Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:52:41 (1083474): wrapper (7.7.26015): starting
01:52:41 (1083474): wrapper: running run_atlas (--nthreads 12)
[2026-04-04 01:52:41] Arguments: --nthreads 12
[2026-04-04 01:52:41] Threads: 12
[2026-04-04 01:52:41] Checking for CVMFS
[2026-04-04 01:52:41] No cvmfs_config command found, will try listing directly
[2026-04-04 01:52:41] CVMFS is ok
[2026-04-04 01:52:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-04 01:52:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-04 01:52:41] Further information can be found at the LHC@home message board.
[2026-04-04 01:52:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-04 01:52:41] Checking for apptainer binary...
[2026-04-04 01:52:41] which: no apptainer in ((null))
[2026-04-04 01:52:41] apptainer is not installed, using version from CVMFS
[2026-04-04 01:52:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-04 01:52:41] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-04-04 01:52:41] apptainer works
[2026-04-04 01:52:42] Set ATHENA_PROC_NUMBER=12
[2026-04-04 01:52:42] Set ATHENA_CORE_NUMBER=12
[2026-04-04 01:52:42] Starting ATLAS job with PandaID=7074314274
[2026-04-04 01:52:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-04 02:13:55]  *** The last 200 lines of the pilot log: ***
[2026-04-04 02:13:55]  filesize=340128
[2026-04-04 02:13:55]  filetype=log
[2026-04-04 02:13:55]  guid=583cb11a-ce6e-4ea6-abd1-f499b20a6001
[2026-04-04 02:13:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-04 02:13:55]  is_altstaged=None
[2026-04-04 02:13:55]  is_tar=False
[2026-04-04 02:13:55]  lfn=log.49499762._000174.job.log.tgz.1
[2026-04-04 02:13:55]  mtime=0
[2026-04-04 02:13:55]  protocol_id=None
[2026-04-04 02:13:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-04 02:13:55]  replicas=None
[2026-04-04 02:13:55]  scope=mc23_13p6TeV
[2026-04-04 02:13:55]  status=None
[2026-04-04 02:13:55]  status_code=0
[2026-04-04 02:13:55]  storage_token=
[2026-04-04 02:13:55]  surl=/var/lib/boinc/var/slot48/slots/7/PanDA_Pilot-7074314274/log.49499762._000174.job.log.tgz.1
[2026-04-04 02:13:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/54/log.49499762._000174.job.log.tgz.1
[2026-04-04 02:13:55]  workdir=None
[2026-04-04 02:13:55] ]
[2026-04-04 02:13:55] 2026-04-04 00:13:07,159 | INFO     | transferring file log.49499762._000174.job.log.tgz.1 from /var/lib/boinc/var/slot48/slots/7/PanDA_Pilot-7074314274/log.49499762._000174.job.log.tgz.1 to /var/lib/b
[2026-04-04 02:13:55] 2026-04-04 00:13:07,159 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot48/slots/7/PanDA_Pilot-7074314274/log.49499762._000174.job.log.tgz.1 /var/lib/boinc/var/slot48/slots/7/lo
[2026-04-04 02:13:55] 2026-04-04 00:13:07,170 | INFO     | adding to output.list: log.49499762._000174.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/54/log.49499762._000174.job.log.tg
[2026-04-04 02:13:55] 2026-04-04 00:13:07,170 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-04 02:13:55] 2026-04-04 00:13:07,170 | INFO     | summary of transferred files:
[2026-04-04 02:13:55] 2026-04-04 00:13:07,170 | INFO     |  -- lfn=log.49499762._000174.job.log.tgz.1, status_code=0, status=transferred
[2026-04-04 02:13:55] 2026-04-04 00:13:07,170 | INFO     | stage-out finished correctly
[2026-04-04 02:13:55] 2026-04-04 00:13:07,239 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-04 02:13:55] 2026-04-04 00:13:09,170 | INFO     | job 7074314274 has state=finished
[2026-04-04 02:13:55] 2026-04-04 00:13:09,171 | INFO     | preparing for final server update for job 7074314274 in state='finished'
[2026-04-04 02:13:55] 2026-04-04 00:13:09,171 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/7/PanDA_Pilot-7074314274/jobReport.json
[2026-04-04 02:13:55] 2026-04-04 00:13:09,172 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/7/workernode_map.json
[2026-04-04 02:13:55] 2026-04-04 00:13:09,172 | INFO     | this job has now completed (state=finished)
[2026-04-04 02:13:55] 2026-04-04 00:13:09,172 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-04 02:13:55] 2026-04-04 00:13:09,172 | INFO     | log transfer has been attempted: DONE
[2026-04-04 02:13:55] 2026-04-04 00:13:09,172 | INFO     | job 7074314274 has finished - writing final server update
[2026-04-04 02:13:55] 2026-04-04 00:13:09,173 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1046867/.job.ad'
[2026-04-04 02:13:55] 2026-04-04 00:13:09,173 | INFO     | total number of processed events: 400 (read)
[2026-04-04 02:13:55] 2026-04-04 00:13:09,187 | INFO     | using path: /var/lib/boinc/var/slot48/slots/7/PanDA_Pilot-7074314274/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 02:13:55] 2026-04-04 00:13:09,187 | INFO     | extracted standard info from prmon json
[2026-04-04 02:13:55] 2026-04-04 00:13:09,187 | INFO     | extracted standard memory fields from prmon json
[2026-04-04 02:13:55] 2026-04-04 00:13:09,187 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-04 02:13:55] 2026-04-04 00:13:09,187 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-04 02:13:55] 2026-04-04 00:13:09,187 | INFO     | fitting pss+swap vs Time
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | sum of square deviations: 677222.0
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | sum of deviations: 309147512.0
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | mean x (centered): 0.0
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | mean y: 3089803.153846154
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | intersect: 3089803.153846154
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | chi2: 0.0051460365857239525
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | current memory leak: 456.49 B/s (using 13 data points, chi2=0.01)
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | could have reported an average CPU frequency of 3583 MHz (4 samples)
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | ..............................
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | . Timing measurements:
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | . get job = 0 s
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | . initial setup = 3 s
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | . payload setup = 3 s
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | . stage-in = 0 s
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | . payload execution = 1202 s
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | . stage-out = 0 s
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | . log creation = 0 s
[2026-04-04 02:13:55] 2026-04-04 00:13:09,188 | INFO     | ..............................
[2026-04-04 02:13:55] 2026-04-04 00:13:09,595 | INFO     | 
[2026-04-04 02:13:55] 2026-04-04 00:13:09,595 | INFO     | job summary report
[2026-04-04 02:13:55] 2026-04-04 00:13:09,595 | INFO     | --------------------------------------------------
[2026-04-04 02:13:55] 2026-04-04 00:13:09,595 | INFO     | PanDA job id: 7074314274
[2026-04-04 02:13:55] 2026-04-04 00:13:09,595 | INFO     | task id: 49499762
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | errors: (none)
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | pilot state: finished 
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | transexitcode: 0
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | exeerrorcode: 0
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | exeerrordiag: 
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | exitcode: 0
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | exitmsg: OK
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | cpuconsumptiontime: 12963 s
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | nevents: 400
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | neventsw: 0
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | pid: 1093982
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | pgrp: 1093982
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | corecount: 12
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | event service: False
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | sizes: {0: 2281608, 11: 2281608, 1207: 2315256, 1209: 2315394}
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | --------------------------------------------------
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | 
[2026-04-04 02:13:55] 2026-04-04 00:13:09,596 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/7
[2026-04-04 02:13:55] 2026-04-04 00:13:09,610 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | job 7074314274 has completed (purged errors)
[2026-04-04 02:13:55] 2026-04-04 00:13:09,611 | INFO     | overall cleanup function is called
[2026-04-04 02:13:55] 2026-04-04 00:13:10,618 | INFO     | --- collectZombieJob: --- 10, [1093982]
[2026-04-04 02:13:55] 2026-04-04 00:13:10,619 | INFO     | zombie collector waiting for pid 1093982
[2026-04-04 02:13:55] 2026-04-04 00:13:10,619 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-04 02:13:55] 2026-04-04 00:13:10,619 | INFO     | collected zombie processes
[2026-04-04 02:13:55] 2026-04-04 00:13:10,619 | INFO     | will attempt to kill all subprocesses of pid=1093982
[2026-04-04 02:13:55] 2026-04-04 00:13:10,810 | INFO     | process IDs to be killed: [1093982] (in reverse order)
[2026-04-04 02:13:55] 2026-04-04 00:13:10,891 | WARNING  | found no corresponding commands to process id(s)
[2026-04-04 02:13:55] 2026-04-04 00:13:10,891 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-04 02:13:55] 2026-04-04 00:13:10,907 | INFO     | did not find any defunct processes belonging to 1093982
[2026-04-04 02:13:55] 2026-04-04 00:13:10,918 | INFO     | did not find any defunct processes belonging to 1093982
[2026-04-04 02:13:55] 2026-04-04 00:13:10,918 | INFO     | Ready for new job
[2026-04-04 02:13:55] 2026-04-04 00:13:10,919 | INFO     | **************************************
[2026-04-04 02:13:55] 2026-04-04 00:13:10,919 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-04 02:13:55] 2026-04-04 00:13:10,919 | INFO     | **************************************
[2026-04-04 02:13:55] 2026-04-04 00:13:10,919 | INFO     | 
[2026-04-04 02:13:55] 2026-04-04 00:13:10,922 | INFO     | architecture information:
[2026-04-04 02:13:55] 2026-04-04 00:13:10,923 | INFO     | executing command: cat /etc/os-release
[2026-04-04 02:13:55] 2026-04-04 00:13:10,933 | INFO     | cat /etc/os-release:
[2026-04-04 02:13:55] NAME="CentOS Linux"
[2026-04-04 02:13:55] VERSION="7 (Core)"
[2026-04-04 02:13:55] ID="centos"
[2026-04-04 02:13:55] ID_LIKE="rhel fedora"
[2026-04-04 02:13:55] VERSION_ID="7"
[2026-04-04 02:13:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-04 02:13:55] ANSI_COLOR="0;31"
[2026-04-04 02:13:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-04 02:13:55] HOME_URL="https://www.centos.org/"
[2026-04-04 02:13:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-04 02:13:55] 
[2026-04-04 02:13:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-04 02:13:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-04 02:13:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-04 02:13:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-04 02:13:55] 
[2026-04-04 02:13:55] 2026-04-04 00:13:10,933 | INFO     | **************************************
[2026-04-04 02:13:55] 2026-04-04 00:13:11,436 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/7
[2026-04-04 02:13:55] 2026-04-04 00:13:11,449 | INFO     | sufficient remaining disk space (331992793088 B)
[2026-04-04 02:13:55] 2026-04-04 00:13:11,449 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-04 02:13:55] 2026-04-04 00:13:11,449 | INFO     | current server update state: UPDATING_FINAL
[2026-04-04 02:13:55] 2026-04-04 00:13:11,449 | INFO     | update_server=False
[2026-04-04 02:13:55] 2026-04-04 00:13:11,449 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-04 02:13:55] 2026-04-04 00:13:11,483 | INFO     | all data control threads have been joined
[2026-04-04 02:13:55] 2026-04-04 00:13:11,582 | INFO     | all payload control threads have been joined
[2026-04-04 02:13:55] 2026-04-04 00:13:12,455 | INFO     | [job] retrieve thread has finished
[2026-04-04 02:13:55] 2026-04-04 00:13:12,488 | INFO     | [data] control thread has finished
[2026-04-04 02:13:55] 2026-04-04 00:13:12,588 | INFO     | [payload] control thread has finished
[2026-04-04 02:13:55] 2026-04-04 00:13:12,700 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-04 02:13:55] 2026-04-04 00:13:12,715 | INFO     | [payload] validate_post thread has finished
[2026-04-04 02:13:55] 2026-04-04 00:13:12,876 | INFO     | all job control threads have been joined
[2026-04-04 02:13:55] 2026-04-04 00:13:13,022 | INFO     | [payload] failed_post thread has finished
[2026-04-04 02:13:55] 2026-04-04 00:13:13,272 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-04 02:13:55] 2026-04-04 00:13:13,567 | INFO     | [job] validate thread has finished
[2026-04-04 02:13:55] 2026-04-04 00:13:13,584 | INFO     | [job] create_data_payload thread has finished
[2026-04-04 02:13:55] 2026-04-04 00:13:13,641 | INFO     | [payload] validate_pre thread has finished
[2026-04-04 02:13:55] 2026-04-04 00:13:13,749 | INFO     | [data] copytool_in thread has finished
[2026-04-04 02:13:55] 2026-04-04 00:13:13,882 | INFO     | [job] control thread has finished
[2026-04-04 02:13:55] 2026-04-04 00:13:13,892 | INFO     | [payload] execute_payloads thread has finished
[2026-04-04 02:13:55] 2026-04-04 00:13:14,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-04 02:13:55] 2026-04-04 00:13:14,705 | INFO     | [data] copytool_out thread has finished
[2026-04-04 02:13:55] 2026-04-04 00:13:15,243 | INFO     | [job] queue monitor thread has finished
[2026-04-04 02:13:55] 2026-04-04 00:13:16,974 | WARNING  | process 1093982 can no longer be monitored (due to stat problems) - aborting
[2026-04-04 02:13:55] 2026-04-04 00:13:17,109 | INFO     | using path: /var/lib/boinc/var/slot48/slots/7/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 02:13:55] 2026-04-04 00:13:17,268 | INFO     | number of running child processes to parent process 1093982: 1
[2026-04-04 02:13:55] 2026-04-04 00:13:17,268 | INFO     | maximum number of monitored processes: 6
[2026-04-04 02:13:55] 2026-04-04 00:13:17,268 | INFO     | aborting job monitoring since job object (job id=7074314274) has expired
[2026-04-04 02:13:55] 2026-04-04 00:13:17,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-04 02:13:55] 2026-04-04 00:13:17,268 | INFO     | will abort loop
[2026-04-04 02:13:55] 2026-04-04 00:13:17,278 | INFO     | [data] queue_monitor thread has finished
[2026-04-04 02:13:55] 2026-04-04 00:13:18,273 | INFO     | [job] job monitor thread has finished
[2026-04-04 02:13:55] 2026-04-04 00:13:21,644 | INFO     | job.realtimelogging is not enabled
[2026-04-04 02:13:55] 2026-04-04 00:13:22,649 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-04 02:13:55] 2026-04-04 00:13:42,639 | INFO     | PID=1088243 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-04 02:13:55] 2026-04-04 00:13:42,639 | INFO     | found 0 job(s) in 20 queues
[2026-04-04 02:13:55] 2026-04-04 00:13:42,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-04 02:13:55] 2026-04-04 00:13:42,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-04 02:13:55] 2026-04-04 00:13:50,548 | INFO     | [monitor] cgroup control has ended
[2026-04-04 02:13:55] 2026-04-04 00:13:50,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22474503198528)>', '<ExcThread(monitor, started 22474262849280)>']
[2026-04-04 02:13:55] 2026-04-04 00:13:50,680 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-04 02:13:55] 2026-04-04 00:13:50,680 | INFO     | [monitor] control thread has ended
[2026-04-04 02:13:55] 2026-04-04 00:13:55,595 | INFO     | all workflow threads have been joined
[2026-04-04 02:13:55] 2026-04-04 00:13:55,596 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-04 02:13:55] 2026-04-04 00:13:55,596 | INFO     | traces error code: 0
[2026-04-04 02:13:55] 2026-04-04 00:13:55,596 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-04 02:13:55] 2026-04-04 00:13:55,655 [wrapper] ==== pilot stdout END ====
[2026-04-04 02:13:55] 2026-04-04 00:13:55,657 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-04 02:13:55] 2026-04-04 00:13:55,659 [wrapper] pilotpid: 1088243
[2026-04-04 02:13:55] 2026-04-04 00:13:55,660 [wrapper] Pilot exit status: 0
[2026-04-04 02:13:55] 2026-04-04 00:13:55,667 [wrapper] pandaids: 7074314274
[2026-04-04 02:13:55] 2026-04-04 00:13:55,727 [wrapper] cleanup supervisor_pilot 1114328 1088244
[2026-04-04 02:13:55] 2026-04-04 00:13:55,730 [wrapper] Test setup, not cleaning
[2026-04-04 02:13:55] 2026-04-04 00:13:55,732 [wrapper] apfmon messages muted
[2026-04-04 02:13:55] 2026-04-04 00:13:55,733 [wrapper] ==== wrapper stdout END ====
[2026-04-04 02:13:55] 2026-04-04 00:13:55,734 [wrapper] ==== wrapper stderr END ====
[2026-04-04 02:13:55]  *** Error codes and diagnostics ***
[2026-04-04 02:13:55]     "exeErrorCode": 0,
[2026-04-04 02:13:55]     "pilotErrorCode": 0,
[2026-04-04 02:13:55]  *** Listing of results directory ***
[2026-04-04 02:13:55] total 450920
[2026-04-04 02:13:55] -rw-r--r--. 1 boinc boinc    644034 Mar 30 17:50 pilot3.tar.gz
[2026-04-04 02:13:55] -rwx------. 1 boinc boinc     36322 Mar 30 17:53 runpilot2-wrapper.sh
[2026-04-04 02:13:55] -rw-r--r--. 1 boinc boinc      5118 Mar 30 17:55 queuedata.json
[2026-04-04 02:13:55] -rw-r--r--. 1 boinc boinc       100 Apr  4 01:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-04 02:13:55] -rwxr-xr-x. 1 boinc boinc      7986 Apr  4 01:52 run_atlas
[2026-04-04 02:13:55] -rw-r--r--. 1 boinc boinc       105 Apr  4 01:52 job.xml
[2026-04-04 02:13:55] -rw-r--r--. 2 boinc boinc     15845 Apr  4 01:52 start_atlas.sh
[2026-04-04 02:13:55] drwxrwx--x. 2 boinc boinc      4096 Apr  4 01:52 shared
[2026-04-04 02:13:55] -rw-r--r--. 2 boinc boinc    656745 Apr  4 01:52 input.tar.gz
[2026-04-04 02:13:55] -rw-r--r--. 1 boinc boinc      6708 Apr  4 01:52 init_data.xml
[2026-04-04 02:13:55] -rw-r--r--. 2 boinc boinc 266582209 Apr  4 01:52 EVNT.49474669._000007.pool.root.1
[2026-04-04 02:13:55] -rw-r--r--. 1 boinc boinc         0 Apr  4 01:52 boinc_lockfile
[2026-04-04 02:13:55] -rw-r--r--. 1 boinc boinc      2581 Apr  4 01:52 pandaJob.out
[2026-04-04 02:13:55] -rw-------. 1 boinc boinc   1005173 Apr  4 01:52 agis_schedconf.cvmfs.json
[2026-04-04 02:13:55] -rw-------. 1 boinc boinc   1511579 Apr  4 01:52 agis_ddmendpoints.agis.ALL.json
[2026-04-04 02:13:55] -rw-------. 1 boinc boinc       442 Apr  4 01:52 workernode_map.json
[2026-04-04 02:13:55] drwx------. 5 boinc boinc      4096 Apr  4 01:52 pilot3
[2026-04-04 02:13:55] -rw-r--r--. 1 boinc boinc       529 Apr  4 02:12 boinc_task_state.xml
[2026-04-04 02:13:55] -rw-------. 1 boinc boinc 190086363 Apr  4 02:12 HITS.49499762._000174.pool.root.1
[2026-04-04 02:13:55] -rw-------. 1 boinc boinc        95 Apr  4 02:13 pilot_heartbeat.json
[2026-04-04 02:13:55] -rw-------. 1 boinc boinc      1022 Apr  4 02:13 memory_monitor_summary.json
[2026-04-04 02:13:55] -rw-------. 1 boinc boinc    340128 Apr  4 02:13 log.49499762._000174.job.log.tgz.1
[2026-04-04 02:13:55] -rw-------. 1 boinc boinc      6361 Apr  4 02:13 heartbeat_new.json
[2026-04-04 02:13:55] -rw-------. 1 boinc boinc      6252 Apr  4 02:13 heartbeat.json
[2026-04-04 02:13:55] -rw-r--r--. 1 boinc boinc      8192 Apr  4 02:13 boinc_mmap_file
[2026-04-04 02:13:55] -rw-r--r--. 1 boinc boinc        27 Apr  4 02:13 wrapper_checkpoint.txt
[2026-04-04 02:13:55] -rw-------. 1 boinc boinc      5357 Apr  4 02:13 pilotlog.txt
[2026-04-04 02:13:55] -rw-------. 1 boinc boinc    161951 Apr  4 02:13 log.49499762._000174.job.log.1
[2026-04-04 02:13:55] -rw-------. 1 boinc boinc       357 Apr  4 02:13 output.list
[2026-04-04 02:13:55] -rw-r--r--. 1 boinc boinc       620 Apr  4 02:13 runtime_log
[2026-04-04 02:13:55] -rw-------. 1 boinc boinc    522240 Apr  4 02:13 result.tar.gz
[2026-04-04 02:13:55] -rw-r--r--. 1 boinc boinc      9206 Apr  4 02:13 runtime_log.err
[2026-04-04 02:13:55] -rw-------. 1 boinc boinc       657 Apr  4 02:13 YupMDm96TR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmv8PKDm88UoOo.diag
[2026-04-04 02:13:55] -rw-r--r--. 1 boinc boinc     21007 Apr  4 02:13 stderr.txt
[2026-04-04 02:13:55] HITS file was successfully produced:
[2026-04-04 02:13:55] -rw-------. 1 boinc boinc 190086363 Apr  4 02:12 shared/HITS.pool.root.1
[2026-04-04 02:13:55]  *** Contents of shared directory: ***
[2026-04-04 02:13:55] total 447144
[2026-04-04 02:13:55] -rw-r--r--. 2 boinc boinc     15845 Apr  4 01:52 start_atlas.sh
[2026-04-04 02:13:55] -rw-r--r--. 2 boinc boinc    656745 Apr  4 01:52 input.tar.gz
[2026-04-04 02:13:55] -rw-r--r--. 2 boinc boinc 266582209 Apr  4 01:52 ATLAS.root_0
[2026-04-04 02:13:55] -rw-------. 1 boinc boinc 190086363 Apr  4 02:12 HITS.pool.root.1
[2026-04-04 02:13:55] -rw-------. 1 boinc boinc    522240 Apr  4 02:13 result.tar.gz
02:13:57 (1083474): run_atlas exited; CPU time 12972.254920
02:13:57 (1083474): called boinc_finish(0)

</stderr_txt>
]]>

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