Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:16:19 (1929973): wrapper (7.7.26015): starting
08:16:19 (1929973): wrapper: running run_atlas (--nthreads 2)
[2026-03-31 08:16:19] Arguments: --nthreads 2
[2026-03-31 08:16:19] Threads: 2
[2026-03-31 08:16:19] Checking for CVMFS
[2026-03-31 08:16:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 08:16:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 08:16:20] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 08:16:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 08:16:20] 2.9.2.0 1552346 4196 55860 157911 1 49 30423160 36864000 0 130560 0 1441207 99.979 163172 15334 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-31 08:16:20] CVMFS is ok
[2026-03-31 08:16:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 08:16:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 08:16:20] Further information can be found at the LHC@home message board.
[2026-03-31 08:16:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 08:16:20] Checking for apptainer binary...
[2026-03-31 08:16:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 08:16:20] Running /usr/bin/apptainer --version
[2026-03-31 08:16:20] apptainer version 1.4.1-1.1
[2026-03-31 08:16:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 08:16:20] thA337
[2026-03-31 08:16:20] apptainer works
[2026-03-31 08:16:20] Set ATHENA_PROC_NUMBER=2
[2026-03-31 08:16:20] Set ATHENA_CORE_NUMBER=2
[2026-03-31 08:16:20] Starting ATLAS job with PandaID=7072263870
[2026-03-31 08:16:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 10:21:59]  *** The last 200 lines of the pilot log: ***
[2026-03-31 10:21:59] 2026-03-31 08:21:27,706 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 10:21:59] 2026-03-31 08:21:27,706 | INFO     | did not find any defunct processes belonging to 1938413
[2026-03-31 10:21:59] 2026-03-31 08:21:27,707 | INFO     | did not find any defunct processes belonging to 1938413
[2026-03-31 10:21:59] 2026-03-31 08:21:27,707 | INFO     | Ready for new job
[2026-03-31 10:21:59] 2026-03-31 08:21:27,708 | INFO     | **************************************
[2026-03-31 10:21:59] 2026-03-31 08:21:27,708 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 10:21:59] 2026-03-31 08:21:27,708 | INFO     | **************************************
[2026-03-31 10:21:59] 2026-03-31 08:21:27,708 | INFO     | 
[2026-03-31 10:21:59] 2026-03-31 08:21:27,708 | INFO     | architecture information:
[2026-03-31 10:21:59] 2026-03-31 08:21:27,708 | INFO     | executing command: cat /etc/os-release
[2026-03-31 10:21:59] 2026-03-31 08:21:27,717 | INFO     | cat /etc/os-release:
[2026-03-31 10:21:59] NAME="CentOS Linux"
[2026-03-31 10:21:59] VERSION="7 (Core)"
[2026-03-31 10:21:59] ID="centos"
[2026-03-31 10:21:59] ID_LIKE="rhel fedora"
[2026-03-31 10:21:59] VERSION_ID="7"
[2026-03-31 10:21:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 10:21:59] ANSI_COLOR="0;31"
[2026-03-31 10:21:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 10:21:59] HOME_URL="https://www.centos.org/"
[2026-03-31 10:21:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 10:21:59] 
[2026-03-31 10:21:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 10:21:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 10:21:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 10:21:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 10:21:59] 
[2026-03-31 10:21:59] 2026-03-31 08:21:27,717 | INFO     | **************************************
[2026-03-31 10:21:59] 2026-03-31 08:21:28,219 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-31 10:21:59] 2026-03-31 08:21:28,232 | INFO     | sufficient remaining disk space (480580206592 B)
[2026-03-31 10:21:59] 2026-03-31 08:21:28,232 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 10:21:59] 2026-03-31 08:21:28,232 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 10:21:59] 2026-03-31 08:21:28,232 | INFO     | update_server=False
[2026-03-31 10:21:59] 2026-03-31 08:21:28,232 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 10:21:59] 2026-03-31 08:21:28,232 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 10:21:59] 2026-03-31 08:21:28,232 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 10:21:59] 2026-03-31 08:21:28,443 | INFO     | all data control threads have been joined
[2026-03-31 10:21:59] 2026-03-31 08:21:29,153 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 10:21:59] 2026-03-31 08:21:29,154 | INFO     | aborting loop
[2026-03-31 10:21:59] 2026-03-31 08:21:29,238 | INFO     | [job] retrieve thread has finished
[2026-03-31 10:21:59] 2026-03-31 08:21:29,238 | INFO     | [job] queue monitor thread has finished
[2026-03-31 10:21:59] 2026-03-31 08:21:29,312 | INFO     | [data] copytool_in thread has finished
[2026-03-31 10:21:59] 2026-03-31 08:21:29,317 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 10:21:59] 2026-03-31 08:21:29,449 | INFO     | [data] control thread has finished
[2026-03-31 10:21:59] 2026-03-31 08:21:29,481 | INFO     | all payload control threads have been joined
[2026-03-31 10:21:59] 2026-03-31 08:21:29,525 | INFO     | all job control threads have been joined
[2026-03-31 10:21:59] 2026-03-31 08:21:29,549 | INFO     | [payload] failed_post thread has finished
[2026-03-31 10:21:59] 2026-03-31 08:21:29,564 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 10:21:59] 2026-03-31 08:21:29,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 10:21:59] 2026-03-31 08:21:30,099 | INFO     | [payload] validate_post thread has finished
[2026-03-31 10:21:59] 2026-03-31 08:21:30,159 | INFO     | [job] job monitor thread has finished
[2026-03-31 10:21:59] 2026-03-31 08:21:30,238 | INFO     | [data] copytool_out thread has finished
[2026-03-31 10:21:59] 2026-03-31 08:21:30,487 | INFO     | [payload] control thread has finished
[2026-03-31 10:21:59] 2026-03-31 08:21:30,531 | INFO     | [job] control thread has finished
[2026-03-31 10:21:59] 2026-03-31 08:21:30,534 | INFO     | [job] validate thread has finished
[2026-03-31 10:21:59] 2026-03-31 08:21:30,681 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 10:21:59] 2026-03-31 08:21:33,869 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 10:21:59] 2026-03-31 08:21:38,617 | INFO     | job.realtimelogging is not enabled
[2026-03-31 10:21:59] 2026-03-31 08:21:39,623 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 10:21:59] 2026-03-31 08:21:52,134 | INFO     | [monitor] cgroup control has ended
[2026-03-31 10:21:59] 2026-03-31 08:21:53,586 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140038955751232)>', '<ExcThread(monitor, started 140038306244352)>']
[2026-03-31 10:21:59] 2026-03-31 08:21:58,612 | INFO     | all workflow threads have been joined
[2026-03-31 10:21:59] 2026-03-31 08:21:58,612 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 10:21:59] 2026-03-31 08:21:58,613 | INFO     | traces error code: 0
[2026-03-31 10:21:59] 2026-03-31 08:21:58,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 10:21:59] 2026-03-31 08:21:59,275 | INFO     | PID=1933998 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-31 10:21:59] 2026-03-31 08:21:59,275 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 10:21:59] 2026-03-31 08:21:59,275 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 10:21:59] 2026-03-31 08:21:59,275 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 10:21:59] 2026-03-31 08:21:59,275 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 10:21:59] 2026-03-31 08:21:59,275 | INFO     | [monitor] control thread has ended
[2026-03-31 10:21:59] 2026-03-31 08:21:59,314 [wrapper] ==== pilot stdout END ====
[2026-03-31 10:21:59] 2026-03-31 08:21:59,317 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 10:21:59] 2026-03-31 08:21:59,319 [wrapper] pilotpid: 1933998
[2026-03-31 10:21:59] 2026-03-31 08:21:59,321 [wrapper] Pilot exit status: 0
[2026-03-31 10:21:59] 2026-03-31 08:21:59,327 [wrapper] pandaids: 7072263870
[2026-03-31 10:21:59] 2026-03-31 08:21:59,339 [wrapper] cleanup supervisor_pilot 1943825 1933999
[2026-03-31 10:21:59] 2026-03-31 08:21:59,341 [wrapper] Test setup, not cleaning
[2026-03-31 10:21:59] 2026-03-31 08:21:59,343 [wrapper] apfmon messages muted
[2026-03-31 10:21:59] 2026-03-31 08:21:59,346 [wrapper] ==== wrapper stdout END ====
[2026-03-31 10:21:59] 2026-03-31 08:21:59,348 [wrapper] ==== wrapper stderr END ====
[2026-03-31 10:21:59]  *** Error codes and diagnostics ***
[2026-03-31 10:21:59]     "exeErrorCode": 0,
[2026-03-31 10:21:59]     "pilotErrorCode": 0,
[2026-03-31 10:21:59]  *** Listing of results directory ***
[2026-03-31 10:21:59] total 416648
[2026-03-31 10:21:59] -rw-r--r-- 1 boinc boinc    644034 Mar 30 19:48 pilot3.tar.gz
[2026-03-31 10:21:59] -rwx------ 1 boinc boinc     36322 Mar 30 19:49 runpilot2-wrapper.sh
[2026-03-31 10:21:59] -rw-r--r-- 1 boinc boinc      5118 Mar 30 19:50 queuedata.json
[2026-03-31 10:21:59] -rw-r--r-- 1 boinc boinc       100 Mar 31 08:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 10:21:59] -rwxr-xr-x 1 boinc boinc      7986 Mar 31 08:16 run_atlas
[2026-03-31 10:21:59] -rw-r--r-- 1 boinc boinc       105 Mar 31 08:16 job.xml
[2026-03-31 10:21:59] -rw-r--r-- 2 boinc boinc 225331136 Mar 31 08:16 EVNT.49263189._000262.pool.root.1
[2026-03-31 10:21:59] -rw-r--r-- 2 boinc boinc    656751 Mar 31 08:16 input.tar.gz
[2026-03-31 10:21:59] -rw-r--r-- 2 boinc boinc     15845 Mar 31 08:16 start_atlas.sh
[2026-03-31 10:21:59] drwxrwx--x 2 boinc boinc      4096 Mar 31 08:16 shared
[2026-03-31 10:21:59] -rw-r--r-- 1 boinc boinc         0 Mar 31 08:16 boinc_setup_complete
[2026-03-31 10:21:59] -rw-r--r-- 1 boinc boinc      6205 Mar 31 08:16 init_data.xml
[2026-03-31 10:21:59] -rw-r--r-- 1 boinc boinc         0 Mar 31 08:16 boinc_lockfile
[2026-03-31 10:21:59] -rw-r--r-- 1 boinc boinc      2574 Mar 31 08:16 pandaJob.out
[2026-03-31 10:21:59] -rw------- 1 boinc boinc   1003268 Mar 31 08:16 agis_schedconf.cvmfs.json
[2026-03-31 10:21:59] -rw------- 1 boinc boinc   1511579 Mar 31 08:16 agis_ddmendpoints.agis.ALL.json
[2026-03-31 10:21:59] -rw------- 1 boinc boinc       419 Mar 31 08:16 workernode_map.json
[2026-03-31 10:21:59] drwx------ 5 boinc boinc      4096 Mar 31 08:16 pilot3
[2026-03-31 10:21:59] -rw------- 1 boinc boinc 195394532 Mar 31 10:21 HITS.49263191._008403.pool.root.1
[2026-03-31 10:21:59] -rw------- 1 boinc boinc        95 Mar 31 10:21 pilot_heartbeat.json
[2026-03-31 10:21:59] -rw-r--r-- 1 boinc boinc       529 Mar 31 10:21 boinc_task_state.xml
[2026-03-31 10:21:59] -rw------- 1 boinc boinc      1015 Mar 31 10:21 memory_monitor_summary.json
[2026-03-31 10:21:59] -rw------- 1 boinc boinc    225422 Mar 31 10:21 log.49263191._008403.job.log.tgz.1
[2026-03-31 10:21:59] -rw------- 1 boinc boinc      6314 Mar 31 10:21 heartbeat_new.json
[2026-03-31 10:21:59] -rw------- 1 boinc boinc      6205 Mar 31 10:21 heartbeat.json
[2026-03-31 10:21:59] -rw-r--r-- 1 boinc boinc      8192 Mar 31 10:21 boinc_mmap_file
[2026-03-31 10:21:59] -rw-r--r-- 1 boinc boinc        27 Mar 31 10:21 wrapper_checkpoint.txt
[2026-03-31 10:21:59] -rw------- 1 boinc boinc       747 Mar 31 10:21 pilotlog.txt
[2026-03-31 10:21:59] -rw------- 1 boinc boinc    713108 Mar 31 10:21 log.49263191._008403.job.log.1
[2026-03-31 10:21:59] -rw------- 1 boinc boinc       357 Mar 31 10:21 output.list
[2026-03-31 10:21:59] -rw-r--r-- 1 boinc boinc       620 Mar 31 10:21 runtime_log
[2026-03-31 10:21:59] -rw------- 1 boinc boinc    952320 Mar 31 10:21 result.tar.gz
[2026-03-31 10:21:59] -rw-r--r-- 1 boinc boinc      8896 Mar 31 10:21 runtime_log.err
[2026-03-31 10:21:59] -rw------- 1 boinc boinc       658 Mar 31 10:21 nmYMDm0uVR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmVSQKDmbYIX7n.diag
[2026-03-31 10:21:59] -rw-r--r-- 1 boinc boinc      9736 Mar 31 10:21 stderr.txt
[2026-03-31 10:21:59] HITS file was successfully produced:
[2026-03-31 10:21:59] -rw------- 1 boinc boinc 195394532 Mar 31 10:21 shared/HITS.pool.root.1
[2026-03-31 10:21:59]  *** Contents of shared directory: ***
[2026-03-31 10:21:59] total 412464
[2026-03-31 10:21:59] -rw-r--r-- 2 boinc boinc 225331136 Mar 31 08:16 ATLAS.root_0
[2026-03-31 10:21:59] -rw-r--r-- 2 boinc boinc    656751 Mar 31 08:16 input.tar.gz
[2026-03-31 10:21:59] -rw-r--r-- 2 boinc boinc     15845 Mar 31 08:16 start_atlas.sh
[2026-03-31 10:21:59] -rw------- 1 boinc boinc 195394532 Mar 31 10:21 HITS.pool.root.1
[2026-03-31 10:21:59] -rw------- 1 boinc boinc    952320 Mar 31 10:21 result.tar.gz
10:22:00 (1929973): run_atlas exited; CPU time 14359.288927
10:22:00 (1929973): called boinc_finish(0)

</stderr_txt>
]]>

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