Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:36:15 (32468): wrapper (7.7.26015): starting
16:36:15 (32468): wrapper: running run_atlas (--nthreads 12)
[2026-03-30 16:36:15] Arguments: --nthreads 12
[2026-03-30 16:36:15] Threads: 12
[2026-03-30 16:36:15] Checking for CVMFS
[2026-03-30 16:36:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 16:36:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 16:36:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 16:36:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 16:36:15] 2.11.2.0 2937 466730 96768 157895 3 52 16267042 20275201 1 130560 1 200478714 99.954 26799781 17566 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-30 16:36:15] CVMFS is ok
[2026-03-30 16:36:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 16:36:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 16:36:15] Further information can be found at the LHC@home message board.
[2026-03-30 16:36:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 16:36:15] Checking for apptainer binary...
[2026-03-30 16:36:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 16:36:15] Running /usr/bin/apptainer --version
[2026-03-30 16:36:15] apptainer version 1.3.2-1.el7
[2026-03-30 16:36:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 16:36:16] c-205-8.aglt2.org
[2026-03-30 16:36:16] apptainer works
[2026-03-30 16:36:16] Set ATHENA_PROC_NUMBER=12
[2026-03-30 16:36:16] Set ATHENA_CORE_NUMBER=12
[2026-03-30 16:36:16] Starting ATLAS job with PandaID=7074413825
[2026-03-30 16:36:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-30 17:57:50]  *** The last 200 lines of the pilot log: ***
[2026-03-30 17:57:50]  ddm_activity=['write_lan', 'write_wan']
[2026-03-30 17:57:50]  ddmendpoint=NDGF-T1_DATADISK
[2026-03-30 17:57:50]  ddmendpoint_alt=None
[2026-03-30 17:57:50]  direct_access_lan=False
[2026-03-30 17:57:50]  direct_access_wan=False
[2026-03-30 17:57:50]  domain=
[2026-03-30 17:57:50]  filesize=359133
[2026-03-30 17:57:50]  filetype=log
[2026-03-30 17:57:50]  guid=016563c1-afbb-43be-be5c-c7de48fd9b84
[2026-03-30 17:57:50]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-30 17:57:50]  is_altstaged=None
[2026-03-30 17:57:50]  is_tar=False
[2026-03-30 17:57:50]  lfn=log.49499734._000181.job.log.tgz.1
[2026-03-30 17:57:50]  mtime=0
[2026-03-30 17:57:50]  protocol_id=None
[2026-03-30 17:57:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-30 17:57:50]  replicas=None
[2026-03-30 17:57:50]  scope=mc23_13p6TeV
[2026-03-30 17:57:50]  status=None
[2026-03-30 17:57:50]  status_code=0
[2026-03-30 17:57:50]  storage_token=
[2026-03-30 17:57:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7074413825/log.49499734._000181.job.log.tgz.1
[2026-03-30 17:57:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/ac/log.49499734._000181.job.log.tgz.1
[2026-03-30 17:57:50]  workdir=None
[2026-03-30 17:57:50] ]
[2026-03-30 17:57:50] 2026-03-30 21:57:04,652 | INFO     | transferring file log.49499734._000181.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7074413825/log.49499734._000181.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-30 17:57:50] 2026-03-30 21:57:04,652 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7074413825/log.49499734._000181.job.log.tgz.1 /tmp/boinchome/slots/0/log.49499734._000181.job
[2026-03-30 17:57:50] 2026-03-30 21:57:04,675 | INFO     | adding to output.list: log.49499734._000181.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/ac/log.49499734._000181.job.log.tg
[2026-03-30 17:57:50] 2026-03-30 21:57:04,676 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-30 17:57:50] 2026-03-30 21:57:04,676 | INFO     | summary of transferred files:
[2026-03-30 17:57:50] 2026-03-30 21:57:04,676 | INFO     |  -- lfn=log.49499734._000181.job.log.tgz.1, status_code=0, status=transferred
[2026-03-30 17:57:50] 2026-03-30 21:57:04,677 | INFO     | stage-out finished correctly
[2026-03-30 17:57:50] 2026-03-30 21:57:05,472 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-30 17:57:50] 2026-03-30 21:57:05,549 | INFO     | job 7074413825 has state=finished
[2026-03-30 17:57:50] 2026-03-30 21:57:05,549 | INFO     | preparing for final server update for job 7074413825 in state='finished'
[2026-03-30 17:57:50] 2026-03-30 21:57:05,549 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7074413825/jobReport.json
[2026-03-30 17:57:50] 2026-03-30 21:57:05,551 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-30 17:57:50] 2026-03-30 21:57:05,551 | INFO     | this job has now completed (state=finished)
[2026-03-30 17:57:50] 2026-03-30 21:57:05,551 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-30 17:57:50] 2026-03-30 21:57:05,551 | INFO     | log transfer has been attempted: DONE
[2026-03-30 17:57:50] 2026-03-30 21:57:05,551 | INFO     | job 7074413825 has finished - writing final server update
[2026-03-30 17:57:50] 2026-03-30 21:57:05,552 | INFO     | total number of processed events: 400 (read)
[2026-03-30 17:57:50] 2026-03-30 21:57:05,553 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7074413825/memory_monitor_summary.json (trf name=prmon)
[2026-03-30 17:57:50] 2026-03-30 21:57:05,554 | INFO     | extracted standard info from prmon json
[2026-03-30 17:57:50] 2026-03-30 21:57:05,554 | INFO     | extracted standard memory fields from prmon json
[2026-03-30 17:57:50] 2026-03-30 21:57:05,554 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-30 17:57:50] 2026-03-30 21:57:05,554 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-30 17:57:50] 2026-03-30 21:57:05,556 | INFO     | fitting pss+swap vs Time
[2026-03-30 17:57:50] 2026-03-30 21:57:05,556 | INFO     | sum of square deviations: 115715658.0
[2026-03-30 17:57:50] 2026-03-30 21:57:05,556 | INFO     | sum of deviations: -8570391297.999999
[2026-03-30 17:57:50] 2026-03-30 21:57:05,556 | INFO     | mean x (centered): 0.0
[2026-03-30 17:57:50] 2026-03-30 21:57:05,557 | INFO     | mean y: 2838501.388888889
[2026-03-30 17:57:50] 2026-03-30 21:57:05,557 | INFO     | intersect: 2838501.388888889
[2026-03-30 17:57:50] 2026-03-30 21:57:05,557 | INFO     | chi2: 0.10549379834489256
[2026-03-30 17:57:50] 2026-03-30 21:57:05,557 | INFO     | current memory leak: -74.06 B/s (using 72 data points, chi2=0.11)
[2026-03-30 17:57:50] 2026-03-30 21:57:05,557 | INFO     | could have reported an average CPU frequency of 1795 MHz (6 samples)
[2026-03-30 17:57:50] 2026-03-30 21:57:05,557 | INFO     | ..............................
[2026-03-30 17:57:50] 2026-03-30 21:57:05,558 | INFO     | . Timing measurements:
[2026-03-30 17:57:50] 2026-03-30 21:57:05,558 | INFO     | . get job = 0 s
[2026-03-30 17:57:50] 2026-03-30 21:57:05,558 | INFO     | . initial setup = 7 s
[2026-03-30 17:57:50] 2026-03-30 21:57:05,558 | INFO     | . payload setup = 14 s
[2026-03-30 17:57:50] 2026-03-30 21:57:05,558 | INFO     | . stage-in = 0 s
[2026-03-30 17:57:50] 2026-03-30 21:57:05,558 | INFO     | . payload execution = 4796 s
[2026-03-30 17:57:50] 2026-03-30 21:57:05,558 | INFO     | . stage-out = 0 s
[2026-03-30 17:57:50] 2026-03-30 21:57:05,558 | INFO     | . log creation = 0 s
[2026-03-30 17:57:50] 2026-03-30 21:57:05,558 | INFO     | ..............................
[2026-03-30 17:57:50] 2026-03-30 21:57:05,634 | INFO     | 
[2026-03-30 17:57:50] 2026-03-30 21:57:05,634 | INFO     | job summary report
[2026-03-30 17:57:50] 2026-03-30 21:57:05,634 | INFO     | --------------------------------------------------
[2026-03-30 17:57:50] 2026-03-30 21:57:05,635 | INFO     | PanDA job id: 7074413825
[2026-03-30 17:57:50] 2026-03-30 21:57:05,635 | INFO     | task id: 49499734
[2026-03-30 17:57:50] 2026-03-30 21:57:05,635 | INFO     | errors: (none)
[2026-03-30 17:57:50] 2026-03-30 21:57:05,635 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-30 17:57:50] 2026-03-30 21:57:05,635 | INFO     | pilot state: finished 
[2026-03-30 17:57:50] 2026-03-30 21:57:05,635 | INFO     | transexitcode: 0
[2026-03-30 17:57:50] 2026-03-30 21:57:05,635 | INFO     | exeerrorcode: 0
[2026-03-30 17:57:50] 2026-03-30 21:57:05,635 | INFO     | exeerrordiag: 
[2026-03-30 17:57:50] 2026-03-30 21:57:05,635 | INFO     | exitcode: 0
[2026-03-30 17:57:50] 2026-03-30 21:57:05,635 | INFO     | exitmsg: OK
[2026-03-30 17:57:50] 2026-03-30 21:57:05,636 | INFO     | cpuconsumptiontime: 51925 s
[2026-03-30 17:57:50] 2026-03-30 21:57:05,636 | INFO     | nevents: 400
[2026-03-30 17:57:50] 2026-03-30 21:57:05,636 | INFO     | neventsw: 0
[2026-03-30 17:57:50] 2026-03-30 21:57:05,636 | INFO     | pid: 8315
[2026-03-30 17:57:50] 2026-03-30 21:57:05,636 | INFO     | pgrp: 8315
[2026-03-30 17:57:50] 2026-03-30 21:57:05,636 | INFO     | corecount: 12
[2026-03-30 17:57:50] 2026-03-30 21:57:05,636 | INFO     | event service: False
[2026-03-30 17:57:50] 2026-03-30 21:57:05,636 | INFO     | sizes: {0: 2280030, 1: 2281604, 11: 2281632, 4814: 2307901, 4816: 2316927, 4817: 2317305}
[2026-03-30 17:57:50] 2026-03-30 21:57:05,636 | INFO     | --------------------------------------------------
[2026-03-30 17:57:50] 2026-03-30 21:57:05,636 | INFO     | 
[2026-03-30 17:57:50] 2026-03-30 21:57:05,637 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-30 17:57:50] 2026-03-30 21:57:05,660 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,660 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,660 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,660 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,661 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,661 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,661 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,661 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,661 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,661 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,661 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,661 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,661 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,662 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,662 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,662 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,662 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,662 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-30 17:57:50] 2026-03-30 21:57:05,662 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,662 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-30 17:57:50] 2026-03-30 21:57:05,662 | INFO     | job 7074413825 has completed (purged errors)
[2026-03-30 17:57:50] 2026-03-30 21:57:05,663 | INFO     | overall cleanup function is called
[2026-03-30 17:57:50] 2026-03-30 21:57:06,670 | INFO     | --- collectZombieJob: --- 10, [8315]
[2026-03-30 17:57:50] 2026-03-30 21:57:06,670 | INFO     | zombie collector waiting for pid 8315
[2026-03-30 17:57:50] 2026-03-30 21:57:06,670 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-30 17:57:50] 2026-03-30 21:57:06,670 | INFO     | collected zombie processes
[2026-03-30 17:57:50] 2026-03-30 21:57:06,671 | INFO     | will attempt to kill all subprocesses of pid=8315
[2026-03-30 17:57:50] 2026-03-30 21:57:06,763 | INFO     | process IDs to be killed: [8315] (in reverse order)
[2026-03-30 17:57:50] 2026-03-30 21:57:06,813 | WARNING  | found no corresponding commands to process id(s)
[2026-03-30 17:57:50] 2026-03-30 21:57:06,814 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-30 17:57:50] 2026-03-30 21:57:06,817 | INFO     | did not find any defunct processes belonging to 8315
[2026-03-30 17:57:50] 2026-03-30 21:57:06,820 | INFO     | did not find any defunct processes belonging to 8315
[2026-03-30 17:57:50] 2026-03-30 21:57:06,820 | INFO     | Ready for new job
[2026-03-30 17:57:50] 2026-03-30 21:57:06,821 | INFO     | **************************************
[2026-03-30 17:57:50] 2026-03-30 21:57:06,822 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-30 17:57:50] 2026-03-30 21:57:06,822 | INFO     | **************************************
[2026-03-30 17:57:50] 2026-03-30 21:57:06,822 | INFO     | 
[2026-03-30 17:57:50] 2026-03-30 21:57:06,822 | INFO     | architecture information:
[2026-03-30 17:57:50] 2026-03-30 21:57:06,823 | INFO     | executing command: cat /etc/os-release
[2026-03-30 17:57:50] 2026-03-30 21:57:06,837 | INFO     | cat /etc/os-release:
[2026-03-30 17:57:50] NAME="CentOS Linux"
[2026-03-30 17:57:50] VERSION="7 (Core)"
[2026-03-30 17:57:50] ID="centos"
[2026-03-30 17:57:50] ID_LIKE="rhel fedora"
[2026-03-30 17:57:50] VERSION_ID="7"
[2026-03-30 17:57:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-30 17:57:50] ANSI_COLOR="0;31"
[2026-03-30 17:57:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-30 17:57:50] HOME_URL="https://www.centos.org/"
[2026-03-30 17:57:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-30 17:57:50] 
[2026-03-30 17:57:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-30 17:57:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-30 17:57:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-30 17:57:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-30 17:57:50] 
[2026-03-30 17:57:50] 2026-03-30 21:57:06,838 | INFO     | **************************************
[2026-03-30 17:57:50] 2026-03-30 21:57:07,341 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-30 17:57:50] 2026-03-30 21:57:07,356 | INFO     | sufficient remaining disk space (29250027520 B)
[2026-03-30 17:57:50] 2026-03-30 21:57:07,357 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-30 17:57:50] 2026-03-30 21:57:07,357 | INFO     | current server update state: UPDATING_FINAL
[2026-03-30 17:57:50] 2026-03-30 21:57:07,357 | INFO     | update_server=False
[2026-03-30 17:57:50] 2026-03-30 21:57:07,357 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-30 17:57:50] 2026-03-30 21:57:07,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-30 17:57:50] 2026-03-30 21:57:07,358 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-30 17:57:50] 2026-03-30 21:57:07,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-30 17:57:50] 2026-03-30 21:57:07,358 | INFO     | aborting loop
[2026-03-30 17:57:50] 2026-03-30 21:57:07,538 | INFO     | all data control threads have been joined
[2026-03-30 17:57:50] 2026-03-30 21:57:07,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-30 17:57:50] 2026-03-30 21:57:07,775 | INFO     | all payload control threads have been joined
[2026-03-30 17:57:50] 2026-03-30 21:57:08,017 | INFO     | all job control threads have been joined
[2026-03-30 17:57:50] 2026-03-30 21:57:08,360 | INFO     | [job] retrieve thread has finished
[2026-03-30 17:57:50] 2026-03-30 21:57:08,363 | INFO     | [job] queue monitor thread has finished
[2026-03-30 17:57:50] 2026-03-30 21:57:08,364 | INFO     | [job] job monitor thread has finished
[2026-03-30 17:57:50] 2026-03-30 21:57:08,543 | INFO     | [data] control thread has finished
[2026-03-30 17:57:50] 2026-03-30 21:57:08,598 | INFO     | [payload] execute_payloads thread has finished
[2026-03-30 17:57:50] 2026-03-30 21:57:08,781 | INFO     | [payload] control thread has finished
[2026-03-30 17:57:50] 2026-03-30 21:57:08,847 | INFO     | [job] validate thread has finished
[2026-03-30 17:57:50] 2026-03-30 21:57:08,968 | INFO     | [payload] validate_post thread has finished
[2026-03-30 17:57:50] 2026-03-30 21:57:09,023 | INFO     | [job] control thread has finished
[2026-03-30 17:57:50] 2026-03-30 21:57:09,212 | INFO     | [job] create_data_payload thread has finished
[2026-03-30 17:57:50] 2026-03-30 21:57:09,447 | INFO     | [payload] validate_pre thread has finished
[2026-03-30 17:57:50] 2026-03-30 21:57:09,448 | INFO     | [data] copytool_in thread has finished
[2026-03-30 17:57:50] 2026-03-30 21:57:09,637 | INFO     | [payload] failed_post thread has finished
[2026-03-30 17:57:50] 2026-03-30 21:57:09,768 | INFO     | [data] copytool_out thread has finished
[2026-03-30 17:57:50] 2026-03-30 21:57:11,364 | INFO     | [data] queue_monitor thread has finished
[2026-03-30 17:57:50] 2026-03-30 21:57:18,246 | INFO     | job.realtimelogging is not enabled
[2026-03-30 17:57:50] 2026-03-30 21:57:19,252 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-30 17:57:50] 2026-03-30 21:57:37,396 | INFO     | PID=3884 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-30 17:57:50] 2026-03-30 21:57:37,397 | INFO     | found 0 job(s) in 20 queues
[2026-03-30 17:57:50] 2026-03-30 21:57:37,397 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-30 17:57:50] 2026-03-30 21:57:37,397 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-30 17:57:50] 2026-03-30 21:57:44,635 | INFO     | [monitor] cgroup control has ended
[2026-03-30 17:57:50] 2026-03-30 21:57:45,118 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139684850902848)>', '<ExcThread(monitor, started 139684114052864)>']
[2026-03-30 17:57:50] 2026-03-30 21:57:45,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-30 17:57:50] 2026-03-30 21:57:45,438 | INFO     | [monitor] control thread has ended
[2026-03-30 17:57:50] 2026-03-30 21:57:50,144 | INFO     | all workflow threads have been joined
[2026-03-30 17:57:50] 2026-03-30 21:57:50,153 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-30 17:57:50] 2026-03-30 21:57:50,153 | INFO     | traces error code: 0
[2026-03-30 17:57:50] 2026-03-30 21:57:50,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-30 17:57:50] 2026-03-30 21:57:50,235 [wrapper] ==== pilot stdout END ====
[2026-03-30 17:57:50] 2026-03-30 21:57:50,238 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-30 17:57:50] 2026-03-30 21:57:50,241 [wrapper] pilotpid: 3884
[2026-03-30 17:57:50] 2026-03-30 21:57:50,244 [wrapper] Pilot exit status: 0
[2026-03-30 17:57:50] 2026-03-30 21:57:50,259 [wrapper] pandaids: 7074413825
[2026-03-30 17:57:50] 2026-03-30 21:57:50,292 [wrapper] cleanup supervisor_pilot 30505 3885
[2026-03-30 17:57:50] 2026-03-30 21:57:50,296 [wrapper] Test setup, not cleaning
[2026-03-30 17:57:50] 2026-03-30 21:57:50,300 [wrapper] apfmon messages muted
[2026-03-30 17:57:50] 2026-03-30 21:57:50,304 [wrapper] ==== wrapper stdout END ====
[2026-03-30 17:57:50] 2026-03-30 21:57:50,307 [wrapper] ==== wrapper stderr END ====
[2026-03-30 17:57:50]  *** Error codes and diagnostics ***
[2026-03-30 17:57:50]     "exeErrorCode": 0,
[2026-03-30 17:57:50]     "pilotErrorCode": 0,
[2026-03-30 17:57:50]  *** Listing of results directory ***
[2026-03-30 17:57:50] total 445116
[2026-03-30 17:57:50] -rw-r--r-- 1 boincer umatlas    644034 Mar 30 13:48 pilot3.tar.gz
[2026-03-30 17:57:50] -rw-r--r-- 1 boincer umatlas      5118 Mar 30 13:50 queuedata.json
[2026-03-30 17:57:50] -rwx------ 1 boincer umatlas     36322 Mar 30 13:51 runpilot2-wrapper.sh
[2026-03-30 17:57:50] -rw-r--r-- 1 boincer umatlas       100 Mar 30 16:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-30 17:57:50] -rwxr-xr-x 1 boincer umatlas      7986 Mar 30 16:36 run_atlas
[2026-03-30 17:57:50] -rw-r--r-- 1 boincer umatlas       105 Mar 30 16:36 job.xml
[2026-03-30 17:57:50] -rw-r--r-- 2 boincer umatlas 263516988 Mar 30 16:36 EVNT.49474588._000008.pool.root.1
[2026-03-30 17:57:50] -rw-r--r-- 2 boincer umatlas     15845 Mar 30 16:36 start_atlas.sh
[2026-03-30 17:57:50] drwxrwx--x 2 boincer umatlas      4096 Mar 30 16:36 shared
[2026-03-30 17:57:50] -rw-r--r-- 2 boincer umatlas    656752 Mar 30 16:36 input.tar.gz
[2026-03-30 17:57:50] -rw-r--r-- 1 boincer umatlas         0 Mar 30 16:36 boinc_lockfile
[2026-03-30 17:57:50] -rw-r--r-- 1 boincer umatlas      2586 Mar 30 16:36 pandaJob.out
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas        57 Mar 30 16:36 setup.sh.local
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas   1004000 Mar 30 16:36 agis_schedconf.cvmfs.json
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas   1511579 Mar 30 16:36 agis_ddmendpoints.agis.ALL.json
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas       444 Mar 30 16:36 workernode_map.json
[2026-03-30 17:57:50] drwx------ 5 boincer umatlas      4096 Mar 30 16:36 pilot3
[2026-03-30 17:57:50] -rw-r--r-- 1 boincer umatlas      5952 Mar 30 17:47 init_data.xml
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas 186567957 Mar 30 17:56 HITS.49499734._000181.pool.root.1
[2026-03-30 17:57:50] -rw-r--r-- 1 boincer umatlas       529 Mar 30 17:56 boinc_task_state.xml
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas      1057 Mar 30 17:57 memory_monitor_summary.json
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas    359133 Mar 30 17:57 log.49499734._000181.job.log.tgz.1
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas      6443 Mar 30 17:57 heartbeat_new.json
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas      6334 Mar 30 17:57 heartbeat.json
[2026-03-30 17:57:50] -rw-r--r-- 1 boincer umatlas        27 Mar 30 17:57 wrapper_checkpoint.txt
[2026-03-30 17:57:50] -rw-r--r-- 1 boincer umatlas      8192 Mar 30 17:57 boinc_mmap_file
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas        95 Mar 30 17:57 pilot_heartbeat.json
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas      4812 Mar 30 17:57 pilotlog.txt
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas    466544 Mar 30 17:57 log.49499734._000181.job.log.1
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas       357 Mar 30 17:57 output.list
[2026-03-30 17:57:50] -rw-r--r-- 1 boincer umatlas       620 Mar 30 17:57 runtime_log
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas    839680 Mar 30 17:57 result.tar.gz
[2026-03-30 17:57:50] -rw-r--r-- 1 boincer umatlas      9338 Mar 30 17:57 runtime_log.err
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas       659 Mar 30 17:57 iLvKDmBxVR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmPSOKDmMaENFo.diag
[2026-03-30 17:57:50] -rw-r--r-- 1 boincer umatlas     20646 Mar 30 17:57 stderr.txt
[2026-03-30 17:57:50] HITS file was successfully produced:
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas 186567957 Mar 30 17:56 shared/HITS.pool.root.1
[2026-03-30 17:57:50]  *** Contents of shared directory: ***
[2026-03-30 17:57:50] total 441024
[2026-03-30 17:57:50] -rw-r--r-- 2 boincer umatlas 263516988 Mar 30 16:36 ATLAS.root_0
[2026-03-30 17:57:50] -rw-r--r-- 2 boincer umatlas     15845 Mar 30 16:36 start_atlas.sh
[2026-03-30 17:57:50] -rw-r--r-- 2 boincer umatlas    656752 Mar 30 16:36 input.tar.gz
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas 186567957 Mar 30 17:56 HITS.pool.root.1
[2026-03-30 17:57:50] -rw------- 1 boincer umatlas    839680 Mar 30 17:57 result.tar.gz
17:57:52 (32468): run_atlas exited; CPU time 51752.931675
17:57:52 (32468): called boinc_finish(0)

</stderr_txt>
]]>

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