Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:37:04 (1474017): wrapper (7.7.26015): starting
15:37:04 (1474017): wrapper: running run_atlas (--nthreads 9)
[2026-03-30 15:37:04] Arguments: --nthreads 9
[2026-03-30 15:37:04] Threads: 9
[2026-03-30 15:37:04] Checking for CVMFS
[2026-03-30 15:37:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 15:37:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 15:37:25] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 15:37:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 15:37:26] 2.13.3.0 5955 169698 623140 157894 1 309 28022038 32935936 12720 16776704 0 449069865 99.487 707409165 38390 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-30 15:37:26] CVMFS is ok
[2026-03-30 15:37:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 15:37:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 15:37:26] Further information can be found at the LHC@home message board.
[2026-03-30 15:37:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 15:37:26] Checking for apptainer binary...
[2026-03-30 15:37:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 15:37:26] Running /usr/bin/apptainer --version
[2026-03-30 15:37:26] apptainer version 1.4.5-2.el9
[2026-03-30 15:37:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 15:37:27] c6-1-24-4.aglt2.org
[2026-03-30 15:37:27] apptainer works
[2026-03-30 15:37:27] Set ATHENA_PROC_NUMBER=9
[2026-03-30 15:37:27] Set ATHENA_CORE_NUMBER=9
[2026-03-30 15:37:27] Starting ATLAS job with PandaID=7074345289
[2026-03-30 15:37:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:31:51 (1682290): wrapper (7.7.26015): starting
16:31:51 (1682290): wrapper: running run_atlas (--nthreads 11)
[2026-03-30 16:31:51] Arguments: --nthreads 11
[2026-03-30 16:31:51] Threads: 11
[2026-03-30 16:31:51] This job has been restarted, cleaning up previous attempt
[2026-03-30 16:31:51] Checking for CVMFS
[2026-03-30 16:31:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 16:31:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 16:31:52] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 16:31:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 16:31:52] 2.13.3.0 5955 169752 628628 157895 2 544 28344866 32935937 10869 16776704 0 449323861 99.487 707473209 38391 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-30 16:31:52] CVMFS is ok
[2026-03-30 16:31:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 16:31:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 16:31:52] Further information can be found at the LHC@home message board.
[2026-03-30 16:31:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 16:31:52] Checking for apptainer binary...
[2026-03-30 16:31:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 16:31:52] Running /usr/bin/apptainer --version
[2026-03-30 16:31:52] apptainer version 1.4.5-2.el9
[2026-03-30 16:31:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 16:31:52] c6-1-24-4.aglt2.org
[2026-03-30 16:31:52] apptainer works
[2026-03-30 16:31:52] Set ATHENA_PROC_NUMBER=11
[2026-03-30 16:31:52] Set ATHENA_CORE_NUMBER=11
[2026-03-30 16:31:52] Starting ATLAS job with PandaID=7074345289
[2026-03-30 16:31:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-30 19:14:25]  *** The last 200 lines of the pilot log: ***
[2026-03-30 19:14:25] 2026-03-30 23:13:41,238 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-30 19:14:25] 2026-03-30 23:13:41,238 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7074345289/jobReport.json
[2026-03-30 19:14:25] 2026-03-30 23:13:41,240 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-03-30 19:14:25] 2026-03-30 23:13:41,241 | INFO     | this job has now completed (state=finished)
[2026-03-30 19:14:25] 2026-03-30 23:13:41,241 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-30 19:14:25] 2026-03-30 23:13:41,241 | INFO     | log transfer has been attempted: DONE
[2026-03-30 19:14:25] 2026-03-30 23:13:41,241 | INFO     | job 7074345289 has finished - writing final server update
[2026-03-30 19:14:25] 2026-03-30 23:13:41,242 | INFO     | total number of processed events: 400 (read)
[2026-03-30 19:14:25] 2026-03-30 23:13:41,251 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7074345289/memory_monitor_summary.json (trf name=prmon)
[2026-03-30 19:14:25] 2026-03-30 23:13:41,251 | INFO     | extracted standard info from prmon json
[2026-03-30 19:14:25] 2026-03-30 23:13:41,252 | INFO     | extracted standard memory fields from prmon json
[2026-03-30 19:14:25] 2026-03-30 23:13:41,252 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-30 19:14:25] 2026-03-30 23:13:41,252 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-30 19:14:25] 2026-03-30 23:13:41,255 | INFO     | fitting pss+swap vs Time
[2026-03-30 19:14:25] 2026-03-30 23:13:41,255 | INFO     | sum of square deviations: 1246424542.4276748
[2026-03-30 19:14:25] 2026-03-30 23:13:41,256 | INFO     | sum of deviations: 9036453379.974852
[2026-03-30 19:14:25] 2026-03-30 23:13:41,256 | INFO     | mean x (centered): 0.0
[2026-03-30 19:14:25] 2026-03-30 23:13:41,256 | INFO     | mean y: 2678717.4465408805
[2026-03-30 19:14:25] 2026-03-30 23:13:41,256 | INFO     | intersect: 2678717.4465408805
[2026-03-30 19:14:25] 2026-03-30 23:13:41,256 | INFO     | chi2: 1.27981667828655
[2026-03-30 19:14:25] 2026-03-30 23:13:41,257 | INFO     | sum of square deviations: 1132516649.0649304
[2026-03-30 19:14:25] 2026-03-30 23:13:41,257 | INFO     | sum of deviations: 8582181943.376624
[2026-03-30 19:14:25] 2026-03-30 23:13:41,257 | INFO     | mean x (centered): 0.0
[2026-03-30 19:14:25] 2026-03-30 23:13:41,257 | INFO     | mean y: 2678110.948051948
[2026-03-30 19:14:25] 2026-03-30 23:13:41,258 | INFO     | intersect: 2678110.948051948
[2026-03-30 19:14:25] 2026-03-30 23:13:41,258 | INFO     | chi2: 1.2805603866944972
[2026-03-30 19:14:25] 2026-03-30 23:13:41,258 | INFO     | current chi2=1.2805603866944972 (change=-0.05811054196784066 %)
[2026-03-30 19:14:25] 2026-03-30 23:13:41,258 | INFO     | right removable region: 153
[2026-03-30 19:14:25] 2026-03-30 23:13:41,258 | INFO     | sum of square deviations: 1132476999.0649304
[2026-03-30 19:14:25] 2026-03-30 23:13:41,259 | INFO     | sum of deviations: -12312766767.623365
[2026-03-30 19:14:25] 2026-03-30 23:13:41,259 | INFO     | mean x (centered): 0.0
[2026-03-30 19:14:25] 2026-03-30 23:13:41,259 | INFO     | mean y: 2706777.948051948
[2026-03-30 19:14:25] 2026-03-30 23:13:41,259 | INFO     | intersect: 2706777.948051948
[2026-03-30 19:14:25] 2026-03-30 23:13:41,259 | INFO     | chi2: 0.022099607427866468
[2026-03-30 19:14:25] 2026-03-30 23:13:41,259 | INFO     | current chi2=0.022099607427866468 (change=98.27322086023648 %)
[2026-03-30 19:14:25] 2026-03-30 23:13:41,260 | INFO     | sum of square deviations: 1025692380.6442987
[2026-03-30 19:14:25] 2026-03-30 23:13:41,260 | INFO     | sum of deviations: -11254237174.570469
[2026-03-30 19:14:25] 2026-03-30 23:13:41,261 | INFO     | mean x (centered): 0.0
[2026-03-30 19:14:25] 2026-03-30 23:13:41,261 | INFO     | mean y: 2705255.624161074
[2026-03-30 19:14:25] 2026-03-30 23:13:41,261 | INFO     | intersect: 2705255.624161074
[2026-03-30 19:14:25] 2026-03-30 23:13:41,261 | INFO     | chi2: 0.02189200101003228
[2026-03-30 19:14:25] 2026-03-30 23:13:41,261 | INFO     | current chi2=0.02189200101003228 (change=0.939412243008484 %)
[2026-03-30 19:14:25] 2026-03-30 23:13:41,261 | INFO     | left removable region: 10
[2026-03-30 19:14:25] 2026-03-30 23:13:41,261 | INFO     | sum of square deviations: 906726031.4545482
[2026-03-30 19:14:25] 2026-03-30 23:13:41,262 | INFO     | sum of deviations: -11030042442.727276
[2026-03-30 19:14:25] 2026-03-30 23:13:41,262 | INFO     | mean x (centered): 0.0
[2026-03-30 19:14:25] 2026-03-30 23:13:41,262 | INFO     | mean y: 2705603.3496503495
[2026-03-30 19:14:25] 2026-03-30 23:13:41,262 | INFO     | intersect: 2705603.3496503495
[2026-03-30 19:14:25] 2026-03-30 23:13:41,262 | INFO     | chi2: 0.020368161601989627
[2026-03-30 19:14:25] 2026-03-30 23:13:41,263 | INFO     | current memory leak: -12.16 B/s (using 143 data points, chi2=0.02)
[2026-03-30 19:14:25] 2026-03-30 23:13:41,263 | INFO     | could have reported an average CPU frequency of 3085 MHz (9 samples)
[2026-03-30 19:14:25] 2026-03-30 23:13:41,263 | INFO     | ..............................
[2026-03-30 19:14:25] 2026-03-30 23:13:41,263 | INFO     | . Timing measurements:
[2026-03-30 19:14:25] 2026-03-30 23:13:41,263 | INFO     | . get job = 0 s
[2026-03-30 19:14:25] 2026-03-30 23:13:41,263 | INFO     | . initial setup = 1 s
[2026-03-30 19:14:25] 2026-03-30 23:13:41,263 | INFO     | . payload setup = 8 s
[2026-03-30 19:14:25] 2026-03-30 23:13:41,263 | INFO     | . stage-in = 0 s
[2026-03-30 19:14:25] 2026-03-30 23:13:41,264 | INFO     | . payload execution = 9672 s
[2026-03-30 19:14:25] 2026-03-30 23:13:41,264 | INFO     | . stage-out = 1 s
[2026-03-30 19:14:25] 2026-03-30 23:13:41,264 | INFO     | . log creation = 0 s
[2026-03-30 19:14:25] 2026-03-30 23:13:41,264 | INFO     | ..............................
[2026-03-30 19:14:25] 2026-03-30 23:13:41,469 | INFO     | 
[2026-03-30 19:14:25] 2026-03-30 23:13:41,469 | INFO     | job summary report
[2026-03-30 19:14:25] 2026-03-30 23:13:41,470 | INFO     | --------------------------------------------------
[2026-03-30 19:14:25] 2026-03-30 23:13:41,470 | INFO     | PanDA job id: 7074345289
[2026-03-30 19:14:25] 2026-03-30 23:13:41,470 | INFO     | task id: 49499571
[2026-03-30 19:14:25] 2026-03-30 23:13:41,470 | INFO     | errors: (none)
[2026-03-30 19:14:25] 2026-03-30 23:13:41,470 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-30 19:14:25] 2026-03-30 23:13:41,470 | INFO     | pilot state: finished 
[2026-03-30 19:14:25] 2026-03-30 23:13:41,470 | INFO     | transexitcode: 0
[2026-03-30 19:14:25] 2026-03-30 23:13:41,470 | INFO     | exeerrorcode: 0
[2026-03-30 19:14:25] 2026-03-30 23:13:41,470 | INFO     | exeerrordiag: 
[2026-03-30 19:14:25] 2026-03-30 23:13:41,470 | INFO     | exitcode: 0
[2026-03-30 19:14:25] 2026-03-30 23:13:41,470 | INFO     | exitmsg: OK
[2026-03-30 19:14:25] 2026-03-30 23:13:41,470 | INFO     | cpuconsumptiontime: 41602 s
[2026-03-30 19:14:25] 2026-03-30 23:13:41,470 | INFO     | nevents: 400
[2026-03-30 19:14:25] 2026-03-30 23:13:41,470 | INFO     | neventsw: 0
[2026-03-30 19:14:25] 2026-03-30 23:13:41,470 | INFO     | pid: 1700605
[2026-03-30 19:14:25] 2026-03-30 23:13:41,470 | INFO     | pgrp: 1700605
[2026-03-30 19:14:25] 2026-03-30 23:13:41,470 | INFO     | corecount: 11
[2026-03-30 19:14:25] 2026-03-30 23:13:41,471 | INFO     | event service: False
[2026-03-30 19:14:25] 2026-03-30 23:13:41,471 | INFO     | sizes: {0: 2281604, 11: 2281604, 9684: 2310287, 9687: 2319543}
[2026-03-30 19:14:25] 2026-03-30 23:13:41,471 | INFO     | --------------------------------------------------
[2026-03-30 19:14:25] 2026-03-30 23:13:41,471 | INFO     | 
[2026-03-30 19:14:25] 2026-03-30 23:13:41,471 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-30 19:14:25] 2026-03-30 23:13:41,488 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,488 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,488 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,488 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,489 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,489 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,489 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,489 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,489 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,489 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,489 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,489 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,489 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,490 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,490 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,490 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,490 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,491 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-30 19:14:25] 2026-03-30 23:13:41,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,491 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-30 19:14:25] 2026-03-30 23:13:41,491 | INFO     | job 7074345289 has completed (purged errors)
[2026-03-30 19:14:25] 2026-03-30 23:13:41,491 | INFO     | overall cleanup function is called
[2026-03-30 19:14:25] 2026-03-30 23:13:42,498 | INFO     | --- collectZombieJob: --- 10, [1700605]
[2026-03-30 19:14:25] 2026-03-30 23:13:42,499 | INFO     | zombie collector waiting for pid 1700605
[2026-03-30 19:14:25] 2026-03-30 23:13:42,499 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-30 19:14:25] 2026-03-30 23:13:42,499 | INFO     | collected zombie processes
[2026-03-30 19:14:25] 2026-03-30 23:13:42,499 | INFO     | will attempt to kill all subprocesses of pid=1700605
[2026-03-30 19:14:25] 2026-03-30 23:13:42,917 | WARNING  | process 1700605 can no longer be monitored (due to stat problems) - aborting
[2026-03-30 19:14:25] 2026-03-30 23:13:43,192 | INFO     | process IDs to be killed: [1700605] (in reverse order)
[2026-03-30 19:14:25] 2026-03-30 23:13:43,290 | WARNING  | found no corresponding commands to process id(s)
[2026-03-30 19:14:25] 2026-03-30 23:13:43,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-30 19:14:25] 2026-03-30 23:13:43,328 | INFO     | did not find any defunct processes belonging to 1700605
[2026-03-30 19:14:25] 2026-03-30 23:13:43,367 | INFO     | did not find any defunct processes belonging to 1700605
[2026-03-30 19:14:25] 2026-03-30 23:13:43,367 | INFO     | Ready for new job
[2026-03-30 19:14:25] 2026-03-30 23:13:43,369 | INFO     | **************************************
[2026-03-30 19:14:25] 2026-03-30 23:13:43,369 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-30 19:14:25] 2026-03-30 23:13:43,369 | INFO     | **************************************
[2026-03-30 19:14:25] 2026-03-30 23:13:43,370 | INFO     | 
[2026-03-30 19:14:25] 2026-03-30 23:13:43,374 | INFO     | architecture information:
[2026-03-30 19:14:25] 2026-03-30 23:13:43,374 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-30 19:14:25] 2026-03-30 23:13:43,374 | INFO     | executing command: cat /etc/os-release
[2026-03-30 19:14:25] 2026-03-30 23:13:43,387 | INFO     | cat /etc/os-release:
[2026-03-30 19:14:25] NAME="CentOS Linux"
[2026-03-30 19:14:25] VERSION="7 (Core)"
[2026-03-30 19:14:25] ID="centos"
[2026-03-30 19:14:25] ID_LIKE="rhel fedora"
[2026-03-30 19:14:25] VERSION_ID="7"
[2026-03-30 19:14:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-30 19:14:25] ANSI_COLOR="0;31"
[2026-03-30 19:14:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-30 19:14:25] HOME_URL="https://www.centos.org/"
[2026-03-30 19:14:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-30 19:14:25] 
[2026-03-30 19:14:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-30 19:14:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-30 19:14:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-30 19:14:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-30 19:14:25] 
[2026-03-30 19:14:25] 2026-03-30 23:13:43,388 | INFO     | **************************************
[2026-03-30 19:14:25] 2026-03-30 23:13:43,676 | INFO     | number of running child processes to parent process 1700605: 1
[2026-03-30 19:14:25] 2026-03-30 23:13:43,676 | INFO     | maximum number of monitored processes: 6
[2026-03-30 19:14:25] 2026-03-30 23:13:43,677 | INFO     | aborting job monitoring since job object (job id=7074345289) has expired
[2026-03-30 19:14:25] 2026-03-30 23:13:43,890 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-30 19:14:25] 2026-03-30 23:13:43,903 | INFO     | sufficient remaining disk space (74858889216 B)
[2026-03-30 19:14:25] 2026-03-30 23:13:43,904 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-30 19:14:25] 2026-03-30 23:13:43,904 | INFO     | current server update state: UPDATING_FINAL
[2026-03-30 19:14:25] 2026-03-30 23:13:43,904 | INFO     | update_server=False
[2026-03-30 19:14:25] 2026-03-30 23:13:43,904 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-30 19:14:25] 2026-03-30 23:13:43,904 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-30 19:14:25] 2026-03-30 23:13:43,904 | INFO     | will abort loop
[2026-03-30 19:14:25] 2026-03-30 23:13:43,939 | INFO     | all data control threads have been joined
[2026-03-30 19:14:25] 2026-03-30 23:13:44,092 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-30 19:14:25] 2026-03-30 23:13:44,140 | INFO     | all payload control threads have been joined
[2026-03-30 19:14:25] 2026-03-30 23:13:44,664 | INFO     | all job control threads have been joined
[2026-03-30 19:14:25] 2026-03-30 23:13:44,909 | INFO     | [job] retrieve thread has finished
[2026-03-30 19:14:25] 2026-03-30 23:13:44,910 | INFO     | [job] job monitor thread has finished
[2026-03-30 19:14:25] 2026-03-30 23:13:44,944 | INFO     | [data] control thread has finished
[2026-03-30 19:14:25] 2026-03-30 23:13:44,982 | INFO     | [payload] failed_post thread has finished
[2026-03-30 19:14:25] 2026-03-30 23:13:45,131 | INFO     | [payload] execute_payloads thread has finished
[2026-03-30 19:14:25] 2026-03-30 23:13:45,145 | INFO     | [payload] control thread has finished
[2026-03-30 19:14:25] 2026-03-30 23:13:45,249 | INFO     | [job] validate thread has finished
[2026-03-30 19:14:25] 2026-03-30 23:13:45,484 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-30 19:14:25] 2026-03-30 23:13:45,669 | INFO     | [job] control thread has finished
[2026-03-30 19:14:25] 2026-03-30 23:13:45,686 | INFO     | [payload] validate_post thread has finished
[2026-03-30 19:14:25] 2026-03-30 23:13:45,766 | INFO     | [job] create_data_payload thread has finished
[2026-03-30 19:14:25] 2026-03-30 23:13:46,097 | INFO     | [data] copytool_out thread has finished
[2026-03-30 19:14:25] 2026-03-30 23:13:46,105 | INFO     | [data] copytool_in thread has finished
[2026-03-30 19:14:25] 2026-03-30 23:13:46,196 | INFO     | [payload] validate_pre thread has finished
[2026-03-30 19:14:25] 2026-03-30 23:13:46,348 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-30 19:14:25] 2026-03-30 23:13:47,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-30 19:14:25] 2026-03-30 23:13:47,353 | INFO     | [job] queue monitor thread has finished
[2026-03-30 19:14:25] 2026-03-30 23:13:51,177 | INFO     | [data] queue_monitor thread has finished
[2026-03-30 19:14:25] 2026-03-30 23:14:13,629 | INFO     | PID=1693356 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-30 19:14:25] 2026-03-30 23:14:13,629 | INFO     | .. there are 15 such processes running
[2026-03-30 19:14:25] 2026-03-30 23:14:13,630 | INFO     | found 0 job(s) in 20 queues
[2026-03-30 19:14:25] 2026-03-30 23:14:13,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-30 19:14:25] 2026-03-30 23:14:13,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-30 19:14:25] 2026-03-30 23:14:19,060 | INFO     | [monitor] cgroup control has ended
[2026-03-30 19:14:25] 2026-03-30 23:14:19,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140315836094272)>', '<ExcThread(monitor, started 140315348420352)>']
[2026-03-30 19:14:25] 2026-03-30 23:14:20,664 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-30 19:14:25] 2026-03-30 23:14:20,664 | INFO     | [monitor] control thread has ended
[2026-03-30 19:14:25] 2026-03-30 23:14:24,915 | INFO     | all workflow threads have been joined
[2026-03-30 19:14:25] 2026-03-30 23:14:24,915 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-30 19:14:25] 2026-03-30 23:14:24,916 | INFO     | traces error code: 0
[2026-03-30 19:14:25] 2026-03-30 23:14:24,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-30 19:14:25] 2026-03-30 23:14:25,026 [wrapper] ==== pilot stdout END ====
[2026-03-30 19:14:25] 2026-03-30 23:14:25,028 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-30 19:14:25] 2026-03-30 23:14:25,030 [wrapper] pilotpid: 1693356
[2026-03-30 19:14:25] 2026-03-30 23:14:25,032 [wrapper] Pilot exit status: 0
[2026-03-30 19:14:25] 2026-03-30 23:14:25,039 [wrapper] pandaids: 7074345289 7074345289
[2026-03-30 19:14:25] 2026-03-30 23:14:25,086 [wrapper] cleanup supervisor_pilot 2154683 1693357
[2026-03-30 19:14:25] 2026-03-30 23:14:25,089 [wrapper] Test setup, not cleaning
[2026-03-30 19:14:25] 2026-03-30 23:14:25,092 [wrapper] apfmon messages muted
[2026-03-30 19:14:25] 2026-03-30 23:14:25,094 [wrapper] ==== wrapper stdout END ====
[2026-03-30 19:14:25] 2026-03-30 23:14:25,096 [wrapper] ==== wrapper stderr END ====
[2026-03-30 19:14:25]  *** Error codes and diagnostics ***
[2026-03-30 19:14:25]     "exeErrorCode": 0,
[2026-03-30 19:14:25]     "pilotErrorCode": 0,
[2026-03-30 19:14:25]  *** Listing of results directory ***
[2026-03-30 19:14:25] total 699156
[2026-03-30 19:14:25] drwx------. 5 boincer umatlas      4096 Mar 25 07:03 pilot3
[2026-03-30 19:14:25] -rw-r--r--. 1 boincer umatlas    644034 Mar 30 12:47 pilot3.tar.gz
[2026-03-30 19:14:25] -rw-r--r--. 1 boincer umatlas      5118 Mar 30 12:48 queuedata.json
[2026-03-30 19:14:25] -rwx------. 1 boincer umatlas     36322 Mar 30 12:48 runpilot2-wrapper.sh
[2026-03-30 19:14:25] -rw-r--r--. 1 boincer umatlas       100 Mar 30 15:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-30 19:14:25] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 30 15:37 run_atlas
[2026-03-30 19:14:25] -rw-r--r--. 1 boincer umatlas       105 Mar 30 15:37 job.xml
[2026-03-30 19:14:25] -rw-r--r--. 3 boincer umatlas 262955622 Mar 30 15:37 EVNT.49474375._000007.pool.root.1
[2026-03-30 19:14:25] -rw-r--r--. 3 boincer umatlas 262955622 Mar 30 15:37 ATLAS.root_0
[2026-03-30 19:14:25] -rw-r--r--. 2 boincer umatlas     15845 Mar 30 15:37 start_atlas.sh
[2026-03-30 19:14:25] drwxrwx--x. 2 boincer umatlas      4096 Mar 30 15:37 shared
[2026-03-30 19:14:25] -rw-r--r--. 2 boincer umatlas    656738 Mar 30 15:37 input.tar.gz
[2026-03-30 19:14:25] -rw-r--r--. 1 boincer umatlas         0 Mar 30 15:37 boinc_lockfile
[2026-03-30 19:14:25] -rw-r--r--. 1 boincer umatlas      2586 Mar 30 16:31 pandaJob.out
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas        57 Mar 30 16:31 setup.sh.local
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas   1004000 Mar 30 16:32 agis_schedconf.cvmfs.json
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas       441 Mar 30 16:32 workernode_map.json
[2026-03-30 19:14:25] -rw-r--r--. 1 boincer umatlas      6844 Mar 30 19:12 init_data.xml
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas 183421587 Mar 30 19:13 HITS.49499571._000169.pool.root.1
[2026-03-30 19:14:25] -rw-r--r--. 1 boincer umatlas       530 Mar 30 19:13 boinc_task_state.xml
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas      1040 Mar 30 19:13 memory_monitor_summary.json
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas   1511579 Mar 30 19:13 agis_ddmendpoints.agis.ALL.json
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas    400099 Mar 30 19:13 log.49499571._000169.job.log.tgz.1
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas      6396 Mar 30 19:13 heartbeat_new.json
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas      6287 Mar 30 19:13 heartbeat.json
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas        96 Mar 30 19:14 pilot_heartbeat.json
[2026-03-30 19:14:25] -rw-r--r--. 1 boincer umatlas      8192 Mar 30 19:14 boinc_mmap_file
[2026-03-30 19:14:25] -rw-r--r--. 1 boincer umatlas        28 Mar 30 19:14 wrapper_checkpoint.txt
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas      5226 Mar 30 19:14 pilotlog.txt
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas    859623 Mar 30 19:14 log.49499571._000169.job.log.1
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas       357 Mar 30 19:14 output.list
[2026-03-30 19:14:25] -rw-r--r--. 1 boincer umatlas       620 Mar 30 19:14 runtime_log
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas   1280000 Mar 30 19:14 result.tar.gz
[2026-03-30 19:14:25] -rw-r--r--. 1 boincer umatlas      9433 Mar 30 19:14 runtime_log.err
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas       780 Mar 30 19:14 48MKDmmxUR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmRCQKDmumdAkm.diag
[2026-03-30 19:14:25] -rw-r--r--. 1 boincer umatlas     23422 Mar 30 19:14 stderr.txt
[2026-03-30 19:14:25] HITS file was successfully produced:
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas 183421587 Mar 30 19:13 shared/HITS.pool.root.1
[2026-03-30 19:14:25]  *** Contents of shared directory: ***
[2026-03-30 19:14:25] total 437840
[2026-03-30 19:14:25] -rw-r--r--. 3 boincer umatlas 262955622 Mar 30 15:37 ATLAS.root_0
[2026-03-30 19:14:25] -rw-r--r--. 2 boincer umatlas     15845 Mar 30 15:37 start_atlas.sh
[2026-03-30 19:14:25] -rw-r--r--. 2 boincer umatlas    656738 Mar 30 15:37 input.tar.gz
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas 183421587 Mar 30 19:13 HITS.pool.root.1
[2026-03-30 19:14:25] -rw-------. 1 boincer umatlas   1280000 Mar 30 19:14 result.tar.gz
19:14:47 (1682290): run_atlas exited; CPU time 41898.983782
19:14:47 (1682290): called boinc_finish(0)

</stderr_txt>
]]>

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