Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:48:20 (952660): wrapper (7.7.26015): starting
19:48:20 (952660): wrapper: running run_atlas (--nthreads 8)
[2026-03-30 19:48:20] Arguments: --nthreads 8
[2026-03-30 19:48:20] Threads: 8
[2026-03-30 19:48:20] Checking for CVMFS
[2026-03-30 19:48:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 19:48:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 19:48:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 19:48:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 19:48:22] 2.13.3.0 5545 169949 459576 157900 1 258 16854824 32935937 11215 16776704 0 440484365 99.571 586695782 29166 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-30 19:48:22] CVMFS is ok
[2026-03-30 19:48:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 19:48:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 19:48:23] Further information can be found at the LHC@home message board.
[2026-03-30 19:48:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 19:48:23] Checking for apptainer binary...
[2026-03-30 19:48:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 19:48:23] Running /usr/bin/apptainer --version
[2026-03-30 19:48:23] apptainer version 1.4.5-2.el9
[2026-03-30 19:48:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 19:48:24] c6-1-26-3.aglt2.org
[2026-03-30 19:48:24] apptainer works
[2026-03-30 19:48:24] Set ATHENA_PROC_NUMBER=8
[2026-03-30 19:48:24] Set ATHENA_CORE_NUMBER=8
[2026-03-30 19:48:24] Starting ATLAS job with PandaID=7072265767
[2026-03-30 19:48:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 03:47:04]  *** The last 200 lines of the pilot log: ***
[2026-03-31 03:47:04] 2026-03-31 07:45:58,034 | INFO     | job 7072265767 has state=finished
[2026-03-31 03:47:04] 2026-03-31 07:45:58,035 | INFO     | preparing for final server update for job 7072265767 in state='finished'
[2026-03-31 03:47:04] 2026-03-31 07:45:58,035 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7072265767/jobReport.json
[2026-03-31 03:47:04] 2026-03-31 07:45:58,037 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-03-31 03:47:04] 2026-03-31 07:45:58,038 | INFO     | this job has now completed (state=finished)
[2026-03-31 03:47:04] 2026-03-31 07:45:58,038 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 03:47:04] 2026-03-31 07:45:58,038 | INFO     | log transfer has been attempted: DONE
[2026-03-31 03:47:04] 2026-03-31 07:45:58,038 | INFO     | job 7072265767 has finished - writing final server update
[2026-03-31 03:47:04] 2026-03-31 07:45:58,237 | INFO     | monitor loop #1662: job 0:7072265767 is in state 'finished'
[2026-03-31 03:47:04] 2026-03-31 07:45:58,238 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-31 03:47:04] 2026-03-31 07:45:58,038 | INFO     | total number of processed events: 400 (read)
[2026-03-31 03:47:04] 2026-03-31 07:45:58,611 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7072265767/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 03:47:04] 2026-03-31 07:45:58,611 | INFO     | extracted standard info from prmon json
[2026-03-31 03:47:04] 2026-03-31 07:45:58,612 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 03:47:04] 2026-03-31 07:45:58,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 03:47:04] 2026-03-31 07:45:58,816 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 03:47:04] 2026-03-31 07:45:59,040 | INFO     | fitting pss+swap vs Time
[2026-03-31 03:47:04] 2026-03-31 07:45:59,041 | INFO     | sum of square deviations: 31783006245.298992
[2026-03-31 03:47:04] 2026-03-31 07:45:59,134 | INFO     | sum of deviations: -167545388674.9402
[2026-03-31 03:47:04] 2026-03-31 07:45:59,134 | INFO     | mean x (centered): 0.0
[2026-03-31 03:47:04] 2026-03-31 07:45:59,134 | INFO     | mean y: 2097506.8183760685
[2026-03-31 03:47:04] 2026-03-31 07:45:59,134 | INFO     | intersect: 2097506.8183760685
[2026-03-31 03:47:04] 2026-03-31 07:45:59,135 | INFO     | chi2: 5.774731579302804
[2026-03-31 03:47:04] 2026-03-31 07:45:59,170 | INFO     | sum of square deviations: 30775209443.416798
[2026-03-31 03:47:04] 2026-03-31 07:45:59,252 | INFO     | sum of deviations: -45232717778.215996
[2026-03-31 03:47:04] 2026-03-31 07:45:59,253 | INFO     | mean x (centered): 0.0
[2026-03-31 03:47:04] 2026-03-31 07:45:59,253 | INFO     | mean y: 2116015.425485961
[2026-03-31 03:47:04] 2026-03-31 07:45:59,253 | INFO     | intersect: 2116015.425485961
[2026-03-31 03:47:04] 2026-03-31 07:45:59,253 | INFO     | chi2: 2.403560614323312
[2026-03-31 03:47:04] 2026-03-31 07:45:59,254 | INFO     | current chi2=2.403560614323312 (change=58.3779681996319 %)
[2026-03-31 03:47:04] 2026-03-31 07:45:59,254 | INFO     | sum of square deviations: 29788891320.40388
[2026-03-31 03:47:04] 2026-03-31 07:45:59,329 | INFO     | sum of deviations: -43030376368.95194
[2026-03-31 03:47:04] 2026-03-31 07:45:59,329 | INFO     | mean x (centered): 0.0
[2026-03-31 03:47:04] 2026-03-31 07:45:59,330 | INFO     | mean y: 2116357.0742358076
[2026-03-31 03:47:04] 2026-03-31 07:45:59,330 | INFO     | intersect: 2116357.0742358076
[2026-03-31 03:47:04] 2026-03-31 07:45:59,330 | INFO     | chi2: 2.395828334963016
[2026-03-31 03:47:04] 2026-03-31 07:45:59,330 | INFO     | current chi2=2.395828334963016 (change=0.3217010344660266 %)
[2026-03-31 03:47:04] 2026-03-31 07:45:59,331 | INFO     | right removable region: 457
[2026-03-31 03:47:04] 2026-03-31 07:45:59,331 | INFO     | sum of square deviations: 30774997406.717094
[2026-03-31 03:47:04] 2026-03-31 07:45:59,370 | INFO     | sum of deviations: -224788285264.1296
[2026-03-31 03:47:04] 2026-03-31 07:45:59,370 | INFO     | mean x (centered): 0.0
[2026-03-31 03:47:04] 2026-03-31 07:45:59,420 | INFO     | mean y: 2106121.9546436286
[2026-03-31 03:47:04] 2026-03-31 07:45:59,421 | INFO     | intersect: 2106121.9546436286
[2026-03-31 03:47:04] 2026-03-31 07:45:59,421 | INFO     | chi2: 4.395688741298937
[2026-03-31 03:47:04] 2026-03-31 07:45:59,422 | INFO     | current chi2=4.395688741298937 (change=23.880639629147268 %)
[2026-03-31 03:47:04] 2026-03-31 07:45:59,422 | INFO     | left removable region: 5
[2026-03-31 03:47:04] 2026-03-31 07:45:59,422 | INFO     | sum of square deviations: 28633243602.219097
[2026-03-31 03:47:04] 2026-03-31 07:45:59,517 | INFO     | sum of deviations: -101302704406.30089
[2026-03-31 03:47:04] 2026-03-31 07:45:59,517 | INFO     | mean x (centered): 0.0
[2026-03-31 03:47:04] 2026-03-31 07:45:59,517 | INFO     | mean y: 2125221.646017699
[2026-03-31 03:47:04] 2026-03-31 07:45:59,518 | INFO     | intersect: 2125221.646017699
[2026-03-31 03:47:04] 2026-03-31 07:45:59,518 | INFO     | chi2: 0.9731169542253766
[2026-03-31 03:47:04] 2026-03-31 07:45:59,518 | INFO     | current memory leak: -3.54 B/s (using 452 data points, chi2=0.97)
[2026-03-31 03:47:04] 2026-03-31 07:45:59,519 | INFO     | could have reported an average CPU frequency of 2902 MHz (19 samples)
[2026-03-31 03:47:04] 2026-03-31 07:45:59,557 | INFO     | ..............................
[2026-03-31 03:47:04] 2026-03-31 07:45:59,557 | INFO     | . Timing measurements:
[2026-03-31 03:47:04] 2026-03-31 07:45:59,557 | INFO     | . get job = 0 s
[2026-03-31 03:47:04] 2026-03-31 07:45:59,557 | INFO     | . initial setup = 9 s
[2026-03-31 03:47:04] 2026-03-31 07:45:59,557 | INFO     | . payload setup = 13 s
[2026-03-31 03:47:04] 2026-03-31 07:45:59,557 | INFO     | . stage-in = 0 s
[2026-03-31 03:47:04] 2026-03-31 07:45:59,557 | INFO     | . payload execution = 28525 s
[2026-03-31 03:47:04] 2026-03-31 07:45:59,565 | INFO     | . stage-out = 8 s
[2026-03-31 03:47:04] 2026-03-31 07:45:59,566 | INFO     | . log creation = 1 s
[2026-03-31 03:47:04] 2026-03-31 07:45:59,566 | INFO     | ..............................
[2026-03-31 03:47:04] 2026-03-31 07:46:01,781 | INFO     | 
[2026-03-31 03:47:04] 2026-03-31 07:46:01,781 | INFO     | job summary report
[2026-03-31 03:47:04] 2026-03-31 07:46:01,781 | INFO     | --------------------------------------------------
[2026-03-31 03:47:04] 2026-03-31 07:46:01,781 | INFO     | PanDA job id: 7072265767
[2026-03-31 03:47:04] 2026-03-31 07:46:01,782 | INFO     | task id: 49263208
[2026-03-31 03:47:04] 2026-03-31 07:46:01,782 | INFO     | errors: (none)
[2026-03-31 03:47:04] 2026-03-31 07:46:01,782 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 03:47:04] 2026-03-31 07:46:01,782 | INFO     | pilot state: finished 
[2026-03-31 03:47:04] 2026-03-31 07:46:01,782 | INFO     | transexitcode: 0
[2026-03-31 03:47:04] 2026-03-31 07:46:01,782 | INFO     | exeerrorcode: 0
[2026-03-31 03:47:04] 2026-03-31 07:46:01,782 | INFO     | exeerrordiag: 
[2026-03-31 03:47:04] 2026-03-31 07:46:01,782 | INFO     | exitcode: 0
[2026-03-31 03:47:04] 2026-03-31 07:46:01,782 | INFO     | exitmsg: OK
[2026-03-31 03:47:04] 2026-03-31 07:46:01,782 | INFO     | cpuconsumptiontime: 39555 s
[2026-03-31 03:47:04] 2026-03-31 07:46:01,782 | INFO     | nevents: 400
[2026-03-31 03:47:04] 2026-03-31 07:46:01,782 | INFO     | neventsw: 0
[2026-03-31 03:47:04] 2026-03-31 07:46:01,782 | INFO     | pid: 963738
[2026-03-31 03:47:04] 2026-03-31 07:46:01,782 | INFO     | pgrp: 963738
[2026-03-31 03:47:04] 2026-03-31 07:46:01,782 | INFO     | corecount: 8
[2026-03-31 03:47:04] 2026-03-31 07:46:01,782 | INFO     | event service: False
[2026-03-31 03:47:04] 2026-03-31 07:46:01,783 | INFO     | sizes: {0: 2279790, 1: 2281619, 28545: 2318478, 28546: 2318477, 28555: 2327559, 28557: 2327615, 28561: 2327937}
[2026-03-31 03:47:04] 2026-03-31 07:46:01,783 | INFO     | --------------------------------------------------
[2026-03-31 03:47:04] 2026-03-31 07:46:01,783 | INFO     | 
[2026-03-31 03:47:04] 2026-03-31 07:46:01,783 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-31 03:47:04] 2026-03-31 07:46:01,904 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,904 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,904 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,905 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,905 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,905 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,905 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,905 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,905 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,905 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,905 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,905 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,906 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,906 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 03:47:04] 2026-03-31 07:46:01,906 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,906 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 03:47:04] 2026-03-31 07:46:01,906 | INFO     | job 7072265767 has completed (purged errors)
[2026-03-31 03:47:04] 2026-03-31 07:46:01,906 | INFO     | overall cleanup function is called
[2026-03-31 03:47:04] 2026-03-31 07:46:02,959 | INFO     | --- collectZombieJob: --- 10, [963738]
[2026-03-31 03:47:04] 2026-03-31 07:46:02,960 | INFO     | zombie collector waiting for pid 963738
[2026-03-31 03:47:04] 2026-03-31 07:46:02,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 03:47:04] 2026-03-31 07:46:02,960 | INFO     | collected zombie processes
[2026-03-31 03:47:04] 2026-03-31 07:46:02,960 | INFO     | will attempt to kill all subprocesses of pid=963738
[2026-03-31 03:47:04] 2026-03-31 07:46:06,538 | INFO     | PID=957857 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-31 03:47:04] 2026-03-31 07:46:06,575 | INFO     | .. there are 12 such processes running
[2026-03-31 03:47:04] 2026-03-31 07:46:09,405 | INFO     | process IDs to be killed: [963738] (in reverse order)
[2026-03-31 03:47:04] 2026-03-31 07:46:09,587 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 03:47:04] 2026-03-31 07:46:09,587 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 03:47:04] 2026-03-31 07:46:09,611 | INFO     | did not find any defunct processes belonging to 963738
[2026-03-31 03:47:04] 2026-03-31 07:46:09,635 | INFO     | did not find any defunct processes belonging to 963738
[2026-03-31 03:47:04] 2026-03-31 07:46:09,635 | INFO     | Ready for new job
[2026-03-31 03:47:04] 2026-03-31 07:46:09,642 | INFO     | **************************************
[2026-03-31 03:47:04] 2026-03-31 07:46:09,642 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 03:47:04] 2026-03-31 07:46:09,642 | INFO     | **************************************
[2026-03-31 03:47:04] 2026-03-31 07:46:09,642 | INFO     | 
[2026-03-31 03:47:04] 2026-03-31 07:46:09,660 | INFO     | architecture information:
[2026-03-31 03:47:04] 2026-03-31 07:46:09,665 | INFO     | executing command: cat /etc/os-release
[2026-03-31 03:47:04] 2026-03-31 07:46:09,703 | INFO     | cat /etc/os-release:
[2026-03-31 03:47:04] NAME="CentOS Linux"
[2026-03-31 03:47:04] VERSION="7 (Core)"
[2026-03-31 03:47:04] ID="centos"
[2026-03-31 03:47:04] ID_LIKE="rhel fedora"
[2026-03-31 03:47:04] VERSION_ID="7"
[2026-03-31 03:47:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 03:47:04] ANSI_COLOR="0;31"
[2026-03-31 03:47:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 03:47:04] HOME_URL="https://www.centos.org/"
[2026-03-31 03:47:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 03:47:04] 
[2026-03-31 03:47:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 03:47:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 03:47:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 03:47:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 03:47:04] 
[2026-03-31 03:47:04] 2026-03-31 07:46:09,703 | INFO     | **************************************
[2026-03-31 03:47:04] 2026-03-31 07:46:10,216 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-31 03:47:04] 2026-03-31 07:46:10,340 | INFO     | sufficient remaining disk space (74008494080 B)
[2026-03-31 03:47:04] 2026-03-31 07:46:10,340 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 03:47:04] 2026-03-31 07:46:10,340 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 03:47:04] 2026-03-31 07:46:10,341 | INFO     | update_server=False
[2026-03-31 03:47:04] 2026-03-31 07:46:10,341 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 03:47:04] 2026-03-31 07:46:10,341 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 03:47:04] 2026-03-31 07:46:10,341 | INFO     | aborting loop
[2026-03-31 03:47:04] 2026-03-31 07:46:10,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 03:47:04] 2026-03-31 07:46:10,948 | INFO     | all job control threads have been joined
[2026-03-31 03:47:04] 2026-03-31 07:46:11,142 | INFO     | all payload control threads have been joined
[2026-03-31 03:47:04] 2026-03-31 07:46:11,347 | INFO     | [job] retrieve thread has finished
[2026-03-31 03:47:04] 2026-03-31 07:46:11,353 | INFO     | [job] job monitor thread has finished
[2026-03-31 03:47:04] 2026-03-31 07:46:11,410 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 03:47:04] 2026-03-31 07:46:11,497 | INFO     | all data control threads have been joined
[2026-03-31 03:47:04] 2026-03-31 07:46:11,914 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 03:47:04] 2026-03-31 07:46:11,914 | INFO     | [data] copytool_in thread has finished
[2026-03-31 03:47:04] 2026-03-31 07:46:11,925 | INFO     | [job] validate thread has finished
[2026-03-31 03:47:04] 2026-03-31 07:46:11,930 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 03:47:04] 2026-03-31 07:46:11,931 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 03:47:04] 2026-03-31 07:46:11,955 | INFO     | [job] control thread has finished
[2026-03-31 03:47:04] 2026-03-31 07:46:12,151 | INFO     | [payload] control thread has finished
[2026-03-31 03:47:04] 2026-03-31 07:46:12,348 | INFO     | [data] copytool_out thread has finished
[2026-03-31 03:47:04] 2026-03-31 07:46:12,431 | INFO     | [job] queue monitor thread has finished
[2026-03-31 03:47:04] 2026-03-31 07:46:12,451 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 03:47:04] 2026-03-31 07:46:12,503 | INFO     | [data] control thread has finished
[2026-03-31 03:47:04] 2026-03-31 07:46:12,723 | INFO     | [payload] failed_post thread has finished
[2026-03-31 03:47:04] 2026-03-31 07:46:12,727 | INFO     | [payload] validate_post thread has finished
[2026-03-31 03:47:04] 2026-03-31 07:46:12,909 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 03:47:04] 2026-03-31 07:46:16,954 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 03:47:04] 2026-03-31 07:46:40,350 | INFO     | PID=957857 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-31 03:47:04] 2026-03-31 07:46:40,351 | INFO     | .. there are 12 such processes running
[2026-03-31 03:47:04] 2026-03-31 07:46:40,371 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 03:47:04] 2026-03-31 07:46:40,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 03:47:04] 2026-03-31 07:46:40,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 03:47:04] 2026-03-31 07:46:51,659 | INFO     | [monitor] cgroup control has ended
[2026-03-31 03:47:04] 2026-03-31 07:46:51,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139733717993280)>', '<ExcThread(monitor, started 139732994483968)>']
[2026-03-31 03:47:04] 2026-03-31 07:46:52,468 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 03:47:04] 2026-03-31 07:46:52,469 | INFO     | [monitor] control thread has ended
[2026-03-31 03:47:04] 2026-03-31 07:46:56,887 | INFO     | all workflow threads have been joined
[2026-03-31 03:47:04] 2026-03-31 07:46:56,888 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 03:47:04] 2026-03-31 07:46:56,888 | INFO     | traces error code: 0
[2026-03-31 03:47:04] 2026-03-31 07:46:56,888 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 03:47:04] 2026-03-31 07:47:03,415 [wrapper] ==== pilot stdout END ====
[2026-03-31 03:47:04] 2026-03-31 07:47:03,429 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 03:47:04] 2026-03-31 07:47:03,474 [wrapper] pilotpid: 957857
[2026-03-31 03:47:04] 2026-03-31 07:47:03,488 [wrapper] Pilot exit status: 0
[2026-03-31 03:47:04] 2026-03-31 07:47:03,508 [wrapper] pandaids: 7072265767
[2026-03-31 03:47:04] 2026-03-31 07:47:03,628 [wrapper] cleanup supervisor_pilot 1869652 957858
[2026-03-31 03:47:04] 2026-03-31 07:47:03,650 [wrapper] Test setup, not cleaning
[2026-03-31 03:47:04] 2026-03-31 07:47:03,679 [wrapper] apfmon messages muted
[2026-03-31 03:47:04] 2026-03-31 07:47:03,738 [wrapper] ==== wrapper stdout END ====
[2026-03-31 03:47:04] 2026-03-31 07:47:03,752 [wrapper] ==== wrapper stderr END ====
[2026-03-31 03:47:04]  *** Error codes and diagnostics ***
[2026-03-31 03:47:04]     "exeErrorCode": 0,
[2026-03-31 03:47:04]     "pilotErrorCode": 0,
[2026-03-31 03:47:04]  *** Listing of results directory ***
[2026-03-31 03:47:04] total 422888
[2026-03-31 03:47:04] -rw-r--r--. 1 boincer umatlas    644034 Mar 30 16:07 pilot3.tar.gz
[2026-03-31 03:47:04] -rwx------. 1 boincer umatlas     36322 Mar 30 16:08 runpilot2-wrapper.sh
[2026-03-31 03:47:04] -rw-r--r--. 1 boincer umatlas      5118 Mar 30 16:09 queuedata.json
[2026-03-31 03:47:04] -rw-r--r--. 1 boincer umatlas       100 Mar 30 19:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 03:47:04] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 30 19:48 run_atlas
[2026-03-31 03:47:04] -rw-r--r--. 1 boincer umatlas       105 Mar 30 19:48 job.xml
[2026-03-31 03:47:04] -rw-r--r--. 2 boincer umatlas 223492457 Mar 30 19:48 EVNT.49263206._000452.pool.root.1
[2026-03-31 03:47:04] -rw-r--r--. 2 boincer umatlas     15845 Mar 30 19:48 start_atlas.sh
[2026-03-31 03:47:04] drwxrwx--x. 2 boincer umatlas      4096 Mar 30 19:48 shared
[2026-03-31 03:47:04] -rw-r--r--. 2 boincer umatlas    656756 Mar 30 19:48 input.tar.gz
[2026-03-31 03:47:04] -rw-r--r--. 1 boincer umatlas         0 Mar 30 19:48 boinc_lockfile
[2026-03-31 03:47:04] -rw-r--r--. 1 boincer umatlas      2575 Mar 30 19:48 pandaJob.out
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas        57 Mar 30 19:48 setup.sh.local
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas   1004000 Mar 30 19:49 agis_schedconf.cvmfs.json
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas       442 Mar 30 19:49 workernode_map.json
[2026-03-31 03:47:04] drwx------. 5 boincer umatlas      4096 Mar 30 19:49 pilot3
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas 200001436 Mar 31 03:40 HITS.49263208._010055.pool.root.1
[2026-03-31 03:47:04] -rw-r--r--. 1 boincer umatlas       530 Mar 31 03:40 boinc_task_state.xml
[2026-03-31 03:47:04] -rw-r--r--. 1 boincer umatlas      6843 Mar 31 03:45 init_data.xml
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas      1035 Mar 31 03:45 memory_monitor_summary.json
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas   1511579 Mar 31 03:45 agis_ddmendpoints.agis.ALL.json
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas    497288 Mar 31 03:45 log.49263208._010055.job.log.tgz.1
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas      6406 Mar 31 03:45 heartbeat_new.json
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas      6297 Mar 31 03:45 heartbeat.json
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas        95 Mar 31 03:46 pilot_heartbeat.json
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas      4818 Mar 31 03:46 pilotlog.txt
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas   2238195 Mar 31 03:47 log.49263208._010055.job.log.1
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas       357 Mar 31 03:47 output.list
[2026-03-31 03:47:04] -rw-r--r--. 1 boincer umatlas       620 Mar 31 03:47 runtime_log
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas   2754560 Mar 31 03:47 result.tar.gz
[2026-03-31 03:47:04] -rw-r--r--. 1 boincer umatlas      9347 Mar 31 03:47 runtime_log.err
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas       658 Mar 31 03:47 pTbKDm94XR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmZmOKDmzljKvm.diag
[2026-03-31 03:47:04] -rw-r--r--. 1 boincer umatlas        28 Mar 31 03:47 wrapper_checkpoint.txt
[2026-03-31 03:47:04] -rw-r--r--. 1 boincer umatlas      8192 Mar 31 03:47 boinc_mmap_file
[2026-03-31 03:47:04] -rw-r--r--. 1 boincer umatlas     21326 Mar 31 03:47 stderr.txt
[2026-03-31 03:47:04] HITS file was successfully produced:
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas 200001436 Mar 31 03:40 shared/HITS.pool.root.1
[2026-03-31 03:47:04]  *** Contents of shared directory: ***
[2026-03-31 03:47:04] total 416928
[2026-03-31 03:47:04] -rw-r--r--. 2 boincer umatlas 223492457 Mar 30 19:48 ATLAS.root_0
[2026-03-31 03:47:04] -rw-r--r--. 2 boincer umatlas     15845 Mar 30 19:48 start_atlas.sh
[2026-03-31 03:47:04] -rw-r--r--. 2 boincer umatlas    656756 Mar 30 19:48 input.tar.gz
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas 200001436 Mar 31 03:40 HITS.pool.root.1
[2026-03-31 03:47:04] -rw-------. 1 boincer umatlas   2754560 Mar 31 03:47 result.tar.gz
03:47:25 (952660): run_atlas exited; CPU time 40418.127869
03:47:25 (952660): called boinc_finish(0)

</stderr_txt>
]]>

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