Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:48:29 (445706): wrapper (7.7.26015): starting
07:48:29 (445706): wrapper: running run_atlas (--nthreads 4)
[2026-04-01 07:48:30] Arguments: --nthreads 4
[2026-04-01 07:48:30] Threads: 4
[2026-04-01 07:48:30] Checking for CVMFS
[2026-04-01 07:48:30] No cvmfs_config command found, will try listing directly
[2026-04-01 07:48:30] CVMFS is ok
[2026-04-01 07:48:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-01 07:48:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-01 07:48:30] Further information can be found at the LHC@home message board.
[2026-04-01 07:48:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 07:48:30] Checking for apptainer binary...
[2026-04-01 07:48:30] which: no apptainer in ((null))
[2026-04-01 07:48:30] apptainer is not installed, using version from CVMFS
[2026-04-01 07:48:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 07:48:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-04-01 07:48:30] apptainer works
[2026-04-01 07:48:30] Set ATHENA_PROC_NUMBER=4
[2026-04-01 07:48:30] Set ATHENA_CORE_NUMBER=4
[2026-04-01 07:48:30] Starting ATLAS job with PandaID=7072264218
[2026-04-01 07:48:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 11:05:19]  *** The last 200 lines of the pilot log: ***
[2026-04-01 11:05:19] 2026-04-01 09:04:45,655 | INFO     | this job has now completed (state=finished)
[2026-04-01 11:05:19] 2026-04-01 09:04:45,655 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-01 11:05:19] 2026-04-01 09:04:45,656 | INFO     | log transfer has been attempted: DONE
[2026-04-01 11:05:19] 2026-04-01 09:04:45,656 | INFO     | job 7072264218 has finished - writing final server update
[2026-04-01 11:05:19] 2026-04-01 09:04:45,656 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3521838/.job.ad'
[2026-04-01 11:05:19] 2026-04-01 09:04:45,656 | INFO     | total number of processed events: 400 (read)
[2026-04-01 11:05:19] 2026-04-01 09:04:45,670 | INFO     | using path: /var/lib/boinc/var/slot28/slots/3/PanDA_Pilot-7072264218/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 11:05:19] 2026-04-01 09:04:45,670 | INFO     | extracted standard info from prmon json
[2026-04-01 11:05:19] 2026-04-01 09:04:45,670 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 11:05:19] 2026-04-01 09:04:45,671 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 11:05:19] 2026-04-01 09:04:45,671 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 11:05:19] 2026-04-01 09:04:45,675 | INFO     | fitting pss+swap vs Time
[2026-04-01 11:05:19] 2026-04-01 09:04:45,675 | INFO     | sum of square deviations: 2229146912.0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,676 | INFO     | sum of deviations: 14002839811.000004
[2026-04-01 11:05:19] 2026-04-01 09:04:45,677 | INFO     | mean x (centered): 0.0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,677 | INFO     | mean y: 2306993.6269430052
[2026-04-01 11:05:19] 2026-04-01 09:04:45,677 | INFO     | intersect: 2306993.6269430052
[2026-04-01 11:05:19] 2026-04-01 09:04:45,677 | INFO     | chi2: 2.3559124044131856
[2026-04-01 11:05:19] 2026-04-01 09:04:45,678 | INFO     | sum of square deviations: 2060343747.0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,679 | INFO     | sum of deviations: 26834213601.000004
[2026-04-01 11:05:19] 2026-04-01 09:04:45,679 | INFO     | mean x (centered): 0.0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,679 | INFO     | mean y: 2318328.989361702
[2026-04-01 11:05:19] 2026-04-01 09:04:45,680 | INFO     | intersect: 2318328.989361702
[2026-04-01 11:05:19] 2026-04-01 09:04:45,680 | INFO     | chi2: 1.3620634456247989
[2026-04-01 11:05:19] 2026-04-01 09:04:45,680 | INFO     | current chi2=1.3620634456247989 (change=42.18531032506432 %)
[2026-04-01 11:05:19] 2026-04-01 09:04:45,680 | INFO     | sum of square deviations: 1900284932.0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,681 | INFO     | sum of deviations: 25930688372.000004
[2026-04-01 11:05:19] 2026-04-01 09:04:45,682 | INFO     | mean x (centered): 0.0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,682 | INFO     | mean y: 2317468.2841530056
[2026-04-01 11:05:19] 2026-04-01 09:04:45,682 | INFO     | intersect: 2317468.2841530056
[2026-04-01 11:05:19] 2026-04-01 09:04:45,682 | INFO     | chi2: 1.3629014906779395
[2026-04-01 11:05:19] 2026-04-01 09:04:45,682 | INFO     | current chi2=1.3629014906779395 (change=-0.0615276076773534 %)
[2026-04-01 11:05:19] 2026-04-01 09:04:45,682 | INFO     | right removable region: 182
[2026-04-01 11:05:19] 2026-04-01 09:04:45,683 | INFO     | sum of square deviations: 2060343747.0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,684 | INFO     | sum of deviations: -11078189748.0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,684 | INFO     | mean x (centered): 0.0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,684 | INFO     | mean y: 2329354.585106383
[2026-04-01 11:05:19] 2026-04-01 09:04:45,684 | INFO     | intersect: 2329354.585106383
[2026-04-01 11:05:19] 2026-04-01 09:04:45,685 | INFO     | chi2: 1.0327889146388767
[2026-04-01 11:05:19] 2026-04-01 09:04:45,685 | INFO     | current chi2=1.0327889146388767 (change=56.16182873759581 %)
[2026-04-01 11:05:19] 2026-04-01 09:04:45,685 | INFO     | sum of square deviations: 1900284932.0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,686 | INFO     | sum of deviations: -10124919201.999998
[2026-04-01 11:05:19] 2026-04-01 09:04:45,686 | INFO     | mean x (centered): 0.0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,687 | INFO     | mean y: 2328419.5792349726
[2026-04-01 11:05:19] 2026-04-01 09:04:45,687 | INFO     | intersect: 2328419.5792349726
[2026-04-01 11:05:19] 2026-04-01 09:04:45,687 | INFO     | chi2: 1.0280358882400678
[2026-04-01 11:05:19] 2026-04-01 09:04:45,687 | INFO     | current chi2=1.0280358882400678 (change=0.4602127628830001 %)
[2026-04-01 11:05:19] 2026-04-01 09:04:45,687 | INFO     | left removable region: 10
[2026-04-01 11:05:19] 2026-04-01 09:04:45,688 | INFO     | sum of square deviations: 1577789583.0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,689 | INFO     | sum of deviations: 2370418947.0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,689 | INFO     | mean x (centered): 0.0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,689 | INFO     | mean y: 2340689.988372093
[2026-04-01 11:05:19] 2026-04-01 09:04:45,689 | INFO     | intersect: 2340689.988372093
[2026-04-01 11:05:19] 2026-04-01 09:04:45,690 | INFO     | chi2: 0.006224504689003361
[2026-04-01 11:05:19] 2026-04-01 09:04:45,690 | INFO     | current memory leak: 1.50 B/s (using 172 data points, chi2=0.01)
[2026-04-01 11:05:19] 2026-04-01 09:04:45,690 | INFO     | could have reported an average CPU frequency of 2561 MHz (10 samples)
[2026-04-01 11:05:19] 2026-04-01 09:04:45,690 | INFO     | ..............................
[2026-04-01 11:05:19] 2026-04-01 09:04:45,691 | INFO     | . Timing measurements:
[2026-04-01 11:05:19] 2026-04-01 09:04:45,691 | INFO     | . get job = 0 s
[2026-04-01 11:05:19] 2026-04-01 09:04:45,691 | INFO     | . initial setup = 8 s
[2026-04-01 11:05:19] 2026-04-01 09:04:45,691 | INFO     | . payload setup = 13 s
[2026-04-01 11:05:19] 2026-04-01 09:04:45,691 | INFO     | . stage-in = 0 s
[2026-04-01 11:05:19] 2026-04-01 09:04:45,691 | INFO     | . payload execution = 11720 s
[2026-04-01 11:05:19] 2026-04-01 09:04:45,691 | INFO     | . stage-out = 1 s
[2026-04-01 11:05:19] 2026-04-01 09:04:45,691 | INFO     | . log creation = 0 s
[2026-04-01 11:05:19] 2026-04-01 09:04:45,691 | INFO     | ..............................
[2026-04-01 11:05:19] 2026-04-01 09:04:45,906 | INFO     | 
[2026-04-01 11:05:19] 2026-04-01 09:04:45,906 | INFO     | job summary report
[2026-04-01 11:05:19] 2026-04-01 09:04:45,907 | INFO     | --------------------------------------------------
[2026-04-01 11:05:19] 2026-04-01 09:04:45,907 | INFO     | PanDA job id: 7072264218
[2026-04-01 11:05:19] 2026-04-01 09:04:45,907 | INFO     | task id: 49263200
[2026-04-01 11:05:19] 2026-04-01 09:04:45,907 | INFO     | errors: (none)
[2026-04-01 11:05:19] 2026-04-01 09:04:45,907 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 11:05:19] 2026-04-01 09:04:45,907 | INFO     | pilot state: finished 
[2026-04-01 11:05:19] 2026-04-01 09:04:45,907 | INFO     | transexitcode: 0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,907 | INFO     | exeerrorcode: 0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,907 | INFO     | exeerrordiag: 
[2026-04-01 11:05:19] 2026-04-01 09:04:45,907 | INFO     | exitcode: 0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,907 | INFO     | exitmsg: OK
[2026-04-01 11:05:19] 2026-04-01 09:04:45,907 | INFO     | cpuconsumptiontime: 43845 s
[2026-04-01 11:05:19] 2026-04-01 09:04:45,908 | INFO     | nevents: 400
[2026-04-01 11:05:19] 2026-04-01 09:04:45,908 | INFO     | neventsw: 0
[2026-04-01 11:05:19] 2026-04-01 09:04:45,908 | INFO     | pid: 454689
[2026-04-01 11:05:19] 2026-04-01 09:04:45,908 | INFO     | pgrp: 454689
[2026-04-01 11:05:19] 2026-04-01 09:04:45,908 | INFO     | corecount: 4
[2026-04-01 11:05:19] 2026-04-01 09:04:45,908 | INFO     | event service: False
[2026-04-01 11:05:19] 2026-04-01 09:04:45,908 | INFO     | sizes: {0: 2279127, 1: 2281624, 12: 2281624, 11737: 2311250, 11738: 2320270, 11739: 2320326, 11741: 2320648}
[2026-04-01 11:05:19] 2026-04-01 09:04:45,908 | INFO     | --------------------------------------------------
[2026-04-01 11:05:19] 2026-04-01 09:04:45,908 | INFO     | 
[2026-04-01 11:05:19] 2026-04-01 09:04:45,908 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/3
[2026-04-01 11:05:19] 2026-04-01 09:04:45,930 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,931 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,931 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,931 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,931 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,931 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,931 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,931 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,931 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,931 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,931 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,931 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,931 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,932 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,932 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,932 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,932 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,932 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 11:05:19] 2026-04-01 09:04:45,932 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,932 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 11:05:19] 2026-04-01 09:04:45,932 | INFO     | job 7072264218 has completed (purged errors)
[2026-04-01 11:05:19] 2026-04-01 09:04:45,932 | INFO     | overall cleanup function is called
[2026-04-01 11:05:19] 2026-04-01 09:04:46,940 | INFO     | --- collectZombieJob: --- 10, [454689]
[2026-04-01 11:05:19] 2026-04-01 09:04:46,940 | INFO     | zombie collector waiting for pid 454689
[2026-04-01 11:05:19] 2026-04-01 09:04:46,942 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 11:05:19] 2026-04-01 09:04:46,942 | INFO     | collected zombie processes
[2026-04-01 11:05:19] 2026-04-01 09:04:46,942 | INFO     | will attempt to kill all subprocesses of pid=454689
[2026-04-01 11:05:19] 2026-04-01 09:04:47,346 | INFO     | process IDs to be killed: [454689] (in reverse order)
[2026-04-01 11:05:19] 2026-04-01 09:04:47,472 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 11:05:19] 2026-04-01 09:04:47,472 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 11:05:19] 2026-04-01 09:04:47,484 | INFO     | did not find any defunct processes belonging to 454689
[2026-04-01 11:05:19] 2026-04-01 09:04:47,497 | INFO     | did not find any defunct processes belonging to 454689
[2026-04-01 11:05:19] 2026-04-01 09:04:47,497 | INFO     | Ready for new job
[2026-04-01 11:05:19] 2026-04-01 09:04:47,499 | INFO     | **************************************
[2026-04-01 11:05:19] 2026-04-01 09:04:47,499 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-01 11:05:19] 2026-04-01 09:04:47,499 | INFO     | **************************************
[2026-04-01 11:05:19] 2026-04-01 09:04:47,499 | INFO     | 
[2026-04-01 11:05:19] 2026-04-01 09:04:47,503 | INFO     | architecture information:
[2026-04-01 11:05:19] 2026-04-01 09:04:47,504 | INFO     | executing command: cat /etc/os-release
[2026-04-01 11:05:19] 2026-04-01 09:04:47,521 | INFO     | cat /etc/os-release:
[2026-04-01 11:05:19] NAME="CentOS Linux"
[2026-04-01 11:05:19] VERSION="7 (Core)"
[2026-04-01 11:05:19] ID="centos"
[2026-04-01 11:05:19] ID_LIKE="rhel fedora"
[2026-04-01 11:05:19] VERSION_ID="7"
[2026-04-01 11:05:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 11:05:19] ANSI_COLOR="0;31"
[2026-04-01 11:05:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 11:05:19] HOME_URL="https://www.centos.org/"
[2026-04-01 11:05:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 11:05:19] 
[2026-04-01 11:05:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 11:05:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 11:05:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 11:05:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 11:05:19] 
[2026-04-01 11:05:19] 2026-04-01 09:04:47,521 | INFO     | **************************************
[2026-04-01 11:05:19] 2026-04-01 09:04:48,024 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/3
[2026-04-01 11:05:19] 2026-04-01 09:04:48,038 | INFO     | sufficient remaining disk space (37108056064 B)
[2026-04-01 11:05:19] 2026-04-01 09:04:48,039 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 11:05:19] 2026-04-01 09:04:48,039 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 11:05:19] 2026-04-01 09:04:48,039 | INFO     | update_server=False
[2026-04-01 11:05:19] 2026-04-01 09:04:48,039 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-01 11:05:19] 2026-04-01 09:04:48,396 | INFO     | all payload control threads have been joined
[2026-04-01 11:05:19] 2026-04-01 09:04:48,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 11:05:19] 2026-04-01 09:04:48,490 | INFO     | aborting loop
[2026-04-01 11:05:19] 2026-04-01 09:04:48,533 | INFO     | all data control threads have been joined
[2026-04-01 11:05:19] 2026-04-01 09:04:48,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 11:05:19] 2026-04-01 09:04:49,044 | INFO     | [job] retrieve thread has finished
[2026-04-01 11:05:19] 2026-04-01 09:04:49,132 | INFO     | all job control threads have been joined
[2026-04-01 11:05:19] 2026-04-01 09:04:49,291 | INFO     | [payload] validate_post thread has finished
[2026-04-01 11:05:19] 2026-04-01 09:04:49,398 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 11:05:19] 2026-04-01 09:04:49,398 | INFO     | [payload] control thread has finished
[2026-04-01 11:05:19] 2026-04-01 09:04:49,495 | INFO     | [job] job monitor thread has finished
[2026-04-01 11:05:19] 2026-04-01 09:04:49,538 | INFO     | [data] control thread has finished
[2026-04-01 11:05:19] 2026-04-01 09:04:49,575 | INFO     | [data] copytool_in thread has finished
[2026-04-01 11:05:19] 2026-04-01 09:04:50,137 | INFO     | [job] control thread has finished
[2026-04-01 11:05:19] 2026-04-01 09:04:50,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 11:05:19] 2026-04-01 09:04:50,308 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 11:05:19] 2026-04-01 09:04:50,309 | INFO     | [job] validate thread has finished
[2026-04-01 11:05:19] 2026-04-01 09:04:50,325 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 11:05:19] 2026-04-01 09:04:50,442 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 11:05:19] 2026-04-01 09:04:50,470 | INFO     | [payload] failed_post thread has finished
[2026-04-01 11:05:19] 2026-04-01 09:04:50,796 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 11:05:19] 2026-04-01 09:04:50,943 | INFO     | [data] copytool_out thread has finished
[2026-04-01 11:05:19] 2026-04-01 09:04:51,801 | INFO     | [job] queue monitor thread has finished
[2026-04-01 11:05:19] 2026-04-01 09:04:54,293 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 11:05:19] 2026-04-01 09:05:12,788 | INFO     | [monitor] cgroup control has ended
[2026-04-01 11:05:19] 2026-04-01 09:05:14,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22937109391168)>', '<ExcThread(monitor, started 22936873617152)>']
[2026-04-01 11:05:19] 2026-04-01 09:05:17,887 | INFO     | PID=449816 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-01 11:05:19] 2026-04-01 09:05:17,888 | INFO     | .. there are 12 such processes running
[2026-04-01 11:05:19] 2026-04-01 09:05:17,889 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 11:05:19] 2026-04-01 09:05:17,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 11:05:19] 2026-04-01 09:05:17,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 11:05:19] 2026-04-01 09:05:17,890 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 11:05:19] 2026-04-01 09:05:17,890 | INFO     | [monitor] control thread has ended
[2026-04-01 11:05:19] 2026-04-01 09:05:19,348 | INFO     | all workflow threads have been joined
[2026-04-01 11:05:19] 2026-04-01 09:05:19,348 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 11:05:19] 2026-04-01 09:05:19,349 | INFO     | traces error code: 0
[2026-04-01 11:05:19] 2026-04-01 09:05:19,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 11:05:19] 2026-04-01 09:05:19,498 [wrapper] ==== pilot stdout END ====
[2026-04-01 11:05:19] 2026-04-01 09:05:19,501 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 11:05:19] 2026-04-01 09:05:19,503 [wrapper] pilotpid: 449816
[2026-04-01 11:05:19] 2026-04-01 09:05:19,506 [wrapper] Pilot exit status: 0
[2026-04-01 11:05:19] 2026-04-01 09:05:19,515 [wrapper] pandaids: 7072264218
[2026-04-01 11:05:19] 2026-04-01 09:05:19,594 [wrapper] cleanup supervisor_pilot  662675 449817
[2026-04-01 11:05:19] 2026-04-01 09:05:19,597 [wrapper] Test setup, not cleaning
[2026-04-01 11:05:19] 2026-04-01 09:05:19,600 [wrapper] apfmon messages muted
[2026-04-01 11:05:19] 2026-04-01 09:05:19,603 [wrapper] ==== wrapper stdout END ====
[2026-04-01 11:05:19] 2026-04-01 09:05:19,605 [wrapper] ==== wrapper stderr END ====
[2026-04-01 11:05:19]  *** Error codes and diagnostics ***
[2026-04-01 11:05:19]     "exeErrorCode": 0,
[2026-04-01 11:05:19]     "pilotErrorCode": 0,
[2026-04-01 11:05:19]  *** Listing of results directory ***
[2026-04-01 11:05:19] total 411788
[2026-04-01 11:05:19] -rw-r--r--. 1 boinc boinc    644034 Mar 30 21:08 pilot3.tar.gz
[2026-04-01 11:05:19] -rwx------. 1 boinc boinc     36322 Mar 30 21:08 runpilot2-wrapper.sh
[2026-04-01 11:05:19] -rw-r--r--. 1 boinc boinc      5118 Mar 30 21:08 queuedata.json
[2026-04-01 11:05:19] -rw-r--r--. 1 boinc boinc       100 Apr  1 07:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 11:05:19] -rwxr-xr-x. 1 boinc boinc      7986 Apr  1 07:48 run_atlas
[2026-04-01 11:05:19] -rw-r--r--. 1 boinc boinc       105 Apr  1 07:48 job.xml
[2026-04-01 11:05:19] -rw-r--r--. 1 boinc boinc      6564 Apr  1 07:48 init_data.xml
[2026-04-01 11:05:19] -rw-r--r--. 2 boinc boinc 224673273 Apr  1 07:48 EVNT.49263198._000389.pool.root.1
[2026-04-01 11:05:19] -rw-r--r--. 2 boinc boinc     15845 Apr  1 07:48 start_atlas.sh
[2026-04-01 11:05:19] drwxrwx--x. 2 boinc boinc      4096 Apr  1 07:48 shared
[2026-04-01 11:05:19] -rw-r--r--. 2 boinc boinc    656756 Apr  1 07:48 input.tar.gz
[2026-04-01 11:05:19] -rw-r--r--. 1 boinc boinc         0 Apr  1 07:48 boinc_lockfile
[2026-04-01 11:05:19] -rw-r--r--. 1 boinc boinc      2572 Apr  1 07:48 pandaJob.out
[2026-04-01 11:05:19] -rw-------. 1 boinc boinc   1004639 Apr  1 07:48 agis_schedconf.cvmfs.json
[2026-04-01 11:05:19] -rw-------. 1 boinc boinc       452 Apr  1 07:48 workernode_map.json
[2026-04-01 11:05:19] drwx------. 5 boinc boinc      4096 Apr  1 07:48 pilot3
[2026-04-01 11:05:19] -rw-------. 1 boinc boinc 190135618 Apr  1 11:04 HITS.49263200._009703.pool.root.1
[2026-04-01 11:05:19] -rw-r--r--. 1 boinc boinc       530 Apr  1 11:04 boinc_task_state.xml
[2026-04-01 11:05:19] -rw-------. 1 boinc boinc      1033 Apr  1 11:04 memory_monitor_summary.json
[2026-04-01 11:05:19] -rw-------. 1 boinc boinc   1511579 Apr  1 11:04 agis_ddmendpoints.agis.ALL.json
[2026-04-01 11:05:19] -rw-------. 1 boinc boinc    300179 Apr  1 11:04 log.49263200._009703.job.log.tgz.1
[2026-04-01 11:05:19] -rw-------. 1 boinc boinc      6423 Apr  1 11:04 heartbeat_new.json
[2026-04-01 11:05:19] -rw-------. 1 boinc boinc      6314 Apr  1 11:04 heartbeat.json
[2026-04-01 11:05:19] -rw-r--r--. 1 boinc boinc      8192 Apr  1 11:05 boinc_mmap_file
[2026-04-01 11:05:19] -rw-r--r--. 1 boinc boinc        28 Apr  1 11:05 wrapper_checkpoint.txt
[2026-04-01 11:05:19] -rw-------. 1 boinc boinc        95 Apr  1 11:05 pilot_heartbeat.json
[2026-04-01 11:05:19] -rw-------. 1 boinc boinc      4827 Apr  1 11:05 pilotlog.txt
[2026-04-01 11:05:19] -rw-------. 1 boinc boinc   1099197 Apr  1 11:05 log.49263200._009703.job.log.1
[2026-04-01 11:05:19] -rw-------. 1 boinc boinc       357 Apr  1 11:05 output.list
[2026-04-01 11:05:19] -rw-r--r--. 1 boinc boinc       620 Apr  1 11:05 runtime_log
[2026-04-01 11:05:19] -rw-------. 1 boinc boinc   1413120 Apr  1 11:05 result.tar.gz
[2026-04-01 11:05:19] -rw-r--r--. 1 boinc boinc      9205 Apr  1 11:05 runtime_log.err
[2026-04-01 11:05:19] -rw-------. 1 boinc boinc       665 Apr  1 11:05 N3yKDmW9WR9n9Rq4apOajLDm4fhM0noT9bVoINGKDm3ZQKDmxlsuhn.diag
[2026-04-01 11:05:19] -rw-r--r--. 1 boinc boinc     20822 Apr  1 11:05 stderr.txt
[2026-04-01 11:05:19] HITS file was successfully produced:
[2026-04-01 11:05:19] -rw-------. 1 boinc boinc 190135618 Apr  1 11:04 shared/HITS.pool.root.1
[2026-04-01 11:05:19]  *** Contents of shared directory: ***
[2026-04-01 11:05:19] total 407136
[2026-04-01 11:05:19] -rw-r--r--. 2 boinc boinc 224673273 Apr  1 07:48 ATLAS.root_0
[2026-04-01 11:05:19] -rw-r--r--. 2 boinc boinc     15845 Apr  1 07:48 start_atlas.sh
[2026-04-01 11:05:19] -rw-r--r--. 2 boinc boinc    656756 Apr  1 07:48 input.tar.gz
[2026-04-01 11:05:19] -rw-------. 1 boinc boinc 190135618 Apr  1 11:04 HITS.pool.root.1
[2026-04-01 11:05:19] -rw-------. 1 boinc boinc   1413120 Apr  1 11:05 result.tar.gz
11:05:20 (445706): run_atlas exited; CPU time 44359.603465
11:05:20 (445706): called boinc_finish(0)

</stderr_txt>
]]>

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