Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:13:16 (5713): wrapper (7.7.26015): starting
03:13:16 (5713): wrapper: running run_atlas (--nthreads 8)
[2026-03-31 03:13:16] Arguments: --nthreads 8
[2026-03-31 03:13:16] Threads: 8
[2026-03-31 03:13:16] Checking for CVMFS
[2026-03-31 03:13:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 03:13:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 03:13:19] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 03:13:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 03:13:20] 2.11.2.0 20181 151382 132964 157901 1 202 13283435 25165824 541 130560 156 42101465 99.819 33805334 1065 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-31 03:13:20] CVMFS is ok
[2026-03-31 03:13:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 03:13:20] Checking for apptainer binary...
[2026-03-31 03:13:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 03:13:20] Running /usr/bin/apptainer --version
[2026-03-31 03:13:20] apptainer version 1.3.2-1.el7
[2026-03-31 03:13:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 03:13:26] cg-vwn427.simple-grid.lan
[2026-03-31 03:13:26] apptainer works
[2026-03-31 03:13:26] Set ATHENA_PROC_NUMBER=8
[2026-03-31 03:13:26] Set ATHENA_CORE_NUMBER=8
[2026-03-31 03:13:26] Starting ATLAS job with PandaID=7072265565
[2026-03-31 03:13:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 05:21:01]  *** The last 200 lines of the pilot log: ***
[2026-03-31 05:21:01] 2026-03-31 03:20:27,982 | INFO     | extracted standard info from prmon json
[2026-03-31 05:21:01] 2026-03-31 03:20:27,982 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 05:21:01] 2026-03-31 03:20:27,982 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 05:21:01] 2026-03-31 03:20:27,982 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 05:21:01] 2026-03-31 03:20:27,985 | INFO     | fitting pss+swap vs Time
[2026-03-31 05:21:01] 2026-03-31 03:20:27,986 | INFO     | sum of square deviations: 591173875.0
[2026-03-31 05:21:01] 2026-03-31 03:20:27,986 | INFO     | sum of deviations: -10820966656.000002
[2026-03-31 05:21:01] 2026-03-31 03:20:27,986 | INFO     | mean x (centered): 0.0
[2026-03-31 05:21:01] 2026-03-31 03:20:27,987 | INFO     | mean y: 2549093.7419354836
[2026-03-31 05:21:01] 2026-03-31 03:20:27,987 | INFO     | intersect: 2549093.7419354836
[2026-03-31 05:21:01] 2026-03-31 03:20:27,987 | INFO     | chi2: 2.5875822394270305
[2026-03-31 05:21:01] 2026-03-31 03:20:27,987 | INFO     | sum of square deviations: 522502820.0
[2026-03-31 05:21:01] 2026-03-31 03:20:27,988 | INFO     | sum of deviations: -1557765174.0000076
[2026-03-31 05:21:01] 2026-03-31 03:20:27,988 | INFO     | mean x (centered): 0.0
[2026-03-31 05:21:01] 2026-03-31 03:20:27,988 | INFO     | mean y: 2569073.268907563
[2026-03-31 05:21:01] 2026-03-31 03:20:27,988 | INFO     | intersect: 2569073.268907563
[2026-03-31 05:21:01] 2026-03-31 03:20:27,989 | INFO     | chi2: 1.8328404613455325
[2026-03-31 05:21:01] 2026-03-31 03:20:27,989 | INFO     | current chi2=1.8328404613455325 (change=29.16783731861681 %)
[2026-03-31 05:21:01] 2026-03-31 03:20:27,989 | INFO     | sum of square deviations: 459366752.5
[2026-03-31 05:21:01] 2026-03-31 03:20:27,990 | INFO     | sum of deviations: -624693923.9999994
[2026-03-31 05:21:01] 2026-03-31 03:20:27,990 | INFO     | mean x (centered): 0.0
[2026-03-31 05:21:01] 2026-03-31 03:20:27,990 | INFO     | mean y: 2571325.035087719
[2026-03-31 05:21:01] 2026-03-31 03:20:27,990 | INFO     | intersect: 2571325.035087719
[2026-03-31 05:21:01] 2026-03-31 03:20:27,990 | INFO     | chi2: 1.83581500452021
[2026-03-31 05:21:01] 2026-03-31 03:20:27,990 | INFO     | current chi2=1.83581500452021 (change=-0.16229143983943956 %)
[2026-03-31 05:21:01] 2026-03-31 03:20:27,991 | INFO     | right removable region: 113
[2026-03-31 05:21:01] 2026-03-31 03:20:27,991 | INFO     | sum of square deviations: 522502820.0
[2026-03-31 05:21:01] 2026-03-31 03:20:27,992 | INFO     | sum of deviations: -31520224755.999992
[2026-03-31 05:21:01] 2026-03-31 03:20:27,992 | INFO     | mean x (centered): 0.0
[2026-03-31 05:21:01] 2026-03-31 03:20:27,992 | INFO     | mean y: 2594287.3949579834
[2026-03-31 05:21:01] 2026-03-31 03:20:27,992 | INFO     | intersect: 2594287.3949579834
[2026-03-31 05:21:01] 2026-03-31 03:20:27,992 | INFO     | chi2: 0.9326657443800567
[2026-03-31 05:21:01] 2026-03-31 03:20:27,992 | INFO     | current chi2=0.9326657443800567 (change=63.956092673345246 %)
[2026-03-31 05:21:01] 2026-03-31 03:20:27,993 | INFO     | sum of square deviations: 459366752.5
[2026-03-31 05:21:01] 2026-03-31 03:20:27,994 | INFO     | sum of deviations: -31689805274.500004
[2026-03-31 05:21:01] 2026-03-31 03:20:27,994 | INFO     | mean x (centered): 0.0
[2026-03-31 05:21:01] 2026-03-31 03:20:27,994 | INFO     | mean y: 2594563.0789473685
[2026-03-31 05:21:01] 2026-03-31 03:20:27,994 | INFO     | intersect: 2594563.0789473685
[2026-03-31 05:21:01] 2026-03-31 03:20:27,994 | INFO     | chi2: 0.8961755172530519
[2026-03-31 05:21:01] 2026-03-31 03:20:27,994 | INFO     | current chi2=0.8961755172530519 (change=3.912465676678181 %)
[2026-03-31 05:21:01] 2026-03-31 03:20:27,995 | INFO     | left removable region: 10
[2026-03-31 05:21:01] 2026-03-31 03:20:27,995 | INFO     | sum of square deviations: 338804492.0
[2026-03-31 05:21:01] 2026-03-31 03:20:27,996 | INFO     | sum of deviations: -20357817737.000008
[2026-03-31 05:21:01] 2026-03-31 03:20:27,996 | INFO     | mean x (centered): 0.0
[2026-03-31 05:21:01] 2026-03-31 03:20:27,996 | INFO     | mean y: 2624307.145631068
[2026-03-31 05:21:01] 2026-03-31 03:20:27,996 | INFO     | intersect: 2624307.145631068
[2026-03-31 05:21:01] 2026-03-31 03:20:27,996 | INFO     | chi2: 0.08989859295301046
[2026-03-31 05:21:01] 2026-03-31 03:20:27,996 | INFO     | current memory leak: -60.09 B/s (using 103 data points, chi2=0.09)
[2026-03-31 05:21:01] 2026-03-31 03:20:27,997 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-03-31 05:21:01] 2026-03-31 03:20:27,997 | INFO     | ..............................
[2026-03-31 05:21:01] 2026-03-31 03:20:27,997 | INFO     | . Timing measurements:
[2026-03-31 05:21:01] 2026-03-31 03:20:27,997 | INFO     | . get job = 0 s
[2026-03-31 05:21:01] 2026-03-31 03:20:27,998 | INFO     | . initial setup = 15 s
[2026-03-31 05:21:01] 2026-03-31 03:20:27,998 | INFO     | . payload setup = 21 s
[2026-03-31 05:21:01] 2026-03-31 03:20:27,998 | INFO     | . stage-in = 0 s
[2026-03-31 05:21:01] 2026-03-31 03:20:27,998 | INFO     | . payload execution = 7526 s
[2026-03-31 05:21:01] 2026-03-31 03:20:27,998 | INFO     | . stage-out = 1 s
[2026-03-31 05:21:01] 2026-03-31 03:20:27,998 | INFO     | . log creation = 0 s
[2026-03-31 05:21:01] 2026-03-31 03:20:27,998 | INFO     | ..............................
[2026-03-31 05:21:01] 2026-03-31 03:20:28,464 | INFO     | 
[2026-03-31 05:21:01] 2026-03-31 03:20:28,465 | INFO     | job summary report
[2026-03-31 05:21:01] 2026-03-31 03:20:28,465 | INFO     | --------------------------------------------------
[2026-03-31 05:21:01] 2026-03-31 03:20:28,465 | INFO     | PanDA job id: 7072265565
[2026-03-31 05:21:01] 2026-03-31 03:20:28,465 | INFO     | task id: 49263200
[2026-03-31 05:21:01] 2026-03-31 03:20:28,465 | INFO     | errors: (none)
[2026-03-31 05:21:01] 2026-03-31 03:20:28,465 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 05:21:01] 2026-03-31 03:20:28,466 | INFO     | pilot state: finished 
[2026-03-31 05:21:01] 2026-03-31 03:20:28,466 | INFO     | transexitcode: 0
[2026-03-31 05:21:01] 2026-03-31 03:20:28,466 | INFO     | exeerrorcode: 0
[2026-03-31 05:21:01] 2026-03-31 03:20:28,466 | INFO     | exeerrordiag: 
[2026-03-31 05:21:01] 2026-03-31 03:20:28,466 | INFO     | exitcode: 0
[2026-03-31 05:21:01] 2026-03-31 03:20:28,466 | INFO     | exitmsg: OK
[2026-03-31 05:21:01] 2026-03-31 03:20:28,466 | INFO     | cpuconsumptiontime: 55334 s
[2026-03-31 05:21:01] 2026-03-31 03:20:28,466 | INFO     | nevents: 400
[2026-03-31 05:21:01] 2026-03-31 03:20:28,466 | INFO     | neventsw: 0
[2026-03-31 05:21:01] 2026-03-31 03:20:28,467 | INFO     | pid: 14593
[2026-03-31 05:21:01] 2026-03-31 03:20:28,467 | INFO     | pgrp: 14593
[2026-03-31 05:21:01] 2026-03-31 03:20:28,467 | INFO     | corecount: 8
[2026-03-31 05:21:01] 2026-03-31 03:20:28,467 | INFO     | event service: False
[2026-03-31 05:21:01] 2026-03-31 03:20:28,467 | INFO     | sizes: {0: 2279133, 1: 2281620, 2: 2281620, 7551: 2309178, 7552: 2309177, 7554: 2318233, 7555: 2318417, 7556: 2318611}
[2026-03-31 05:21:01] 2026-03-31 03:20:28,467 | INFO     | --------------------------------------------------
[2026-03-31 05:21:01] 2026-03-31 03:20:28,467 | INFO     | 
[2026-03-31 05:21:01] 2026-03-31 03:20:28,467 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-03-31 05:21:01] 2026-03-31 03:20:28,534 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,534 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,534 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,535 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,535 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,535 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,535 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,535 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,535 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,535 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,535 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,535 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,535 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,536 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,536 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,536 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,536 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,536 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 05:21:01] 2026-03-31 03:20:28,536 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,536 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 05:21:01] 2026-03-31 03:20:28,536 | INFO     | job 7072265565 has completed (purged errors)
[2026-03-31 05:21:01] 2026-03-31 03:20:28,536 | INFO     | overall cleanup function is called
[2026-03-31 05:21:01] 2026-03-31 03:20:29,545 | INFO     | --- collectZombieJob: --- 10, [14593]
[2026-03-31 05:21:01] 2026-03-31 03:20:29,545 | INFO     | zombie collector waiting for pid 14593
[2026-03-31 05:21:01] 2026-03-31 03:20:29,545 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 05:21:01] 2026-03-31 03:20:29,545 | INFO     | collected zombie processes
[2026-03-31 05:21:01] 2026-03-31 03:20:29,545 | INFO     | will attempt to kill all subprocesses of pid=14593
[2026-03-31 05:21:01] 2026-03-31 03:20:29,607 | INFO     | process IDs to be killed: [14593] (in reverse order)
[2026-03-31 05:21:01] 2026-03-31 03:20:29,678 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 05:21:01] 2026-03-31 03:20:29,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 05:21:01] 2026-03-31 03:20:29,681 | INFO     | did not find any defunct processes belonging to 14593
[2026-03-31 05:21:01] 2026-03-31 03:20:29,683 | INFO     | did not find any defunct processes belonging to 14593
[2026-03-31 05:21:01] 2026-03-31 03:20:29,683 | INFO     | Ready for new job
[2026-03-31 05:21:01] 2026-03-31 03:20:29,684 | INFO     | **************************************
[2026-03-31 05:21:01] 2026-03-31 03:20:29,685 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 05:21:01] 2026-03-31 03:20:29,685 | INFO     | **************************************
[2026-03-31 05:21:01] 2026-03-31 03:20:29,685 | INFO     | 
[2026-03-31 05:21:01] 2026-03-31 03:20:29,685 | INFO     | pilot is running in a VM
[2026-03-31 05:21:01] 2026-03-31 03:20:29,686 | INFO     | architecture information:
[2026-03-31 05:21:01] 2026-03-31 03:20:29,686 | INFO     | executing command: cat /etc/os-release
[2026-03-31 05:21:01] 2026-03-31 03:20:29,706 | INFO     | cat /etc/os-release:
[2026-03-31 05:21:01] NAME="CentOS Linux"
[2026-03-31 05:21:01] VERSION="7 (Core)"
[2026-03-31 05:21:01] ID="centos"
[2026-03-31 05:21:01] ID_LIKE="rhel fedora"
[2026-03-31 05:21:01] VERSION_ID="7"
[2026-03-31 05:21:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 05:21:01] ANSI_COLOR="0;31"
[2026-03-31 05:21:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 05:21:01] HOME_URL="https://www.centos.org/"
[2026-03-31 05:21:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 05:21:01] 
[2026-03-31 05:21:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 05:21:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 05:21:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 05:21:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 05:21:01] 
[2026-03-31 05:21:01] 2026-03-31 03:20:29,707 | INFO     | **************************************
[2026-03-31 05:21:01] 2026-03-31 03:20:30,210 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-03-31 05:21:01] 2026-03-31 03:20:30,224 | WARNING  | process 14593 can no longer be monitored (due to stat problems) - aborting
[2026-03-31 05:21:01] 2026-03-31 03:20:30,244 | INFO     | sufficient remaining disk space (497505271808 B)
[2026-03-31 05:21:01] 2026-03-31 03:20:30,244 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 05:21:01] 2026-03-31 03:20:30,245 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 05:21:01] 2026-03-31 03:20:30,245 | INFO     | update_server=False
[2026-03-31 05:21:01] 2026-03-31 03:20:30,245 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 05:21:01] 2026-03-31 03:20:30,248 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 05:21:01] 2026-03-31 03:20:30,274 | INFO     | using path: /var/lib/boinc/slots/15/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 05:21:01] 2026-03-31 03:20:30,333 | INFO     | number of running child processes to parent process 14593: 1
[2026-03-31 05:21:01] 2026-03-31 03:20:30,333 | INFO     | maximum number of monitored processes: 6
[2026-03-31 05:21:01] 2026-03-31 03:20:30,333 | INFO     | aborting job monitoring since job object (job id=7072265565) has expired
[2026-03-31 05:21:01] 2026-03-31 03:20:30,333 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 05:21:01] 2026-03-31 03:20:30,334 | INFO     | will abort loop
[2026-03-31 05:21:01] 2026-03-31 03:20:31,104 | INFO     | all job control threads have been joined
[2026-03-31 05:21:01] 2026-03-31 03:20:31,154 | INFO     | all data control threads have been joined
[2026-03-31 05:21:01] 2026-03-31 03:20:31,251 | INFO     | [job] retrieve thread has finished
[2026-03-31 05:21:01] 2026-03-31 03:20:31,339 | INFO     | [job] job monitor thread has finished
[2026-03-31 05:21:01] 2026-03-31 03:20:31,414 | INFO     | all payload control threads have been joined
[2026-03-31 05:21:01] 2026-03-31 03:20:31,481 | INFO     | [job] validate thread has finished
[2026-03-31 05:21:01] 2026-03-31 03:20:31,506 | INFO     | [payload] validate_post thread has finished
[2026-03-31 05:21:01] 2026-03-31 03:20:31,562 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 05:21:01] 2026-03-31 03:20:31,878 | INFO     | [data] copytool_in thread has finished
[2026-03-31 05:21:01] 2026-03-31 03:20:31,998 | INFO     | [payload] failed_post thread has finished
[2026-03-31 05:21:01] 2026-03-31 03:20:32,110 | INFO     | [job] control thread has finished
[2026-03-31 05:21:01] 2026-03-31 03:20:32,160 | INFO     | [data] control thread has finished
[2026-03-31 05:21:01] 2026-03-31 03:20:32,255 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 05:21:01] 2026-03-31 03:20:32,360 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 05:21:01] 2026-03-31 03:20:32,420 | INFO     | [payload] control thread has finished
[2026-03-31 05:21:01] 2026-03-31 03:20:32,501 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 05:21:01] 2026-03-31 03:20:32,525 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 05:21:01] 2026-03-31 03:20:33,123 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 05:21:01] 2026-03-31 03:20:33,564 | INFO     | [data] copytool_out thread has finished
[2026-03-31 05:21:01] 2026-03-31 03:20:34,129 | INFO     | [job] queue monitor thread has finished
[2026-03-31 05:21:01] 2026-03-31 03:20:34,256 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 05:21:01] 2026-03-31 03:20:42,788 | INFO     | [monitor] cgroup control has ended
[2026-03-31 05:21:01] 2026-03-31 03:20:43,003 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139890244429632)>', '<ExcThread(monitor, started 139889785935616)>']
[2026-03-31 05:21:01] 2026-03-31 03:20:48,028 | INFO     | all workflow threads have been joined
[2026-03-31 05:21:01] 2026-03-31 03:20:48,029 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 05:21:01] 2026-03-31 03:20:48,029 | INFO     | traces error code: 0
[2026-03-31 05:21:01] 2026-03-31 03:20:48,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 05:21:01] 2026-03-31 03:21:00,972 | INFO     | PID=9888 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-31 05:21:01] 2026-03-31 03:21:00,972 | INFO     | .. there are 2 such processes running
[2026-03-31 05:21:01] 2026-03-31 03:21:00,974 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 05:21:01] 2026-03-31 03:21:00,974 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 05:21:01] 2026-03-31 03:21:00,974 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 05:21:01] 2026-03-31 03:21:00,974 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 05:21:01] 2026-03-31 03:21:00,974 | CRITICAL | thread 'MainThread' is not alive
[2026-03-31 05:21:01] 2026-03-31 03:21:00,974 | INFO     | [monitor] control thread has ended
[2026-03-31 05:21:01] 2026-03-31 03:21:01,138 [wrapper] ==== pilot stdout END ====
[2026-03-31 05:21:01] 2026-03-31 03:21:01,144 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 05:21:01] 2026-03-31 03:21:01,154 [wrapper] pilotpid: 9888
[2026-03-31 05:21:01] 2026-03-31 03:21:01,160 [wrapper] Pilot exit status: 0
[2026-03-31 05:21:01] 2026-03-31 03:21:01,187 [wrapper] pandaids: 7072265565
[2026-03-31 05:21:01] 2026-03-31 03:21:01,265 [wrapper] cleanup supervisor_pilot 23753 9889
[2026-03-31 05:21:01] 2026-03-31 03:21:01,272 [wrapper] Test setup, not cleaning
[2026-03-31 05:21:01] 2026-03-31 03:21:01,287 [wrapper] apfmon messages muted
[2026-03-31 05:21:01] 2026-03-31 03:21:01,290 [wrapper] ==== wrapper stdout END ====
[2026-03-31 05:21:01] 2026-03-31 03:21:01,293 [wrapper] ==== wrapper stderr END ====
[2026-03-31 05:21:01]  *** Error codes and diagnostics ***
[2026-03-31 05:21:01]     "exeErrorCode": 0,
[2026-03-31 05:21:01]     "pilotErrorCode": 0,
[2026-03-31 05:21:01]  *** Listing of results directory ***
[2026-03-31 05:21:01] total 409964
[2026-03-31 05:21:01] -rw-r--r--. 1 boinc boinc    644034 Mar 30 22:07 pilot3.tar.gz
[2026-03-31 05:21:01] -rw-r--r--. 1 boinc boinc      5118 Mar 30 22:07 queuedata.json
[2026-03-31 05:21:01] -rwx------. 1 boinc boinc     36322 Mar 30 22:07 runpilot2-wrapper.sh
[2026-03-31 05:21:01] -rw-r--r--. 1 boinc boinc       100 Mar 31 03:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 05:21:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 03:13 run_atlas
[2026-03-31 05:21:01] -rw-r--r--. 1 boinc boinc       105 Mar 31 03:13 job.xml
[2026-03-31 05:21:01] -rw-r--r--. 1 boinc boinc      6391 Mar 31 03:13 init_data.xml
[2026-03-31 05:21:01] -rw-r--r--. 2 boinc boinc 220422885 Mar 31 03:13 EVNT.49263198._000403.pool.root.1
[2026-03-31 05:21:01] -rw-r--r--. 2 boinc boinc     15845 Mar 31 03:13 start_atlas.sh
[2026-03-31 05:21:01] drwxrwx--x. 2 boinc boinc        68 Mar 31 03:13 shared
[2026-03-31 05:21:01] -rw-r--r--. 2 boinc boinc    656760 Mar 31 03:13 input.tar.gz
[2026-03-31 05:21:01] -rw-r--r--. 1 boinc boinc         0 Mar 31 03:13 boinc_lockfile
[2026-03-31 05:21:01] -rw-r--r--. 1 boinc boinc      2575 Mar 31 03:13 pandaJob.out
[2026-03-31 05:21:01] -rw-------. 1 boinc boinc   1004000 Mar 31 03:14 agis_schedconf.cvmfs.json
[2026-03-31 05:21:01] -rw-------. 1 boinc boinc   1511579 Mar 31 03:14 agis_ddmendpoints.agis.ALL.json
[2026-03-31 05:21:01] -rw-------. 1 boinc boinc       415 Mar 31 03:14 workernode_map.json
[2026-03-31 05:21:01] drwx------. 5 boinc boinc      4096 Mar 31 03:14 pilot3
[2026-03-31 05:21:01] -rw-------. 1 boinc boinc 193197208 Mar 31 05:19 HITS.49263200._010065.pool.root.1
[2026-03-31 05:21:01] -rw-r--r--. 1 boinc boinc       530 Mar 31 05:20 boinc_task_state.xml
[2026-03-31 05:21:01] -rw-------. 1 boinc boinc      1011 Mar 31 05:20 memory_monitor_summary.json
[2026-03-31 05:21:01] -rw-------. 1 boinc boinc    333213 Mar 31 05:20 log.49263200._010065.job.log.tgz.1
[2026-03-31 05:21:01] -rw-------. 1 boinc boinc      6331 Mar 31 05:20 heartbeat_new.json
[2026-03-31 05:21:01] -rw-------. 1 boinc boinc      6222 Mar 31 05:20 heartbeat.json
[2026-03-31 05:21:01] -rw-r--r--. 1 boinc boinc      8192 Mar 31 05:20 boinc_mmap_file
[2026-03-31 05:21:01] -rw-r--r--. 1 boinc boinc        27 Mar 31 05:20 wrapper_checkpoint.txt
[2026-03-31 05:21:01] -rw-------. 1 boinc boinc        95 Mar 31 05:21 pilot_heartbeat.json
[2026-03-31 05:21:01] -rw-------. 1 boinc boinc       889 Mar 31 05:21 pilotlog.txt
[2026-03-31 05:21:01] -rw-------. 1 boinc boinc    729691 Mar 31 05:21 log.49263200._010065.job.log.1
[2026-03-31 05:21:01] -rw-------. 1 boinc boinc       357 Mar 31 05:21 output.list
[2026-03-31 05:21:01] -rw-r--r--. 1 boinc boinc       620 Mar 31 05:21 runtime_log
[2026-03-31 05:21:01] -rw-------. 1 boinc boinc   1085440 Mar 31 05:21 result.tar.gz
[2026-03-31 05:21:01] -rw-------. 1 boinc boinc       653 Mar 31 05:21 xLCNDmt4XR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmjmQKDmHIIMMo.diag
[2026-03-31 05:21:01] -rw-r--r--. 1 boinc boinc      8831 Mar 31 05:21 runtime_log.err
[2026-03-31 05:21:01] -rw-r--r--. 1 boinc boinc     20649 Mar 31 05:21 stderr.txt
[2026-03-31 05:21:01] HITS file was successfully produced:
[2026-03-31 05:21:01] -rw-------. 1 boinc boinc 193197208 Mar 31 05:19 shared/HITS.pool.root.1
[2026-03-31 05:21:01]  *** Contents of shared directory: ***
[2026-03-31 05:21:01] total 405652
[2026-03-31 05:21:01] -rw-r--r--. 2 boinc boinc 220422885 Mar 31 03:13 ATLAS.root_0
[2026-03-31 05:21:01] -rw-r--r--. 2 boinc boinc     15845 Mar 31 03:13 start_atlas.sh
[2026-03-31 05:21:01] -rw-r--r--. 2 boinc boinc    656760 Mar 31 03:13 input.tar.gz
[2026-03-31 05:21:01] -rw-------. 1 boinc boinc 193197208 Mar 31 05:19 HITS.pool.root.1
[2026-03-31 05:21:01] -rw-------. 1 boinc boinc   1085440 Mar 31 05:21 result.tar.gz
05:21:02 (5713): run_atlas exited; CPU time 55385.920871
05:21:02 (5713): called boinc_finish(0)

</stderr_txt>
]]>

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