Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:32:39 (2970): wrapper (7.7.26015): starting
06:32:39 (2970): wrapper: running run_atlas (--nthreads 8)
[2026-03-31 06:32:39] Arguments: --nthreads 8
[2026-03-31 06:32:39] Threads: 8
[2026-03-31 06:32:39] Checking for CVMFS
[2026-03-31 06:32:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 06:32:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 06:32:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 06:32:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 06:32:42] 2.11.2.0 23466 151562 141016 157908 1 53 23243966 25165825 4688 130560 157 46607667 99.816 35034275 1040 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-31 06:32:42] CVMFS is ok
[2026-03-31 06:32:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 06:32:42] Checking for apptainer binary...
[2026-03-31 06:32:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 06:32:42] Running /usr/bin/apptainer --version
[2026-03-31 06:32:42] apptainer version 1.3.2-1.el7
[2026-03-31 06:32:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 06:33:03] cg-vwn389.simple-grid.lan
[2026-03-31 06:33:03] apptainer works
[2026-03-31 06:33:04] Set ATHENA_PROC_NUMBER=8
[2026-03-31 06:33:04] Set ATHENA_CORE_NUMBER=8
[2026-03-31 06:33:04] Starting ATLAS job with PandaID=7072263401
[2026-03-31 06:33:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 11:02:04]  *** The last 200 lines of the pilot log: ***
[2026-03-31 11:02:04] 2026-03-31 09:01:13,116 | INFO     | log transfer has been attempted: DONE
[2026-03-31 11:02:04] 2026-03-31 09:01:13,116 | INFO     | job 7072263401 has finished - writing final server update
[2026-03-31 11:02:04] 2026-03-31 09:01:13,117 | INFO     | total number of processed events: 400 (read)
[2026-03-31 11:02:04] 2026-03-31 09:01:13,119 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-7072263401/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 11:02:04] 2026-03-31 09:01:13,119 | INFO     | extracted standard info from prmon json
[2026-03-31 11:02:04] 2026-03-31 09:01:13,119 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 11:02:04] 2026-03-31 09:01:13,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 11:02:04] 2026-03-31 09:01:13,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 11:02:04] 2026-03-31 09:01:13,125 | INFO     | fitting pss+swap vs Time
[2026-03-31 11:02:04] 2026-03-31 09:01:13,126 | INFO     | sum of square deviations: 5081276667.5
[2026-03-31 11:02:04] 2026-03-31 09:01:13,128 | INFO     | sum of deviations: 86832456595.0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,128 | INFO     | mean x (centered): 0.0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,128 | INFO     | mean y: 2447998.346456693
[2026-03-31 11:02:04] 2026-03-31 09:01:13,129 | INFO     | intersect: 2447998.346456693
[2026-03-31 11:02:04] 2026-03-31 09:01:13,129 | INFO     | chi2: 6.552801631981284
[2026-03-31 11:02:04] 2026-03-31 09:01:13,130 | INFO     | sum of square deviations: 4787066500.0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,135 | INFO     | sum of deviations: 101401181755.0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,135 | INFO     | mean x (centered): 0.0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,135 | INFO     | mean y: 2455411.329317269
[2026-03-31 11:02:04] 2026-03-31 09:01:13,135 | INFO     | intersect: 2455411.329317269
[2026-03-31 11:02:04] 2026-03-31 09:01:13,136 | INFO     | chi2: 5.840326107765962
[2026-03-31 11:02:04] 2026-03-31 09:01:13,136 | INFO     | current chi2=5.840326107765962 (change=10.87283827940173 %)
[2026-03-31 11:02:04] 2026-03-31 09:01:13,136 | INFO     | right removable region: 248
[2026-03-31 11:02:04] 2026-03-31 09:01:13,137 | INFO     | sum of square deviations: 4787066500.0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,139 | INFO     | sum of deviations: -1366675536.9999962
[2026-03-31 11:02:04] 2026-03-31 09:01:13,139 | INFO     | mean x (centered): 0.0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,139 | INFO     | mean y: 2493680.0522088353
[2026-03-31 11:02:04] 2026-03-31 09:01:13,140 | INFO     | intersect: 2493680.0522088353
[2026-03-31 11:02:04] 2026-03-31 09:01:13,140 | INFO     | chi2: 1.8056688564120307
[2026-03-31 11:02:04] 2026-03-31 09:01:13,140 | INFO     | current chi2=1.8056688564120307 (change=72.44432293510349 %)
[2026-03-31 11:02:04] 2026-03-31 09:01:13,141 | INFO     | sum of square deviations: 4504437945.0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,143 | INFO     | sum of deviations: -33349820204.000008
[2026-03-31 11:02:04] 2026-03-31 09:01:13,143 | INFO     | mean x (centered): 0.0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,143 | INFO     | mean y: 2510809.3360655736
[2026-03-31 11:02:04] 2026-03-31 09:01:13,143 | INFO     | intersect: 2510809.3360655736
[2026-03-31 11:02:04] 2026-03-31 09:01:13,144 | INFO     | chi2: 0.9296580089525156
[2026-03-31 11:02:04] 2026-03-31 09:01:13,144 | INFO     | current chi2=0.9296580089525156 (change=48.514479515374695 %)
[2026-03-31 11:02:04] 2026-03-31 09:01:13,144 | INFO     | sum of square deviations: 4233158440.0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,146 | INFO     | sum of deviations: -32679678413.0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,147 | INFO     | mean x (centered): 0.0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,147 | INFO     | mean y: 2510403.40167364
[2026-03-31 11:02:04] 2026-03-31 09:01:13,147 | INFO     | intersect: 2510403.40167364
[2026-03-31 11:02:04] 2026-03-31 09:01:13,147 | INFO     | chi2: 0.9149813746009265
[2026-03-31 11:02:04] 2026-03-31 09:01:13,147 | INFO     | current chi2=0.9149813746009265 (change=1.5787132698534843 %)
[2026-03-31 11:02:04] 2026-03-31 09:01:13,148 | INFO     | left removable region: 15
[2026-03-31 11:02:04] 2026-03-31 09:01:13,148 | INFO     | sum of square deviations: 3922276332.0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,150 | INFO     | sum of deviations: -16667096124.000002
[2026-03-31 11:02:04] 2026-03-31 09:01:13,150 | INFO     | mean x (centered): 0.0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,150 | INFO     | mean y: 2519633.3261802574
[2026-03-31 11:02:04] 2026-03-31 09:01:13,150 | INFO     | intersect: 2519633.3261802574
[2026-03-31 11:02:04] 2026-03-31 09:01:13,151 | INFO     | chi2: 0.13233004303568305
[2026-03-31 11:02:04] 2026-03-31 09:01:13,151 | INFO     | current memory leak: -4.25 B/s (using 233 data points, chi2=0.13)
[2026-03-31 11:02:04] 2026-03-31 09:01:13,152 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-03-31 11:02:04] 2026-03-31 09:01:13,152 | INFO     | ..............................
[2026-03-31 11:02:04] 2026-03-31 09:01:13,152 | INFO     | . Timing measurements:
[2026-03-31 11:02:04] 2026-03-31 09:01:13,152 | INFO     | . get job = 0 s
[2026-03-31 11:02:04] 2026-03-31 09:01:13,152 | INFO     | . initial setup = 101 s
[2026-03-31 11:02:04] 2026-03-31 09:01:13,152 | INFO     | . payload setup = 192 s
[2026-03-31 11:02:04] 2026-03-31 09:01:13,152 | INFO     | . stage-in = 0 s
[2026-03-31 11:02:04] 2026-03-31 09:01:13,152 | INFO     | . payload execution = 15550 s
[2026-03-31 11:02:04] 2026-03-31 09:01:13,152 | INFO     | . stage-out = 3 s
[2026-03-31 11:02:04] 2026-03-31 09:01:13,153 | INFO     | . log creation = 1 s
[2026-03-31 11:02:04] 2026-03-31 09:01:13,153 | INFO     | ..............................
[2026-03-31 11:02:04] 2026-03-31 09:01:13,294 | INFO     | 
[2026-03-31 11:02:04] 2026-03-31 09:01:13,294 | INFO     | job summary report
[2026-03-31 11:02:04] 2026-03-31 09:01:13,294 | INFO     | --------------------------------------------------
[2026-03-31 11:02:04] 2026-03-31 09:01:13,294 | INFO     | PanDA job id: 7072263401
[2026-03-31 11:02:04] 2026-03-31 09:01:13,295 | INFO     | task id: 49263191
[2026-03-31 11:02:04] 2026-03-31 09:01:13,295 | INFO     | errors: (none)
[2026-03-31 11:02:04] 2026-03-31 09:01:13,295 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 11:02:04] 2026-03-31 09:01:13,295 | INFO     | pilot state: finished 
[2026-03-31 11:02:04] 2026-03-31 09:01:13,295 | INFO     | transexitcode: 0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,295 | INFO     | exeerrorcode: 0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,295 | INFO     | exeerrordiag: 
[2026-03-31 11:02:04] 2026-03-31 09:01:13,295 | INFO     | exitcode: 0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,295 | INFO     | exitmsg: OK
[2026-03-31 11:02:04] 2026-03-31 09:01:13,295 | INFO     | cpuconsumptiontime: 59814 s
[2026-03-31 11:02:04] 2026-03-31 09:01:13,295 | INFO     | nevents: 400
[2026-03-31 11:02:04] 2026-03-31 09:01:13,296 | INFO     | neventsw: 0
[2026-03-31 11:02:04] 2026-03-31 09:01:13,296 | INFO     | pid: 11659
[2026-03-31 11:02:04] 2026-03-31 09:01:13,296 | INFO     | pgrp: 11659
[2026-03-31 11:02:04] 2026-03-31 09:01:13,296 | INFO     | corecount: 8
[2026-03-31 11:02:04] 2026-03-31 09:01:13,296 | INFO     | event service: False
[2026-03-31 11:02:04] 2026-03-31 09:01:13,296 | INFO     | sizes: {0: 2279131, 1: 2280044, 2: 2281646, 13: 2281646, 15746: 2312821, 15751: 2321821, 15753: 2322005, 15754: 2322199}
[2026-03-31 11:02:04] 2026-03-31 09:01:13,296 | INFO     | --------------------------------------------------
[2026-03-31 11:02:04] 2026-03-31 09:01:13,296 | INFO     | 
[2026-03-31 11:02:04] 2026-03-31 09:01:13,296 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2026-03-31 11:02:04] 2026-03-31 09:01:13,549 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,549 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,550 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,550 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,550 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,550 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,550 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,550 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,550 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,550 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,551 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,551 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,551 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,551 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,551 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,551 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,551 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,551 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 11:02:04] 2026-03-31 09:01:13,552 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,552 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 11:02:04] 2026-03-31 09:01:13,552 | INFO     | job 7072263401 has completed (purged errors)
[2026-03-31 11:02:04] 2026-03-31 09:01:13,552 | INFO     | overall cleanup function is called
[2026-03-31 11:02:04] 2026-03-31 09:01:14,561 | INFO     | --- collectZombieJob: --- 10, [11659]
[2026-03-31 11:02:04] 2026-03-31 09:01:14,561 | INFO     | zombie collector waiting for pid 11659
[2026-03-31 11:02:04] 2026-03-31 09:01:14,561 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 11:02:04] 2026-03-31 09:01:14,562 | INFO     | collected zombie processes
[2026-03-31 11:02:04] 2026-03-31 09:01:14,562 | INFO     | will attempt to kill all subprocesses of pid=11659
[2026-03-31 11:02:04] 2026-03-31 09:01:14,695 | INFO     | process IDs to be killed: [11659] (in reverse order)
[2026-03-31 11:02:04] 2026-03-31 09:01:15,424 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 11:02:04] 2026-03-31 09:01:15,425 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 11:02:04] 2026-03-31 09:01:15,428 | INFO     | did not find any defunct processes belonging to 11659
[2026-03-31 11:02:04] 2026-03-31 09:01:15,435 | INFO     | did not find any defunct processes belonging to 11659
[2026-03-31 11:02:04] 2026-03-31 09:01:15,435 | INFO     | Ready for new job
[2026-03-31 11:02:04] 2026-03-31 09:01:15,437 | INFO     | **************************************
[2026-03-31 11:02:04] 2026-03-31 09:01:15,437 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 11:02:04] 2026-03-31 09:01:15,437 | INFO     | **************************************
[2026-03-31 11:02:04] 2026-03-31 09:01:15,437 | INFO     | 
[2026-03-31 11:02:04] 2026-03-31 09:01:15,438 | INFO     | pilot is running in a VM
[2026-03-31 11:02:04] 2026-03-31 09:01:15,438 | INFO     | architecture information:
[2026-03-31 11:02:04] 2026-03-31 09:01:15,442 | INFO     | executing command: cat /etc/os-release
[2026-03-31 11:02:04] 2026-03-31 09:01:15,713 | INFO     | cat /etc/os-release:
[2026-03-31 11:02:04] NAME="CentOS Linux"
[2026-03-31 11:02:04] VERSION="7 (Core)"
[2026-03-31 11:02:04] ID="centos"
[2026-03-31 11:02:04] ID_LIKE="rhel fedora"
[2026-03-31 11:02:04] VERSION_ID="7"
[2026-03-31 11:02:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 11:02:04] ANSI_COLOR="0;31"
[2026-03-31 11:02:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 11:02:04] HOME_URL="https://www.centos.org/"
[2026-03-31 11:02:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 11:02:04] 
[2026-03-31 11:02:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 11:02:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 11:02:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 11:02:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 11:02:04] 
[2026-03-31 11:02:04] 2026-03-31 09:01:15,713 | INFO     | **************************************
[2026-03-31 11:02:04] 2026-03-31 09:01:16,216 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2026-03-31 11:02:04] 2026-03-31 09:01:16,461 | INFO     | sufficient remaining disk space (496466132992 B)
[2026-03-31 11:02:04] 2026-03-31 09:01:16,462 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 11:02:04] 2026-03-31 09:01:16,462 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 11:02:04] 2026-03-31 09:01:16,462 | INFO     | update_server=False
[2026-03-31 11:02:04] 2026-03-31 09:01:16,462 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 11:02:04] 2026-03-31 09:01:16,463 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 11:02:04] 2026-03-31 09:01:16,728 | INFO     | all data control threads have been joined
[2026-03-31 11:02:04] 2026-03-31 09:01:16,903 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-31 11:02:04] 2026-03-31 09:01:16,903 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-31 11:02:04] 2026-03-31 09:01:16,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 11:02:04] 2026-03-31 09:01:16,903 | INFO     | will abort loop
[2026-03-31 11:02:04] 2026-03-31 09:01:17,103 | INFO     | all job control threads have been joined
[2026-03-31 11:02:04] 2026-03-31 09:01:17,468 | INFO     | [job] retrieve thread has finished
[2026-03-31 11:02:04] 2026-03-31 09:01:17,737 | INFO     | [data] control thread has finished
[2026-03-31 11:02:04] 2026-03-31 09:01:17,738 | INFO     | all payload control threads have been joined
[2026-03-31 11:02:04] 2026-03-31 09:01:17,908 | INFO     | [job] job monitor thread has finished
[2026-03-31 11:02:04] 2026-03-31 09:01:17,926 | INFO     | [data] copytool_in thread has finished
[2026-03-31 11:02:04] 2026-03-31 09:01:17,927 | INFO     | [job] validate thread has finished
[2026-03-31 11:02:04] 2026-03-31 09:01:18,109 | INFO     | [job] control thread has finished
[2026-03-31 11:02:04] 2026-03-31 09:01:18,253 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 11:02:04] 2026-03-31 09:01:18,308 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 11:02:04] 2026-03-31 09:01:18,331 | INFO     | [payload] validate_post thread has finished
[2026-03-31 11:02:04] 2026-03-31 09:01:18,469 | INFO     | [data] copytool_out thread has finished
[2026-03-31 11:02:04] 2026-03-31 09:01:18,485 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 11:02:04] 2026-03-31 09:01:18,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 11:02:04] 2026-03-31 09:01:18,640 | INFO     | [payload] failed_post thread has finished
[2026-03-31 11:02:04] 2026-03-31 09:01:18,740 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 11:02:04] 2026-03-31 09:01:18,744 | INFO     | [payload] control thread has finished
[2026-03-31 11:02:04] 2026-03-31 09:01:18,954 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 11:02:04] 2026-03-31 09:01:19,314 | INFO     | [job] queue monitor thread has finished
[2026-03-31 11:02:04] 2026-03-31 09:01:22,569 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 11:02:04] 2026-03-31 09:01:45,595 | INFO     | PID=7103 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-31 11:02:04] 2026-03-31 09:01:45,596 | INFO     | .. there are 9 such processes running
[2026-03-31 11:02:04] 2026-03-31 09:01:45,596 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 11:02:04] 2026-03-31 09:01:45,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 11:02:04] 2026-03-31 09:01:45,596 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 11:02:04] 2026-03-31 09:01:52,890 | INFO     | [monitor] cgroup control has ended
[2026-03-31 11:02:04] 2026-03-31 09:01:53,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139832435316544)>', '<ExcThread(monitor, started 139832139421440)>']
[2026-03-31 11:02:04] 2026-03-31 09:01:54,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 11:02:04] 2026-03-31 09:01:54,649 | INFO     | [monitor] control thread has ended
[2026-03-31 11:02:04] 2026-03-31 09:01:58,717 | INFO     | all workflow threads have been joined
[2026-03-31 11:02:04] 2026-03-31 09:01:58,717 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 11:02:04] 2026-03-31 09:01:58,717 | INFO     | traces error code: 0
[2026-03-31 11:02:04] 2026-03-31 09:01:58,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 11:02:04] 2026-03-31 09:01:59,174 [wrapper] ==== pilot stdout END ====
[2026-03-31 11:02:04] 2026-03-31 09:01:59,245 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 11:02:04] 2026-03-31 09:01:59,349 [wrapper] pilotpid: 7103
[2026-03-31 11:02:04] 2026-03-31 09:01:59,463 [wrapper] Pilot exit status: 0
[2026-03-31 11:02:04] 2026-03-31 09:01:59,828 [wrapper] pandaids: 7072263401
[2026-03-31 11:02:04] 2026-03-31 09:02:00,641 [wrapper] cleanup supervisor_pilot 20071 7104
[2026-03-31 11:02:04] 2026-03-31 09:02:00,685 [wrapper] Test setup, not cleaning
[2026-03-31 11:02:04] 2026-03-31 09:02:00,794 [wrapper] apfmon messages muted
[2026-03-31 11:02:04] 2026-03-31 09:02:00,925 [wrapper] ==== wrapper stdout END ====
[2026-03-31 11:02:04] 2026-03-31 09:02:01,037 [wrapper] ==== wrapper stderr END ====
[2026-03-31 11:02:04]  *** Error codes and diagnostics ***
[2026-03-31 11:02:04]     "exeErrorCode": 0,
[2026-03-31 11:02:04]     "pilotErrorCode": 0,
[2026-03-31 11:02:04]  *** Listing of results directory ***
[2026-03-31 11:02:04] total 411456
[2026-03-31 11:02:04] -rw-r--r--. 1 boinc boinc    644034 Mar 30 19:48 pilot3.tar.gz
[2026-03-31 11:02:04] -rw-r--r--. 1 boinc boinc      5118 Mar 30 19:48 queuedata.json
[2026-03-31 11:02:04] -rwx------. 1 boinc boinc     36322 Mar 30 19:49 runpilot2-wrapper.sh
[2026-03-31 11:02:04] -rw-r--r--. 1 boinc boinc       100 Mar 31 06:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 11:02:04] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 06:32 run_atlas
[2026-03-31 11:02:04] -rw-r--r--. 1 boinc boinc       105 Mar 31 06:32 job.xml
[2026-03-31 11:02:04] -rw-r--r--. 1 boinc boinc      6391 Mar 31 06:32 init_data.xml
[2026-03-31 11:02:04] -rw-r--r--. 2 boinc boinc 221619638 Mar 31 06:32 EVNT.49263189._000255.pool.root.1
[2026-03-31 11:02:04] -rw-r--r--. 2 boinc boinc     15845 Mar 31 06:32 start_atlas.sh
[2026-03-31 11:02:04] drwxrwx--x. 2 boinc boinc        68 Mar 31 06:32 shared
[2026-03-31 11:02:04] -rw-r--r--. 2 boinc boinc    656747 Mar 31 06:32 input.tar.gz
[2026-03-31 11:02:04] -rw-r--r--. 1 boinc boinc         0 Mar 31 06:32 boinc_lockfile
[2026-03-31 11:02:04] -rw-r--r--. 1 boinc boinc      2575 Mar 31 06:33 pandaJob.out
[2026-03-31 11:02:04] -rw-------. 1 boinc boinc       415 Mar 31 06:38 workernode_map.json
[2026-03-31 11:02:04] -rw-------. 1 boinc boinc   1004000 Mar 31 06:38 agis_schedconf.cvmfs.json
[2026-03-31 11:02:04] drwx------. 5 boinc boinc      4096 Mar 31 06:38 pilot3
[2026-03-31 11:02:04] -rw-------. 1 boinc boinc 191982454 Mar 31 10:59 HITS.49263191._008235.pool.root.1
[2026-03-31 11:02:04] -rw-r--r--. 1 boinc boinc       530 Mar 31 11:00 boinc_task_state.xml
[2026-03-31 11:02:04] -rw-------. 1 boinc boinc        95 Mar 31 11:00 pilot_heartbeat.json
[2026-03-31 11:02:04] -rw-------. 1 boinc boinc      1025 Mar 31 11:01 memory_monitor_summary.json
[2026-03-31 11:02:04] -rw-------. 1 boinc boinc   1511579 Mar 31 11:01 agis_ddmendpoints.agis.ALL.json
[2026-03-31 11:02:04] -rw-------. 1 boinc boinc    401158 Mar 31 11:01 log.49263191._008235.job.log.tgz.1
[2026-03-31 11:02:04] -rw-------. 1 boinc boinc      6335 Mar 31 11:01 heartbeat_new.json
[2026-03-31 11:02:04] -rw-------. 1 boinc boinc      6226 Mar 31 11:01 heartbeat.json
[2026-03-31 11:02:04] -rw-------. 1 boinc boinc      5065 Mar 31 11:01 pilotlog.txt
[2026-03-31 11:02:04] -rw-r--r--. 1 boinc boinc      8192 Mar 31 11:01 boinc_mmap_file
[2026-03-31 11:02:04] -rw-r--r--. 1 boinc boinc        28 Mar 31 11:01 wrapper_checkpoint.txt
[2026-03-31 11:02:04] -rw-------. 1 boinc boinc   1433751 Mar 31 11:02 log.49263191._008235.job.log.1
[2026-03-31 11:02:04] -rw-------. 1 boinc boinc       357 Mar 31 11:02 output.list
[2026-03-31 11:02:04] -rw-r--r--. 1 boinc boinc       620 Mar 31 11:02 runtime_log
[2026-03-31 11:02:04] -rw-------. 1 boinc boinc   1853440 Mar 31 11:02 result.tar.gz
[2026-03-31 11:02:04] -rw-r--r--. 1 boinc boinc      8832 Mar 31 11:02 runtime_log.err
[2026-03-31 11:02:04] -rw-------. 1 boinc boinc       655 Mar 31 11:02 mBzKDmmuVR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmESQKDmdkuXlm.diag
[2026-03-31 11:02:04] -rw-r--r--. 1 boinc boinc     20633 Mar 31 11:02 stderr.txt
[2026-03-31 11:02:04] HITS file was successfully produced:
[2026-03-31 11:02:04] -rw-------. 1 boinc boinc 191982454 Mar 31 10:59 shared/HITS.pool.root.1
[2026-03-31 11:02:04]  *** Contents of shared directory: ***
[2026-03-31 11:02:04] total 406384
[2026-03-31 11:02:04] -rw-r--r--. 2 boinc boinc 221619638 Mar 31 06:32 ATLAS.root_0
[2026-03-31 11:02:04] -rw-r--r--. 2 boinc boinc     15845 Mar 31 06:32 start_atlas.sh
[2026-03-31 11:02:04] -rw-r--r--. 2 boinc boinc    656747 Mar 31 06:32 input.tar.gz
[2026-03-31 11:02:04] -rw-------. 1 boinc boinc 191982454 Mar 31 10:59 HITS.pool.root.1
[2026-03-31 11:02:04] -rw-------. 1 boinc boinc   1853440 Mar 31 11:02 result.tar.gz
11:02:05 (2970): run_atlas exited; CPU time 60061.032355
11:02:05 (2970): called boinc_finish(0)

</stderr_txt>
]]>

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