Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:27:07 (27977): wrapper (7.7.26015): starting
10:27:07 (27977): wrapper: running run_atlas (--nthreads 8)
[2026-03-31 10:27:07] Arguments: --nthreads 8
[2026-03-31 10:27:07] Threads: 8
[2026-03-31 10:27:07] Checking for CVMFS
[2026-03-31 10:27:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 10:27:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 10:27:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 10:27:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 10:27:11] 2.11.2.0 21086 151812 137928 157913 2 53 24656589 25165825 4838 130560 159 45262903 99.851 29151504 965 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-31 10:27:11] CVMFS is ok
[2026-03-31 10:27:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 10:27:11] Checking for apptainer binary...
[2026-03-31 10:27:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 10:27:11] Running /usr/bin/apptainer --version
[2026-03-31 10:27:11] apptainer version 1.3.2-1.el7
[2026-03-31 10:27:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 10:27:32] cg-vwn408.simple-grid.lan
[2026-03-31 10:27:32] apptainer works
[2026-03-31 10:27:32] Set ATHENA_PROC_NUMBER=8
[2026-03-31 10:27:32] Set ATHENA_CORE_NUMBER=8
[2026-03-31 10:27:32] Starting ATLAS job with PandaID=7072265712
[2026-03-31 10:27:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 14:42:25]  *** The last 200 lines of the pilot log: ***
[2026-03-31 14:42:25] 2026-03-31 12:41:25,829 | INFO     | total number of processed events: 400 (read)
[2026-03-31 14:42:25] 2026-03-31 12:41:25,831 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7072265712/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 14:42:25] 2026-03-31 12:41:25,832 | INFO     | extracted standard info from prmon json
[2026-03-31 14:42:25] 2026-03-31 12:41:25,832 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 14:42:25] 2026-03-31 12:41:25,832 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 14:42:25] 2026-03-31 12:41:25,832 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 14:42:25] 2026-03-31 12:41:25,838 | INFO     | fitting pss+swap vs Time
[2026-03-31 14:42:25] 2026-03-31 12:41:25,838 | INFO     | sum of square deviations: 4286517580.0
[2026-03-31 14:42:25] 2026-03-31 12:41:25,841 | INFO     | sum of deviations: 81432508363.5
[2026-03-31 14:42:25] 2026-03-31 12:41:25,841 | INFO     | mean x (centered): 0.0
[2026-03-31 14:42:25] 2026-03-31 12:41:25,841 | INFO     | mean y: 2447542.1791666667
[2026-03-31 14:42:25] 2026-03-31 12:41:25,841 | INFO     | intersect: 2447542.1791666667
[2026-03-31 14:42:25] 2026-03-31 12:41:25,842 | INFO     | chi2: 7.635804802033184
[2026-03-31 14:42:25] 2026-03-31 12:41:25,842 | INFO     | sum of square deviations: 4024149870.0
[2026-03-31 14:42:25] 2026-03-31 12:41:25,844 | INFO     | sum of deviations: 95375207573.0
[2026-03-31 14:42:25] 2026-03-31 12:41:25,845 | INFO     | mean x (centered): 0.0
[2026-03-31 14:42:25] 2026-03-31 12:41:25,845 | INFO     | mean y: 2455490.093617021
[2026-03-31 14:42:25] 2026-03-31 12:41:25,845 | INFO     | intersect: 2455490.093617021
[2026-03-31 14:42:25] 2026-03-31 12:41:25,845 | INFO     | chi2: 6.941818861822204
[2026-03-31 14:42:25] 2026-03-31 12:41:25,846 | INFO     | current chi2=6.941818861822204 (change=9.088576230054917 %)
[2026-03-31 14:42:25] 2026-03-31 12:41:25,846 | INFO     | right removable region: 234
[2026-03-31 14:42:25] 2026-03-31 12:41:25,846 | INFO     | sum of square deviations: 4024149870.0
[2026-03-31 14:42:25] 2026-03-31 12:41:25,848 | INFO     | sum of deviations: -3179040498.0000076
[2026-03-31 14:42:25] 2026-03-31 12:41:25,848 | INFO     | mean x (centered): 0.0
[2026-03-31 14:42:25] 2026-03-31 12:41:25,849 | INFO     | mean y: 2496692.9617021275
[2026-03-31 14:42:25] 2026-03-31 12:41:25,849 | INFO     | intersect: 2496692.9617021275
[2026-03-31 14:42:25] 2026-03-31 12:41:25,849 | INFO     | chi2: 2.597486905430296
[2026-03-31 14:42:25] 2026-03-31 12:41:25,849 | INFO     | current chi2=2.597486905430296 (change=65.98280112217296 %)
[2026-03-31 14:42:25] 2026-03-31 12:41:25,850 | INFO     | sum of square deviations: 3772712597.5
[2026-03-31 14:42:25] 2026-03-31 12:41:25,852 | INFO     | sum of deviations: -46756102676.50001
[2026-03-31 14:42:25] 2026-03-31 12:41:25,852 | INFO     | mean x (centered): 0.0
[2026-03-31 14:42:25] 2026-03-31 12:41:25,853 | INFO     | mean y: 2522959.3
[2026-03-31 14:42:25] 2026-03-31 12:41:25,853 | INFO     | intersect: 2522959.3
[2026-03-31 14:42:25] 2026-03-31 12:41:25,853 | INFO     | chi2: 0.9884387831213188
[2026-03-31 14:42:25] 2026-03-31 12:41:25,854 | INFO     | current chi2=0.9884387831213188 (change=61.94634201793693 %)
[2026-03-31 14:42:25] 2026-03-31 12:41:25,854 | INFO     | sum of square deviations: 3531973200.0
[2026-03-31 14:42:25] 2026-03-31 12:41:25,856 | INFO     | sum of deviations: -47290377429.000015
[2026-03-31 14:42:25] 2026-03-31 12:41:25,856 | INFO     | mean x (centered): 0.0
[2026-03-31 14:42:25] 2026-03-31 12:41:25,856 | INFO     | mean y: 2523258.942222222
[2026-03-31 14:42:25] 2026-03-31 12:41:25,856 | INFO     | intersect: 2523258.942222222
[2026-03-31 14:42:25] 2026-03-31 12:41:25,857 | INFO     | chi2: 0.9656943625126424
[2026-03-31 14:42:25] 2026-03-31 12:41:25,857 | INFO     | current chi2=0.9656943625126424 (change=2.3010449404720323 %)
[2026-03-31 14:42:25] 2026-03-31 12:41:25,857 | INFO     | left removable region: 15
[2026-03-31 14:42:25] 2026-03-31 12:41:25,857 | INFO     | sum of square deviations: 3256879670.0
[2026-03-31 14:42:25] 2026-03-31 12:41:25,859 | INFO     | sum of deviations: -31496930563.999992
[2026-03-31 14:42:25] 2026-03-31 12:41:25,859 | INFO     | mean x (centered): 0.0
[2026-03-31 14:42:25] 2026-03-31 12:41:25,860 | INFO     | mean y: 2533542.5570776258
[2026-03-31 14:42:25] 2026-03-31 12:41:25,860 | INFO     | intersect: 2533542.5570776258
[2026-03-31 14:42:25] 2026-03-31 12:41:25,860 | INFO     | chi2: 0.18059201448471562
[2026-03-31 14:42:25] 2026-03-31 12:41:25,860 | INFO     | current memory leak: -9.67 B/s (using 219 data points, chi2=0.18)
[2026-03-31 14:42:25] 2026-03-31 12:41:25,861 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-03-31 14:42:25] 2026-03-31 12:41:25,861 | INFO     | ..............................
[2026-03-31 14:42:25] 2026-03-31 12:41:25,861 | INFO     | . Timing measurements:
[2026-03-31 14:42:25] 2026-03-31 12:41:25,861 | INFO     | . get job = 0 s
[2026-03-31 14:42:25] 2026-03-31 12:41:25,862 | INFO     | . initial setup = 105 s
[2026-03-31 14:42:25] 2026-03-31 12:41:25,862 | INFO     | . payload setup = 161 s
[2026-03-31 14:42:25] 2026-03-31 12:41:25,862 | INFO     | . stage-in = 0 s
[2026-03-31 14:42:25] 2026-03-31 12:41:25,862 | INFO     | . payload execution = 14730 s
[2026-03-31 14:42:25] 2026-03-31 12:41:25,862 | INFO     | . stage-out = 3 s
[2026-03-31 14:42:25] 2026-03-31 12:41:25,862 | INFO     | . log creation = 1 s
[2026-03-31 14:42:25] 2026-03-31 12:41:25,862 | INFO     | ..............................
[2026-03-31 14:42:25] 2026-03-31 12:41:25,952 | INFO     | PID=32078 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-31 14:42:25] 2026-03-31 12:41:25,952 | INFO     | .. there are 9 such processes running
[2026-03-31 14:42:25] 2026-03-31 12:41:26,060 | INFO     | 
[2026-03-31 14:42:25] 2026-03-31 12:41:26,060 | INFO     | job summary report
[2026-03-31 14:42:25] 2026-03-31 12:41:26,060 | INFO     | --------------------------------------------------
[2026-03-31 14:42:25] 2026-03-31 12:41:26,060 | INFO     | PanDA job id: 7072265712
[2026-03-31 14:42:25] 2026-03-31 12:41:26,061 | INFO     | task id: 49263208
[2026-03-31 14:42:25] 2026-03-31 12:41:26,061 | INFO     | errors: (none)
[2026-03-31 14:42:25] 2026-03-31 12:41:26,061 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 14:42:25] 2026-03-31 12:41:26,061 | INFO     | pilot state: finished 
[2026-03-31 14:42:25] 2026-03-31 12:41:26,061 | INFO     | transexitcode: 0
[2026-03-31 14:42:25] 2026-03-31 12:41:26,061 | INFO     | exeerrorcode: 0
[2026-03-31 14:42:25] 2026-03-31 12:41:26,064 | INFO     | exeerrordiag: 
[2026-03-31 14:42:25] 2026-03-31 12:41:26,064 | INFO     | exitcode: 0
[2026-03-31 14:42:25] 2026-03-31 12:41:26,064 | INFO     | exitmsg: OK
[2026-03-31 14:42:25] 2026-03-31 12:41:26,064 | INFO     | cpuconsumptiontime: 56664 s
[2026-03-31 14:42:25] 2026-03-31 12:41:26,065 | INFO     | nevents: 400
[2026-03-31 14:42:25] 2026-03-31 12:41:26,065 | INFO     | neventsw: 0
[2026-03-31 14:42:25] 2026-03-31 12:41:26,065 | INFO     | pid: 4228
[2026-03-31 14:42:25] 2026-03-31 12:41:26,065 | INFO     | pgrp: 4228
[2026-03-31 14:42:25] 2026-03-31 12:41:26,065 | INFO     | corecount: 8
[2026-03-31 14:42:25] 2026-03-31 12:41:26,065 | INFO     | event service: False
[2026-03-31 14:42:25] 2026-03-31 12:41:26,065 | INFO     | sizes: {0: 2279790, 1: 2249634, 2: 2281619, 12: 2281647, 14897: 2312478, 14900: 2321476, 14904: 2321854}
[2026-03-31 14:42:25] 2026-03-31 12:41:26,065 | INFO     | --------------------------------------------------
[2026-03-31 14:42:25] 2026-03-31 12:41:26,065 | INFO     | 
[2026-03-31 14:42:25] 2026-03-31 12:41:26,065 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-31 14:42:25] 2026-03-31 12:41:26,547 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,547 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,547 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,547 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,549 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 14:42:25] 2026-03-31 12:41:26,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,549 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 14:42:25] 2026-03-31 12:41:26,550 | INFO     | job 7072265712 has completed (purged errors)
[2026-03-31 14:42:25] 2026-03-31 12:41:26,550 | INFO     | overall cleanup function is called
[2026-03-31 14:42:25] 2026-03-31 12:41:27,558 | INFO     | --- collectZombieJob: --- 10, [4228]
[2026-03-31 14:42:25] 2026-03-31 12:41:27,558 | INFO     | zombie collector waiting for pid 4228
[2026-03-31 14:42:25] 2026-03-31 12:41:27,558 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 14:42:25] 2026-03-31 12:41:27,559 | INFO     | collected zombie processes
[2026-03-31 14:42:25] 2026-03-31 12:41:27,559 | INFO     | will attempt to kill all subprocesses of pid=4228
[2026-03-31 14:42:25] 2026-03-31 12:41:27,670 | INFO     | process IDs to be killed: [4228] (in reverse order)
[2026-03-31 14:42:25] 2026-03-31 12:41:28,602 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 14:42:25] 2026-03-31 12:41:28,602 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 14:42:25] 2026-03-31 12:41:28,605 | INFO     | did not find any defunct processes belonging to 4228
[2026-03-31 14:42:25] 2026-03-31 12:41:28,608 | INFO     | did not find any defunct processes belonging to 4228
[2026-03-31 14:42:25] 2026-03-31 12:41:28,609 | INFO     | Ready for new job
[2026-03-31 14:42:25] 2026-03-31 12:41:28,610 | INFO     | **************************************
[2026-03-31 14:42:25] 2026-03-31 12:41:28,611 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 14:42:25] 2026-03-31 12:41:28,611 | INFO     | **************************************
[2026-03-31 14:42:25] 2026-03-31 12:41:28,611 | INFO     | 
[2026-03-31 14:42:25] 2026-03-31 12:41:28,611 | INFO     | pilot is running in a VM
[2026-03-31 14:42:25] 2026-03-31 12:41:28,612 | INFO     | architecture information:
[2026-03-31 14:42:25] 2026-03-31 12:41:28,620 | INFO     | executing command: cat /etc/os-release
[2026-03-31 14:42:25] 2026-03-31 12:41:28,816 | INFO     | cat /etc/os-release:
[2026-03-31 14:42:25] NAME="CentOS Linux"
[2026-03-31 14:42:25] VERSION="7 (Core)"
[2026-03-31 14:42:25] ID="centos"
[2026-03-31 14:42:25] ID_LIKE="rhel fedora"
[2026-03-31 14:42:25] VERSION_ID="7"
[2026-03-31 14:42:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 14:42:25] ANSI_COLOR="0;31"
[2026-03-31 14:42:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 14:42:25] HOME_URL="https://www.centos.org/"
[2026-03-31 14:42:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 14:42:25] 
[2026-03-31 14:42:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 14:42:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 14:42:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 14:42:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 14:42:25] 
[2026-03-31 14:42:25] 2026-03-31 12:41:28,816 | INFO     | **************************************
[2026-03-31 14:42:25] 2026-03-31 12:41:29,319 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-31 14:42:25] 2026-03-31 12:41:29,488 | INFO     | sufficient remaining disk space (496460890112 B)
[2026-03-31 14:42:25] 2026-03-31 12:41:29,488 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 14:42:25] 2026-03-31 12:41:29,488 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 14:42:25] 2026-03-31 12:41:29,489 | INFO     | update_server=False
[2026-03-31 14:42:25] 2026-03-31 12:41:29,489 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 14:42:25] 2026-03-31 12:41:29,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 14:42:25] 2026-03-31 12:41:29,490 | INFO     | aborting loop
[2026-03-31 14:42:25] 2026-03-31 12:41:30,282 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 14:42:25] 2026-03-31 12:41:30,419 | INFO     | all payload control threads have been joined
[2026-03-31 14:42:25] 2026-03-31 12:41:30,494 | INFO     | [job] retrieve thread has finished
[2026-03-31 14:42:25] 2026-03-31 12:41:30,495 | INFO     | [job] job monitor thread has finished
[2026-03-31 14:42:25] 2026-03-31 12:41:30,541 | INFO     | all data control threads have been joined
[2026-03-31 14:42:25] 2026-03-31 12:41:30,608 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 14:42:25] 2026-03-31 12:41:30,713 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 14:42:25] 2026-03-31 12:41:30,742 | INFO     | [data] copytool_in thread has finished
[2026-03-31 14:42:25] 2026-03-31 12:41:30,820 | INFO     | [payload] validate_post thread has finished
[2026-03-31 14:42:25] 2026-03-31 12:41:31,082 | INFO     | all job control threads have been joined
[2026-03-31 14:42:25] 2026-03-31 12:41:31,085 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 14:42:25] 2026-03-31 12:41:31,146 | INFO     | [job] validate thread has finished
[2026-03-31 14:42:25] 2026-03-31 12:41:31,397 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 14:42:25] 2026-03-31 12:41:31,425 | INFO     | [payload] control thread has finished
[2026-03-31 14:42:25] 2026-03-31 12:41:31,547 | INFO     | [data] control thread has finished
[2026-03-31 14:42:25] 2026-03-31 12:41:31,549 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 14:42:25] 2026-03-31 12:41:31,925 | INFO     | [payload] failed_post thread has finished
[2026-03-31 14:42:25] 2026-03-31 12:41:32,088 | INFO     | [job] control thread has finished
[2026-03-31 14:42:25] 2026-03-31 12:41:32,091 | INFO     | [job] queue monitor thread has finished
[2026-03-31 14:42:25] 2026-03-31 12:41:32,289 | INFO     | [data] copytool_out thread has finished
[2026-03-31 14:42:25] 2026-03-31 12:41:35,406 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 14:42:25] 2026-03-31 12:41:39,649 | INFO     | job.realtimelogging is not enabled
[2026-03-31 14:42:25] 2026-03-31 12:41:40,655 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 14:42:25] 2026-03-31 12:41:56,981 | INFO     | 15023s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-31 14:42:25] 2026-03-31 12:41:58,129 | INFO     | PID=32078 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-31 14:42:25] 2026-03-31 12:41:58,129 | INFO     | .. there are 9 such processes running
[2026-03-31 14:42:25] 2026-03-31 12:41:58,130 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 14:42:25] 2026-03-31 12:41:58,130 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 14:42:25] 2026-03-31 12:41:58,130 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 14:42:25] 2026-03-31 12:42:14,532 | INFO     | [monitor] cgroup control has ended
[2026-03-31 14:42:25] 2026-03-31 12:42:15,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140386658658112)>', '<ExcThread(monitor, started 140386198595328)>']
[2026-03-31 14:42:25] 2026-03-31 12:42:16,240 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 14:42:25] 2026-03-31 12:42:16,240 | INFO     | [monitor] control thread has ended
[2026-03-31 14:42:25] 2026-03-31 12:42:20,401 | INFO     | all workflow threads have been joined
[2026-03-31 14:42:25] 2026-03-31 12:42:20,401 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 14:42:25] 2026-03-31 12:42:20,402 | INFO     | traces error code: 0
[2026-03-31 14:42:25] 2026-03-31 12:42:20,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 14:42:25] 2026-03-31 12:42:20,943 [wrapper] ==== pilot stdout END ====
[2026-03-31 14:42:25] 2026-03-31 12:42:21,045 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 14:42:25] 2026-03-31 12:42:21,111 [wrapper] pilotpid: 32078
[2026-03-31 14:42:25] 2026-03-31 12:42:21,210 [wrapper] Pilot exit status: 0
[2026-03-31 14:42:25] 2026-03-31 12:42:21,688 [wrapper] pandaids: 7072265712
[2026-03-31 14:42:25] 2026-03-31 12:42:22,459 [wrapper] cleanup supervisor_pilot 12486 32079
[2026-03-31 14:42:25] 2026-03-31 12:42:22,550 [wrapper] Test setup, not cleaning
[2026-03-31 14:42:25] 2026-03-31 12:42:22,644 [wrapper] apfmon messages muted
[2026-03-31 14:42:25] 2026-03-31 12:42:22,740 [wrapper] ==== wrapper stdout END ====
[2026-03-31 14:42:25] 2026-03-31 12:42:22,826 [wrapper] ==== wrapper stderr END ====
[2026-03-31 14:42:25]  *** Error codes and diagnostics ***
[2026-03-31 14:42:25]     "exeErrorCode": 0,
[2026-03-31 14:42:25]     "pilotErrorCode": 0,
[2026-03-31 14:42:25]  *** Listing of results directory ***
[2026-03-31 14:42:25] total 417540
[2026-03-31 14:42:25] -rw-r--r--. 1 boinc boinc    644034 Mar 30 22:07 pilot3.tar.gz
[2026-03-31 14:42:25] -rwx------. 1 boinc boinc     36322 Mar 30 22:10 runpilot2-wrapper.sh
[2026-03-31 14:42:25] -rw-r--r--. 1 boinc boinc      5118 Mar 30 22:13 queuedata.json
[2026-03-31 14:42:25] -rw-r--r--. 1 boinc boinc       100 Mar 31 10:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 14:42:25] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 10:27 run_atlas
[2026-03-31 14:42:25] -rw-r--r--. 1 boinc boinc       105 Mar 31 10:27 job.xml
[2026-03-31 14:42:25] -rw-r--r--. 2 boinc boinc 223412952 Mar 31 10:27 EVNT.49263206._000449.pool.root.1
[2026-03-31 14:42:25] drwxrwx--x. 2 boinc boinc        68 Mar 31 10:27 shared
[2026-03-31 14:42:25] -rw-r--r--. 2 boinc boinc    656757 Mar 31 10:27 input.tar.gz
[2026-03-31 14:42:25] -rw-r--r--. 1 boinc boinc      6391 Mar 31 10:27 init_data.xml
[2026-03-31 14:42:25] -rw-r--r--. 2 boinc boinc     15845 Mar 31 10:27 start_atlas.sh
[2026-03-31 14:42:25] -rw-r--r--. 1 boinc boinc         0 Mar 31 10:27 boinc_lockfile
[2026-03-31 14:42:25] -rw-r--r--. 1 boinc boinc      2575 Mar 31 10:27 pandaJob.out
[2026-03-31 14:42:25] -rw-------. 1 boinc boinc       415 Mar 31 10:32 workernode_map.json
[2026-03-31 14:42:25] -rw-------. 1 boinc boinc   1003225 Mar 31 10:32 agis_schedconf.cvmfs.json
[2026-03-31 14:42:25] drwx------. 5 boinc boinc      4096 Mar 31 10:32 pilot3
[2026-03-31 14:42:25] -rw-------. 1 boinc boinc 196550739 Mar 31 14:40 HITS.49263208._010000.pool.root.1
[2026-03-31 14:42:25] -rw-r--r--. 1 boinc boinc       530 Mar 31 14:40 boinc_task_state.xml
[2026-03-31 14:42:25] -rw-------. 1 boinc boinc      1015 Mar 31 14:41 memory_monitor_summary.json
[2026-03-31 14:42:25] -rw-------. 1 boinc boinc   1511579 Mar 31 14:41 agis_ddmendpoints.agis.ALL.json
[2026-03-31 14:42:25] -rw-------. 1 boinc boinc    413610 Mar 31 14:41 log.49263208._010000.job.log.tgz.1
[2026-03-31 14:42:25] -rw-------. 1 boinc boinc      6340 Mar 31 14:41 heartbeat_new.json
[2026-03-31 14:42:25] -rw-------. 1 boinc boinc      6231 Mar 31 14:41 heartbeat.json
[2026-03-31 14:42:25] -rw-------. 1 boinc boinc        95 Mar 31 14:41 pilot_heartbeat.json
[2026-03-31 14:42:25] -rw-------. 1 boinc boinc      5067 Mar 31 14:42 pilotlog.txt
[2026-03-31 14:42:25] -rw-r--r--. 1 boinc boinc      8192 Mar 31 14:42 boinc_mmap_file
[2026-03-31 14:42:25] -rw-r--r--. 1 boinc boinc        28 Mar 31 14:42 wrapper_checkpoint.txt
[2026-03-31 14:42:25] -rw-------. 1 boinc boinc   1359506 Mar 31 14:42 log.49263208._010000.job.log.1
[2026-03-31 14:42:25] -rw-------. 1 boinc boinc       357 Mar 31 14:42 output.list
[2026-03-31 14:42:25] -rw-r--r--. 1 boinc boinc       620 Mar 31 14:42 runtime_log
[2026-03-31 14:42:25] -rw-------. 1 boinc boinc   1792000 Mar 31 14:42 result.tar.gz
[2026-03-31 14:42:25] -rw-r--r--. 1 boinc boinc      8816 Mar 31 14:42 runtime_log.err
[2026-03-31 14:42:25] -rw-------. 1 boinc boinc       655 Mar 31 14:42 K1xMDm17XR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmQtQKDm8xf0Ro.diag
[2026-03-31 14:42:25] -rw-r--r--. 1 boinc boinc     20702 Mar 31 14:42 stderr.txt
[2026-03-31 14:42:25] HITS file was successfully produced:
[2026-03-31 14:42:25] -rw-------. 1 boinc boinc 196550739 Mar 31 14:40 shared/HITS.pool.root.1
[2026-03-31 14:42:25]  *** Contents of shared directory: ***
[2026-03-31 14:42:25] total 412540
[2026-03-31 14:42:25] -rw-r--r--. 2 boinc boinc 223412952 Mar 31 10:27 ATLAS.root_0
[2026-03-31 14:42:25] -rw-r--r--. 2 boinc boinc    656757 Mar 31 10:27 input.tar.gz
[2026-03-31 14:42:25] -rw-r--r--. 2 boinc boinc     15845 Mar 31 10:27 start_atlas.sh
[2026-03-31 14:42:25] -rw-------. 1 boinc boinc 196550739 Mar 31 14:40 HITS.pool.root.1
[2026-03-31 14:42:25] -rw-------. 1 boinc boinc   1792000 Mar 31 14:42 result.tar.gz
14:42:26 (27977): run_atlas exited; CPU time 56896.607025
14:42:26 (27977): called boinc_finish(0)

</stderr_txt>
]]>

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