Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:14:40 (248155): wrapper (7.7.26015): starting
15:14:40 (248155): wrapper: running run_atlas (--nthreads 12)
[2026-03-31 15:14:40] Arguments: --nthreads 12
[2026-03-31 15:14:40] Threads: 12
[2026-03-31 15:14:40] Checking for CVMFS
[2026-03-31 15:14:40] No cvmfs_config command found, will try listing directly
[2026-03-31 15:14:40] CVMFS is ok
[2026-03-31 15:14:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 15:14:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 15:14:40] Further information can be found at the LHC@home message board.
[2026-03-31 15:14:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 15:14:40] Checking for apptainer binary...
[2026-03-31 15:14:40] which: no apptainer in ((null))
[2026-03-31 15:14:40] apptainer is not installed, using version from CVMFS
[2026-03-31 15:14:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 15:14:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot252/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-31 15:14:40] apptainer works
[2026-03-31 15:14:40] Set ATHENA_PROC_NUMBER=12
[2026-03-31 15:14:40] Set ATHENA_CORE_NUMBER=12
[2026-03-31 15:14:40] Starting ATLAS job with PandaID=7074243191
[2026-03-31 15:14:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot252/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 15:44:12]  *** The last 200 lines of the pilot log: ***
[2026-03-31 15:44:12]  filesize=324621
[2026-03-31 15:44:12]  filetype=log
[2026-03-31 15:44:12]  guid=21038ba8-a706-4a18-b6be-d3ca56930882
[2026-03-31 15:44:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-31 15:44:12]  is_altstaged=None
[2026-03-31 15:44:12]  is_tar=False
[2026-03-31 15:44:12]  lfn=log.49499758._000106.job.log.tgz.1
[2026-03-31 15:44:12]  mtime=0
[2026-03-31 15:44:12]  protocol_id=None
[2026-03-31 15:44:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-31 15:44:12]  replicas=None
[2026-03-31 15:44:12]  scope=mc23_13p6TeV
[2026-03-31 15:44:12]  status=None
[2026-03-31 15:44:12]  status_code=0
[2026-03-31 15:44:12]  storage_token=
[2026-03-31 15:44:12]  surl=/var/lib/boinc/var/slot252/slots/1/PanDA_Pilot-7074243191/log.49499758._000106.job.log.tgz.1
[2026-03-31 15:44:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/8b/log.49499758._000106.job.log.tgz.1
[2026-03-31 15:44:12]  workdir=None
[2026-03-31 15:44:12] ]
[2026-03-31 15:44:12] 2026-03-31 13:42:53,496 | INFO     | transferring file log.49499758._000106.job.log.tgz.1 from /var/lib/boinc/var/slot252/slots/1/PanDA_Pilot-7074243191/log.49499758._000106.job.log.tgz.1 to /var/lib/
[2026-03-31 15:44:12] 2026-03-31 13:42:53,496 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot252/slots/1/PanDA_Pilot-7074243191/log.49499758._000106.job.log.tgz.1 /var/lib/boinc/var/slot252/slots/1/
[2026-03-31 15:44:12] 2026-03-31 13:42:53,511 | INFO     | adding to output.list: log.49499758._000106.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/8b/log.49499758._000106.job.log.tg
[2026-03-31 15:44:12] 2026-03-31 13:42:53,511 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-31 15:44:12] 2026-03-31 13:42:53,511 | INFO     | summary of transferred files:
[2026-03-31 15:44:12] 2026-03-31 13:42:53,512 | INFO     |  -- lfn=log.49499758._000106.job.log.tgz.1, status_code=0, status=transferred
[2026-03-31 15:44:12] 2026-03-31 13:42:53,512 | INFO     | stage-out finished correctly
[2026-03-31 15:44:12] 2026-03-31 13:42:53,757 | INFO     | monitor loop #128: job 0:7074243191 is in state 'finished'
[2026-03-31 15:44:12] 2026-03-31 13:42:53,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-31 15:44:12] 2026-03-31 13:42:54,429 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-31 15:44:12] 2026-03-31 13:42:56,260 | INFO     | monitor loop #129: job 0:7074243191 is in state 'finished'
[2026-03-31 15:44:12] 2026-03-31 13:42:56,260 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-31 15:44:12] 2026-03-31 13:42:57,112 | INFO     | job 7074243191 has state=finished
[2026-03-31 15:44:12] 2026-03-31 13:42:57,112 | INFO     | preparing for final server update for job 7074243191 in state='finished'
[2026-03-31 15:44:12] 2026-03-31 13:42:57,113 | INFO     | reading metadata from: /var/lib/boinc/var/slot252/slots/1/PanDA_Pilot-7074243191/jobReport.json
[2026-03-31 15:44:12] 2026-03-31 13:42:57,114 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot252/slots/1/workernode_map.json
[2026-03-31 15:44:12] 2026-03-31 13:42:57,114 | INFO     | this job has now completed (state=finished)
[2026-03-31 15:44:12] 2026-03-31 13:42:57,115 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 15:44:12] 2026-03-31 13:42:57,115 | INFO     | log transfer has been attempted: DONE
[2026-03-31 15:44:12] 2026-03-31 13:42:57,115 | INFO     | job 7074243191 has finished - writing final server update
[2026-03-31 15:44:12] 2026-03-31 13:42:57,115 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1122354/.job.ad'
[2026-03-31 15:44:12] 2026-03-31 13:42:57,115 | INFO     | total number of processed events: 400 (read)
[2026-03-31 15:44:12] 2026-03-31 13:42:57,132 | INFO     | using path: /var/lib/boinc/var/slot252/slots/1/PanDA_Pilot-7074243191/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 15:44:12] 2026-03-31 13:42:57,132 | INFO     | extracted standard info from prmon json
[2026-03-31 15:44:12] 2026-03-31 13:42:57,132 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 15:44:12] 2026-03-31 13:42:57,136 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 15:44:12] 2026-03-31 13:42:57,136 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 15:44:12] 2026-03-31 13:42:57,137 | INFO     | fitting pss+swap vs Time
[2026-03-31 15:44:12] 2026-03-31 13:42:57,137 | INFO     | sum of square deviations: 2865170.0
[2026-03-31 15:44:12] 2026-03-31 13:42:57,137 | INFO     | sum of deviations: 71535310.0
[2026-03-31 15:44:12] 2026-03-31 13:42:57,137 | INFO     | mean x (centered): 0.0
[2026-03-31 15:44:12] 2026-03-31 13:42:57,137 | INFO     | mean y: 2735773.8095238097
[2026-03-31 15:44:12] 2026-03-31 13:42:57,137 | INFO     | intersect: 2735773.8095238097
[2026-03-31 15:44:12] 2026-03-31 13:42:57,137 | INFO     | chi2: 3.1891111812818305e-05
[2026-03-31 15:44:12] 2026-03-31 13:42:57,137 | INFO     | current memory leak: 24.97 B/s (using 21 data points, chi2=0.00)
[2026-03-31 15:44:12] 2026-03-31 13:42:57,138 | INFO     | could have reported an average CPU frequency of 3585 MHz (4 samples)
[2026-03-31 15:44:12] 2026-03-31 13:42:57,138 | INFO     | ..............................
[2026-03-31 15:44:12] 2026-03-31 13:42:57,138 | INFO     | . Timing measurements:
[2026-03-31 15:44:12] 2026-03-31 13:42:57,138 | INFO     | . get job = 0 s
[2026-03-31 15:44:12] 2026-03-31 13:42:57,138 | INFO     | . initial setup = 4 s
[2026-03-31 15:44:12] 2026-03-31 13:42:57,138 | INFO     | . payload setup = 6 s
[2026-03-31 15:44:12] 2026-03-31 13:42:57,138 | INFO     | . stage-in = 0 s
[2026-03-31 15:44:12] 2026-03-31 13:42:57,138 | INFO     | . payload execution = 1658 s
[2026-03-31 15:44:12] 2026-03-31 13:42:57,138 | INFO     | . stage-out = 0 s
[2026-03-31 15:44:12] 2026-03-31 13:42:57,138 | INFO     | . log creation = 0 s
[2026-03-31 15:44:12] 2026-03-31 13:42:57,138 | INFO     | ..............................
[2026-03-31 15:44:12] 2026-03-31 13:42:57,199 | INFO     | 
[2026-03-31 15:44:12] 2026-03-31 13:42:57,199 | INFO     | job summary report
[2026-03-31 15:44:12] 2026-03-31 13:42:57,199 | INFO     | --------------------------------------------------
[2026-03-31 15:44:12] 2026-03-31 13:42:57,199 | INFO     | PanDA job id: 7074243191
[2026-03-31 15:44:12] 2026-03-31 13:42:57,199 | INFO     | task id: 49499758
[2026-03-31 15:44:12] 2026-03-31 13:42:57,199 | INFO     | errors: (none)
[2026-03-31 15:44:12] 2026-03-31 13:42:57,199 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 15:44:12] 2026-03-31 13:42:57,199 | INFO     | pilot state: finished 
[2026-03-31 15:44:12] 2026-03-31 13:42:57,199 | INFO     | transexitcode: 0
[2026-03-31 15:44:12] 2026-03-31 13:42:57,199 | INFO     | exeerrorcode: 0
[2026-03-31 15:44:12] 2026-03-31 13:42:57,199 | INFO     | exeerrordiag: 
[2026-03-31 15:44:12] 2026-03-31 13:42:57,199 | INFO     | exitcode: 0
[2026-03-31 15:44:12] 2026-03-31 13:42:57,200 | INFO     | exitmsg: OK
[2026-03-31 15:44:12] 2026-03-31 13:42:57,200 | INFO     | cpuconsumptiontime: 16912 s
[2026-03-31 15:44:12] 2026-03-31 13:42:57,200 | INFO     | nevents: 400
[2026-03-31 15:44:12] 2026-03-31 13:42:57,200 | INFO     | neventsw: 0
[2026-03-31 15:44:12] 2026-03-31 13:42:57,200 | INFO     | pid: 258788
[2026-03-31 15:44:12] 2026-03-31 13:42:57,200 | INFO     | pgrp: 258788
[2026-03-31 15:44:12] 2026-03-31 13:42:57,200 | INFO     | corecount: 12
[2026-03-31 15:44:12] 2026-03-31 13:42:57,200 | INFO     | event service: False
[2026-03-31 15:44:12] 2026-03-31 13:42:57,200 | INFO     | sizes: {0: 2279808, 1: 2281637, 11: 2281637, 1669: 2306473, 1670: 2315495, 1671: 2315551, 1674: 2315873}
[2026-03-31 15:44:12] 2026-03-31 13:42:57,200 | INFO     | --------------------------------------------------
[2026-03-31 15:44:12] 2026-03-31 13:42:57,200 | INFO     | 
[2026-03-31 15:44:12] 2026-03-31 13:42:57,200 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot252/slots/1
[2026-03-31 15:44:12] 2026-03-31 13:42:57,217 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,217 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | job 7074243191 has completed (purged errors)
[2026-03-31 15:44:12] 2026-03-31 13:42:57,218 | INFO     | overall cleanup function is called
[2026-03-31 15:44:12] 2026-03-31 13:42:58,225 | INFO     | --- collectZombieJob: --- 10, [258788]
[2026-03-31 15:44:12] 2026-03-31 13:42:58,226 | INFO     | zombie collector waiting for pid 258788
[2026-03-31 15:44:12] 2026-03-31 13:42:58,226 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 15:44:12] 2026-03-31 13:42:58,226 | INFO     | collected zombie processes
[2026-03-31 15:44:12] 2026-03-31 13:42:58,226 | INFO     | will attempt to kill all subprocesses of pid=258788
[2026-03-31 15:44:12] 2026-03-31 13:42:58,587 | INFO     | process IDs to be killed: [258788] (in reverse order)
[2026-03-31 15:44:12] 2026-03-31 13:42:58,740 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 15:44:12] 2026-03-31 13:42:58,740 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 15:44:12] 2026-03-31 13:42:58,765 | INFO     | did not find any defunct processes belonging to 258788
[2026-03-31 15:44:12] 2026-03-31 13:42:58,789 | INFO     | did not find any defunct processes belonging to 258788
[2026-03-31 15:44:12] 2026-03-31 13:42:58,789 | INFO     | Ready for new job
[2026-03-31 15:44:12] 2026-03-31 13:42:58,790 | INFO     | **************************************
[2026-03-31 15:44:12] 2026-03-31 13:42:58,790 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 15:44:12] 2026-03-31 13:42:58,790 | INFO     | **************************************
[2026-03-31 15:44:12] 2026-03-31 13:42:58,790 | INFO     | 
[2026-03-31 15:44:12] 2026-03-31 13:42:58,796 | INFO     | architecture information:
[2026-03-31 15:44:12] 2026-03-31 13:42:58,797 | INFO     | executing command: cat /etc/os-release
[2026-03-31 15:44:12] 2026-03-31 13:42:58,810 | INFO     | cat /etc/os-release:
[2026-03-31 15:44:12] NAME="CentOS Linux"
[2026-03-31 15:44:12] VERSION="7 (Core)"
[2026-03-31 15:44:12] ID="centos"
[2026-03-31 15:44:12] ID_LIKE="rhel fedora"
[2026-03-31 15:44:12] VERSION_ID="7"
[2026-03-31 15:44:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 15:44:12] ANSI_COLOR="0;31"
[2026-03-31 15:44:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 15:44:12] HOME_URL="https://www.centos.org/"
[2026-03-31 15:44:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 15:44:12] 
[2026-03-31 15:44:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 15:44:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 15:44:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 15:44:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 15:44:12] 
[2026-03-31 15:44:12] 2026-03-31 13:42:58,810 | INFO     | **************************************
[2026-03-31 15:44:12] 2026-03-31 13:42:59,313 | INFO     | executing command: df -mP /var/lib/boinc/var/slot252/slots/1
[2026-03-31 15:44:12] 2026-03-31 13:42:59,328 | INFO     | sufficient remaining disk space (187016675328 B)
[2026-03-31 15:44:12] 2026-03-31 13:42:59,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 15:44:12] 2026-03-31 13:42:59,328 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 15:44:12] 2026-03-31 13:42:59,328 | INFO     | update_server=False
[2026-03-31 15:44:12] 2026-03-31 13:42:59,328 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 15:44:12] 2026-03-31 13:42:59,328 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 15:44:12] 2026-03-31 13:42:59,769 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 15:44:12] 2026-03-31 13:42:59,769 | INFO     | aborting loop
[2026-03-31 15:44:12] 2026-03-31 13:43:00,091 | INFO     | all data control threads have been joined
[2026-03-31 15:44:12] 2026-03-31 13:43:00,333 | INFO     | [job] retrieve thread has finished
[2026-03-31 15:44:12] 2026-03-31 13:43:00,482 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 15:44:12] 2026-03-31 13:43:00,503 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 15:44:12] 2026-03-31 13:43:00,774 | INFO     | [job] job monitor thread has finished
[2026-03-31 15:44:12] 2026-03-31 13:43:00,787 | INFO     | all job control threads have been joined
[2026-03-31 15:44:12] 2026-03-31 13:43:00,790 | INFO     | all payload control threads have been joined
[2026-03-31 15:44:12] 2026-03-31 13:43:01,054 | INFO     | [payload] validate_post thread has finished
[2026-03-31 15:44:12] 2026-03-31 13:43:01,095 | INFO     | [data] control thread has finished
[2026-03-31 15:44:12] 2026-03-31 13:43:01,194 | INFO     | [payload] failed_post thread has finished
[2026-03-31 15:44:12] 2026-03-31 13:43:01,195 | INFO     | [job] validate thread has finished
[2026-03-31 15:44:12] 2026-03-31 13:43:01,305 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 15:44:12] 2026-03-31 13:43:01,334 | INFO     | [data] copytool_out thread has finished
[2026-03-31 15:44:12] 2026-03-31 13:43:01,484 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 15:44:12] 2026-03-31 13:43:01,581 | INFO     | [data] copytool_in thread has finished
[2026-03-31 15:44:12] 2026-03-31 13:43:01,792 | INFO     | [payload] control thread has finished
[2026-03-31 15:44:12] 2026-03-31 13:43:01,793 | INFO     | [job] control thread has finished
[2026-03-31 15:44:12] 2026-03-31 13:43:02,197 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 15:44:12] 2026-03-31 13:43:03,201 | INFO     | [job] queue monitor thread has finished
[2026-03-31 15:44:12] 2026-03-31 13:43:04,488 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 15:44:12] 2026-03-31 13:43:10,339 | INFO     | job.realtimelogging is not enabled
[2026-03-31 15:44:12] 2026-03-31 13:43:11,344 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 15:44:12] 2026-03-31 13:43:29,893 | INFO     | PID=252678 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-31 15:44:12] 2026-03-31 13:43:29,893 | INFO     | .. there are 15 such processes running
[2026-03-31 15:44:12] 2026-03-31 13:43:29,893 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 15:44:12] 2026-03-31 13:43:29,893 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 15:44:12] 2026-03-31 13:43:29,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 15:44:12] 2026-03-31 13:43:54,684 | INFO     | [monitor] cgroup control has ended
[2026-03-31 15:44:12] 2026-03-31 13:43:55,908 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23204733331264)>', '<ExcThread(monitor, started 23204426925824)>']
[2026-03-31 15:44:12] 2026-03-31 13:43:55,999 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 15:44:12] 2026-03-31 13:43:55,999 | INFO     | [monitor] control thread has ended
[2026-03-31 15:44:12] 2026-03-31 13:44:00,932 | INFO     | all workflow threads have been joined
[2026-03-31 15:44:12] 2026-03-31 13:44:00,933 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 15:44:12] 2026-03-31 13:44:00,933 | INFO     | traces error code: 0
[2026-03-31 15:44:12] 2026-03-31 13:44:00,933 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 15:44:12] 2026-03-31 13:44:01,082 [wrapper] ==== pilot stdout END ====
[2026-03-31 15:44:12] 2026-03-31 13:44:01,085 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 15:44:12] 2026-03-31 13:44:01,087 [wrapper] pilotpid: 252678
[2026-03-31 15:44:12] 2026-03-31 13:44:01,090 [wrapper] Pilot exit status: 0
[2026-03-31 15:44:12] 2026-03-31 13:44:01,100 [wrapper] pandaids: 7074243191
[2026-03-31 15:44:12] 2026-03-31 13:44:01,204 [wrapper] cleanup supervisor_pilot  309235 252679
[2026-03-31 15:44:12] 2026-03-31 13:44:01,207 [wrapper] Test setup, not cleaning
[2026-03-31 15:44:12] 2026-03-31 13:44:01,210 [wrapper] apfmon messages muted
[2026-03-31 15:44:12] 2026-03-31 13:44:01,212 [wrapper] ==== wrapper stdout END ====
[2026-03-31 15:44:12] 2026-03-31 13:44:01,214 [wrapper] ==== wrapper stderr END ====
[2026-03-31 15:44:12]  *** Error codes and diagnostics ***
[2026-03-31 15:44:12]     "exeErrorCode": 0,
[2026-03-31 15:44:12]     "pilotErrorCode": 0,
[2026-03-31 15:44:12]  *** Listing of results directory ***
[2026-03-31 15:44:12] total 429228
[2026-03-31 15:44:12] -rw-r--r--. 1 boinc boinc      5118 Mar 30 15:43 queuedata.json
[2026-03-31 15:44:12] -rwx------. 1 boinc boinc     36322 Mar 30 15:45 runpilot2-wrapper.sh
[2026-03-31 15:44:12] -rw-r--r--. 1 boinc boinc    644034 Mar 30 15:47 pilot3.tar.gz
[2026-03-31 15:44:12] -rw-r--r--. 1 boinc boinc       100 Mar 31 15:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 15:44:12] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 15:14 run_atlas
[2026-03-31 15:44:12] -rw-r--r--. 1 boinc boinc       105 Mar 31 15:14 job.xml
[2026-03-31 15:44:12] -rw-r--r--. 2 boinc boinc 258438803 Mar 31 15:14 EVNT.49474642._000005.pool.root.1
[2026-03-31 15:44:12] -rw-r--r--. 2 boinc boinc     15845 Mar 31 15:14 start_atlas.sh
[2026-03-31 15:44:12] drwxrwx--x. 2 boinc boinc      4096 Mar 31 15:14 shared
[2026-03-31 15:44:12] -rw-r--r--. 2 boinc boinc    656753 Mar 31 15:14 input.tar.gz
[2026-03-31 15:44:12] -rw-r--r--. 1 boinc boinc      6713 Mar 31 15:14 init_data.xml
[2026-03-31 15:44:12] -rw-r--r--. 1 boinc boinc         0 Mar 31 15:14 boinc_lockfile
[2026-03-31 15:44:12] -rw-r--r--. 1 boinc boinc      2581 Mar 31 15:14 pandaJob.out
[2026-03-31 15:44:12] -rw-------. 1 boinc boinc   1003225 Mar 31 15:14 agis_schedconf.cvmfs.json
[2026-03-31 15:44:12] -rw-------. 1 boinc boinc   1511579 Mar 31 15:14 agis_ddmendpoints.agis.ALL.json
[2026-03-31 15:44:12] -rw-------. 1 boinc boinc       444 Mar 31 15:14 workernode_map.json
[2026-03-31 15:44:12] drwx------. 5 boinc boinc      4096 Mar 31 15:14 pilot3
[2026-03-31 15:44:12] -rw-------. 1 boinc boinc 175971484 Mar 31 15:42 HITS.49499758._000106.pool.root.1
[2026-03-31 15:44:12] -rw-r--r--. 1 boinc boinc       529 Mar 31 15:42 boinc_task_state.xml
[2026-03-31 15:44:12] -rw-------. 1 boinc boinc      1029 Mar 31 15:42 memory_monitor_summary.json
[2026-03-31 15:44:12] -rw-------. 1 boinc boinc    324621 Mar 31 15:42 log.49499758._000106.job.log.tgz.1
[2026-03-31 15:44:12] -rw-------. 1 boinc boinc      6369 Mar 31 15:42 heartbeat_new.json
[2026-03-31 15:44:12] -rw-------. 1 boinc boinc      6260 Mar 31 15:42 heartbeat.json
[2026-03-31 15:44:12] -rw-------. 1 boinc boinc        95 Mar 31 15:43 pilot_heartbeat.json
[2026-03-31 15:44:12] -rw-------. 1 boinc boinc      4901 Mar 31 15:44 pilotlog.txt
[2026-03-31 15:44:12] -rw-------. 1 boinc boinc    204282 Mar 31 15:44 log.49499758._000106.job.log.1
[2026-03-31 15:44:12] -rw-------. 1 boinc boinc       357 Mar 31 15:44 output.list
[2026-03-31 15:44:12] -rw-r--r--. 1 boinc boinc       620 Mar 31 15:44 runtime_log
[2026-03-31 15:44:12] -rw-------. 1 boinc boinc    542720 Mar 31 15:44 result.tar.gz
[2026-03-31 15:44:12] -rw-r--r--. 1 boinc boinc      9223 Mar 31 15:44 runtime_log.err
[2026-03-31 15:44:12] -rw-------. 1 boinc boinc       657 Mar 31 15:44 hsfMDmA7RR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmIrNKDmrwuxbm.diag
[2026-03-31 15:44:12] -rw-r--r--. 1 boinc boinc        26 Mar 31 15:44 wrapper_checkpoint.txt
[2026-03-31 15:44:12] -rw-r--r--. 1 boinc boinc      8192 Mar 31 15:44 boinc_mmap_file
[2026-03-31 15:44:12] -rw-r--r--. 1 boinc boinc     21017 Mar 31 15:44 stderr.txt
[2026-03-31 15:44:12] HITS file was successfully produced:
[2026-03-31 15:44:12] -rw-------. 1 boinc boinc 175971484 Mar 31 15:42 shared/HITS.pool.root.1
[2026-03-31 15:44:12]  *** Contents of shared directory: ***
[2026-03-31 15:44:12] total 425432
[2026-03-31 15:44:12] -rw-r--r--. 2 boinc boinc 258438803 Mar 31 15:14 ATLAS.root_0
[2026-03-31 15:44:12] -rw-r--r--. 2 boinc boinc     15845 Mar 31 15:14 start_atlas.sh
[2026-03-31 15:44:12] -rw-r--r--. 2 boinc boinc    656753 Mar 31 15:14 input.tar.gz
[2026-03-31 15:44:12] -rw-------. 1 boinc boinc 175971484 Mar 31 15:42 HITS.pool.root.1
[2026-03-31 15:44:12] -rw-------. 1 boinc boinc    542720 Mar 31 15:44 result.tar.gz
15:44:13 (248155): run_atlas exited; CPU time 16963.390241
15:44:13 (248155): called boinc_finish(0)

</stderr_txt>
]]>

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