Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:59:37 (2081843): wrapper (7.7.26015): starting
01:59:37 (2081843): wrapper: running run_atlas (--nthreads 3)
[2026-03-31 01:59:37] Arguments: --nthreads 3
[2026-03-31 01:59:37] Threads: 3
[2026-03-31 01:59:37] Checking for CVMFS
[2026-03-31 01:59:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 01:59:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 01:59:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 01:59:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 01:59:38] 2.9.2.0 1278530 6652 64428 157900 3 89 19808009 36864000 653 130560 0 2967658 99.984 260283 14450 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-31 01:59:38] CVMFS is ok
[2026-03-31 01:59:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 01:59:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 01:59:38] Further information can be found at the LHC@home message board.
[2026-03-31 01:59:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 01:59:38] Checking for apptainer binary...
[2026-03-31 01:59:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 01:59:38] Running /usr/bin/apptainer --version
[2026-03-31 01:59:38] apptainer version 1.4.1-1.1
[2026-03-31 01:59:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 01:59:38] thA389a
[2026-03-31 01:59:38] apptainer works
[2026-03-31 01:59:38] Set ATHENA_PROC_NUMBER=3
[2026-03-31 01:59:38] Set ATHENA_CORE_NUMBER=3
[2026-03-31 01:59:38] Starting ATLAS job with PandaID=7074511499
[2026-03-31 01:59:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 04:40:13]  *** The last 200 lines of the pilot log: ***
[2026-03-31 04:40:13] 2026-03-31 02:39:42,024 | INFO     | did not find any defunct processes belonging to 2090359
[2026-03-31 04:40:13] 2026-03-31 02:39:42,025 | INFO     | did not find any defunct processes belonging to 2090359
[2026-03-31 04:40:13] 2026-03-31 02:39:42,025 | INFO     | Ready for new job
[2026-03-31 04:40:13] 2026-03-31 02:39:42,026 | INFO     | **************************************
[2026-03-31 04:40:13] 2026-03-31 02:39:42,026 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 04:40:13] 2026-03-31 02:39:42,026 | INFO     | **************************************
[2026-03-31 04:40:13] 2026-03-31 02:39:42,026 | INFO     | 
[2026-03-31 04:40:13] 2026-03-31 02:39:42,027 | INFO     | architecture information:
[2026-03-31 04:40:13] 2026-03-31 02:39:42,027 | INFO     | executing command: cat /etc/os-release
[2026-03-31 04:40:13] 2026-03-31 02:39:42,036 | INFO     | cat /etc/os-release:
[2026-03-31 04:40:13] NAME="CentOS Linux"
[2026-03-31 04:40:13] VERSION="7 (Core)"
[2026-03-31 04:40:13] ID="centos"
[2026-03-31 04:40:13] ID_LIKE="rhel fedora"
[2026-03-31 04:40:13] VERSION_ID="7"
[2026-03-31 04:40:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 04:40:13] ANSI_COLOR="0;31"
[2026-03-31 04:40:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 04:40:13] HOME_URL="https://www.centos.org/"
[2026-03-31 04:40:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 04:40:13] 
[2026-03-31 04:40:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 04:40:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 04:40:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 04:40:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 04:40:13] 
[2026-03-31 04:40:13] 2026-03-31 02:39:42,036 | INFO     | **************************************
[2026-03-31 04:40:13] 2026-03-31 02:39:42,539 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-31 04:40:13] 2026-03-31 02:39:42,550 | INFO     | sufficient remaining disk space (43091230720 B)
[2026-03-31 04:40:13] 2026-03-31 02:39:42,550 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 04:40:13] 2026-03-31 02:39:42,550 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 04:40:13] 2026-03-31 02:39:42,550 | INFO     | update_server=False
[2026-03-31 04:40:13] 2026-03-31 02:39:42,550 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 04:40:13] 2026-03-31 02:39:42,550 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 04:40:13] 2026-03-31 02:39:42,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 04:40:13] 2026-03-31 02:39:42,781 | INFO     | all payload control threads have been joined
[2026-03-31 04:40:13] 2026-03-31 02:39:43,273 | INFO     | all data control threads have been joined
[2026-03-31 04:40:13] 2026-03-31 02:39:43,556 | INFO     | [job] retrieve thread has finished
[2026-03-31 04:40:13] 2026-03-31 02:39:43,556 | INFO     | [job] queue monitor thread has finished
[2026-03-31 04:40:13] 2026-03-31 02:39:43,787 | INFO     | [payload] control thread has finished
[2026-03-31 04:40:13] 2026-03-31 02:39:43,854 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 04:40:13] 2026-03-31 02:39:43,859 | WARNING  | process 2090359 can no longer be monitored (due to stat problems) - aborting
[2026-03-31 04:40:13] 2026-03-31 02:39:43,892 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 04:40:13] 2026-03-31 02:39:43,931 | INFO     | number of running child processes to parent process 2090359: 1
[2026-03-31 04:40:13] 2026-03-31 02:39:43,931 | INFO     | maximum number of monitored processes: 6
[2026-03-31 04:40:13] 2026-03-31 02:39:43,931 | INFO     | aborting job monitoring since job object (job id=7074511499) has expired
[2026-03-31 04:40:13] 2026-03-31 02:39:43,931 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 04:40:13] 2026-03-31 02:39:43,931 | INFO     | will abort loop
[2026-03-31 04:40:13] 2026-03-31 02:39:43,997 | INFO     | [job] validate thread has finished
[2026-03-31 04:40:13] 2026-03-31 02:39:44,167 | INFO     | all job control threads have been joined
[2026-03-31 04:40:13] 2026-03-31 02:39:44,190 | INFO     | [payload] validate_post thread has finished
[2026-03-31 04:40:13] 2026-03-31 02:39:44,207 | INFO     | job.realtimelogging is not enabled
[2026-03-31 04:40:13] 2026-03-31 02:39:44,278 | INFO     | [data] control thread has finished
[2026-03-31 04:40:13] 2026-03-31 02:39:44,362 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 04:40:13] 2026-03-31 02:39:44,393 | INFO     | [data] copytool_in thread has finished
[2026-03-31 04:40:13] 2026-03-31 02:39:44,459 | INFO     | [payload] failed_post thread has finished
[2026-03-31 04:40:13] 2026-03-31 02:39:44,512 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 04:40:13] 2026-03-31 02:39:44,556 | INFO     | [data] copytool_out thread has finished
[2026-03-31 04:40:13] 2026-03-31 02:39:44,743 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 04:40:13] 2026-03-31 02:39:44,937 | INFO     | [job] job monitor thread has finished
[2026-03-31 04:40:13] 2026-03-31 02:39:45,172 | INFO     | [job] control thread has finished
[2026-03-31 04:40:13] 2026-03-31 02:39:45,213 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 04:40:13] 2026-03-31 02:39:48,748 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 04:40:13] 2026-03-31 02:40:03,988 | INFO     | [monitor] cgroup control has ended
[2026-03-31 04:40:13] 2026-03-31 02:40:05,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140716588390208)>', '<ExcThread(monitor, started 140715879298816)>']
[2026-03-31 04:40:13] 2026-03-31 02:40:10,929 | INFO     | all workflow threads have been joined
[2026-03-31 04:40:13] 2026-03-31 02:40:10,929 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 04:40:13] 2026-03-31 02:40:10,929 | INFO     | traces error code: 0
[2026-03-31 04:40:13] 2026-03-31 02:40:10,929 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 04:40:13] 2026-03-31 02:40:13,642 | INFO     | PID=2085892 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-31 04:40:13] 2026-03-31 02:40:13,643 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 04:40:13] 2026-03-31 02:40:13,643 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 04:40:13] 2026-03-31 02:40:13,643 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 04:40:13] 2026-03-31 02:40:13,643 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 04:40:13] 2026-03-31 02:40:13,643 | INFO     | [monitor] control thread has ended
[2026-03-31 04:40:13] 2026-03-31 02:40:13,689 [wrapper] ==== pilot stdout END ====
[2026-03-31 04:40:13] 2026-03-31 02:40:13,693 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 04:40:13] 2026-03-31 02:40:13,697 [wrapper] pilotpid: 2085892
[2026-03-31 04:40:13] 2026-03-31 02:40:13,700 [wrapper] Pilot exit status: 0
[2026-03-31 04:40:13] 2026-03-31 02:40:13,710 [wrapper] pandaids: 7074511499
[2026-03-31 04:40:13] 2026-03-31 02:40:13,727 [wrapper] cleanup supervisor_pilot 2098388 2085893
[2026-03-31 04:40:13] 2026-03-31 02:40:13,730 [wrapper] Test setup, not cleaning
[2026-03-31 04:40:13] 2026-03-31 02:40:13,733 [wrapper] apfmon messages muted
[2026-03-31 04:40:13] 2026-03-31 02:40:13,735 [wrapper] ==== wrapper stdout END ====
[2026-03-31 04:40:13] 2026-03-31 02:40:13,738 [wrapper] ==== wrapper stderr END ====
[2026-03-31 04:40:13]  *** Error codes and diagnostics ***
[2026-03-31 04:40:13]     "exeErrorCode": 0,
[2026-03-31 04:40:13]     "pilotErrorCode": 0,
[2026-03-31 04:40:13]  *** Listing of results directory ***
[2026-03-31 04:40:13] total 462188
[2026-03-31 04:40:13] -rw-r--r-- 1 boinc boinc    644034 Mar 30 22:07 pilot3.tar.gz
[2026-03-31 04:40:13] -rwx------ 1 boinc boinc     36322 Mar 30 22:07 runpilot2-wrapper.sh
[2026-03-31 04:40:13] -rw-r--r-- 1 boinc boinc      5118 Mar 30 22:07 queuedata.json
[2026-03-31 04:40:13] -rw-r--r-- 1 boinc boinc       100 Mar 31 01:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 04:40:13] -rwxr-xr-x 1 boinc boinc      7986 Mar 31 01:59 run_atlas
[2026-03-31 04:40:13] -rw-r--r-- 1 boinc boinc       105 Mar 31 01:59 job.xml
[2026-03-31 04:40:13] -rw-r--r-- 2 boinc boinc 252230712 Mar 31 01:59 EVNT.49123623._000001.pool.root.1
[2026-03-31 04:40:13] -rw-r--r-- 2 boinc boinc    656749 Mar 31 01:59 input.tar.gz
[2026-03-31 04:40:13] -rw-r--r-- 2 boinc boinc     15845 Mar 31 01:59 start_atlas.sh
[2026-03-31 04:40:13] drwxrwx--x 2 boinc boinc      4096 Mar 31 01:59 shared
[2026-03-31 04:40:13] -rw-r--r-- 1 boinc boinc         0 Mar 31 01:59 boinc_setup_complete
[2026-03-31 04:40:13] -rw-r--r-- 1 boinc boinc      6196 Mar 31 01:59 init_data.xml
[2026-03-31 04:40:13] -rw-r--r-- 1 boinc boinc         0 Mar 31 01:59 boinc_lockfile
[2026-03-31 04:40:13] -rw-r--r-- 1 boinc boinc      2617 Mar 31 01:59 pandaJob.out
[2026-03-31 04:40:13] -rw------- 1 boinc boinc   1004000 Mar 31 01:59 agis_schedconf.cvmfs.json
[2026-03-31 04:40:13] -rw------- 1 boinc boinc   1511579 Mar 31 01:59 agis_ddmendpoints.agis.ALL.json
[2026-03-31 04:40:13] -rw------- 1 boinc boinc       427 Mar 31 01:59 workernode_map.json
[2026-03-31 04:40:13] drwx------ 5 boinc boinc      4096 Mar 31 01:59 pilot3
[2026-03-31 04:40:13] -rw------- 1 boinc boinc 214658437 Mar 31 04:39 HITS.49268897._000081.pool.root.1
[2026-03-31 04:40:13] -rw-r--r-- 1 boinc boinc       529 Mar 31 04:39 boinc_task_state.xml
[2026-03-31 04:40:13] -rw------- 1 boinc boinc      1020 Mar 31 04:39 memory_monitor_summary.json
[2026-03-31 04:40:13] -rw------- 1 boinc boinc        95 Mar 31 04:39 pilot_heartbeat.json
[2026-03-31 04:40:13] -rw------- 1 boinc boinc    266573 Mar 31 04:39 log.49268897._000081.job.log.tgz.1
[2026-03-31 04:40:13] -rw------- 1 boinc boinc      6308 Mar 31 04:39 heartbeat_new.json
[2026-03-31 04:40:13] -rw------- 1 boinc boinc      6199 Mar 31 04:39 heartbeat.json
[2026-03-31 04:40:13] -rw-r--r-- 1 boinc boinc      8192 Mar 31 04:40 boinc_mmap_file
[2026-03-31 04:40:13] -rw-r--r-- 1 boinc boinc        27 Mar 31 04:40 wrapper_checkpoint.txt
[2026-03-31 04:40:13] -rw------- 1 boinc boinc       747 Mar 31 04:40 pilotlog.txt
[2026-03-31 04:40:13] -rw------- 1 boinc boinc    901404 Mar 31 04:40 log.49268897._000081.job.log.1
[2026-03-31 04:40:13] -rw------- 1 boinc boinc       357 Mar 31 04:40 output.list
[2026-03-31 04:40:13] -rw-r--r-- 1 boinc boinc       620 Mar 31 04:40 runtime_log
[2026-03-31 04:40:13] -rw------- 1 boinc boinc   1187840 Mar 31 04:40 result.tar.gz
[2026-03-31 04:40:13] -rw-r--r-- 1 boinc boinc      8901 Mar 31 04:40 runtime_log.err
[2026-03-31 04:40:13] -rw------- 1 boinc boinc       659 Mar 31 04:40 dtsKDmc4XR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDm9hOKDmOCR0km.diag
[2026-03-31 04:40:13] -rw-r--r-- 1 boinc boinc     10266 Mar 31 04:40 stderr.txt
[2026-03-31 04:40:13] HITS file was successfully produced:
[2026-03-31 04:40:13] -rw------- 1 boinc boinc 214658437 Mar 31 04:39 shared/HITS.pool.root.1
[2026-03-31 04:40:13]  *** Contents of shared directory: ***
[2026-03-31 04:40:13] total 457776
[2026-03-31 04:40:13] -rw-r--r-- 2 boinc boinc 252230712 Mar 31 01:59 ATLAS.root_0
[2026-03-31 04:40:13] -rw-r--r-- 2 boinc boinc    656749 Mar 31 01:59 input.tar.gz
[2026-03-31 04:40:13] -rw-r--r-- 2 boinc boinc     15845 Mar 31 01:59 start_atlas.sh
[2026-03-31 04:40:13] -rw------- 1 boinc boinc 214658437 Mar 31 04:39 HITS.pool.root.1
[2026-03-31 04:40:13] -rw------- 1 boinc boinc   1187840 Mar 31 04:40 result.tar.gz
04:40:15 (2081843): run_atlas exited; CPU time 27818.868164
04:40:15 (2081843): called boinc_finish(0)

</stderr_txt>
]]>

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