Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:39:45 (1653): wrapper (7.7.26015): starting
23:39:45 (1653): wrapper: running run_atlas (--nthreads 8)
[2026-03-30 23:39:45] Arguments: --nthreads 8
[2026-03-30 23:39:45] Threads: 8
[2026-03-30 23:39:45] Checking for CVMFS
[2026-03-30 23:39:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 23:39:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 23:39:45] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 23:39:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 23:39:45] 2.11.0.0 11239 38197 65264 157897 2 188 3365512 4096001 917 130560 1 4420429 99.533 3175195 282 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-30 23:39:45] CVMFS is ok
[2026-03-30 23:39:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 23:39:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 23:39:45] Further information can be found at the LHC@home message board.
[2026-03-30 23:39:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 23:39:45] Checking for apptainer binary...
[2026-03-30 23:39:45] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-30 23:39:45] apptainer is not installed, using version from CVMFS
[2026-03-30 23:39:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 23:39:45] WARNING: Environment variable TMPDIR already has value [/tmp/job_11438767/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node333
[2026-03-30 23:39:45] apptainer works
[2026-03-30 23:39:45] Set ATHENA_PROC_NUMBER=8
[2026-03-30 23:39:45] Set ATHENA_CORE_NUMBER=8
[2026-03-30 23:39:45] Starting ATLAS job with PandaID=7074344992
[2026-03-30 23:39:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11438767/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 00:33:04]  *** The last 200 lines of the pilot log: ***
[2026-03-31 00:33:04]  domain=
[2026-03-31 00:33:04]  filesize=294329
[2026-03-31 00:33:04]  filetype=log
[2026-03-31 00:33:04]  guid=0325848f-033f-4eab-8153-5d1c1eaca1d8
[2026-03-31 00:33:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-31 00:33:04]  is_altstaged=None
[2026-03-31 00:33:04]  is_tar=False
[2026-03-31 00:33:04]  lfn=log.49499526._000068.job.log.tgz.1
[2026-03-31 00:33:04]  mtime=0
[2026-03-31 00:33:04]  protocol_id=None
[2026-03-31 00:33:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-31 00:33:04]  replicas=None
[2026-03-31 00:33:04]  scope=mc23_13p6TeV
[2026-03-31 00:33:04]  status=None
[2026-03-31 00:33:04]  status_code=0
[2026-03-31 00:33:04]  storage_token=
[2026-03-31 00:33:04]  surl=/tmp/job_11438767/atlas/pilot/slots/0/PanDA_Pilot-7074344992/log.49499526._000068.job.log.tgz.1
[2026-03-31 00:33:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/34/log.49499526._000068.job.log.tgz.1
[2026-03-31 00:33:04]  workdir=None
[2026-03-31 00:33:04] ]
[2026-03-31 00:33:04] 2026-03-30 22:32:31,556 | INFO     | transferring file log.49499526._000068.job.log.tgz.1 from /tmp/job_11438767/atlas/pilot/slots/0/PanDA_Pilot-7074344992/log.49499526._000068.job.log.tgz.1 to /tmp/j
[2026-03-31 00:33:04] 2026-03-30 22:32:31,556 | INFO     | executing command: /usr/bin/env mv /tmp/job_11438767/atlas/pilot/slots/0/PanDA_Pilot-7074344992/log.49499526._000068.job.log.tgz.1 /tmp/job_11438767/atlas/pilot/sl
[2026-03-31 00:33:04] 2026-03-30 22:32:31,564 | INFO     | adding to output.list: log.49499526._000068.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/34/log.49499526._000068.job.log.tg
[2026-03-31 00:33:04] 2026-03-30 22:32:31,565 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-31 00:33:04] 2026-03-30 22:32:31,565 | INFO     | summary of transferred files:
[2026-03-31 00:33:04] 2026-03-30 22:32:31,565 | INFO     |  -- lfn=log.49499526._000068.job.log.tgz.1, status_code=0, status=transferred
[2026-03-31 00:33:04] 2026-03-30 22:32:31,565 | INFO     | stage-out finished correctly
[2026-03-31 00:33:04] 2026-03-30 22:32:32,196 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-31 00:33:04] 2026-03-30 22:32:32,241 | INFO     | job 7074344992 has state=finished
[2026-03-31 00:33:04] 2026-03-30 22:32:32,241 | INFO     | preparing for final server update for job 7074344992 in state='finished'
[2026-03-31 00:33:04] 2026-03-30 22:32:32,241 | INFO     | reading metadata from: /tmp/job_11438767/atlas/pilot/slots/0/PanDA_Pilot-7074344992/jobReport.json
[2026-03-31 00:33:04] 2026-03-30 22:32:32,243 | INFO     | added worker_node to metadata from /tmp/job_11438767/atlas/pilot/slots/0/workernode_map.json
[2026-03-31 00:33:04] 2026-03-30 22:32:32,243 | INFO     | this job has now completed (state=finished)
[2026-03-31 00:33:04] 2026-03-30 22:32:32,243 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 00:33:04] 2026-03-30 22:32:32,243 | INFO     | log transfer has been attempted: DONE
[2026-03-31 00:33:04] 2026-03-30 22:32:32,243 | INFO     | job 7074344992 has finished - writing final server update
[2026-03-31 00:33:04] 2026-03-30 22:32:32,243 | INFO     | total number of processed events: 400 (read)
[2026-03-31 00:33:04] 2026-03-30 22:32:32,260 | INFO     | using path: /tmp/job_11438767/atlas/pilot/slots/0/PanDA_Pilot-7074344992/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 00:33:04] 2026-03-30 22:32:32,261 | INFO     | extracted standard info from prmon json
[2026-03-31 00:33:04] 2026-03-30 22:32:32,261 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 00:33:04] 2026-03-30 22:32:32,261 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 00:33:04] 2026-03-30 22:32:32,261 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 00:33:04] 2026-03-30 22:32:32,262 | INFO     | fitting pss+swap vs Time
[2026-03-31 00:33:04] 2026-03-30 22:32:32,262 | INFO     | sum of square deviations: 28242390.0
[2026-03-31 00:33:04] 2026-03-30 22:32:32,262 | INFO     | sum of deviations: -3022378894.9999995
[2026-03-31 00:33:04] 2026-03-30 22:32:32,262 | INFO     | mean x (centered): 0.0
[2026-03-31 00:33:04] 2026-03-30 22:32:32,262 | INFO     | mean y: 2647786.111111111
[2026-03-31 00:33:04] 2026-03-30 22:32:32,262 | INFO     | intersect: 2647786.111111111
[2026-03-31 00:33:04] 2026-03-30 22:32:32,262 | INFO     | chi2: 0.013884919084186532
[2026-03-31 00:33:04] 2026-03-30 22:32:32,262 | INFO     | current memory leak: -107.02 B/s (using 45 data points, chi2=0.01)
[2026-03-31 00:33:04] 2026-03-30 22:32:32,262 | INFO     | could have reported an average CPU frequency of 2488 MHz (5 samples)
[2026-03-31 00:33:04] 2026-03-30 22:32:32,262 | INFO     | ..............................
[2026-03-31 00:33:04] 2026-03-30 22:32:32,262 | INFO     | . Timing measurements:
[2026-03-31 00:33:04] 2026-03-30 22:32:32,262 | INFO     | . get job = 0 s
[2026-03-31 00:33:04] 2026-03-30 22:32:32,262 | INFO     | . initial setup = 2 s
[2026-03-31 00:33:04] 2026-03-30 22:32:32,262 | INFO     | . payload setup = 3 s
[2026-03-31 00:33:04] 2026-03-30 22:32:32,262 | INFO     | . stage-in = 0 s
[2026-03-31 00:33:04] 2026-03-30 22:32:32,263 | INFO     | . payload execution = 3141 s
[2026-03-31 00:33:04] 2026-03-30 22:32:32,263 | INFO     | . stage-out = 0 s
[2026-03-31 00:33:04] 2026-03-30 22:32:32,263 | INFO     | . log creation = 0 s
[2026-03-31 00:33:04] 2026-03-30 22:32:32,263 | INFO     | ..............................
[2026-03-31 00:33:04] 2026-03-30 22:32:32,490 | INFO     | 
[2026-03-31 00:33:04] 2026-03-30 22:32:32,490 | INFO     | job summary report
[2026-03-31 00:33:04] 2026-03-30 22:32:32,490 | INFO     | --------------------------------------------------
[2026-03-31 00:33:04] 2026-03-30 22:32:32,490 | INFO     | PanDA job id: 7074344992
[2026-03-31 00:33:04] 2026-03-30 22:32:32,490 | INFO     | task id: 49499526
[2026-03-31 00:33:04] 2026-03-30 22:32:32,490 | INFO     | errors: (none)
[2026-03-31 00:33:04] 2026-03-30 22:32:32,490 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 00:33:04] 2026-03-30 22:32:32,490 | INFO     | pilot state: finished 
[2026-03-31 00:33:04] 2026-03-30 22:32:32,490 | INFO     | transexitcode: 0
[2026-03-31 00:33:04] 2026-03-30 22:32:32,490 | INFO     | exeerrorcode: 0
[2026-03-31 00:33:04] 2026-03-30 22:32:32,490 | INFO     | exeerrordiag: 
[2026-03-31 00:33:04] 2026-03-30 22:32:32,491 | INFO     | exitcode: 0
[2026-03-31 00:33:04] 2026-03-30 22:32:32,491 | INFO     | exitmsg: OK
[2026-03-31 00:33:04] 2026-03-30 22:32:32,491 | INFO     | cpuconsumptiontime: 21647 s
[2026-03-31 00:33:04] 2026-03-30 22:32:32,491 | INFO     | nevents: 400
[2026-03-31 00:33:04] 2026-03-30 22:32:32,491 | INFO     | neventsw: 0
[2026-03-31 00:33:04] 2026-03-30 22:32:32,491 | INFO     | pid: 12439
[2026-03-31 00:33:04] 2026-03-30 22:32:32,491 | INFO     | pgrp: 12439
[2026-03-31 00:33:04] 2026-03-30 22:32:32,491 | INFO     | corecount: 8
[2026-03-31 00:33:04] 2026-03-30 22:32:32,491 | INFO     | event service: False
[2026-03-31 00:33:04] 2026-03-30 22:32:32,491 | INFO     | sizes: {0: 2280098, 1: 2281728, 11: 2281756, 3148: 2307333, 3149: 2316361, 3150: 2316771}
[2026-03-31 00:33:04] 2026-03-30 22:32:32,491 | INFO     | --------------------------------------------------
[2026-03-31 00:33:04] 2026-03-30 22:32:32,491 | INFO     | 
[2026-03-31 00:33:04] 2026-03-30 22:32:32,491 | INFO     | executing command: ls -lF /tmp/job_11438767/atlas/pilot/slots/0
[2026-03-31 00:33:04] 2026-03-30 22:32:32,501 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,501 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,501 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,501 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | job 7074344992 has completed (purged errors)
[2026-03-31 00:33:04] 2026-03-30 22:32:32,502 | INFO     | overall cleanup function is called
[2026-03-31 00:33:04] 2026-03-30 22:32:33,508 | INFO     | --- collectZombieJob: --- 10, [12439]
[2026-03-31 00:33:04] 2026-03-30 22:32:33,508 | INFO     | zombie collector waiting for pid 12439
[2026-03-31 00:33:04] 2026-03-30 22:32:33,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 00:33:04] 2026-03-30 22:32:33,508 | INFO     | collected zombie processes
[2026-03-31 00:33:04] 2026-03-30 22:32:33,508 | INFO     | will attempt to kill all subprocesses of pid=12439
[2026-03-31 00:33:04] 2026-03-30 22:32:33,607 | INFO     | process IDs to be killed: [12439] (in reverse order)
[2026-03-31 00:33:04] 2026-03-30 22:32:33,645 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 00:33:04] 2026-03-30 22:32:33,645 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 00:33:04] 2026-03-30 22:32:33,648 | INFO     | did not find any defunct processes belonging to 12439
[2026-03-31 00:33:04] 2026-03-30 22:32:33,651 | INFO     | did not find any defunct processes belonging to 12439
[2026-03-31 00:33:04] 2026-03-30 22:32:33,651 | INFO     | Ready for new job
[2026-03-31 00:33:04] 2026-03-30 22:32:33,652 | INFO     | **************************************
[2026-03-31 00:33:04] 2026-03-30 22:32:33,652 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 00:33:04] 2026-03-30 22:32:33,652 | INFO     | **************************************
[2026-03-31 00:33:04] 2026-03-30 22:32:33,652 | INFO     | 
[2026-03-31 00:33:04] 2026-03-30 22:32:33,666 | INFO     | architecture information:
[2026-03-31 00:33:04] 2026-03-30 22:32:33,666 | INFO     | executing command: cat /etc/os-release
[2026-03-31 00:33:04] 2026-03-30 22:32:33,673 | INFO     | cat /etc/os-release:
[2026-03-31 00:33:04] NAME="CentOS Linux"
[2026-03-31 00:33:04] VERSION="7 (Core)"
[2026-03-31 00:33:04] ID="centos"
[2026-03-31 00:33:04] ID_LIKE="rhel fedora"
[2026-03-31 00:33:04] VERSION_ID="7"
[2026-03-31 00:33:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 00:33:04] ANSI_COLOR="0;31"
[2026-03-31 00:33:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 00:33:04] HOME_URL="https://www.centos.org/"
[2026-03-31 00:33:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 00:33:04] 
[2026-03-31 00:33:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 00:33:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 00:33:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 00:33:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 00:33:04] 
[2026-03-31 00:33:04] 2026-03-30 22:32:33,673 | INFO     | **************************************
[2026-03-31 00:33:04] 2026-03-30 22:32:34,176 | INFO     | executing command: df -mP /tmp/job_11438767/atlas/pilot/slots/0
[2026-03-31 00:33:04] 2026-03-30 22:32:34,185 | INFO     | sufficient remaining disk space (224775897088 B)
[2026-03-31 00:33:04] 2026-03-30 22:32:34,185 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 00:33:04] 2026-03-30 22:32:34,185 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 00:33:04] 2026-03-30 22:32:34,185 | INFO     | update_server=False
[2026-03-31 00:33:04] 2026-03-30 22:32:34,185 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 00:33:04] 2026-03-30 22:32:34,185 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 00:33:04] 2026-03-30 22:32:34,185 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 00:33:04] 2026-03-30 22:32:34,210 | WARNING  | process 12439 can no longer be monitored (due to stat problems) - aborting
[2026-03-31 00:33:04] 2026-03-30 22:32:34,289 | INFO     | using path: /tmp/job_11438767/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 00:33:04] 2026-03-30 22:32:34,315 | INFO     | all job control threads have been joined
[2026-03-31 00:33:04] 2026-03-30 22:32:34,381 | INFO     | number of running child processes to parent process 12439: 1
[2026-03-31 00:33:04] 2026-03-30 22:32:34,381 | INFO     | maximum number of monitored processes: 6
[2026-03-31 00:33:04] 2026-03-30 22:32:34,381 | INFO     | aborting job monitoring since job object (job id=7074344992) has expired
[2026-03-31 00:33:04] 2026-03-30 22:32:34,381 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 00:33:04] 2026-03-30 22:32:34,381 | INFO     | will abort loop
[2026-03-31 00:33:04] 2026-03-30 22:32:34,438 | INFO     | all data control threads have been joined
[2026-03-31 00:33:04] 2026-03-30 22:32:34,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 00:33:04] 2026-03-30 22:32:35,190 | INFO     | [job] retrieve thread has finished
[2026-03-31 00:33:04] 2026-03-30 22:32:35,191 | INFO     | [job] queue monitor thread has finished
[2026-03-31 00:33:04] 2026-03-30 22:32:35,196 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 00:33:04] 2026-03-30 22:32:35,320 | INFO     | [job] control thread has finished
[2026-03-31 00:33:04] 2026-03-30 22:32:35,386 | INFO     | [job] job monitor thread has finished
[2026-03-31 00:33:04] 2026-03-30 22:32:35,400 | INFO     | [payload] validate_post thread has finished
[2026-03-31 00:33:04] 2026-03-30 22:32:35,443 | INFO     | [data] control thread has finished
[2026-03-31 00:33:04] 2026-03-30 22:32:35,443 | INFO     | all payload control threads have been joined
[2026-03-31 00:33:04] 2026-03-30 22:32:35,461 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 00:33:04] 2026-03-30 22:32:35,470 | INFO     | [data] copytool_in thread has finished
[2026-03-31 00:33:04] 2026-03-30 22:32:36,167 | INFO     | [job] validate thread has finished
[2026-03-31 00:33:04] 2026-03-30 22:32:36,405 | INFO     | [payload] failed_post thread has finished
[2026-03-31 00:33:04] 2026-03-30 22:32:36,448 | INFO     | [payload] control thread has finished
[2026-03-31 00:33:04] 2026-03-30 22:32:36,479 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 00:33:04] 2026-03-30 22:32:36,542 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 00:33:04] 2026-03-30 22:32:36,627 | INFO     | [data] copytool_out thread has finished
[2026-03-31 00:33:04] 2026-03-30 22:32:38,191 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 00:33:04] 2026-03-30 22:32:56,377 | INFO     | [monitor] cgroup control has ended
[2026-03-31 00:33:04] 2026-03-30 22:32:57,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-31 00:33:04] 2026-03-30 22:33:02,628 | INFO     | all workflow threads have been joined
[2026-03-31 00:33:04] 2026-03-30 22:33:02,628 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 00:33:04] 2026-03-30 22:33:02,628 | INFO     | traces error code: 0
[2026-03-31 00:33:04] 2026-03-30 22:33:02,628 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 00:33:04] 2026-03-30 22:33:03,912 | INFO     | PID=6330 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-31 00:33:04] 2026-03-30 22:33:03,912 | INFO     | .. there are 3 such processes running
[2026-03-31 00:33:04] 2026-03-30 22:33:03,912 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 00:33:04] 2026-03-30 22:33:03,912 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 00:33:04] 2026-03-30 22:33:03,912 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 00:33:04] 2026-03-30 22:33:03,912 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 00:33:04] 2026-03-30 22:33:03,912 | INFO     | [monitor] control thread has ended
[2026-03-31 00:33:04] 2026-03-30 22:33:03,964 [wrapper] ==== pilot stdout END ====
[2026-03-31 00:33:04] 2026-03-30 22:33:03,966 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 00:33:04] 2026-03-30 22:33:03,967 [wrapper] pilotpid: 6330
[2026-03-31 00:33:04] 2026-03-30 22:33:03,968 [wrapper] Pilot exit status: 0
[2026-03-31 00:33:04] 2026-03-30 22:33:03,972 [wrapper] pandaids: 7074344992
[2026-03-31 00:33:04] 2026-03-30 22:33:03,995 [wrapper] cleanup supervisor_pilot 27524 6331
[2026-03-31 00:33:04] 2026-03-30 22:33:03,997 [wrapper] Test setup, not cleaning
[2026-03-31 00:33:04] 2026-03-30 22:33:03,998 [wrapper] apfmon messages muted
[2026-03-31 00:33:04] 2026-03-30 22:33:03,999 [wrapper] ==== wrapper stdout END ====
[2026-03-31 00:33:04] 2026-03-30 22:33:04,000 [wrapper] ==== wrapper stderr END ====
[2026-03-31 00:33:04]  *** Error codes and diagnostics ***
[2026-03-31 00:33:04]     "exeErrorCode": 0,
[2026-03-31 00:33:04]     "pilotErrorCode": 0,
[2026-03-31 00:33:04]  *** Listing of results directory ***
[2026-03-31 00:33:04] total 436924
[2026-03-31 00:33:04] -rwx------ 1 mf493845 unix-user     36322 Mar 30 18:47 runpilot2-wrapper.sh
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user      5118 Mar 30 18:47 queuedata.json
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user    644034 Mar 30 18:47 pilot3.tar.gz
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user       100 Mar 30 22:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 00:33:04] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 30 22:32 run_atlas
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user       105 Mar 30 22:32 job.xml
[2026-03-31 00:33:04] -rw-r--r-- 2 mf493845 unix-user 264371122 Mar 30 23:39 EVNT.49474319._000003.pool.root.1
[2026-03-31 00:33:04] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 30 23:39 start_atlas.sh
[2026-03-31 00:33:04] drwxrwx--x 2 mf493845 unix-user       100 Mar 30 23:39 shared
[2026-03-31 00:33:04] -rw-r--r-- 2 mf493845 unix-user    656735 Mar 30 23:39 input.tar.gz
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user      6390 Mar 30 23:39 init_data.xml
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user         0 Mar 30 23:39 boinc_setup_complete
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user      8192 Mar 30 23:39 boinc_mmap_file
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user         0 Mar 30 23:39 boinc_lockfile
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user      2586 Mar 30 23:39 pandaJob.out
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user   1004000 Mar 30 23:39 agis_schedconf.cvmfs.json
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user   1511579 Mar 30 23:39 agis_ddmendpoints.agis.ALL.json
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user       416 Mar 30 23:39 workernode_map.json
[2026-03-31 00:33:04] drwx------ 5 mf493845 unix-user       480 Mar 30 23:39 pilot3
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user 177729189 Mar 31 00:32 HITS.49499526._000068.pool.root.1
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user        95 Mar 31 00:32 pilot_heartbeat.json
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user      1013 Mar 31 00:32 memory_monitor_summary.json
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user    294329 Mar 31 00:32 log.49499526._000068.job.log.tgz.1
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user      6320 Mar 31 00:32 heartbeat_new.json
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user      6210 Mar 31 00:32 heartbeat.json
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user       819 Mar 31 00:33 pilotlog.txt
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user    346534 Mar 31 00:33 log.49499526._000068.job.log.1
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user       357 Mar 31 00:33 output.list
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user       620 Mar 31 00:33 runtime_log
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user    655360 Mar 31 00:33 result.tar.gz
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user      9219 Mar 31 00:33 runtime_log.err
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user       642 Mar 31 00:33 MNpLDmZxUR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmuBOKDmdncUMo.diag
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user     21576 Mar 31 00:33 stderr.txt
[2026-03-31 00:33:04] HITS file was successfully produced:
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user 177729189 Mar 31 00:32 shared/HITS.pool.root.1
[2026-03-31 00:33:04]  *** Contents of shared directory: ***
[2026-03-31 00:33:04] total 433040
[2026-03-31 00:33:04] -rw-r--r-- 2 mf493845 unix-user 264371122 Mar 30 23:39 ATLAS.root_0
[2026-03-31 00:33:04] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 30 23:39 start_atlas.sh
[2026-03-31 00:33:04] -rw-r--r-- 2 mf493845 unix-user    656735 Mar 30 23:39 input.tar.gz
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user 177729189 Mar 31 00:32 HITS.pool.root.1
[2026-03-31 00:33:04] -rw------- 1 mf493845 unix-user    655360 Mar 31 00:33 result.tar.gz
00:33:05 (1653): run_atlas exited; CPU time 21687.964852
00:33:05 (1653): called boinc_finish(0)

</stderr_txt>
]]>

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