlas       105 Mar 30 20:02 job.xml
[2026-03-30 23:03:23] -rw-r--r-- 2 boincer umatlas 221577408 Mar 30 20:02 EVNT.49263189._000401.pool.root.1
[2026-03-30 23:03:23] -rw-r--r-- 2 boincer umatlas     15845 Mar 30 20:02 start_atlas.sh
[2026-03-30 23:03:23] drwxrwx--x 2 boincer umatlas      4096 Mar 30 20:02 shared
[2026-03-30 23:03:23] -rw-r--r-- 2 boincer umatlas    656744 Mar 30 20:02 input.tar.gz
[2026-03-30 23:03:23] -rw-r--r-- 1 boincer umatlas         0 Mar 30 20:02 boinc_lockfile
[2026-03-30 23:03:23] -rw-r--r-- 1 boincer umatlas      2575 Mar 30 20:02 pandaJob.out
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas        57 Mar 30 20:02 setup.sh.local
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas   1004000 Mar 30 20:02 agis_schedconf.cvmfs.json
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas       445 Mar 30 20:02 workernode_map.json
[2026-03-30 23:03:23] drwx------ 5 boincer umatlas      4096 Mar 30 20:02 pilot3
[2026-03-30 23:03:23] -rw-r--r-- 1 boincer umatlas      5952 Mar 30 23:01 init_data.xml
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas 195751414 Mar 30 23:02 HITS.49263191._009399.pool.root.1
[2026-03-30 23:03:23] -rw-r--r-- 1 boincer umatlas       530 Mar 30 23:02 boinc_task_state.xml
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas      1054 Mar 30 23:02 memory_monitor_summary.json
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas   1511579 Mar 30 23:02 agis_ddmendpoints.agis.ALL.json
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas    380032 Mar 30 23:02 log.49263191._009399.job.log.tgz.1
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas      6441 Mar 30 23:02 heartbeat_new.json
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas      6332 Mar 30 23:02 heartbeat.json
[2026-03-30 23:03:23] -rw-r--r-- 1 boincer umatlas      8192 Mar 30 23:03 boinc_mmap_file
[2026-03-30 23:03:23] -rw-r--r-- 1 boincer umatlas        28 Mar 30 23:03 wrapper_checkpoint.txt
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas        95 Mar 30 23:03 pilot_heartbeat.json
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas       820 Mar 30 23:03 pilotlog.txt
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas   1006220 Mar 30 23:03 log.49263191._009399.job.log.1
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas       357 Mar 30 23:03 output.list
[2026-03-30 23:03:23] -rw-r--r-- 1 boincer umatlas       620 Mar 30 23:03 runtime_log
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas   1402880 Mar 30 23:03 result.tar.gz
[2026-03-30 23:03:23] -rw-r--r-- 1 boincer umatlas      9342 Mar 30 23:03 runtime_log.err
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas       662 Mar 30 23:03 ns6KDm4CZR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmIyOKDmko9LIn.diag
[2026-03-30 23:03:23] -rw-r--r-- 1 boincer umatlas     21229 Mar 30 23:03 stderr.txt
[2026-03-30 23:03:23] HITS file was successfully produced:
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas 195751414 Mar 30 23:02 shared/HITS.pool.root.1
[2026-03-30 23:03:23]  *** Contents of shared directory: ***
[2026-03-30 23:03:23] total 409588
[2026-03-30 23:03:23] -rw-r--r-- 2 boincer umatlas 221577408 Mar 30 20:02 ATLAS.root_0
[2026-03-30 23:03:23] -rw-r--r-- 2 boincer umatlas     15845 Mar 30 20:02 start_atlas.sh
[2026-03-30 23:03:23] -rw-r--r-- 2 boincer umatlas    656744 Mar 30 20:02 input.tar.gz
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas 195751414 Mar 30 23:02 HITS.pool.root.1
[2026-03-30 23:03:23] -rw------- 1 boincer umatlas   1402880 Mar 30 23:03 result.tar.gz
23:03:24 (26318): run_atlas exited; CPU time 81031.607178
23:03:24 (26318): called boinc_finish(0)

</stderr_txt>
]]>

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